BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764469|ref|YP_003064807.2| putative permease protein [Candidatus Liberibacter asiaticus str. psy62] (361 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|163746449|ref|ZP_02153807.1| permease YjgP/YjgQ family, putative [Oceanibulbus indolifex HEL-45] gi|161380334|gb|EDQ04745.1| permease YjgP/YjgQ family, putative [Oceanibulbus indolifex HEL-45] Length = 365 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 82/366 (22%), Positives = 162/366 (44%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + + + + LV ++D + + + + + + +P I Sbjct: 2 ILHFYFARRFFTSFMVITAVLAALVMLVDGVDQARRFAD-DDVGWDQVLGMTLLNMPQTI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ + +F L R+SE+V++RA G S + L VV ++++G V V+NPI Sbjct: 61 NMILPLIMILATVALFIGLARSSEMVVTRAAGRSALRALVAPVVVALIIGTLAVAVLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + L Q+++ NG SD W++ + I A + + + + T Sbjct: 121 VAATSERSEQLTQKYRSNGSSALSVSDEGLWLRQGTEEGQSVIRAWRTNSDASVLYNVTI 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI------DKNSTTLNIPIKMD 235 I+ D + I R +A+ A + +L + + + T+ + ++ Sbjct: 181 ISYDAEKGPIRRIEAESAQLSGGDWQLTGAKIWPLEAGVNAEGAAEEHETLTIPSSLTVE 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 ++ + A+ S YE+ + + ++ F + E + P LVAM L+A++ + Sbjct: 241 RIRESIARVAAVSIYELPEFIRQLEQAG-FSTRQHEVWLQAELARPFFLVAMVLVASAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V I GF LY I + + G++G + AA P + I L++ +L Sbjct: 300 MRHTRFGGTGVAVLASILLGFGLYFIRSFAQILGENGQIPVTLAAWAPPVAAIFLALGLL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHAEDG 365 >gi|89070357|ref|ZP_01157664.1| putative permease [Oceanicola granulosus HTCC2516] gi|89044004|gb|EAR50179.1| putative permease [Oceanicola granulosus HTCC2516] Length = 366 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 80/366 (21%), Positives = 148/366 (40%), Gaps = 9/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + YL + L +L+ +DL E N++ + S L P + Sbjct: 2 ILHRYFARRYLTSFLTVSGLFFVLLGAMDLVEQANEVSDEAAARWSDVLALTLLNAPASL 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ I +F L R+SELV++RA G S L V+ L+G + V+NP+ Sbjct: 62 YEILPLLVILSTIALFLGLARSSELVVTRAAGRSALHALVAPVLVVALIGAVALAVLNPL 121 Query: 124 ATSGEKIGIDLIQ--QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K + + + W++ P+ I A + + T Sbjct: 122 VAATSKEYEARVSALEDRGASIVSVDAGGLWLRQGGPEGQSVIRAARANTDGTELSGVTF 181 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPIKMD 235 IT ++ + R DA A + +L + + + + + + Sbjct: 182 ITFAEEGRPSRRIDARRARLEAGVWRLVEAKSWPLGDAGVPEAAAEEHDVYEVATSLTAA 241 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +S +E+ + + + F R + + P LVAM LI A+ + Sbjct: 242 QIRDSFGAPSSIPIWELPRFIDRLQTAG-FSARRHQVWLQTELAKPAFLVAMLLIGAAFT 300 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + R + ++ I F LY + + G++G + + AA P + I+ S+ +L Sbjct: 301 MRHQRGGRTGLMALVAILLSFGLYFLRNFAQILGENGQIPVLLAAWAPPLAGIAASVALL 360 Query: 356 LQKEDG 361 L KEDG Sbjct: 361 LHKEDG 366 >gi|260427738|ref|ZP_05781717.1| permease, YjgP/YjgQ family [Citreicella sp. SE45] gi|260422230|gb|EEX15481.1| permease, YjgP/YjgQ family [Citreicella sp. SE45] Length = 364 Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 165/366 (45%), Gaps = 11/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + + + L I V ++DL E + G + S ++ + A R+P + Sbjct: 2 ILHRYFARRFFWMFMSILSVFAIFVGLVDLVEQIRKFG--GDISFAQKVQITALRLPEGM 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ +F L R+SELV+ RA G S L ++ ++ + TV ++NP+ Sbjct: 60 YEILPLVMILATAALFLMLARSSELVVVRAAGRSGLTALMGPMMVALAISGVTVAMLNPL 119 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K DL + ++++G W++ + I A + P+ + D + Sbjct: 120 VAATSKRASDLAESYENDGASVISIGKEGLWLRQGSSDGQAVIRAARANPDATVLYDVSF 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIKMD 235 + + I R +A A + + L+ + + + + + Sbjct: 180 LQYAEDGGPIRRVEAAEAALEDGAWALRDAKVWPLGTRANPEAAAERHDRLRIASDLTQN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + ++ + +++ ++ ++ F R E F + P+ LVAM L+AA + Sbjct: 240 DIRDRFGKPSAVAIWDLPDFINGLEQAG-FSARRHEVWFQMELARPIFLVAMVLVAAGFT 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + + V + GF LY + + G++G L P+ AA +P + ++ L++ ++ Sbjct: 299 MRPARLGRTGLYVLAAVLLGFGLYYVRNFAQIMGENGQLPPLFAAWVPPVASLMLALGLV 358 Query: 356 LQKEDG 361 LQ EDG Sbjct: 359 LQMEDG 364 >gi|220925666|ref|YP_002500968.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] gi|219950273|gb|ACL60665.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] Length = 362 Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 88/358 (24%), Positives = 153/358 (42%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY L+ L LV+ +D E+ + GE A L+ R P I Sbjct: 6 TLGRYIAGRLLRMIAGVFLTVFALVYTLDFVELMRRAGETQGIGALTVARLSLLRTPSIA 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +QI+PF L + L+R ELV++RA GIS WQ L P V ++ +G V NP+ Sbjct: 66 EQIMPFAILFGAMGALLQLSRKLELVVARAAGISAWQFLQPGVFVALAVGALMVGAYNPM 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + ++ ++ + ++ S W++ + + A+ + + Sbjct: 126 AAALKQHSTEIEARIFSRSNRGGSGKDLWIRQRSVDGQAIVRAETAIEGTTTLAGVSVFA 185 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + + +A A +++ +L+ P ++ + + ++ Sbjct: 186 FDDQGTFTQQIEARQATLHDGYWELQDARVLAKDSQPESYDTYLVASNLVPSQVRQRFTP 245 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S F+++ ++ S ++ R Q L+ P++ VAM L+AASVSL F R Sbjct: 246 PDSVPFWQLGDTIARSERAG-LDATRYRLQRAVLLARPMLFVAMVLVAASVSLRFFRFGG 304 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + G+ +GF LY +M+ G SGI+ AA P ++ L L LL +EDG Sbjct: 305 IGRMALAGVAAGFALYVARQVMEGLGASGIVAAPVAAWFPAVVGSLLGTLALLYQEDG 362 >gi|170743204|ref|YP_001771859.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] gi|168197478|gb|ACA19425.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] Length = 362 Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 155/358 (43%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY +L+ L LV+ +D E+ + GE P S A L+ R P + Sbjct: 6 TLGRYIAARFLRMIAGVFLTVFALVYTLDFVELMRRAGEAPGASALTVAHLSLLRTPAVA 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +QI+PF L + L+R ELV++RA GIS WQ L P V+ ++ +G V NP+ Sbjct: 66 EQIMPFAILFGAMGALLQLSRKLELVVARAAGISAWQFLQPGVLVAVGIGALMVGAYNPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A S ++ + + K W++ + + A + T T Sbjct: 126 AASLKQRSTQVEARIFARSTKGGLSNDLWIRQRSVDGQAIVRASTAIEGTTSLAGVTIFT 185 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + + +A A +++ +L+ P ++ + + ++ Sbjct: 186 FDAQGAFGQQIEARRATLHDGYWELQDARVLTQDSGPESYDTYLVASNLAPSQVRQRVTP 245 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S F+++ + ++ S ++ R Q L+ P++ VAM L+AASVSL F R Sbjct: 246 PDSVPFWQLSETIARSERAG-LDAARYRLQRAVLLARPMLFVAMVLVAASVSLRFFRFGG 304 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + G+ +GF LY +M+ G SGI+ AA P ++ L L LL +EDG Sbjct: 305 IGRMALAGVAAGFALYVARQVMEGLGASGIVAAPVAAWFPAVVGSLLGTLALLYQEDG 362 >gi|56697305|ref|YP_167671.1| YjgP/YjgQ family permease [Ruegeria pomeroyi DSS-3] gi|56679042|gb|AAV95708.1| permease, YjgP/YjgQ family [Ruegeria pomeroyi DSS-3] Length = 365 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + ++++ L L + LV +IDL E + E S+ + L P I Sbjct: 2 ILDRYFARRFIQSFLVIGLVFLGLVLLIDLIEQLRRF-EGFEVSMGQLVGLTLLNAPAAI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ IV+F L R+SELV++RAIG S + L V+ ++++G+ V +NPI Sbjct: 61 SEILPLLMILSTIVLFVGLARSSELVVTRAIGRSGIRALVGPVLVALVIGLLAVTTLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + L +++ G SD W++ + I A + D T Sbjct: 121 VAATAVRYQTLADTYRNGGPSVLSLSDEGLWLRQGDAGGQSVIHATGFGGDGVTLFDVTI 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIKMD 235 ++ R A+ A + + K L+K + + + + + + Sbjct: 181 LSYAPDGSAQRRTIAESAQLQDGKWLLQKAKVWPLKVGQNPEANAVYHDRIEMPTSLTQE 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + + S Y++ + + ++ F R + + PL LV+M L+ A+ + Sbjct: 241 RIRDSLGRRETVSIYDLPQTIEQLQQAG-FSTKRHKVWLQVELARPLFLVSMVLVGAAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V + GF LY + G++G + AA P + I L+ +L Sbjct: 300 MRHTRFGGTGLAVLSAVLLGFTLYFTRNFAQILGENGQIPVALAAWAPPVAAIMLTFGLL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHAEDG 365 >gi|77463458|ref|YP_352962.1| putative permease [Rhodobacter sphaeroides 2.4.1] gi|221639316|ref|YP_002525578.1| permease Yjgp/YjgQ family protein [Rhodobacter sphaeroides KD131] gi|332558335|ref|ZP_08412657.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides WS8N] gi|77387876|gb|ABA79061.1| putative permease [Rhodobacter sphaeroides 2.4.1] gi|221160097|gb|ACM01077.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides KD131] gi|332276047|gb|EGJ21362.1| Permease YjgP/YjgQ family protein precursor [Rhodobacter sphaeroides WS8N] Length = 364 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 148/365 (40%), Gaps = 9/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + +L+ L L+ +ID+ + + + ++ + +L+ RVP + Sbjct: 2 ILSRYIARRFLRMVFIVFLAFFGLMMLIDVLDQMRRFSD-EGITLVQAGLLSLLRVPATL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ + +F L R+SELV+ RA G S + L +V ++ LG V V+NPI Sbjct: 61 YTILPLIVILAAVALFLGLARSSELVVVRAAGRSGLRFLVAPMVVALALGTVAVTVLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + S W++ + I A + + T Sbjct: 121 VAGTSRQYDAAAGRLARGEASILSISKEGLWLRQGGSGEQTVIHALRSNTDGTRLYAVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-----NSTTLNIPIKMDG 236 +T D + + R A+ A + +L + + + + + +G Sbjct: 181 LTFDAEGRPTGRIAAEQAALERGYWQLSGAKSWDLTEANPEARAGLPGNLRVTSELTREG 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q ++ +E+ ++ ++ F + +P L AM L+AA ++ Sbjct: 241 IQDSFGDPSAIPIWELPAYVAGLERAG-FSARKHRVWMQMEFALPATLAAMVLVAAGFTM 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 SR +V + GF L+ + + G++G + + AA P ++ + S+ +LL Sbjct: 300 RHSRFGGTGRMVLLALLGGFSLFFLRNFAQVLGENGQIPILLAAWSPPLIGVMGSLGLLL 359 Query: 357 QKEDG 361 EDG Sbjct: 360 HLEDG 364 >gi|146277167|ref|YP_001167326.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] gi|145555408|gb|ABP70021.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] Length = 364 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 151/365 (41%), Gaps = 9/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + +L+ L L+ +ID+ + + + ++ + +L+ RVP I Sbjct: 2 ILSRYIARRFLRMVFIVFLVFFGLMMLIDVLDQMRRFSD-EGITLVQAGLLSLLRVPATI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ + +F L RTSELV+ RA G S + L ++ ++ +G V V+NPI Sbjct: 61 YTILPLIVILAAVALFLGLARTSELVVVRAAGRSGLRFLVAPMIVALAIGAAAVTVLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + S+ W++ + I A + + T Sbjct: 121 VAGTSRQYDAAASRLARGEASILSISEEGLWLRQGGAEGQTVIHAARSNTDGTRLYAVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDG 236 +T D R A+ A + +L + + + + + + +G Sbjct: 181 LTFDGNGLPRSRVAAEQAALETGYWQLSGAKSWDLTLANPEASANLEGNIRVPSDLTREG 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q ++ +E+ ++ ++ F + + +P ML AM L+AA ++ Sbjct: 241 IQDSFGDPSAIPIWELPAYVAGLERAG-FSARKHRVWMQMELALPFMLAAMVLVAAGFTM 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 SR +V + SGF L+ + + G++G + + AA P ++ + S+ +LL Sbjct: 300 RHSRFGGTGRMVLLALLSGFGLFFLRNFAQVLGENGQIPILLAAWSPPLIGVMGSLGLLL 359 Query: 357 QKEDG 361 EDG Sbjct: 360 HLEDG 364 >gi|163735796|ref|ZP_02143225.1| permease YjgP/YjgQ family, putative [Roseobacter litoralis Och 149] gi|161390882|gb|EDQ15222.1| permease YjgP/YjgQ family, putative [Roseobacter litoralis Och 149] Length = 365 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 86/366 (23%), Positives = 155/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + + + + L+ ++DL + + + S + L P I Sbjct: 2 ILHLYFARRFASWLMIAFIALFALIALVDLVDQTRRFADR-GVSAAGIFELVILNTPQTI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QI+P I L+ + F +L R+SEL+ +RA G S L V I+LG +NPI Sbjct: 61 SQILPLIVLLATVAFFLSLARSSELIATRASGRSAMGALIAPVGVVIVLGTLATTTLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNG--DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K +L Q ++ G S W++ + I A + P+ + D T Sbjct: 121 VAATSKKYNELSQTYRTGGGSTFSISTEGLWLRQGTDDGQMVIRAWRSNPDASVLFDVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR------IPIDKNSTTLNIPIKMD 235 + + + R AD A + + L+ V ++ R + S T+ + ++ Sbjct: 181 LAYEVIGTPVRRIHADSAELKDGAWLLRNVKDWPLARGINSEGNATEHRSLTIPSSLTVE 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 ++ ++ S +E+ + N++ F + + + PL LVAM LIA++ + Sbjct: 241 RIRESFGHPSTISIWEMNDFIKQLNQAG-FSSLQHRVWLQSELARPLFLVAMVLIASAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V + GF LY + + G++G L AA P I ++ L+ L Sbjct: 300 MRHTRFGGTGVAVLAAVLLGFALYFVRSFGLILGENGQLPVYLAAWAPPIASVLLAFGPL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHAEDG 365 >gi|126462313|ref|YP_001043427.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103977|gb|ABN76655.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] Length = 364 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 148/365 (40%), Gaps = 9/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + +L+ L L+ +ID+ + + + ++ + +L+ RVP + Sbjct: 2 ILSRYIARRFLRMVFIVFLAFFGLMMLIDVLDQMRRFSD-EGITLVQAGLLSLLRVPATL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ + +F L R+SELV+ RA G S + L +V ++ LG V V+NPI Sbjct: 61 YTILPLIVILAAVALFLGLARSSELVVVRAAGRSGLRFLVAPMVVALALGTVAVTVLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + S W++ + I A + + T Sbjct: 121 VAGTSRQYDAAAGRLARGEASILSISKEGLWLRQGGSGEQTVIHALRSNTDGTRLYAVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-----NSTTLNIPIKMDG 236 +T D + + R A+ A + +L + + + + + +G Sbjct: 181 LTFDAEGRPTGRIAAEQAALERGYWQLSGAKSWDLTEANPEARASLPGNLRVTSELTREG 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q ++ +E+ ++ ++ F + +P L AM L+AA ++ Sbjct: 241 IQDSFGDPSAIPIWELPAYVAGLERAG-FSARKHRVWMQMEFALPATLAAMVLVAAGFTM 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 SR +V + GF L+ + + G++G + + AA P ++ + S+ +LL Sbjct: 300 RHSRFGGTGRMVLLALLGGFSLFFLRNFAQVLGENGQIPILLAAWSPPLIGVMGSLGLLL 359 Query: 357 QKEDG 361 EDG Sbjct: 360 HLEDG 364 >gi|85716330|ref|ZP_01047303.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696846|gb|EAQ34731.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 365 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 88/360 (24%), Positives = 165/360 (45%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF +L L + +L+ ++D E+ + L + S A + RVP ++ Sbjct: 7 TLGRYFAGRFLVAALGVFVSIFLLLVLVDYIEMVRRTSGLASASALVVAETSLFRVPQLL 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++ PF L+ + + L+R ELV++RA G+S WQ ++P + +I+LG V NP+ Sbjct: 67 EKLTPFCVLIGAMTCYLALSRQLELVVARAAGVSAWQFISPALACAIVLGALATTVYNPL 126 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ + + G + W+ I A + + T Sbjct: 127 SANLRELSKRMEAELFGGVSGGGLQDASGFWINQVTDDGQAIINAARSEQQGVRLTGLTV 186 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ R +A A + + + K V + P+++ + L+ + Q Sbjct: 187 FRFNPHSRFEERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLSTSLTPAQVQNSF 246 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+++ + S S Q++ LI P +L AM ++AASVSL F R Sbjct: 247 STPETVSFWQLPGYIKSSESSGFATAG-YRLQYHKLIAQPFLLAAMVMLAASVSLRFFRF 305 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ SGF+LY + + + K+ ++ P+AAA +PV + L+LL +EDG Sbjct: 306 GGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLLYQEDG 365 >gi|75675870|ref|YP_318291.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420740|gb|ABA04939.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 365 Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 89/360 (24%), Positives = 163/360 (45%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF ++ L +L+ ++D E+ + L + S A + RVP ++ Sbjct: 7 TLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRVPQLL 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++ PF L+ + + L+R ELV++RA G+S WQ ++P + +I LG+F V NP+ Sbjct: 67 EKLTPFCVLIGAMTCYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFATTVYNPL 126 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +++ ++ + + G W+ I A + T Sbjct: 127 SSNLRELSKRMEAEMFGGASGGGLHDASGFWINQVTDDGQAIINAALSEQQGVRLTGLTV 186 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D ++ R +A A + + + K V + P+++ + L + Q Sbjct: 187 FRFDPDSRFRERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLPTSLTPAQVQNSF 246 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+++ + S S Q++ LI P +L AM ++AASVSL F R Sbjct: 247 STPETVSFWQLPDYIRSSESSGFATAG-YRLQYHKLIAQPFLLAAMVMLAASVSLRFFRF 305 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ SGF+LY + + + K+ ++ P+AAA +PV + L+LL +EDG Sbjct: 306 GGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLLHQEDG 365 >gi|90419501|ref|ZP_01227411.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90336438|gb|EAS50179.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 360 Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 109/358 (30%), Positives = 181/358 (50%), Gaps = 2/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF+ Y+ + L LL L+++IDL E+ + + A+ + RVP I Sbjct: 5 TLNRYFFRLYVVSFLSTLLTVFALIYLIDLIEVSRR-SRFEDLGFGATALFSLLRVPSFI 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q PFI L +I LNR ELV++RA G+SIWQ+L PFVVGS L+GI V NP+ Sbjct: 64 GQAFPFIVLFSSIYTLLTLNRRLELVVARASGVSIWQILLPFVVGSFLIGIVATFVYNPL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + D+ GD SD +PW++ +GAK + + D T+ Sbjct: 124 TAYTKTLSEDMQTTMTAGGDVSSSDRVPWLRQEGDGIQSILGAKTVARSGTVLGDITAFV 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + + R DA A++ ++ L+K + G P L ++ + ++ Sbjct: 184 MNDEGIVKERIDAARAVLNDEYWLLEKPRVTRVGYRPEFPQEYKLPTSLRPEYVEQRIAD 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S +++ K+ + F+ Q++ L+ P + +AMTL+AA+V+ FSR+ Q Sbjct: 244 PEAISIWQLGSKIDVAASLG-FNTDAFRMQYHTLVAQPALFIAMTLLAATVATRFSRTGQ 302 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +A G+ +GF+LY + + K+ G + ++ PV AA PV+ + ILL +EDG Sbjct: 303 SGRTIAGGVMAGFVLYVVTFLAKALGSNDVVPPVMAAWFPVLAAGLSGVTILLHQEDG 360 >gi|258542096|ref|YP_003187529.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633174|dbj|BAH99149.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636231|dbj|BAI02200.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639286|dbj|BAI05248.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642340|dbj|BAI08295.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645395|dbj|BAI11343.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256648450|dbj|BAI14391.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256651503|dbj|BAI17437.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654494|dbj|BAI20421.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 370 Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 86/366 (23%), Positives = 166/366 (45%), Gaps = 9/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + ++ + + + +V + D ++ ++ P+ S + +AA VP Sbjct: 6 TLSRYIARQFVFSVVAMIASLTGIVCLFDFIDLLRRVATKPDVSTNVVTEIAALHVPYFA 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+PF L+ IV F+ L R+SEL+++RA GIS WQ L V ++L+G +I+P+ Sbjct: 66 TEILPFGMLLGGIVCFWRLTRSSELIVARAAGISAWQFLTAPVACAMLIGAVFTTLISPV 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--------I 175 ++S + +L QQ+ G S + + +L Sbjct: 126 SSSMYRRAEELDQQYLRTGGGPLSLSSGSLWLRQSDSQYDPHGVAMLHARGVQLKDGLLR 185 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + +D ++K++ R +A + K L + + L + ++ Sbjct: 186 IRNVSVFRLDHQDKLMMRIEAPEGYLGTLKWILSDASVVRPNDLLHHVGQIDLPTDLTVN 245 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + S + + +S ++S F + R F L+ +P++ M L+AA S Sbjct: 246 RVQESFSSPETLSVWALPGFISLLDRSG-FSSIRHRIHFQSLLALPMLAGTMALVAAGFS 304 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + SR ++ G+ +GF+L+T+ + + FG SG L P+ AA P + + L++ +L Sbjct: 305 MRPSRRGGVARMIGSGVAAGFLLFTVSKVAEQFGNSGALPPMLAAWAPTLAGLCLAVSLL 364 Query: 356 LQKEDG 361 L EDG Sbjct: 365 LHLEDG 370 >gi|158425948|ref|YP_001527240.1| permease precursor [Azorhizobium caulinodans ORS 571] gi|158332837|dbj|BAF90322.1| permease precursor [Azorhizobium caulinodans ORS 571] Length = 363 Score = 176 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 89/360 (24%), Positives = 161/360 (44%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF + + + + L+ ++D E+ + + S A+L R P Sbjct: 5 TLGFYFARRFFASVTMIFFSCVGLIMLVDFLEMARRTADRDTVSAVTVALLTIYRTPAFT 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q++PF L + F L+R ELV++RA+G+S+WQ +P ++ + L+G+F V NP+ Sbjct: 65 EQLLPFAVLFGGMATFVTLSRKLELVVARAVGLSVWQFTSPALLVAFLIGVFATCVFNPV 124 Query: 124 ATSGEKIGIDLIQQWKD--NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + + + +G + W++ + I A T Sbjct: 125 SADFKERANRMEAEIFNTASGVFTQGTSGFWIRQQSVDGQAIIQAAASQQGGRQLTGVTV 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D+ K+ R +A AI+ + +K+ G + L + Q+ Sbjct: 185 FEFDRNGKLTDRVEAKSAILGDGYWTMKEARVLVPGSDQQTFETYLLATKLDPKQIQESL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+++ +S + +S F R Q L+ P +LVAM LIAA V L R Sbjct: 245 VSPETVSFWQLPDAISNAEQSG-FGAARYRLQLQSLLARPFLLVAMVLIAAVVGLRVFRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + G+ +GF+LY + + G +G++ P+AAA P + I + +LILL +EDG Sbjct: 304 GGVGQTILGGVLAGFLLYLGTKLAEDLGDAGVVHPIAAAWFPALAGIFMGVLILLHREDG 363 >gi|329114151|ref|ZP_08242913.1| Lipopolysaccharide export system permease protein LptG [Acetobacter pomorum DM001] gi|326696227|gb|EGE47906.1| Lipopolysaccharide export system permease protein LptG [Acetobacter pomorum DM001] Length = 370 Score = 176 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 86/366 (23%), Positives = 166/366 (45%), Gaps = 9/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + ++ + + + +V + D ++ ++ P+ S + +AA VP Sbjct: 6 TLSRYIARQFVFSVVAMIASLTGIVCLFDFIDLLRRVATKPDVSTNVVTEIAALHVPYFA 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+PF L+ IV F+ L R+SEL+++RA GIS WQ L V ++L+G +I+P+ Sbjct: 66 TEILPFGMLLGGIVCFWRLTRSSELIVARAAGISAWQFLTAPVACAMLIGALFTTLISPV 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--------I 175 ++S + +L QQ+ G S + + +L Sbjct: 126 SSSMYRRAEELDQQYLRTGGGPLSLSSGSLWLRQSDSQYDPHGVAMLHARGVQLKDGLLR 185 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + +D ++K++ R +A + K L + + L + ++ Sbjct: 186 IRNVSVFRLDHQDKLMMRIEAPEGYLGTLKWILSDASVVRPNDLLHHVGQIDLPTDLTVN 245 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + S + + +S ++S F + R F L+ +P++ M L+AA S Sbjct: 246 RVQESFSSPETLSVWALPGFISLLDRSG-FSSIRHRIHFQSLLALPMLAGTMALVAAGFS 304 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + SR ++ G+ +GF+L+T+ + + FG SG L P+ AA P + + L++ +L Sbjct: 305 MRPSRRGGVARMIGSGVAAGFLLFTVSKVAEQFGNSGALPPMLAAWAPTLAGLCLAVSLL 364 Query: 356 LQKEDG 361 L EDG Sbjct: 365 LHLEDG 370 >gi|110680307|ref|YP_683314.1| YjgP/YjgQ family permease [Roseobacter denitrificans OCh 114] gi|109456423|gb|ABG32628.1| permease YjgP/YjgQ family, putative [Roseobacter denitrificans OCh 114] Length = 365 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 156/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + + L + L+ ++DL + + + S + L P I Sbjct: 2 ILHLYFARRFASWLLIAFIALSALIALVDLVDQTRRFADR-GVSATGIFELVILNTPQTI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QI+P I L+ + F +L R+SEL+ +RA G S L V ILLG +NPI Sbjct: 61 SQILPLIVLLATVAFFLSLARSSELIATRASGRSAMGALVAPVSVVILLGTLATTTLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K +L Q ++ G S W++ + + I A + P+ + D T Sbjct: 121 VAATSKKYNELSQIYRTGGVSTLSISTEGLWLRQATDDGQMVIRAWRSNPDASVLFDVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR------IPIDKNSTTLNIPIKMD 235 + + + R AD A + + L+ V ++ R + S T+ + ++ Sbjct: 181 LAYEVIGTPVRRIHADSAELKDGAWLLRNVKDWPLARGINSEGNATEHRSLTIPSSLTVE 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 ++ ++ S +E+ + N++ F + + + PL LVAM LIA++ + Sbjct: 241 RIRESFGHPSTISIWEMTDFIKQLNQAG-FSSLQHRVWLQSELARPLFLVAMVLIASAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V + GF LY + + G++G L AA P I ++ L+ L Sbjct: 300 MRHTRFGGTGVAVLAAVLLGFALYFVRSFGLILGENGQLPVYLAAWAPPIASVLLAFGPL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHAEDG 365 >gi|39936125|ref|NP_948401.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|39649979|emb|CAE28503.1| predicted permease [Rhodopseudomonas palustris CGA009] Length = 361 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 91/359 (25%), Positives = 169/359 (47%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF + ++ +L G +L+ +D ++ + G L S A + RVP ++ Sbjct: 5 TLGRYFARRFVIASLGVFFGLFVLLVFVDYVDLLRRAGGLA-VSAFYVAQASFCRVPQLL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R+ ELV++RA G+S W+ ++P + +I +GIF V NP+ Sbjct: 64 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATTVFNPL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ + + D WM +P I A + + + T Sbjct: 124 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVSPDGQAIINAARSQQQGAVLTGITVF 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + R +A A++ LK V Y P+D+++ L + + + Sbjct: 184 RFEPDFQFKDRIEAREAVLEPGHWLLKNVRRYTMDGAPVDQDTLELPTSLTLAQVRNSFA 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S SF+++ + S S Q++ L+ P +L AM ++AASVSL F R Sbjct: 244 TPESVSFWQLPTYIKSSENSGFATAG-YRLQYHKLLAKPFLLAAMVMLAASVSLRFFRFG 302 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + L LL +EDG Sbjct: 303 GVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFLALLYQEDG 361 >gi|259419234|ref|ZP_05743151.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] gi|259345456|gb|EEW57310.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] Length = 368 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 13/369 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL Y+ K + + L M LV +IDL+E + + + + L P + Sbjct: 2 ILDLYYAKRFFQWFLVIAAVLMSLVMLIDLSEQFRRF-DGQDLQFGQLLELTLLNTPAAL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P I ++ IV++ + R+SELV++RA+G S + L P VV +++LG V +NPI Sbjct: 61 NEFLPLIMILTTIVLYVGMARSSELVVTRALGRSGIRALLPPVVVALILGGLAVSTLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK---QKSDIIPWMQISNPQQDIFIGAKKILPENH--IWED 178 + L + ++ G S W++ I A + D Sbjct: 121 VAATTNRFDSLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLFLYD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPI 232 + +T R A A + + L+ +Q R + L + Sbjct: 181 VSILTYTPDGGPTRRTIAAEARLDGEDWVLRDAKVWQLIVGVNPERSAKSYDELRLPTTL 240 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + + S YE+ + + +++ F R + + PL LVAM L+ A Sbjct: 241 TNERIRDTLGYAEGISIYELPQTIKSLSEAG-FSTTRFQVWLQVELARPLFLVAMVLVGA 299 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + ++ +R I V + GF LY + + G++G + + AA P + +I L++ Sbjct: 300 AFTMRHTRLGGTGIAVLTSVLLGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTM 359 Query: 353 LILLQKEDG 361 +LL EDG Sbjct: 360 GLLLHAEDG 368 >gi|114704780|ref|ZP_01437688.1| hypothetical protein FP2506_07586 [Fulvimarina pelagi HTCC2506] gi|114539565|gb|EAU42685.1| hypothetical protein FP2506_07586 [Fulvimarina pelagi HTCC2506] Length = 360 Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 2/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF+ YL ++ LV +IDL E+ + L + S+ + +A RVP + Sbjct: 5 TLNRYFFRLYLVNFFSTVVAVSALVLLIDLVELGRR-SVLADQSLGVLLLFSALRVPAFM 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q PFI L +I +LNR ELV++RA G+S WQ+L PF+ GS+ LG+ NP+ Sbjct: 64 EQAFPFIILFSSIFTLISLNRRLELVVARAAGVSAWQILMPFIAGSLFLGLLATFAYNPL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ + + PW++ + +GA ++ + + ++ Sbjct: 124 SAYTKAQAANIESAAEGREVASSALQTPWLRQNADGVRSIMGATQVAENGRVLSNVSAFV 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + R DA A + N + L + + G P D L ++ + ++ Sbjct: 184 MADDGSVETRIDAPRAELGNQEWILLRPRVTRIGYTPRDLVEYRLPTSLRPEYIEQRLAD 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S +E+ K+ + F++ Q++ LI P + VAMTL+AA+V+ FSR+ Q Sbjct: 244 PETISIWELGSKIDVAASLG-FNSMAFSMQYHTLIAQPALFVAMTLLAATVATRFSRTGQ 302 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 P I G+ +GF+LY + + K+ G + ++ P+ AA PV+ + ILL +EDG Sbjct: 303 PGRIFVGGVLAGFVLYVVTFLAKALGSNDVVPPIVAAWFPVLAAGLFGVTILLHQEDG 360 >gi|92117864|ref|YP_577593.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800758|gb|ABE63133.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 365 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 86/360 (23%), Positives = 163/360 (45%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF ++ L +L+ ++D E+ + L + S A + RVP ++ Sbjct: 7 TLGRYFASRFVVAALGVFASIFLLLVLVDYIEMVRRTSGLASASAIMVAETSLFRVPQLL 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++ PF L+ + + L+R ELV++RA GIS WQ ++P + +++LG+ NP+ Sbjct: 67 EKLTPFCVLIGAMTCYLALSRRLELVVARAAGISAWQFISPALACALVLGVLATTAYNPM 126 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ + + + G + W+ I A + + T Sbjct: 127 SANLRELSKKMEAELFGSVSGGGLQEASGFWINQVTDDGQAIINAARSEQQGVRLTGLTV 186 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + R +A A + + + K V + P+++ + L + + Sbjct: 187 FRFDPDSTFRERIEAREATLEDGRWLFKGVRRFTLDSPPVEQETFVLPTSLTAAQVRNSF 246 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+++ + S S Q++ LI P +L AM ++AASVSL F R Sbjct: 247 STPETVSFWQLPGYIRSSESSGFATAG-YRLQYHKLIAQPFLLAAMVMLAASVSLRFFRF 305 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ SGF+LY + + + K+ ++ P+AAA +PV + L+LL +EDG Sbjct: 306 GGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLAGFLVLLHQEDG 365 >gi|90423815|ref|YP_532185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105829|gb|ABD87866.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 362 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 164/359 (45%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF ++ L G +L+ +D ++ + G P+ S + RVP ++ Sbjct: 5 TLSRYFAGRFVTAALAVFAGLFVLLVFVDYIDLLRRAGGRPSISALLIVQTSVYRVPQLL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R ELV++RA GIS WQ + P + ++ LG+F +V NP+ Sbjct: 65 ERLMPFCILIGAMTCYLALSRRLELVVARAAGISAWQFMAPALWSALALGVFATVVFNPM 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + ++ + + + D W+ + I A + + + + Sbjct: 125 SANMQERAKQMEAEMFGDSSGSLQDASGFWINQVTTEGQAIINAARSQQQGALLTGLSVF 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + R +A A + + K + Y P+D++ L + + + Sbjct: 185 RFEPDFSFSERIEAREATLEPGFWRFKNLRRYTLDGPPVDQDVFLLPTTLTLAQVRNSFS 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + SF+++ + S S QF+ L+ P +L AM ++AASVSL F R Sbjct: 245 TPETVSFWQLPGYIRSSESSGFATAG-YRLQFHKLLARPFLLAAMVMLAASVSLRFFRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + L LL +EDG Sbjct: 304 GVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGSLAGFLALLHQEDG 362 >gi|192291843|ref|YP_001992448.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|192285592|gb|ACF01973.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 362 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 91/359 (25%), Positives = 169/359 (47%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF + ++ +L G +L+ +D ++ + G L S A + RVP ++ Sbjct: 6 TLGRYFARRFVIASLGVFFGLFVLLVFVDYVDLLRRAGGLA-VSAFYVAQASFCRVPQLL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R+ ELV++RA G+S W+ ++P + +I +GIF V NP+ Sbjct: 65 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATTVFNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ + + D WM +P I A + + + T Sbjct: 125 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVSPDGQAIINAARSQQQGAVLTGITVF 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + R +A A++ LK V Y P+D+++ L + + + Sbjct: 185 RFEPDFQFKDRIEAREAVLEPGHWLLKNVRRYTMDGAPVDQDTLELPTSLTLAQVRNSFA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S SF+++ + S S Q++ L+ P +L AM ++AASVSL F R Sbjct: 245 TPESVSFWQLPTYIKSSENSGFATAG-YRLQYHKLLAKPFLLAAMVMLAASVSLRFFRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + L LL +EDG Sbjct: 304 GVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFLALLYQEDG 362 >gi|126728788|ref|ZP_01744603.1| permease, YjgP/YjgQ family protein [Sagittula stellata E-37] gi|126710718|gb|EBA09769.1| permease, YjgP/YjgQ family protein [Sagittula stellata E-37] Length = 364 Score = 174 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 153/366 (41%), Gaps = 11/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y+ + +L L + ++DL + Q+G+ S L ++P + Sbjct: 2 TLHFYYARRFLSLFLGIFAVFALFQGLLDLIDELRQLGD--EVSFGETLQLVILKLPEGL 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ + +F L R+SELV +RA G S L ++L+G V ++NPI Sbjct: 60 YEILPLVMILATVAMFIGLARSSELVATRAAGRSGLTALMAPATVALLIGAIIVAMMNPI 119 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K DL + ++ W++ I A + PE D + Sbjct: 120 VAATSKRYADLRETYESGNTSAVSFGPEGLWLRQGGEDGQSVIRAARANPEATELYDVSI 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK------NSTTLNIPIKMD 235 +T R A+ A + + L + + L + + Sbjct: 180 VTYAPDGGPAMRIQAESAALSDGAWHLTDAKAWPLTPGLNPELGARLHVEYELPSTLTRE 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + ++ + +++ + ++ +S F R + + PL LVAM L+ A+ + Sbjct: 240 SIRDRFGRPSAVAIWDLPQFIAGLEESG-FSARRHIVWYNMELARPLFLVAMVLVGAAFT 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ +R + + V + GF LY + + + G++G L PV AA +P ++ L++ ++ Sbjct: 299 MQPTRLARTGLAVLSAVLLGFGLYYVRSFAQIMGENGQLAPVVAAWVPPTASVLLALGLV 358 Query: 356 LQKEDG 361 L EDG Sbjct: 359 LHMEDG 364 >gi|15964906|ref|NP_385259.1| hypothetical protein SMc00583 [Sinorhizobium meliloti 1021] gi|307300976|ref|ZP_07580745.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317711|ref|ZP_07597149.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074085|emb|CAC45732.1| Hypothetical, transmembrane protein [Sinorhizobium meliloti 1021] gi|306896473|gb|EFN27221.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903931|gb|EFN34517.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 360 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 141/360 (39%), Positives = 213/360 (59%), Gaps = 2/360 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RYFFK Y +TT +FL+G L+F+ID +E+ ++M LP+Y++S ++ R+P Sbjct: 3 FNTLGRYFFKRYARTTFWFLVGIFALIFIIDFSELTSRMSNLPHYTVSGALLMTTFRIPT 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+QQ +PF+ L + +LNR ELV++RA GIS+WQ L PFVVG++L G+ V+VIN Sbjct: 63 ILQQTVPFVALFAAMAALISLNRRYELVVTRAAGISVWQFLRPFVVGALLFGVLAVVVIN 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 P+A G K L +W + ++ IPW++ D IGA+ + + T Sbjct: 123 PLAAWGTKKAEALEAEW-GSTRSAAANSIPWLRQIYDGTDTIIGARSVQNGGTELINVTV 181 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I D + I R+DA A + + L VVE + GR+P + L +K D Q+ Sbjct: 182 IHFDPQGAITLRQDAKSAKLEDGYWLLNGVVETEVGRLPRRMETAQLRTNLKPDFVQERL 241 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S F+++ +K+ + F ETQF+ L+ +PL+LVAMTLIAA VSL+FSR Sbjct: 242 AKADSIQFFDLPRKIEVARSFG-FSTNGLETQFHSLMSLPLLLVAMTLIAACVSLKFSRF 300 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 NQ R ++ GI SGF+LY + ++K+FG SGI+ P AA +PV++ ++L ILL +EDG Sbjct: 301 NQSRSVILGGILSGFVLYVVTVLVKAFGSSGIVPPFVAAWLPVVVAMALGSTILLHQEDG 360 >gi|316933707|ref|YP_004108689.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601421|gb|ADU43956.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 361 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 91/359 (25%), Positives = 167/359 (46%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF + ++ +L G +L+ +D ++ + G L S A + RVP ++ Sbjct: 5 TLGRYFARRFVVASLGVFFGLFVLLVFVDYVDLLRRAGGLA-VSAFYVAQASFCRVPQLL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R+ ELV++RA G+S W+ ++P + +I +GI + NP+ Sbjct: 64 ERLLPFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIVATTIFNPL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ + + D WM NP I A + + + T Sbjct: 124 SAHMQERAKQMEAEMFGENTGGLQDANGFWMNQVNPDGQAIINAARSQQQGAVLTGITIF 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D + R +A A++ LK V Y P D+++ L + + + Sbjct: 184 RFDPNFQFRDRIEAREAVLEPGHWLLKSVRRYTLDSAPTDQDTMELPTSLTLAQVRNSFA 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S SF+++ + S S Q++ L+ P +L AM ++AASVSL F R Sbjct: 244 TPESVSFWQLPAYIKSSENSGFATAG-YRLQYHKLLAKPFLLAAMVMLAASVSLRFFRFG 302 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + L LL +EDG Sbjct: 303 GVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFLALLYQEDG 361 >gi|254486546|ref|ZP_05099751.1| permease, YjgP/YjgQ family [Roseobacter sp. GAI101] gi|214043415|gb|EEB84053.1| permease, YjgP/YjgQ family [Roseobacter sp. GAI101] Length = 365 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 87/366 (23%), Positives = 155/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + ++ + L+ ++D+ E + E + R + P + Sbjct: 2 ILHLYFARRFVTGFVLISAVLFALLILVDMVEQARKFAE-HDIGWQRLFGMTLLNTPETL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ +V+F +L R+SELV++RA G S L V + ++GI V ++NPI Sbjct: 61 NLILPLIMILATVVLFLSLARSSELVVTRASGRSALSALQAPVWVAFIIGIMAVGMLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K I L + + G SD W++ Q I A + + + D T Sbjct: 121 VAATAKRYIQLSESIRAGGVSTLSISDEGLWLRQGGDQGQTVIRAWRSNADASVLYDVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG------RIPIDKNSTTLNIPIKMD 235 +T + I R +A A + +D L + + TL + +D Sbjct: 181 LTYAAQGGPIRRIEASSAALEDDGWVLTGAKSWPLELGVNAEGNAEVFETLTLPSTLTLD 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 ++ S Y++ + + F R + + P LVAM L+A++ + Sbjct: 241 RIRESITDPGVVSIYDLPGFIHQLELAG-FSPRRHKVWLQTELARPFFLVAMVLVASAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V + GF LY I + + G++G + V AA P + +I L+I +L Sbjct: 300 MRHTRFGGTGVAVLASVLLGFGLYFIRSFAQILGENGQIPVVLAAWAPPVASILLAIGLL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHAEDG 365 >gi|254477617|ref|ZP_05091003.1| permease YjgP/YjgQ [Ruegeria sp. R11] gi|214031860|gb|EEB72695.1| permease YjgP/YjgQ [Ruegeria sp. R11] Length = 367 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 81/368 (22%), Positives = 149/368 (40%), Gaps = 12/368 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y+ + +L+ + LV +IDLNE + + + S + L P + Sbjct: 2 TLDFYYARRFLQWFAVICAVLLTLVMLIDLNEQIRRF-DAQDLSFGQLFGLTLLNAPAAL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P I ++ IV+F L R+SELV++RAIG S + L VV + +G+ V +NPI Sbjct: 61 SEFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVVLAAFIGLLAVSTLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDF 179 + DL + +++ G + W++ Q I AK + Sbjct: 121 VAATSNHYRDLAETYRNGGPAALSLTGEGLWLRQGGAQGQSVIHAKGYSGDVEDVTLLGV 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIK 233 T ++ + + I + A A + L + + S L+ + Sbjct: 181 TILSYGPEGRPIRQTVARSATLDGSDWVLTNAKVWPLVTGVNPETNATEHASLRLSTTLT 240 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + S Y++ + ++ F R E + PL L+AM L+ A+ Sbjct: 241 SERIRDTLGTATGISVYDLPATIRELAEAG-FSTKRYEVWLQVELARPLFLIAMVLVGAA 299 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 ++ +R + V + GF LY + + G++G + A P + I L++ Sbjct: 300 FTMRHARFGGTGLAVLMAVLLGFGLYFLRNFAQILGENGQIPVALAGWAPPVAAILLTMG 359 Query: 354 ILLQKEDG 361 +LL EDG Sbjct: 360 LLLHAEDG 367 >gi|150395988|ref|YP_001326455.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027503|gb|ABR59620.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 360 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 139/360 (38%), Positives = 212/360 (58%), Gaps = 2/360 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RYFFK Y +TT +FL+G L+F+ID +E+ ++M LP+Y++S ++ R+P Sbjct: 3 FNTLGRYFFKRYARTTFWFLIGIFALIFIIDFSELTSRMSNLPHYTVSGALLMTTFRIPT 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+QQ +PF+ L + +LNR ELV++RA GIS+WQ L PFVVG+++ G V+VIN Sbjct: 63 ILQQTVPFVALFAAMAALISLNRRYELVVTRAAGISVWQFLRPFVVGALIFGALAVVVIN 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 P+A G K L +W + ++ IPW++ D IGA+ + + T Sbjct: 123 PLAAWGTKKAEALEAEW-GSTRSAAANSIPWLRQIYDGTDTIIGARSVQNGGTELINVTV 181 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I D + I R+DA A + + L VVE + GR+P + L ++ D Q+ Sbjct: 182 IHFDPQGAITLRQDAKSAKLEDGYWLLNGVVETEVGRLPRRMETAQLRTNLRPDFVQERL 241 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S F+++ +K+ + F ETQF+ L+ +PL+LVAMTLIAA VSL+FSR Sbjct: 242 AKADSIQFFDLPRKIEVARSFG-FSTNGLETQFHSLMSLPLLLVAMTLIAACVSLKFSRF 300 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 NQ R ++ GI SGF+LY + ++K+FG SGI+ P AA +PV++ ++L ILL +EDG Sbjct: 301 NQSRSVILGGILSGFVLYVVTVLIKAFGSSGIVPPFVAAWLPVVVAMALGSTILLHQEDG 360 >gi|86749599|ref|YP_486095.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572627|gb|ABD07184.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 361 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 91/359 (25%), Positives = 167/359 (46%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF ++ + L G +L+ +D ++ + G L S A + RVP ++ Sbjct: 5 TLGRYFAARFVSSALGVFFGLFVLLVFVDYIDLLRRAGGLS-VSAFVIAQASFFRVPQLL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R ELVI+RA G+S WQ + P + ++ LG+F V NP+ Sbjct: 64 ERLLPFCILIGGMTCYLALSRRLELVIARAAGLSAWQFIAPALWSALALGVFASAVFNPM 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ + + G D WM +P+ I A + + + + Sbjct: 124 SAYMQERAKQMEAELFGQGSGSLQDANGFWMNQVSPEGQSIINAARSQQQGAVLSGISVF 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + R +A A++ LK V +Y P ++ + L + + + Sbjct: 184 RFEPDFQFKDRIEAREAVLEPGYWLLKDVRKYTLDSAPEEQATLRLPTALTLAQVRNSFA 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S SF+++ + S S Q++ L+ P +L AM ++AASVSL F R Sbjct: 244 TPESVSFWQLPSYIKASESSGFATAG-YRLQYHKLLAKPFLLAAMVMLAASVSLRFFRFG 302 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + L LL +EDG Sbjct: 303 GVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFLALLYQEDG 361 >gi|91977435|ref|YP_570094.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683891|gb|ABE40193.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 361 Score = 172 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 89/361 (24%), Positives = 170/361 (47%), Gaps = 3/361 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RYF ++ + L G +L+ +D ++ + G L S A + RVP Sbjct: 3 MNTLGRYFAARFVTSALGVFFGLFVLLVFVDYIDLLRRAGGLA-VSALVIAQASFYRVPQ 61 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++++++PF L+ + + L+R+ ELVI+RA G+S W+ ++P + ++ LG+F V N Sbjct: 62 LLERLMPFCILIGGMTCYLALSRSLELVIARAAGLSAWEFVSPALWSALALGVFASAVFN 121 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 P++ ++ + + G D WM +P+ I A + + + + Sbjct: 122 PMSAYMQERAKQMEAELFGQGSGSLQDASGFWMNQVSPEGQSIINAARSQQQGAVLSGIS 181 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + R +A A++ L+ V Y P+ +++ L + + + Sbjct: 182 VFRFEPDFQFKDRIEAREAVLEPGHWLLRDVRRYTLDSAPVQEDTFRLPTALTLAQVRNS 241 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S SF+++ + S S + Q++ L+ P +L AM ++AASVSL F R Sbjct: 242 FATPESVSFWQLPSYIRASESSGFATSG-YRLQYHKLLAKPFLLAAMVMLAASVSLRFFR 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + L LL +ED Sbjct: 301 FGGVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCVGGLAGFLALLYQED 360 Query: 361 G 361 G Sbjct: 361 G 361 >gi|85706341|ref|ZP_01037435.1| permease, YjgP/YjgQ family protein [Roseovarius sp. 217] gi|85669114|gb|EAQ23981.1| permease, YjgP/YjgQ family protein [Roseovarius sp. 217] Length = 363 Score = 172 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 77/366 (21%), Positives = 152/366 (41%), Gaps = 12/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + + + L + ++++ +IDL + P + + + ++P Sbjct: 2 ILERYFGRRFFMSFLGVTVTLVVMLGLIDLMDELGDF---PELAFGQVLGIVLLKLPEAY 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IIP + ++ ++ +F L RTSELV+ RA G S Q L ++ +G+ + V NP+ Sbjct: 59 YEIIPLVMILASVALFLRLARTSELVVLRASGRSALQGLLAPAAVALAIGLLGLAVGNPL 118 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K DL+ + D + W++ S + I A + + + Sbjct: 119 VAATSKRHHDLVNSYSGQASSDLAIASEGLWLRQSAAEGQTVIYAARASSDLGTLYAPSF 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS------TTLNIPIKMD 235 K + R A A + L + + + + S T+ + D Sbjct: 179 YDFAPDGKPLRRISATSAQLEEGAWVLTEAKIWDLAQGVNPEASAREDAQMTVPSDLTQD 238 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 +E+ K ++ ++ F R F + P+ LVA+ LI+A+ + Sbjct: 239 RILDSFGSPEYVPIWELPKFIAQLEEAG-FSARRYAIWFQSELAQPVFLVALVLISAAFT 297 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ +R + V + GF L+ I + G++G + + AA P + ++ + + IL Sbjct: 298 MQHTRGANVGLSVLTAVLLGFGLHYIRNFAQILGENGQIPILLAAWAPPVASLFIGLGIL 357 Query: 356 LQKEDG 361 L EDG Sbjct: 358 LHLEDG 363 >gi|99080789|ref|YP_612943.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] gi|99037069|gb|ABF63681.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] Length = 368 Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 13/369 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL Y+ + +L+ + M LV +IDL+E + + + + L P Sbjct: 2 ILDLYYARRFLQWFMVIAAVLMSLVMLIDLSEQFRRF-DAQDLRFGQLLELTLLNAPAAF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P I ++ IV+F + R+SELV++RAIG S + L P VV +++LG V +NPI Sbjct: 61 SEFLPLIMILTTIVLFVGMARSSELVVTRAIGRSGIRALVPPVVVALVLGGLAVSTLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK---QKSDIIPWMQISNPQQDIFIGAKKILPENH--IWED 178 + L + ++ G S W++ I A + D Sbjct: 121 VAATTNRFETLSESYRQTGGPAAVSLSGEGLWLRQGGQNGQSVIHAANYRGDAENLYLYD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPI 232 + +T R A A + D L+ +Q R + L + Sbjct: 181 VSILTYAPDGGPTRRTVAAEARLEGDDWVLRDAKVWQLILGVNPERSAKRYDELRLPTTL 240 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + + S Y++ + + +++ F R + + PL LVAM L+ A Sbjct: 241 TNERIRDTLGYAEGISIYDLPQTIQSLSEAG-FSTTRFQVWLQVELARPLFLVAMVLVGA 299 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + ++ +R + V + GF LY + + G++G + + AA P + +I L++ Sbjct: 300 AFTMRHTRLGGTGVAVLTSVLLGFALYFVHNFARILGENGQIPILLAAWAPPVASILLTM 359 Query: 353 LILLQKEDG 361 +LL EDG Sbjct: 360 GLLLHAEDG 368 >gi|163739705|ref|ZP_02147113.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] gi|163743162|ref|ZP_02150544.1| permease, YjgP/YjgQ family protein [Phaeobacter gallaeciensis 2.10] gi|161383579|gb|EDQ07966.1| permease, YjgP/YjgQ family protein [Phaeobacter gallaeciensis 2.10] gi|161386935|gb|EDQ11296.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] Length = 367 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 154/368 (41%), Gaps = 12/368 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y+ + +L+ + LV +IDLNE + E + S+ + L P + Sbjct: 2 TLDFYYARRFLQWFAVICGVLLTLVMLIDLNEQIRRF-EAQDLSLGQLFGLTLLNTPAAL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P I ++ IV+F L R+SELV++RAIG S + L V+ + L+G+ V +NPI Sbjct: 61 SEFLPLIMILTTIVLFIGLARSSELVVTRAIGRSGIRALAAPVLLAALIGVLAVSTLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDF 179 + DL + +++ G + W++ Q I A + D Sbjct: 121 VAATSNRYRDLAETYRNGGPAALSLTGEGLWLRQGGAQGQSVIHATGYSGDTDDITLYDV 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIK 233 T ++ + + I + A+ A + L K + ++ L+ + Sbjct: 181 TILSYGPEGRPIRQTLAEEAALDGGDWVLIKAKVWPLIVGVNPETNAERHSTLRLSTTLT 240 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + S Y++ + +++ F R E + PL L+AM L+ A+ Sbjct: 241 SERIRDTLGTATGISVYDLPATIRELSEAG-FSTKRYEVWLQVELARPLFLIAMALVGAA 299 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 ++ +R + V + GF LY + + G++G + A P + I L++ Sbjct: 300 FTMRHARFGGTGLAVLTAVLLGFGLYFLRNFAQILGENGQIPVALAGWAPPVAAILLTMG 359 Query: 354 ILLQKEDG 361 +LL EDG Sbjct: 360 LLLHAEDG 367 >gi|330993928|ref|ZP_08317858.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] gi|329758874|gb|EGG75388.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] Length = 371 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 159/367 (43%), Gaps = 10/367 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + + TL + L+ + D ++ ++ PN S + +A +P Sbjct: 6 TLSLYIARQFTGATLAVIAFLTGLITMFDFIDLLRRVSTRPNVPTSLVSQIAFLHIPFAC 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+PF L+ I+ F+ L R+SELV++RA GIS WQ L V+ ++L+G ++P+ Sbjct: 66 LEILPFGVLLGGILCFWRLARSSELVVARAAGISAWQFLAGPVICAVLIGAMATTCVSPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGD---------KQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 ++ + L +Q+ + + + + I ++ Sbjct: 126 SSVMYRRAEALDRQYLRDNNGKSLNLSGGTLWLRQGDNGLVDHGVDIIHARQVRLNGGVL 185 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 T + + ++ R +A + + L+ + +P D TL+ + + Sbjct: 186 HIGGITIFRLGPDDGLLTRIEAQSGYLGGGRWILEGARMLRPDEMPSDMGRFTLHADLTL 245 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 G ++ + S + + + N+S F R F L+ +P++ M L+AA Sbjct: 246 AGVEESFASPDTLSVWALPGFIRQLNRSG-FSTIRHRLHFQSLLTLPVLSGTMALVAAGF 304 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S+ +R +++ G+ +GF L+ + I FG++G L PV AA P + L++ + Sbjct: 305 SMRPARRGGVIRMISSGVAAGFALFALSKIAAQFGETGTLPPVLAAWAPTGAGLCLAVTL 364 Query: 355 LLQKEDG 361 LL EDG Sbjct: 365 LLHLEDG 371 >gi|86138692|ref|ZP_01057265.1| permease, YjgP/YjgQ family protein [Roseobacter sp. MED193] gi|85824752|gb|EAQ44954.1| permease, YjgP/YjgQ family protein [Roseobacter sp. MED193] Length = 367 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 154/367 (41%), Gaps = 12/367 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y+ + +L+ M LV +IDLNE + E + S S L P + Sbjct: 3 LDLYYARRFLQWFAVICGVLMTLVMLIDLNEQIRRFDEF-DVSASEIVGLTLLNAPAALS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +P I ++ IV+F L R+SELV++RAIG S + L V+ + LLGI V +NPI Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLVAGLLGILAVSTLNPIV 121 Query: 125 TSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDFT 180 + + L ++ G S W++ +P I A + + D T Sbjct: 122 AATTNLSKTLADTYRTGGPSALSFSGEGLWLRQGSPSGQSVIHASSYGGGSDNIVLYDVT 181 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPIKM 234 + + I + A+ A + ++ L K + R + L + Sbjct: 182 ILAYAPQGGPIRQIIAESARLDGEEWLLHKAKAWHMTAGLNPERSAATHETLRLPTTLTQ 241 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 D + S Y++ + ++ F R + + + PL L+AM L+ A+ Sbjct: 242 DRIRDRLGSADGISVYDLPTTIRDLAQAG-FSTKRYQVWYQVELARPLFLIAMVLVGAAF 300 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ +R + V + GF LY + + G++G + AA P + +I L++ + Sbjct: 301 TMRHTRFGGTGLAVLTAVLLGFGLYFVRNFAQILGENGQIPVALAAWAPPVASILLTMGL 360 Query: 355 LLQKEDG 361 LL EDG Sbjct: 361 LLHAEDG 367 >gi|209885475|ref|YP_002289332.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873671|gb|ACI93467.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 364 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 91/358 (25%), Positives = 169/358 (47%), Gaps = 2/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF + ++ + LG +L+ ++D E+ + +P S A + RVP ++ Sbjct: 9 TLARYFARRFIVASCAVFLGIFLLLVLVDYIEMVRRTSSIPTASAFMVAQTSLFRVPQLL 68 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R+ ELV++RA GIS WQ + P +V ++++GI + NPI Sbjct: 69 ERLMPFCILIGAMSCYLALSRSLELVVARAAGISAWQFITPALVSALVMGILATVAYNPI 128 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ ++ Q NG Q W+ + I A + T Sbjct: 129 SAAMQERSKEMEAQLFSNGGVQDVAQS-WINQVTSEGQSIISAALSQNQGTRLSGVTVFR 187 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + R DA A + + +L Y PI +S L+ + + Sbjct: 188 FNPDGSFRDRIDARDANLEPGQWRLGGARIYSMTAAPIPHDSFLLSTNLTPSQVRNSFAT 247 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + SF+++ + + S S + Q+ L+ P +L +M L+AA+VSL F R Sbjct: 248 PETVSFWQLPEYIRSSQSSGLATAG-YRLQYQKLLARPFLLASMVLVAAAVSLRFFRFGG 306 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + + L LL +EDG Sbjct: 307 VQKMVLSGVAAGFLLYVLSKVTEDLSKAELMHPLAAAWLPVCVGGLIGFLALLHQEDG 364 >gi|149201834|ref|ZP_01878808.1| permease, YjgP/YjgQ family protein [Roseovarius sp. TM1035] gi|149144882|gb|EDM32911.1| permease, YjgP/YjgQ family protein [Roseovarius sp. TM1035] Length = 378 Score = 171 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 146/366 (39%), Gaps = 12/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + + + + + ++++ +IDL + P + + + ++P Sbjct: 17 ILERYFGRRFFVSFMGVTITMLVIMGLIDLMDELGDF---PELAFGQVLGIVLLKLPEAY 73 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IIP + ++ ++ +F L R+SE+V+ RA G S + L ++ +G+ + V NP+ Sbjct: 74 YEIIPLVMILASVALFLRLARSSEMVVLRASGRSALRGLLAPAAVALAIGLLGLAVGNPL 133 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K DL+ + D + W++ I A + + + Sbjct: 134 VAATAKRHHDLVNTYSGQTYSDLAIASEGLWLRQGGTAGQTVIYAARSSSDLSTLYGPSF 193 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI------DKNSTTLNIPIKMD 235 + + R A A + L+ + + ++ + D Sbjct: 194 YDFAPDGQPLRRISASTARLETGAWLLEDAKIWDLAENINPEAMARQEAQLSVPSDLTQD 253 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 +E+ K + ++ F R F + P+ LVA+ LI+A+++ Sbjct: 254 RILDSFGSPEYIPIWELPKFIDQLEEAG-FSARRYAIWFQSELAQPVFLVALVLISAALT 312 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V + GF L+ + G++G L + AA P + ++ + + IL Sbjct: 313 MGHTRGANVGLSVLTAVLLGFGLHYVRNFAHILGENGQLPILLAAWAPPVASLFIGLGIL 372 Query: 356 LQKEDG 361 L EDG Sbjct: 373 LHLEDG 378 >gi|126739400|ref|ZP_01755093.1| permease, YjgP/YjgQ family protein [Roseobacter sp. SK209-2-6] gi|126719500|gb|EBA16209.1| permease, YjgP/YjgQ family protein [Roseobacter sp. SK209-2-6] Length = 367 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 149/367 (40%), Gaps = 12/367 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y+ + + + L M LV +IDL+E + + + S + L P + Sbjct: 3 LDLYYARRFAQWFLVITGVLMTLVVLIDLSEQIRRF-DAFDLSAGQILGLTLLNAPAAMN 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +P I ++ IV+F L R+SELV++RAIG S + L V+ + L+G+ V +NPI Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLVAALIGVLAVSTLNPIV 121 Query: 125 TSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDFT 180 + L ++ G + W++ +P + A I D T Sbjct: 122 AATTNRYKSLSDSYRTGGPSVLSLTGEGLWLRQGSPSGQSVVHAAGYGGGREEIILYDVT 181 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVV------EYQYGRIPIDKNSTTLNIPIKM 234 +T K + R A A + L+ + + + Sbjct: 182 ILTYGKDSGPRTRTQARSARLEGSDWVLQDAKVWPLSAWTNPEISAGEHQELRIPTTLTQ 241 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 D + + S Y++ + + ++ F + E + + P L+AM L+ A+ Sbjct: 242 DRIRDRLDASDGISIYDLPQTIRELAEAG-FATKKHEVWYQVELARPFFLIAMVLVGAAF 300 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ +R + V + GF LY I + G++G + AA P + +I L++ + Sbjct: 301 TMRHTRFGGTGMAVLTAVLLGFGLYFIRNFAQILGENGEIPVALAAWAPPVASILLTLGL 360 Query: 355 LLQKEDG 361 LL EDG Sbjct: 361 LLHAEDG 367 >gi|114766152|ref|ZP_01445156.1| permease, YjgP/YjgQ family protein [Pelagibaca bermudensis HTCC2601] gi|114541612|gb|EAU44654.1| permease, YjgP/YjgQ family protein [Roseovarius sp. HTCC2601] Length = 364 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 81/366 (22%), Positives = 164/366 (44%), Gaps = 11/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + +L L L + + ++DL + + G + S + L +P + Sbjct: 2 ILHRYFARRFLTMFLSILTVFALFLALLDLVDQLRRFG--SDVSFGQVVYLTLLNLPSGL 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ +F + R+SELV+ RA G S L V ++++ +V ++NPI Sbjct: 60 YEILPLVMILATAALFLMMARSSELVVVRAAGRSGLTALAGPVAVALVISGVSVAILNPI 119 Query: 124 ATSGEKIGIDLIQQWKDNG--DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + DL + +K NG W++ + D I A + P+ + + + Sbjct: 120 VAATSRQSSDLTESYKSNGASTISIGREGLWLRQGGDEGDTVIRAARANPDATVLYEVSF 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIKMD 235 + + ++ + R +A+ A + + L+ + + L + D Sbjct: 180 VEYEAESGPLRRIEAEEAALQDGAWVLRDAKAWPLQSGRSPEGMSERFERLELPSDLTQD 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 G + + +S + +++ + + + F R + P+ LVAM L+AA + Sbjct: 240 GIRDRFGKPSSVAIWDLPEFIEGLEMAG-FSARRHVVWLQMELARPVFLVAMVLVAAGFT 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + + V + GF LY + + G++G L P+ AA IP I ++ L++ ++ Sbjct: 299 MRPARLGRTGLHVLAAVLLGFGLYYVRNFAQIMGENGQLPPILAAWIPPIASLLLALGLV 358 Query: 356 LQKEDG 361 LQ EDG Sbjct: 359 LQMEDG 364 >gi|260576762|ref|ZP_05844747.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] gi|259021014|gb|EEW24325.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] Length = 364 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 154/365 (42%), Gaps = 9/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + ++ L +LG ++ +ID + ++ S+ + +LAA +P + Sbjct: 2 TLSLYIARRFVWLLLGIILGFATILLLIDSLDQLRRLSG-QGISLGQATLLAAMNMPSSL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ I +F L R+SELV+ RA G S + L V+ ++L G V V+NP+ Sbjct: 61 YRILPLLMILAAITLFMGLARSSELVVVRASGRSGLRFLATPVLAALLFGAVAVAVLNPL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K L+ ++ +G+ +D W++ P I A + + T Sbjct: 121 VAATLKRYDTLLSKYAQDGESVLSINDDGLWLRQGGPDGQTVIHAARANADGTELFSVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDG 236 ++ D R +A A + + L + + + T L + D Sbjct: 181 LSFDAAGLPSARTEAREARLGDGAWALVDAKTWPLNLANPEASAARETGTRLPSDLTRDA 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + A+ S + + ++ ++ F + +PL+L AM LIAA ++ Sbjct: 241 IRDSFGTPAAISIWNLPSYIAGLERAG-FSARSHRVWLQTELALPLLLAAMVLIAAGFTM 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +RS + V + GF ++ + + G++G + AA P + ++ +LL Sbjct: 300 RPTRSGKTGTYVLLALLGGFGIFFLRNFAQVLGENGQIPIAMAAWSPPAAAVLFAVGLLL 359 Query: 357 QKEDG 361 EDG Sbjct: 360 HLEDG 364 >gi|254460215|ref|ZP_05073631.1| permease, YjgP/YjgQ family [Rhodobacterales bacterium HTCC2083] gi|206676804|gb|EDZ41291.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium HTCC2083] Length = 365 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 156/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + + + L LL + + +IDL E + + + S S L P I Sbjct: 2 ILHFYFARRFFRVFLTTLLIFLAFLTLIDLVEQMRRF-DSKDVSFSDIVFLTLFNAPGAI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QI+P + ++ + +F L RTSELV++R+ G S L + + ++GI TV + NPI Sbjct: 61 YQILPLVMILSAVSLFLTLARTSELVVTRSAGRSALVTLASPMCVAAVIGITTVTLFNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 S + I L Q++K W++ + I A + D Sbjct: 121 VASTTRQYITLEQEYKSQKKNTVSIGRDGLWLRQGDENGQTVIHALSTSDDMRTLFDARF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS------TTLNIPIKMD 235 + + ++ R AD A + N +L + + + + L + ++ Sbjct: 181 LQYNTDSQPKTRIIADEARLTNTGWQLIRAKHWSLDTSGNPEETAREIDVLMLPTTLTIE 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + A+ S +E+ + ++ F R + PL L+AM L+ AS + Sbjct: 241 NIRDSFSEPAAISIWEMDAYIEGLEEAG-FSTRRHKVWQQMEFARPLFLMAMVLVGASFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + + V I GF LY + + G++G L + AA P I +I L++ +L Sbjct: 300 MRHTRFGKAGVAVLAAIMMGFGLYYVRNFAQILGENGQLPTMIAAWTPPIASILLALGLL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHMEDG 365 >gi|148255227|ref|YP_001239812.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407400|gb|ABQ35906.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 365 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 85/360 (23%), Positives = 164/360 (45%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF +L + + +L+ ++D E+ + L + S A + RVP ++ Sbjct: 7 TLGRYFAGRFLVSAVGVFASIFVLLVLVDYIEMVRKTSGLASASALMVAETSLFRVPQLL 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R ELV++RA G+S WQ + P + +I+LG+ + NP+ Sbjct: 67 EKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMATTLYNPM 126 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ + + + W+ NP + I A + + T Sbjct: 127 SANLRELSKRMEAELFGAAPGGGVQDASGFWLNQINPDGSVIINAARSEQQGVRLTGLTL 186 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + R +A A + + + K V + P+D+ + L + + Sbjct: 187 FRFDTEKHFKDRIEAREATLEDGQWVFKSVRRFSLDAPPVDEPTFILPTSLTPAQVRNSF 246 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+++ + S S Q++ LI P +L AM ++AASVSL F R Sbjct: 247 STPETVSFWQLPSYIRSSESSGFATAG-YRLQYHKLIAQPFLLAAMVMLAASVSLRFFRM 305 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+ AA +PV + + LL +EDG Sbjct: 306 GGVQKMVLSGVGAGFLLYVLSKVTEDLSKAALMDPIVAAWLPVFVGGLTGFMALLYQEDG 365 >gi|218460846|ref|ZP_03500937.1| putative permease protein [Rhizobium etli Kim 5] Length = 362 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 145/362 (40%), Positives = 214/362 (59%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ YL TT +FL+GA + F++D +E +M LP Y+I G V+ A R+P Sbjct: 2 MFGTLSRYFFRRYLATTAWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ IPF+ L V + V LNR ELV++RA GIS+WQ + PFV GS+ LG+ T + Sbjct: 62 LILQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFVAGSLALGVLTTTAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLVDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGRVIMRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMTLIAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTLIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A IPV++ ++L ILL +E Sbjct: 301 RFNQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|126736392|ref|ZP_01752134.1| putative permease [Roseobacter sp. CCS2] gi|126714213|gb|EBA11082.1| putative permease [Roseobacter sp. CCS2] Length = 364 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 85/365 (23%), Positives = 154/365 (42%), Gaps = 9/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF +L++ L + +++ +DL + + G + + +L+ +P Sbjct: 2 ILHRYFASRFLRSFLGVGMVFFLIMLFVDLVDQLRRFGSK-DATFVDLLMLSLLNIPQAF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ I +F +L+R+SE+V++RA G S L + ++L+GIF V V+NPI Sbjct: 61 YAILPLIMILATIALFLSLSRSSEMVVTRAAGRSALHSLLAPLTVALLVGIFAVGVMNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK-QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 K + + W++ N I A+ + + D T + Sbjct: 121 VAGTSKEFEARSDALRGDSSVLSFGSSGLWLRQGNATGQTVIRAQSANLDGTLLTDVTFL 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN------IPIKMDG 236 T I R A A + L+ +Q + + S L+ + D Sbjct: 181 TFAPDGNPITRISAASAELTTGAWVLRDAKSWQLAGVTTPEASAQLDAERTVQSTLTPDQ 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + +S +E+ + + F R F+ + +P+ LV+M LI AS +L Sbjct: 241 IRDSFGTPSSIPIWELPAFIDRLQTAG-FSAQRHLVWFHTELALPIFLVSMVLIGASFTL 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + ++V + + F+ Y I + G++G L + AA P I +S+ LL Sbjct: 300 RHQRGGRTGMMVMFAVLLAFVTYFIRNFAQVLGENGQLPVLLAAWAPPFAAIGISMGFLL 359 Query: 357 QKEDG 361 EDG Sbjct: 360 HHEDG 364 >gi|296116657|ref|ZP_06835267.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295976869|gb|EFG83637.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 371 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 91/367 (24%), Positives = 165/367 (44%), Gaps = 10/367 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + + L + L+ + D ++ ++ PN S + +A +P + Sbjct: 6 TLSLYIARQFTYAVLAVIAFLTGLITLFDFIDLLRRVSSRPNVPASLVSEIAVLHIPFAM 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+PF L+ I+ F+ L R+SELV++RA GIS WQ L V ++L+G + VI+P+ Sbjct: 66 LEILPFGVLLGGIICFWRLARSSELVVARAAGISAWQFLAGPVGCALLIGALSTTVISPL 125 Query: 124 ATSGEKIGIDLIQQWKDN---GDKQKSDIIPWMQISNPQ------QDIFIGAKKILPENH 174 +++ + L QQ+ S WM+ S+ I ++ Sbjct: 126 SSAMYRRAEILDQQYLRESTVKTINMSGGALWMRQSDSGLVDHGVAIIHARRVRLRDNVM 185 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + +D ++ ++ R +A + N + L+ P+D TL + + Sbjct: 186 RISGISIFRLDGQDHMLARIEAGHGYLGNGRWVLEGARLLHPDENPVDMGHMTLRADLTL 245 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 G Q + S + + + N+S F + R +F L+ +P++ M L+AA Sbjct: 246 AGVQDSLASPNTLSVWALPGFIKLLNRSG-FSSIRHRLRFQSLLTLPVLCGTMALVAAGF 304 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S+ +R +++ G+ +GF L+ I I FG+SG L PV AA P + L++ + Sbjct: 305 SMRPARRGGVVRMISLGVGAGFALFAISKIAAQFGESGALPPVLAAWAPTGAGLCLAVSL 364 Query: 355 LLQKEDG 361 LL EDG Sbjct: 365 LLHLEDG 371 >gi|310816138|ref|YP_003964102.1| putative permease [Ketogulonicigenium vulgare Y25] gi|308754873|gb|ADO42802.1| putative permease [Ketogulonicigenium vulgare Y25] Length = 360 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 88/365 (24%), Positives = 153/365 (41%), Gaps = 13/365 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF Y K L G +++ +I+L E + G ++ L VP + Sbjct: 2 ILHRYFALRYFKAFLGTAAGFFLMLVMIELIEQLRRFGGQSDFPA-----LTLLNVPATL 56 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q++P I ++ +V+F L R+SE+V++RA G S L V+ +L+G+ V+ NPI Sbjct: 57 YQVLPLIVIISALVLFLGLARSSEMVVTRAAGRSALIALIAPVLIVMLMGLLAVMAFNPI 116 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDII-PWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 S + + I + + W++ + I A P+ T + Sbjct: 117 VASTSREYDNRIATITGSSRILQIGGDAIWLRQGDEDGQSVIRAAASDPDGTTLRGVTML 176 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL------NIPIKMDG 236 + R DA A + D +++ + + S T+ + D Sbjct: 177 SYTNDGIPARRIDAAAATLSGDHWQMQNAKVWPLNTGQNPEASATIHATLAVPSNLSPDE 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + AS S +E+ + + F R + +P LVAM LIAA +L Sbjct: 237 IRNSFGNPASISVWELPAFIKRMEDAG-FTAQRQIVHLQSELALPAFLVAMMLIAAVFTL 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + ++V + + F LY I + + G++G L P+ AA + + I+L + +LL Sbjct: 296 RHQRGGRTGMMVLFAVLISFSLYFIRNLAQILGENGQLTPLLAAWVTPLAAIALGVGLLL 355 Query: 357 QKEDG 361 EDG Sbjct: 356 HLEDG 360 >gi|300023218|ref|YP_003755829.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525039|gb|ADJ23508.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 364 Score = 169 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + ++ + L +L+F+ID E+ G+ + +A R+P I Sbjct: 6 TLTRYIARMFIVAIVTTLTVCALLIFMIDFVELLRMAGKYGAVPGTTLLRIALLRLPAYI 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +I F LV +I LNR SEL + RA G+S+WQ L P + + +GIF + V NP+ Sbjct: 66 EFLIGFAVLVGSISALIYLNRKSELAVMRAGGMSVWQFLGPGLFVGLAVGIFAMAVFNPL 125 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A+ G L + N + W++ + + +GA + Sbjct: 126 ASRGRATSEKLYAKAFGNEANLLRAQGGGSWIRQNGADGESVLGAAAASNQGLTLTGVLV 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D++ R DA A + + +L+ + G+ P S L+ + D Q Sbjct: 186 FAYDREGHFSERIDAGSAELKDGYWELQDAWVTRLGQEPEKFKSYLLSTYLTPDRVQDAL 245 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S SF+++ + + ++K+ R Q+ L+V P++ +AM L+AA+VSL RS Sbjct: 246 GTVFSISFWDLPELIQAADKA-KLSTERLRVQYQSLLVRPMLCLAMVLLAATVSLRSFRS 304 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +VA G+ G + + I + G +G+ AA +PV+L +++S +LL +EDG Sbjct: 305 GGIQTMVATGMIGGVGFFLLSEIARQIGIAGLAPAWVAAWMPVVLVLAISTTVLLHQEDG 364 >gi|296445732|ref|ZP_06887685.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] gi|296256712|gb|EFH03786.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] Length = 361 Score = 169 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + KT L L+FV+ E+ + G++P A++ RVP Sbjct: 5 TLSRYLAARFAKTILAIFATMFCLMFVVYFVELLRRAGDIPQAGADTVALMTILRVPATA 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+PF L + F +L R ELV++RA G+S+WQ L P ++++G+ +V + NP+ Sbjct: 65 ETILPFAVLFGAMTTFVDLTRKLELVVARASGVSVWQFLFPPAFVALVIGVVSVTLYNPV 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + + + D W++++ + A + + Sbjct: 125 SAVMKQRSDQMELELFGVQGSVRVDHSKWLRLTGVDGTAILHATDYQAGGARLTEVSVNV 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K+ + R +A A + L++ G S L + + + Sbjct: 185 YSKEGLFLERVEAARARLLAGVFVLEEARVNAPGEESRTVGSYLLATDLTPEQLVTATTP 244 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 F+ +++ + + QF L+ PL+LVAM L+AAS SL F R Sbjct: 245 PQGAPFWSLLELGEKTADAG-LDPTGYILQFQTLLARPLLLVAMVLVAASFSLRFFRMGG 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 V+ G+ +GF+LY + + G +G++ P+ AA P ++ L + LL EDG Sbjct: 304 IARTVSGGVVAGFVLYIVTKLFSDLGGAGVISPLVAAWSPALVGSMLGAVSLLYSEDG 361 >gi|222148152|ref|YP_002549109.1| hypothetical protein Avi_1542 [Agrobacterium vitis S4] gi|221735140|gb|ACM36103.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 362 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 133/362 (36%), Positives = 206/362 (56%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RYF K Y T +F++G ++F+ID +E+ + + S+ +L R+P Sbjct: 2 MLNTLSRYFLKRYAITVFWFVIGVAAIIFLIDFSEVSGRFSDNEQSSLFGVFLLTLMRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L++QQ +PFI L +V LNR SELVI+RA GIS+WQ + PF++G+ +LG T L+I Sbjct: 62 LLLQQTVPFIALFSGMVTLITLNRRSELVIARAAGISVWQFMFPFLLGAFMLGCATSLLI 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIP-WMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G+K L ++ D G + WM+ ++D IGA +L + + Sbjct: 122 NPLAALGQKQAATLEAEYSDPGKASNNKNSVPWMRQITGKEDTIIGATSVLEDGTLLMQA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D + +I R+DA A + + LK VVE + G P + S ++ +K + Q+ Sbjct: 182 VFIHFDGQGRITSRQDARTAKLQDGYWLLKDVVETKPGETPKRETSAQVSTNLKQEFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + +FYE+ +K++ + + ETQF+ L+ P + VAMTLIAA+VSL+FS Sbjct: 242 RLAQPDTVAFYELSQKIAVAKSYGV-STKNLETQFHTLLSTPFLFVAMTLIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGF+LY ++K+FG SG++ P A +PVI+ +L ILL +E Sbjct: 301 RFNQSRSVILGGIISGFVLYVATVLVKAFGSSGVVPPFVATWVPVIVATALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|89054304|ref|YP_509755.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] gi|88863853|gb|ABD54730.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] Length = 364 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 150/366 (40%), Gaps = 11/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL Y + +L + L M ++ ID+ + ++G + S LA +P I Sbjct: 2 ILHLYIARRFLVSFGIVLAVFMAILLPIDMADQLRRIG--SDQGFSAVLQLALLNLPRSI 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P ++ +V+F L RTSELV+ RA G S + V+ ++++G ++L++NP+ Sbjct: 60 TGLMPLFVMLATLVLFLGLARTSELVVVRAAGRSALKSAASPVIVALIIGGLSLLILNPL 119 Query: 124 ATSGEKIGIDLIQ--QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + ++ + W++ + I A + D + Sbjct: 120 VATTARQYDLTLARLSGLESRSVSVTGEGFWLRQGTGSEQTVIRASATNSDGTHLFDASF 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN------STTLNIPIKMD 235 T D ++ R DA A++ L V + + + + TL + + Sbjct: 180 FTFDADGALLERMDAREAVLARAAWTLTDVKRWPLAQSDNAEADAELFPTLTLPSTLTPE 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + +E+ + N + F + T F + PL+L AM LI A + Sbjct: 240 QIRDSFGNPETVPIFELPGFIRQLNDAG-FAALQHRTWFQMQLSSPLLLAAMVLIGAGFT 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + ++V I GF + + + G++G L A P I I L+I L Sbjct: 299 MRHTRFGKTGVMVLGAILLGFGVVFLRRFAEVLGETGQLAASLVAWTPPIAAILLAIGFL 358 Query: 356 LQKEDG 361 L EDG Sbjct: 359 LHTEDG 364 >gi|146340303|ref|YP_001205351.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193109|emb|CAL77120.1| putative permease [Bradyrhizobium sp. ORS278] Length = 365 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 88/360 (24%), Positives = 168/360 (46%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF +L + + +L+ ++D E+ + L + S A + RVP ++ Sbjct: 7 TLGRYFAGRFLVSAVGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRVPQLL 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R ELV++RA G+S WQ + P + +I+LG+ + NP+ Sbjct: 67 EKMMPFCVLIGAMTCYLALSRRLELVVARAAGVSAWQFIAPALASAIVLGLMATTLYNPM 126 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ + + + + W+ NP + I A + + T Sbjct: 127 SANLRELSKRMEAELFGSAPGGGVQDASGFWLNQLNPDGSVIINAARSEQQGVRLTGLTL 186 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D KN+ R +A A + + + K V + P+D+ + L + + Sbjct: 187 FRFDTKNRFKDRIEAREASLEDGQWVFKSVRRFSLDAPPVDEPTFILPTTLTPAQVRNSF 246 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+++ + S S Q++ LI P +L AM ++AASVSL F R Sbjct: 247 STPETVSFWQLPSYIRSSESSGFATAG-YRLQYHKLIAQPFLLAAMVMLAASVSLRFFRM 305 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + + LL +EDG Sbjct: 306 GGVQKMVLSGVGAGFLLYVLSKVTEDLSKAALMDPIAAAWLPVFVGGLTGFMALLYQEDG 365 >gi|327188011|gb|EGE55241.1| putative permease protein [Rhizobium etli CNPAF512] Length = 362 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 144/362 (39%), Positives = 214/362 (59%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ YL TT +FL+GA + F++D +E +M LP Y+I G V+ A R+P Sbjct: 2 MFGTLSRYFFRRYLATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ IPF+ L V + V LNR ELV++RA GIS+WQ + PF+ GS+ LG+ T + Sbjct: 62 LILQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGVLTTTAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMTLIAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTLIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A IPV++ ++L ILL +E Sbjct: 301 RFNQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|299133713|ref|ZP_07026907.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298591549|gb|EFI51750.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 360 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 171/358 (47%), Gaps = 2/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF + ++ +L LG +L+ ++D E+ + +P S A + RVP ++ Sbjct: 5 TLARYFARRFIIASLAVFLGIFLLLVLVDYIEMVRRTSSIPTASAIMVAETSLFRVPQLL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R+ ELV++RA GIS WQ + P +V ++L+G+ +V NPI Sbjct: 65 EKLMPFCILIGAMSCYLALSRSLELVVARAAGISAWQFITPALVAALLMGVLATVVYNPI 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ ++ + NG Q + W+ + I A + T Sbjct: 125 SAAMQERSKEMEAKLFSNGGVQNVEQS-WINQVTSEGQSIISAALSQNQGTRLSGVTVFR 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + R DA+ A + + +L + P+ +++ L + + Sbjct: 184 FNPDGSFRDRIDANEANLEPGEWRLGGARIHSMTAAPVIQDNLLLKTNLTPAQVRNSFAT 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + SF+++ + S S + Q+ L+ P +L +M L+AA+VSL F R Sbjct: 244 PETVSFWQLPGYIQSSASSGLATAG-YRLQYQKLLARPFLLASMVLVAAAVSLRFFRFGG 302 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + L LL +EDG Sbjct: 303 VQKMVLSGVAAGFLLYVLSKVTEDLSKAELMYPLAAAWLPVCVGGLTGFLALLHQEDG 360 >gi|27379217|ref|NP_770746.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352368|dbj|BAC49371.1| bll4106 [Bradyrhizobium japonicum USDA 110] Length = 363 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 81/360 (22%), Positives = 161/360 (44%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF ++ L +L+ ++D E+ + L + S A + RVP ++ Sbjct: 5 TLGRYFAGRFVVAALGVFASIFLLLVLVDYIEMVRKTSGLASASAIMVAETSLFRVPQLL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++ PF L+ + + L+R ELV++RA G+S WQ ++P + ++L+G+ + NP+ Sbjct: 65 EKLTPFCMLIGAMTCYLALSRRLELVVARAAGVSAWQFISPALGSALLIGVIATVAYNPM 124 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ + + + + W+ I A + + T Sbjct: 125 SANLRELSKRMEAELFGSAPGGGIQDASGFWLNQVTNDGQTIINAARSEQQGVRLTGLTL 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + R +A A + + + V + PI++ + + + Sbjct: 185 FRFDTEQHFKERVEAREAELEVGQWIFRNVRRFSLDGPPIEQAVLAIPTTLTEAQVRNSF 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+++ + S S Q++ L+ P +L AM ++AASVSL F R Sbjct: 245 STPETVSFWQLPSYIRSSESSGFATAG-YRLQYHKLLAQPFLLAAMVMLAASVSLRFFRM 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV++ L LL +EDG Sbjct: 304 GGVQKMVLSGVGAGFLLYVLSKVTEDLSKAELMHPIAAAWLPVVVGGLTGFLALLYQEDG 363 >gi|254473284|ref|ZP_05086681.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] gi|211957400|gb|EEA92603.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] Length = 363 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 100/360 (27%), Positives = 182/360 (50%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y K +LK+ L L A +L+ + D+ E+ + G+ +S+ R A ++A RVPL++ Sbjct: 5 TLSLYISKRFLKSILALFLFAAVLILLFDVLELVRRGGDREGFSLLRIAAISALRVPLLL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q+IPF L +I F L+R+ ELV++RA GIS+WQ P ++ + +GI +V+ NP Sbjct: 65 EQVIPFAVLFGSIWAFVTLSRSLELVVARAAGISVWQFTAPALLTGLFIGIASVIGYNPG 124 Query: 124 ATSGEKIGIDLIQQWKD--NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A ++ ++ + + W++ + + + A+ I + T Sbjct: 125 AVYLQQKSDEVAEGLFSVEQTYLLEGSGEVWLRQNGTDGESVLHARHIGGQGATLNGVTI 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + D++ + R +A A++ +L V Y P ++ +++ + ++ Sbjct: 185 FSFDRQGEFSERIEARRAVLAEGMWRLTDAVVYALDTDPQHYDNYSVSTFLTPTEVKESI 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S SF+ + + + S ++ + YR Q+ L+ PL+LVAM +IAA+VSL SR Sbjct: 245 GSPESISFWSLPRFIELSQRAGLP-AYRYSLQYQTLLAKPLLLVAMIVIAAAVSLRVSRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++ +GI +GF+LY + I K G +GI+ AA P + + + ILL +EDG Sbjct: 304 GGIGRLIIWGIIAGFVLYAVSEISKDLGGAGIVPTAVAAWAPGVFGVLMGFTILLNQEDG 363 >gi|86357091|ref|YP_468983.1| putative permease protein [Rhizobium etli CFN 42] gi|86281193|gb|ABC90256.1| putative permease protein [Rhizobium etli CFN 42] Length = 362 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 144/362 (39%), Positives = 215/362 (59%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ YL TT +FL+GA + F++D +E +M LP Y+I G V+ A R+P Sbjct: 2 MFGTLSRYFFRRYLATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ IPF+ L V + V LNR ELV++RA GIS+WQ + PF+ GS++LG+ T + Sbjct: 62 LILQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLVLGVLTTTAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMTLIAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTLIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A IPV++ ++L ILL +E Sbjct: 301 RFNQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|241203948|ref|YP_002975044.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857838|gb|ACS55505.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 362 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 141/362 (38%), Positives = 214/362 (59%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ YL TT +FL+G + F++D +E +M LP Y+I G ++ A R+P Sbjct: 2 MFGTLSRYFFRRYLVTTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGVLMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ +PFI L V + V LNR ELV++RA GIS+WQ + PF+ GS++LG+ T+ + Sbjct: 62 LILQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLVLGLLTMAAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQESGTKLIDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGQVILRQDAATAKLEDGYWQLNNVVERKPGEIPVRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMT IAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTFIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A IPV++ ++L ILL +E Sbjct: 301 RFNQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|325292486|ref|YP_004278350.1| permease protein [Agrobacterium sp. H13-3] gi|325060339|gb|ADY64030.1| putative permease protein [Agrobacterium sp. H13-3] Length = 362 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 140/359 (38%), Positives = 217/359 (60%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF K YL T ++FLLG ++++ D +E +M +P YS+ L A R+PLI+ Sbjct: 5 TLARYFLKRYLITAIWFLLGVSAIIYLADFSETARRMSSVPGYSVPGALGLTALRLPLIL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ IPFI L V + +LNR ELV++RA G+S WQ + PFV+G++ LGI +VLV+NPI Sbjct: 65 QQTIPFIALFVGMTTLISLNRRYELVVTRAAGVSAWQFILPFVLGAVFLGILSVLVLNPI 124 Query: 124 ATSGEKIGIDLIQQWKDNGD-KQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G+ + + W++ G ++ DIIPWM+ S+ QD IGAK + D I Sbjct: 125 AAWGQNRSLSMEAGWRNEGSGGRQQDIIPWMRQSSGGQDTIIGAKSFEDNGTMLLDVVLI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +DK I+ R+DA A + + L V E + G +P+ + ST ++ ++ + Q+ Sbjct: 185 HLDKDGNIVSRQDAKSAKLEDGYWLLNGVAETRAGHVPVRQESTRISTNLRREFVQERMT 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 Q + +F+++ K+ + + ETQ++FL+ PL+LVAMTLIAA+VSL+FSR Sbjct: 245 QTETVAFFDLSHKIEVAKSFG-LSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSRFA 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q R ++ GI SGF+LY + ++++FG G++ P A +PVI+ ++L ILL +EDG Sbjct: 304 QSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQEDG 362 >gi|15888447|ref|NP_354128.1| hypothetical protein Atu1107 [Agrobacterium tumefaciens str. C58] gi|15156139|gb|AAK86913.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 362 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 136/361 (37%), Positives = 217/361 (60%), Gaps = 2/361 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RYF K YL TT++F+LG ++++ D +E +M LP YS+ L A R+PL Sbjct: 3 FNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPL 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+QQ +PFI L V + +LNR ELV++RA GIS WQ + PFV+G++ +GI +V+V+N Sbjct: 63 ILQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLN 122 Query: 122 PIATSGEKIGIDLIQQWKDN-GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 PIA G+ + + +++ G ++ +IIPWM+ S+ +D IGAK + D Sbjct: 123 PIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSGGKDTIIGAKSFEDNGTMLLDVV 182 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 I +DK I+ RKDA A + + L V E + G +P+ + S ++ ++ + Q+ Sbjct: 183 LIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQER 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 Q + +F+++ K+ + + ETQ++FL+ PL+LVAMTLIAA+VSL+FSR Sbjct: 243 MTQTETVAFFDLSHKIEVAKSFG-LSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 Q R ++ GI SGF+LY + ++++FG G++ P A +PVI+ ++L ILL +ED Sbjct: 302 FAQSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQED 361 Query: 361 G 361 G Sbjct: 362 G 362 >gi|254418566|ref|ZP_05032290.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] gi|196184743|gb|EDX79719.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] Length = 378 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 87/363 (23%), Positives = 155/363 (42%), Gaps = 5/363 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G + RY L++ L LV +ID E+ +G + S R L A + P + Sbjct: 17 GRIERYVLIQQLRSLGVALAVISALVMLIDFVEVSRGVGSDQDLSALRILGLVALKSPSV 76 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I Q++PF+ L + + LNR SELV RA G+S W+ + P +++LG+ TV V+ P Sbjct: 77 IVQLLPFVFLFGTLAAYIGLNRRSELVAMRAAGVSAWRFVLPAAGMALVLGVLTVTVLGP 136 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 +A++G+ + + S+ W++ + Q+ + I A + N D T Sbjct: 137 LASAGDGLWQRERARISGTAPGASSNDAIWLREGDDQRQMIIRAGRQDRANARLLDVTFF 196 Query: 183 TIDK----KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 R DA A + + +L V G+ + +S L + + Sbjct: 197 IYTTDAEGNRDFSERIDARSAALSAGRWRLTDAVGASIGQRAVTYSSLDLLSSLADEEAF 256 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S F+ + ++ + +F L+V PL+ AM+++AA+ SL Sbjct: 257 ERFARPQSTPFWSLPNQIKRIEDAGFASTA-YRLRFQQLLVTPLVFAAMSILAAAFSLRL 315 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + GF + + + G + ++ P AA +P ILT + +L Sbjct: 316 MRLGDLAKMSVAAVVLGFAFFFLNQFSSAMGSAEVVPPFVAAWLPPILTALAAFTLLFYT 375 Query: 359 EDG 361 EDG Sbjct: 376 EDG 378 >gi|323137698|ref|ZP_08072774.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] gi|322396995|gb|EFX99520.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] Length = 361 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 86/358 (24%), Positives = 158/358 (44%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + RYF +++T L L+FV+ E+ + + P A++ A +VP Sbjct: 5 TITRYFAWRFMRTILAIFFTIFCLMFVVVFVEMLRRASDNPQAGAGMVALMTAMKVPAAA 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+PF L ++ F +L R EL+++RA G+S+WQ + P V+ ++L+G+F+V V NP+ Sbjct: 65 EMILPFAVLFGSMATFVDLTRKLELIVARAAGMSVWQFITPPVLTALLIGVFSVAVYNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + S ++ + + + D W++ + A + Sbjct: 125 SASMKQRSDQMELELFGVPGSLRIDHGVWLRQHGVDGLAVMHAMGTAKGGTELTFVSVNI 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + R +A A + L + G S L + + + Sbjct: 185 YSPNGGFLERVEAQSARLEPGVWVLNGAIVSAPGEPARPVASYMLATDLTPEQAAAATTP 244 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 F+E+ + + + ++ + QF L+ PL+LVAM L+AAS SL F R Sbjct: 245 PQGTPFWELPEMTARTTEAGLDSTG-YRLQFQTLLARPLLLVAMVLVAASFSLRFFRFGG 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++ G+ +GF+LY + ++ G +G++ P+ AA P ++ L L LL EDG Sbjct: 304 VAKTLSGGVAAGFVLYIVTKVLSDLGGAGLISPLVAAWSPALVGSMLGTLTLLYSEDG 361 >gi|190891135|ref|YP_001977677.1| permease [Rhizobium etli CIAT 652] gi|190696414|gb|ACE90499.1| putative permease protein [Rhizobium etli CIAT 652] Length = 362 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 143/362 (39%), Positives = 214/362 (59%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ Y+ TT +FL+GA + F++D +E +M LP Y+I G V+ A R+P Sbjct: 2 MFGTLSRYFFRRYVATTGWFLIGASAIAFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ IPF+ L V + V LNR ELV++RA GIS+WQ + PF+ GS+ LG+ T + Sbjct: 62 LILQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGVLTTTAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMTLIAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTLIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A IPV++ ++L ILL +E Sbjct: 301 RFNQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|222085452|ref|YP_002543982.1| permease protein [Agrobacterium radiobacter K84] gi|221722900|gb|ACM26056.1| permease protein [Agrobacterium radiobacter K84] Length = 361 Score = 167 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 142/358 (39%), Positives = 213/358 (59%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y+ TTL+F LG LV++ID +E ++ LP Y++ G ++ A R+P I+ Sbjct: 5 TLGRYFFTRYIITTLWFFLGVTSLVYLIDFSETAGRLAGLPGYTVKIGLLMTAVRLPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ +PFI L V + V LNR ELVI+RA GIS+WQ + PFVVG+ +G+ T+L +NP+ Sbjct: 65 QQTVPFIALFVGMTVLIALNRRRELVIARAAGISVWQFMTPFVVGAFCVGLLTMLALNPV 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G++ + + + + + IPW++ S+ + DI IGAK +L + I Sbjct: 125 AAWGQRQAETMEADLRGDPSYRNTLSIPWLRQSDGKSDIIIGAKAVLDNGTTLMNVVFIH 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + II R+DA A + N L VVE G IP K++T + +K D + Q Sbjct: 185 FDSQGNIILRQDAQSAKLENGYWLLNSVVERAPGEIPAHKSTTQVRTNLKQDFVSERLAQ 244 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + +FY++ +++ + I ETQF+ L+ P +LVAMTLIAA+VSL+FSR NQ Sbjct: 245 PETIAFYDLSNRIAIAKSFGI-STKALETQFHSLLSQPFLLVAMTLIAATVSLKFSRFNQ 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 R ++ GI SGF+LY + ++K+FG SG++ P A IPVI+ ++ ILL +EDG Sbjct: 304 SRSVILGGILSGFVLYVVTVLVKAFGSSGVVPPFVATWIPVIVALAFGATILLHQEDG 361 >gi|182677644|ref|YP_001831790.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633527|gb|ACB94301.1| permease YjgP/YjgQ family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 362 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 96/358 (26%), Positives = 155/358 (43%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY +L L +++VIDL E+ + G P + S A L+ R P + Sbjct: 6 TLGRYLSSRFLFMILAVFGTIFSMIYVIDLVEMLRRAGNRPGATASLIAFLSFLRAPSVS 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +QI+PF L + F NL R EL+++RA GISIWQL+ P + ++ +GIF+V + NPI Sbjct: 66 EQILPFCVLFGTMATFINLTRRLELLVARAAGISIWQLMMPPLGIALAIGIFSVTLYNPI 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + Q++ W++ ++ I A+ + T T Sbjct: 126 SAMMKHRADGIETELFGGIGGQETKGGLWIRQNSVDGQAIIRAETVEAGGSRLGGVTLYT 185 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K R +A A + ++ + G + L + + Sbjct: 186 YGKDGSFEARIEARHAKLVPGVWQMTEARIIVPGEEIQEAGLYLLATNLTPGEVSENIVT 245 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S F+E+ + + + + R QF L+ PL +AM LIAA+ SL F R Sbjct: 246 PESVPFWELQSFRAATELAG-LDSTRYRLQFQLLLARPLFFIAMVLIAAAFSLRFFRFGG 304 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +V G +GF+LY + G SG+L AA P ++ L L LL +EDG Sbjct: 305 ITKMVCGGAGAGFVLYIVSKFTGDLGTSGLLSAPIAAWSPAVVASMLGALALLNQEDG 362 >gi|116251334|ref|YP_767172.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255982|emb|CAK07063.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 362 Score = 166 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 141/362 (38%), Positives = 213/362 (58%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ YL TT +FL+G + F++D +E +M LP Y+I G ++ A R+P Sbjct: 2 MFGTLSRYFFRRYLVTTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGVLMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ +PFI L V + V LNR ELV++RA GIS+WQ + PF+ GS+ LG+ T+ + Sbjct: 62 LILQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGLLTMAAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGQVILRQDAATAKLEDGYWQLNTVVERKPGEIPVRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMT IAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTFIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A IPV++ ++L ILL +E Sbjct: 301 RFNQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|83953613|ref|ZP_00962334.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. NAS-14.1] gi|83841558|gb|EAP80727.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. NAS-14.1] Length = 365 Score = 166 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 156/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + ++ + L+ ++D+ + + + R + + P + Sbjct: 2 ILHLYFARRFIMGFILISAVLFSLLVLVDMVDQARRFSSY-DIGWLRLFGMTLLKTPETM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ +V+F +L R+SELV++RA G S L + + ++G+ V ++NPI Sbjct: 61 NLILPLIMILATVVLFLSLARSSELVVTRAAGRSALSALQAPIWVAFIIGVMAVGMLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K I L + G SD W++ + + I A + + + D T Sbjct: 121 VAATAKRYIQLSDSIRAGGTSVLSVSDEGLWLRQGSDEGQTVIRAWRSNKDASVLYDVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI------DKNSTTLNIPIKMD 235 ++ ++ R +AD A + + L + ++ TL + +D Sbjct: 181 LSYAPESGPARRIEADSAALEDGIWTLTDAKSWPLEVGVNAEGAAETFDTLTLPSTLTLD 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S Y++ + + F R + + P LVAM L+A++ + Sbjct: 241 RIRDSITDPGAVSIYDLPDYIKQLELAG-FSPRRHKVWLQTELARPFFLVAMVLVASAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V + GF LY I + + G++G + + AA P + +I L++ +L Sbjct: 300 MRHTRFGGTGVAVLASVLMGFGLYFIRSFAQILGENGQIPVLLAAWAPPVASILLALGLL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHSEDG 365 >gi|188583149|ref|YP_001926594.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346647|gb|ACB82059.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 362 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 87/358 (24%), Positives = 158/358 (44%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF +++T L L LV+ +D E+ + G+ S A LA R P + Sbjct: 6 TLGRYFAWRFVRTILGVFLTVFALVYTLDFVELLRRAGDSEGASTGLMAQLALYRTPAVA 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + ++PF L ++ L+R ELV++RA GIS WQ L P ++ +G + NP+ Sbjct: 66 ESVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGAFVALAIGALAIGAYNPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ ++ + K + W++ + I A+ + T Sbjct: 126 SAALKQRSSEIEAKIFAKSTKAGTGKDLWLRQRSVDGQAIIRAETAVEGTTTLAGVTVFQ 185 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + +A A +++ +L+ V P + + ++ Sbjct: 186 FDDAGVFTAQIEAARATLHDGWWELRDVRVLTRDEPPESHEVYLVASTLDPSQIRQRFTP 245 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S F+++ + ++ ++ R Q+ L+ PL+ +AM L+AA+VSL F R Sbjct: 246 PESVPFWQLPETIARHERAG-LDATRYRLQYDVLLATPLLYLAMVLVAATVSLRFFRFGG 304 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +V G+ +GF+LY +M+ G SG++ P AA P ++ L L LL +EDG Sbjct: 305 VGKLVLGGVSAGFVLYVARQVMEGLGASGMVAPTVAAWFPAVVGSLLGTLTLLYQEDG 362 >gi|307946742|ref|ZP_07662077.1| permease [Roseibium sp. TrichSKD4] gi|307770406|gb|EFO29632.1| permease [Roseibium sp. TrichSKD4] Length = 364 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF + K+ L L A +L+F+ D+ E+ + G+ +++ R A+++ RVPL++ Sbjct: 6 TLAIYFSARFFKSILGLFLLAAVLIFLFDVLELVRRGGDQEGFTVVRVALISILRVPLLL 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q+IPF L +I+ F L+R ELV++RA GIS+WQ P VV +++G +V+ NP+ Sbjct: 66 EQVIPFAVLFGSILAFVTLSRALELVVARASGISVWQFAAPAVVVGLIIGTLSVVAYNPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + + + ++ W++ + + AK++L D T Sbjct: 126 AVWLQHRSDEAAAGLFGSEQSFLLQTTQDVWVRQDGLDGESVLLAKQLLDGGTRLLDVTI 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK+ R +A A + + L+ V Y R P ++ + ++ Sbjct: 186 FAFDKEGSFKERVEAATARLGDQIWFLEDVTVYTTERDPQQYGRYEVSTYLTATEVRESI 245 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S SF+ + + + + + + YR Q+ L+ PL+L AM +IAA+VSL SR Sbjct: 246 GSPESISFWSLPRFIELARNAGLP-AYRYTLQYQTLLARPLLLTAMIIIAAAVSLRVSRF 304 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++ GI +GF+LY + + K FG +GI+ P+ AA P I + + + ILL++EDG Sbjct: 305 GGLGSMILGGIVAGFVLYVLSELAKDFGGAGIVPPIVAAWAPGIFGVLMGLTILLKQEDG 364 >gi|225627183|ref|ZP_03785221.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|225618018|gb|EEH15062.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 397 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 115/359 (32%), Positives = 194/359 (54%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ TLYFLLG L ++D E +++ LP Y++ L+A RVP I+ Sbjct: 40 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 99 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+ Sbjct: 100 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 159 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 160 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 219 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D++ I R DA A + + +L V+ + G+ P + ++ ++ + ++ Sbjct: 220 QFDEQKNIKDRYDARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLA 279 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 280 SPETIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 338 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + P AA +PV++ + LL KEDG Sbjct: 339 QSGAMILGGVIAGFVLYVVSVLVKAFGDAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 397 >gi|83942393|ref|ZP_00954854.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. EE-36] gi|83846486|gb|EAP84362.1| permease, YjgP/YjgQ family protein [Sulfitobacter sp. EE-36] Length = 365 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 154/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + ++ + L+ ++D+ + + + R + P + Sbjct: 2 ILHLYFARRFIMGFILISAVLFSLLVLVDMVDQARRFSSY-DIGWLRLFGMTLLNTPETM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ +V+F +L R+SELV++RA G S L + + ++G+ V ++NPI Sbjct: 61 NLILPLIMILATVVLFLSLARSSELVVTRAAGRSALSALQAPIWVAFIIGVMAVGMLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K I L + G SD W++ + + I A + + + D T Sbjct: 121 VAATAKRYIQLSDSIRAGGTSVLSVSDEGLWLRQGSDEGQTVIRAWRSNKDASVLYDVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI------DKNSTTLNIPIKMD 235 ++ + R +AD A + N L + ++ TL + +D Sbjct: 181 LSYAPEGGPARRIEADSAALENGIWTLTDAKSWPLEVGVNAEGAAETFDTLTLPSTLTLD 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S Y++ + + F R + + P LVAM L+A++ + Sbjct: 241 RIRDSITDPGAVSIYDLPDYIKQLELAG-FSPRRHKVWLQTELARPFFLVAMVLVASAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + V + GF LY I + + G++G + + AA P + +I L++ +L Sbjct: 300 MRHTRFGGTGVAVLASVLMGFGLYFIRSFAQILGENGQIPVLLAAWAPPVASILLALGLL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHSEDG 365 >gi|58038774|ref|YP_190738.1| hypothetical protein GOX0299 [Gluconobacter oxydans 621H] gi|58001188|gb|AAW60082.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 396 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 159/366 (43%), Gaps = 9/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + ++ +TL +L LV + D ++ + PN S +AA VP I Sbjct: 32 TLAIYIARQFMLSTLSMVLALTGLVSLFDFIDLLRRAATRPNVPASLIVKIAALHVPYYI 91 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++PF L+ IV F L R+SEL+++RA GIS WQ L + ++L G+ T I+ + Sbjct: 92 IYVLPFGILLGGIVCFSRLTRSSELIVARAAGISAWQFLASPLACALLTGLLTTTGISAL 151 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW------- 176 +++ + L Q + G + + + + IL + Sbjct: 152 SSTMFRSAEMLDQTYLRTGGGPLTLNGGALWLRQSDDGLVPHGVAILHAQDVHLIDGALK 211 Query: 177 -EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + +D ++++I R +A + + + L +P TL + + Sbjct: 212 VSGVSIFRLDDRDRLIVRVEAPQGALGDHQWILHGTSVLHPDHLPQQIGDMTLPSDLTVG 271 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + S + + +S +S R F L+ +P++ M L++A S Sbjct: 272 RVQESFASPDTLSVFALPGFISLLERSGFPSI-RHRLHFQSLLALPILAGTMALVSAGFS 330 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R ++ GI +GF L+TI + + FG+SG L PV AA P + L++ +L Sbjct: 331 MRPTRRGGVARMLGSGIAAGFALFTISKVAEQFGESGALPPVLAAWAPTGAGLCLAVALL 390 Query: 356 LQKEDG 361 L EDG Sbjct: 391 LHMEDG 396 >gi|254510403|ref|ZP_05122470.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium KLH11] gi|221534114|gb|EEE37102.1| permease, YjgP/YjgQ family [Rhodobacteraceae bacterium KLH11] Length = 382 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 11/367 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + ++++ L + L+ +IDL E + + + S + L P I Sbjct: 18 ILDRYFARRFVQSFLVIGGIFLTLMILIDLIEQVRRF-DSVDLSFGQLLQLTLLNTPAAI 76 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++P + ++ I +F L R+SELV++RAIG S + L V ++++G F V ++NPI Sbjct: 77 SEMLPLLMILATIALFVGLARSSELVVTRAIGRSGIRALLAPVFIALMIGGFAVALLNPI 136 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFT 180 A + + L +++ G S W++ ++ I A + + D T Sbjct: 137 AAATSEEFQRLADGYRNQGSSALSISGEGLWLRQASASGQSVIHATGTVNGDDFALHDVT 196 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT------LNIPIKM 234 T K + A A + N L++ + + + T L + Sbjct: 197 ITTFSSDGKPNQQIAARQADLENGYWTLRQAKVWTLEDDLNPETNATTHEVLNLPTTLTR 256 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 D Q S S Y++ + +S ++ F + E + PL LV+M LI A+ Sbjct: 257 DRILDTLGQQDSVSVYDLPQLISDLREAG-FATKQYEVWLQVQLARPLFLVSMVLIGAAF 315 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ R I V + GF +Y I + G++G L AA P I LS+ + Sbjct: 316 TMRHVRFGGTGIAVLTAVLLGFGIYFIRNFAQILGENGQLPIFVAAWAPPFAGILLSLGL 375 Query: 355 LLQKEDG 361 LL EDG Sbjct: 376 LLHAEDG 382 >gi|217978371|ref|YP_002362518.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] gi|217503747|gb|ACK51156.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] Length = 361 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 171/358 (47%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF +L L + +VFV+D E+ + +LP+ S A+LA R P Sbjct: 5 TLGRYFSARFLTLILAVFVTICGMVFVVDFVEMLRRTTDLPDASPRSVALLAMLRAPSAS 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q++PF L ++ F +L R EL+I+RA+G+S+W L P + +I++GI +V++ NP+ Sbjct: 65 EQLMPFCVLCGSMAAFLDLTRKLELLIARAVGVSVWGFLVPPIAIAIVIGIGSVMLFNPV 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ + + +Q +D W++ + D I A+ + + T Sbjct: 125 SAAMKQRADKIEVEIFGRLTQQNADADIWIRQKSVDGDAIIKARTMSRDGSRLTKPTVYI 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D +K +A+ A + + + ++ G I+ + L + + Sbjct: 185 YDDHDKFEAEVEAEHAQLSDGVWRFEQARILMPGEETIETSVYLLASNLTPAQVARGPIS 244 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S +F+++ ++++ + + QF L+ PL+ VAM LIAA+ SL F R Sbjct: 245 PQSVAFWDLDAARRQTDRAG-LDSTAYKLQFQSLLARPLLFVAMVLIAAAFSLRFFRFGG 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +V G+ +GF+LY ++ G +G++ AA P ++ L L LL +EDG Sbjct: 304 IEKMVGGGVAAGFVLYVATKLVGDLGGAGLVSAPVAAWSPAVIASMLGALALLNQEDG 361 >gi|163853055|ref|YP_001641098.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218531865|ref|YP_002422681.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|240140388|ref|YP_002964867.1| putative permease [Methylobacterium extorquens AM1] gi|254562992|ref|YP_003070087.1| permease [Methylobacterium extorquens DM4] gi|163664660|gb|ABY32027.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218524168|gb|ACK84753.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|240010364|gb|ACS41590.1| putative permease [Methylobacterium extorquens AM1] gi|254270270|emb|CAX26266.1| putative permease [Methylobacterium extorquens DM4] Length = 362 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 87/358 (24%), Positives = 159/358 (44%), Gaps = 1/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF +++T L L LV+ +D E+ + G+ S A LA R P + Sbjct: 6 TLGRYFAWRFVRTILGVFLTVFALVYTLDFVELLRRAGDAEGASPGLMAQLALYRTPAVA 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + ++PF L ++ L+R ELV++RA GIS WQ L P ++ +G + NP+ Sbjct: 66 ESVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGAFVALAIGALAIGAYNPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ ++ + K + W++ + I A+ + T Sbjct: 126 SAALKQRSSEIEAKIFAKSTKAGTGKDLWLRQRSIDGQAIIRAETAVEGTTTLAGVTVFQ 185 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D+ + +A A +++ +L+ V P + + ++ Sbjct: 186 FDEAGAFAAQLEAARATLHDGWWELRDVRVLTRDEPPESHEVYLVASTLDPSQIRQRFTP 245 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S F+++ + ++ ++ R Q+ L+ PL+ +AM L+AA+VSL F R Sbjct: 246 PESVPFWQLPETIARHERAG-LDATRYRLQYDVLLATPLLYLAMVLVAATVSLRFFRFGG 304 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +V G+ +GF+LY +M+ G SG++ P AA P ++ L L LL +EDG Sbjct: 305 VGKLVLGGVSAGFVLYVARQVMEGLGASGMVAPTVAAWFPAVVGSLLGTLTLLYQEDG 362 >gi|227821475|ref|YP_002825445.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] gi|227340474|gb|ACP24692.1| permease YjgP/YjgQ family protein [Sinorhizobium fredii NGR234] Length = 360 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 137/358 (38%), Positives = 208/358 (58%), Gaps = 2/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFFK Y+ TT +FL+G L+F+ID +E+ ++M LP+Y++S ++ R+P I+ Sbjct: 5 TLGRYFFKRYIVTTFWFLVGIFALIFIIDFSELASRMSALPHYTVSGALLMTTFRIPTIL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ +PF+ L + +LNR ELV++RA GIS+WQ L PFV+G+ L+G+ V+ +NP+ Sbjct: 65 QQTVPFVALFSAMAALISLNRRYELVVTRAAGISVWQFLRPFVLGAFLVGVLAVVALNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G K L +W + +S IPW++ D IGA+ + + T I Sbjct: 125 AAWGTKRAEALEAEW-GSSRSAQSSSIPWLRQIYDGTDTIIGARSVQNGGTELINVTVIH 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + I R+DA A + + L V E GR+P + L +K D Q+ + Sbjct: 184 FDPQGTITLRQDAKSAKLEDGYWLLNGVTESGNGRLPRRLETVQLRTNLKADFVQERLAK 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S F+++ K+ + F ETQ + L+ +PL+LVAMTLIAA VSL+FSR NQ Sbjct: 244 ADSIQFFDLPHKIEVARSFG-FSTDAMETQLHSLLSLPLLLVAMTLIAACVSLKFSRFNQ 302 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 R ++ GI SGF+LY + ++K+FG SGI+ P AA +PV++ ++L ILL +EDG Sbjct: 303 SRSVILGGILSGFVLYVVTVLVKAFGSSGIVPPFVAAWLPVVVAMALGSTILLHQEDG 360 >gi|149914657|ref|ZP_01903187.1| permease, YjgP/YjgQ family protein [Roseobacter sp. AzwK-3b] gi|149811450|gb|EDM71285.1| permease, YjgP/YjgQ family protein [Roseobacter sp. AzwK-3b] Length = 363 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 152/366 (41%), Gaps = 12/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + +L T L +IL+F+ID+ + P + S +A + P Sbjct: 2 TLHLYLARRFLLTFLAIFSVFVILLFLIDIVKEMQDF---PAFPFSEILEIALLKAPSAN 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P I ++ + +F ++R SELV+ RA G S + L +V + L+G+ +V ++NPI Sbjct: 59 YEILPLIVILATVALFLRMSRNSELVVVRASGRSAIRALVAPLVVAGLIGVVSVTMLNPI 118 Query: 124 ATSGEKIGIDLIQQW--KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K DL+ + + W++ + I A++ + + T Sbjct: 119 VAASAKRHNDLMNSYLGWSINIMAIAPEGLWLRQGSETGQTVIHAERASSDVSTLYNTTF 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPIKMD 235 I R A A + + + +L + + +S ++ + D Sbjct: 179 IAFGLDGTPQRRITAASATLGDGEWRLADAKLWDLSSGINPESTAQELDSYSVPSALTQD 238 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S +++ K + +S F R + PL L+A+ + AA+ + Sbjct: 239 RIIDSFGKPEYISIWDLPKFIGQLEESG-FSARRYAVWMQTELARPLFLIALVMAAAAFT 297 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + SR + + V I GF L+ I + G++G + + AA P + L++ IL Sbjct: 298 MRHSRLHNTGVSVLTAIMLGFGLHYIRNFAQILGENGQIPIMLAAWAPPVAAFLLALGIL 357 Query: 356 LQKEDG 361 L E+G Sbjct: 358 LHMEEG 363 >gi|154246776|ref|YP_001417734.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] gi|154160861|gb|ABS68077.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] Length = 364 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 4/361 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + + + L + L+ ++D E+ + + ++ A++ R P Sbjct: 5 ILGFYFARRFASAVVLIFLSCVTLIVLVDFLEMARRTADREQVTVGLLALVTLYRAPSFT 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q++PF L I F L+R ELV++RA+G+S+WQ + P V+ + L+G+F+ V NP+ Sbjct: 65 EQLMPFAVLFGAISTFVLLSRRLELVVARAVGLSVWQFITPPVLVAFLIGVFSTTVFNPV 124 Query: 124 ATSGEKIGIDLIQQWK---DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ + + +G + W++ + I A+ Sbjct: 125 SADFKERANQIEGEIFGSSSSGLLPQGKKEFWVRQQSVDGQSIIQAQATRQGGRALSGVV 184 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 DK ++++ R +A A + + L G ++ + + Q+ Sbjct: 185 VFEFDKADRLVERVEARSATLGDGAWILTDARVLVPGLDHQHYDTYLIATNLDPKQIQES 244 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + SF+++ + + +S F R Q L+ P +LVAM LIAA V L R Sbjct: 245 LIAPETVSFWQLPAAIRSAEQSG-FGAERYRLQLQSLLARPFLLVAMVLIAAVVGLRVFR 303 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G+ +GF+LY + + G +G + PVAAA P + I L +LILL +ED Sbjct: 304 FGGVGQTILGGVLAGFLLYVGTKLAEDLGDAGFVHPVAAAWFPAVAGILLGVLILLHRED 363 Query: 361 G 361 G Sbjct: 364 G 364 >gi|298291095|ref|YP_003693034.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] gi|296927606|gb|ADH88415.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] Length = 361 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 5/360 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF + +L L +G L+ +IDL E+ ++GE + +L R+P Sbjct: 5 TLGVYFGRRFLGAVLGIFVGCAGLIMLIDLLELSRRVGER-DVDFGTLMLLVVYRMPFFT 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q++PF L I F L+R ELV++RA GIS WQ + P + ++LLG+F+ V NP+ Sbjct: 64 EQLLPFAVLFGAIGTFLTLSRRLELVVARAAGISAWQFIAPACLLALLLGVFSTTVYNPV 123 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + L + + G + WM+ + I A Sbjct: 124 SADFKDRASRLEAEIFNRQTGLFAMTTGGFWMRQQSVDGQAIIQAAATSDGGRQLTGVNV 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +K+ R +A AI+ +L+ G + ++ L + + Q+ Sbjct: 184 FLFGADDKLTERIEAVRAILEPGAWRLEHARVLTPGIGLQEYDAYMLATNLTPNQVQETL 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + F+++ + + + F R Q+ L+ P++L+AM LIAASVSL R Sbjct: 244 QS-DTVPFWQLPAAIDAATRVG-FGAERYRLQYQSLLARPMLLLAMVLIAASVSLRVFRF 301 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + G+ +GF+LY + + G++GI+ PV AA P ++ + ILILL +EDG Sbjct: 302 GGIGQTILGGVAAGFLLYVSTKLAEDLGEAGIVHPVIAAWFPAVVGALMGILILLHREDG 361 >gi|83952307|ref|ZP_00961039.1| permease, YjgP/YjgQ family protein [Roseovarius nubinhibens ISM] gi|83837313|gb|EAP76610.1| permease, YjgP/YjgQ family protein [Roseovarius nubinhibens ISM] Length = 363 Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 145/366 (39%), Gaps = 12/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + +L T + +L+ +IDL + P+ + +P Sbjct: 2 ILHFYFARKFLWTLIGIATVFSVLLGLIDLVDELQDF---PDLPFFDVLEIVLLNLPHAN 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ + +F L R+SELV+ RA G S L V + L+G+ V + NP+ Sbjct: 59 YEILPLVMILATVALFVRLARSSELVVLRASGRSALAGLAGPVAVAALVGLVGVTMFNPV 118 Query: 124 ATSGEKIGIDLIQ--QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K DL+ + S W++ + I AK P+ T Sbjct: 119 VAASAKRYNDLVNGHSGLGDNVLAISSEGLWLRQGTEEGQTVIHAKSATPDLSTLFGATF 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK------NSTTLNIPIKMD 235 + + + R A+ A + + L V + + + T+ + D Sbjct: 179 TSFTPEGDPMRRLTAESAELGQGQWHLSDVKIWDLANTDNPEASARTQDRLTIRAALTRD 238 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +++ + + F R F + PL L+A+ L+ A+ + Sbjct: 239 RIIDSFGKPEYIPIWDLPAFIDQLETAG-FSARRYAVWFQMELAQPLFLIALVLVGAAFT 297 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ +R V + GF L+ I + G++G + + AA P + ++ L++ IL Sbjct: 298 MKHARLANTGTSVLAAVMLGFTLHYIRNFAQVLGENGQIPILLAAWAPPVASLLLALGIL 357 Query: 356 LQKEDG 361 L EDG Sbjct: 358 LHMEDG 363 >gi|254503227|ref|ZP_05115378.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] gi|222439298|gb|EEE45977.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] Length = 364 Score = 164 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 105/360 (29%), Positives = 178/360 (49%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF ++K L L A +L+F+ D+ E+ + + +++ R A ++ RVPL++ Sbjct: 6 TLSVYFSGRFIKAILGLFLFAAVLLFLFDVLELVRRGSDREGFTVMRVAYISLLRVPLLL 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q+IPF L I F L+R ELV++RA GIS+WQ P V+ + LGIF++ V NP Sbjct: 66 EQVIPFTVLFGAIAAFVTLSRALELVVTRAAGISVWQFSTPAVLVGLFLGIFSITVYNPA 125 Query: 124 ATSGEKIGIDLIQQWK--DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A ++ + D +S W++ + + A ++L T Sbjct: 126 AVYLQQKSEEAAAGLFGADQTFLLQSSGEVWVRQDGLDGESVLRASQLLDNGTRLLRVTV 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T D+ R +A+ A + N+ L + Y P + ++ + ++ Sbjct: 186 FTFDEDGTFRERIEAEQARLGNETWYLDNAIVYTTENDPQSYSVYQISTFLTATEVRESI 245 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S SF+ + + + + + + YR Q+ L+ PL+L+AM LIAA+VSL+ SR Sbjct: 246 GSPESISFWNLPRFIDLARNAGLP-AYRYNLQYQSLLARPLLLIAMILIAAAVSLKVSRF 304 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++ GI SGF+LY + + K FG +GI+ P+ AA P I + + + ILL +EDG Sbjct: 305 GGLGRMILGGILSGFVLYVLTELAKDFGGAGIVPPLVAAWAPGIFGVLMGLTILLHQEDG 364 >gi|162149096|ref|YP_001603557.1| hypothetical protein GDI_3326 [Gluconacetobacter diazotrophicus PAl 5] gi|209545161|ref|YP_002277390.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787673|emb|CAP57269.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532838|gb|ACI52775.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 369 Score = 164 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 158/365 (43%), Gaps = 8/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + + + +L LV + D ++ ++ P+ S + +A VP + Sbjct: 6 TLSFYIARQFTLAVMAMILSLTGLVSLFDFIDLLRRVATRPDVPTSLASEIALLHVPYFM 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+PF L+ IV F+ L R+SEL+++RA GIS WQ L + ++L+GI ++P+ Sbjct: 66 IEILPFGVLLGGIVCFWRLTRSSELIVARAAGISAWQFLTGPLSCALLIGILATGALSPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDII-PWMQI------SNPQQDIFIGAKKILPENHIW 176 ++ + L + +G W++ + + + + Sbjct: 126 SSIMYRQAETLDHVYLRSGGPLNLSDGALWLRQADSGLVPHGVAILHARSVHLQGGVLRI 185 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + +D + +I R +A + + + R+P+ + + + Sbjct: 186 GGISLFRLDDTDHLIVRIEAPEGYLGRKVWIFQDARTIRPDRLPVPAGRFVMPTDLTVPR 245 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q+ + S + + ++ +S F + R F L+ +P++ M L+AA S+ Sbjct: 246 VQESFASPDTLSVWALPGFIALLERSG-FSSIRHRLHFQTLLTLPILAGTMALVAAGFSM 304 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +R ++ G+ +GF L+TI + FG+SG + P+ AA P + L++ +LL Sbjct: 305 RPTRRGGVARMIGSGVAAGFALFTISKVAAQFGESGAMPPLLAAWAPTGAGLCLAVSLLL 364 Query: 357 QKEDG 361 EDG Sbjct: 365 HLEDG 369 >gi|163759135|ref|ZP_02166221.1| putative permease [Hoeflea phototrophica DFL-43] gi|162283539|gb|EDQ33824.1| putative permease [Hoeflea phototrophica DFL-43] Length = 345 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 105/346 (30%), Positives = 179/346 (51%), Gaps = 2/346 (0%) Query: 16 TTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVN 75 T L + L ++++ ++D NE ++ P Y+++ G +++A RVP I+Q IPF+ L+ + Sbjct: 2 TFLTYCLAILVIILLVDFNESGRRLSAAPEYTVTTGLLVSALRVPTILQAAIPFVVLIAS 61 Query: 76 IVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLI 135 I LNR ELV++RA GIS WQ L P V ++L+G V +N A S + +I Sbjct: 62 IATLLQLNRKYELVVARAAGISAWQFLAPLVAANLLIGFIAVAGLNTFAASAMQWAETII 121 Query: 136 QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKD 195 + ++ G Q SD PW++ Q D +GA+ T D+ I R + Sbjct: 122 VE-RNLGSAQSSDSAPWLRQRTEQGDTVLGARASAAGGTRLSGATFFLFDEDQNIKERLE 180 Query: 196 ADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKK 255 A+ A++ + + L V + S ++ +K + + + F+E+ K Sbjct: 181 AETAVLGDGEWVLTNVRRIRGSEPVEQVESASVPTSLKAEFVGESLTSPDTVPFFELRDK 240 Query: 256 MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSG 315 ++ + E QF+ L+ P +L AMTLIAA VSL+F R Q ++ GI +G Sbjct: 241 IAVAKSFG-LSATSYEMQFHRLVAQPALLAAMTLIAAIVSLKFVRFGQSLTVILGGILAG 299 Query: 316 FMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 F+LY + ++++F +G + P+ AA +PV++ +L +LL KEDG Sbjct: 300 FVLYVVSELIQAFANAGTIPPIVAAWLPVLVASALGTTVLLHKEDG 345 >gi|84500988|ref|ZP_00999223.1| permease, YjgP/YjgQ family protein [Oceanicola batsensis HTCC2597] gi|84391055|gb|EAQ03473.1| permease, YjgP/YjgQ family protein [Oceanicola batsensis HTCC2597] Length = 365 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 83/366 (22%), Positives = 154/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF +L+ + L +++ +ID+ E ++ P ++S+ L P I Sbjct: 2 TLHYYFAWRFLRIFIGLLAVFLLMSMLIDVAEHLRRLSSTP-ATLSQVLRLVLLNAPEGI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ + +F L RTSELV++RA G S + L V+ + +G+ V ++NPI Sbjct: 61 YTILPLIMILATVALFLGLARTSELVVTRAAGRSALRSLVSPVIVAFAIGVIGVAMVNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K L++ ++ G S W++ + I A + P+ D T Sbjct: 121 VAATSKRYAALLESYQSGGADVLSLSAEGLWLRQGGAEGQTVIRAARSNPQATELYDVTM 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIKMD 235 I R +A A + +L + + S + + Sbjct: 181 IAYAPDGGPEKRIEAARARLIAGAWELHDARIWPLARGTNPEARTERRESFEVPSSLTEA 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + ++ +++ + ++ F R F + PL LVAM LIAA+ + Sbjct: 241 RIRDTFGEPSAIPVWDMPTYIGLLTEAG-FSARRHAVWFQMELAKPLFLVAMVLIAAAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + R + I V I GF LY + ++ G++G + AA P + ++ L++ +L Sbjct: 300 MRHVRFGKTGIAVLSAIMLGFALYYVRNFVQILGENGQIPVALAAWAPPVASVLLALGLL 359 Query: 356 LQKEDG 361 L EDG Sbjct: 360 LHMEDG 365 >gi|126725341|ref|ZP_01741183.1| putative permease [Rhodobacterales bacterium HTCC2150] gi|126704545|gb|EBA03636.1| putative permease [Rhodobacterales bacterium HTCC2150] Length = 365 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 81/366 (22%), Positives = 153/366 (41%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL YF + ++ L L ++F+ID+ E + + A LA P + Sbjct: 2 ILHLYFARKFITNFLMILFVFFGIIFLIDMVEQLRRFSSNS-VGMKEAAQLALLNAPGNL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ + +F NL RTSELVI+RA G S L ++ + LG+F V V NPI Sbjct: 61 YRILPLLVILSTLALFLNLTRTSELVIARASGRSALGALLAPLLVTFTLGVFGVSVWNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + W++ N + I A + I + T Sbjct: 121 GAATANLYETISDRHLGRASNALSIGAEGLWLRQGNVEGQTVIHANETNQNGTILGNVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK------NSTTLNIPIKMD 235 + D +++I+R +A A + L + + + ++ L + Sbjct: 181 LAFDINSQVIYRIEAKTAKLETGGWVLNDTKRWDFKDTLNPELSASTTDTIRLQSNLTQK 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + F+E+ ++ + F + + + + +P L+AM LI A + Sbjct: 241 EIQESFGAPSDIPFWELPAFIASLENAG-FSSTQHRVWYATELALPAFLMAMVLIGAMFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + SR + I++ I GF L+ + + G SG + + AA P + I L++ + Sbjct: 300 MRHSRFGKTGIMLLGAIVMGFGLFFLKNFAQVLGNSGQIPVLLAAWTPPLAGILLALGFI 359 Query: 356 LQKEDG 361 L E+G Sbjct: 360 LHTEEG 365 >gi|62289648|ref|YP_221441.1| hypothetical protein BruAb1_0705 [Brucella abortus bv. 1 str. 9-941] gi|82699576|ref|YP_414150.1| YjgP/YjgQ permease [Brucella melitensis biovar Abortus 2308] gi|189023898|ref|YP_001934666.1| permease [Brucella abortus S19] gi|254688958|ref|ZP_05152212.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|254697092|ref|ZP_05158920.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729988|ref|ZP_05188566.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|256257206|ref|ZP_05462742.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|260545600|ref|ZP_05821341.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260754447|ref|ZP_05866795.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260757666|ref|ZP_05870014.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260761493|ref|ZP_05873836.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883476|ref|ZP_05895090.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297248056|ref|ZP_06931774.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] gi|62195780|gb|AAX74080.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615677|emb|CAJ10664.1| Predicted permease YjgP/YjgQ family [Brucella melitensis biovar Abortus 2308] gi|189019470|gb|ACD72192.1| Predicted permease YjgP/YjgQ family [Brucella abortus S19] gi|260097007|gb|EEW80882.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260667984|gb|EEX54924.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260671925|gb|EEX58746.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674555|gb|EEX61376.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260873004|gb|EEX80073.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297175225|gb|EFH34572.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] Length = 362 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 194/359 (54%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ TLYFLLG L ++D E N++ LP Y++ L+A RVP I+ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENANRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+ Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D++ I R DA A + + +L V+ + G+ P + ++ ++ + ++ Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 245 SPETIPFTQLCHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + P AA +PV++ + LL KEDG Sbjct: 304 QSGAMILGGVIAGFVLYVVSVLVKAFGDAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 362 >gi|209964865|ref|YP_002297780.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209958331|gb|ACI98967.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 364 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 84/360 (23%), Positives = 163/360 (45%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + ++ L L G + +V+++D E+ + P+ + + ++P I Sbjct: 6 TLSLYIGRQFVLWFLAILGGMLAIVYLLDTVELLRRAANKPDAAFQIVLTMGLLKLPEIG 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+I+PF+ L + F+ L RT ELV+ RA GIS+WQ + P + + L+G+ V V+NPI Sbjct: 66 QEIVPFVVLFGGMYTFWRLTRTQELVVVRASGISVWQFMAPVLTATFLIGMTLVGVLNPI 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ L ++ ++ W++ Q I A I+P Sbjct: 126 FSAMLGRYEQLENRYLRGMKSSLDVAESGIWLRQVGEPQAYLIHADAIVPGTLELRQVMV 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ R DA A + + +L+ + GR+ + L + Q+ Sbjct: 186 LLNESDGQVSGRFDAASATLRDGFWELRDAWFNRPGRVGEFLPAYRLPTELTEQKIQEAF 245 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+E+ ++ + + R ++ L+ P++L AM L+AA+ ++ R Sbjct: 246 ASPDTLSFWELPGFIATLEATG-LSSVRHRLHWHSLLAQPVLLCAMILLAAAFAMRQVRR 304 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++A GI + +L+ + I+ + G SG + + AA P +++ L LL EDG Sbjct: 305 GGALTLIALGIAAALLLFVMQDIVLALGMSGTIPVLLAAWAPAGVSVMLGAAALLHLEDG 364 >gi|118590093|ref|ZP_01547496.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] gi|118437065|gb|EAV43703.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] Length = 364 Score = 162 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 109/360 (30%), Positives = 184/360 (51%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF +LK L L A +L+++ D+ E+ + G+ +S+ R A+++A RVPL++ Sbjct: 6 TLSLYFSGRFLKAILGLFLFAAVLIYLFDVLELVRRGGDREGFSVLRVAMISALRVPLLL 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q+IPF L I F L+R ELV++RA GIS+WQ P ++ I+LGI ++ V NP Sbjct: 66 EQVIPFTVLFGAIAAFVTLSRALELVVARASGISVWQFSLPAILVGIILGILSITVYNPA 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A ++ ++ + +S W++ + + AK++L + T Sbjct: 126 AVWFQQKSDEVAAGLFGSEQSFLLQSSNDVWVRQDGLDGESVLLAKQLLEGGTLLRGVTI 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T DK R +AD A + + L+ + Y + P ++ + ++ Sbjct: 186 FTFDKDGTFRERIEADEARLGDQIWYLENAIVYTTEQDPQPYGQYQISTFLTATEVRESI 245 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S SF+ + + + + + + YR Q+ L+ PL+LVAM LIAA+VSL+ SR Sbjct: 246 GSPESISFWNLPRFIELARNAGLP-AYRYNLQYQTLLARPLLLVAMILIAAAVSLKVSRF 304 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++ GI SGF+LY + + K FG +GI+ P+ AA P I + + + ILL +EDG Sbjct: 305 GGLGSMILGGILSGFVLYVLTELAKDFGGAGIVPPLVAAWAPGIFGVLMGLTILLNQEDG 364 >gi|209548670|ref|YP_002280587.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534426|gb|ACI54361.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 362 Score = 162 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 139/362 (38%), Positives = 212/362 (58%), Gaps = 2/362 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ Y+ T +FL+G + F++D +E +M LP Y+I G ++ A R+P Sbjct: 2 MFGTLSRYFFRRYMVTMGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGILMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ +PFI L V + V LNR ELV++RA GIS+WQ + PF+ GS++LG+ T+ + Sbjct: 62 LILQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLILGLLTMTAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAHTVQENGTKLIDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGQVILRQDAATAKLEDGYWQLNNVVERKPGEIPMRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMT IAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTFIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A IP+I+ ++L ILL +E Sbjct: 301 RFNQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPMIVALALGATILLHQE 360 Query: 360 DG 361 DG Sbjct: 361 DG 362 >gi|115525295|ref|YP_782206.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519242|gb|ABJ07226.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 361 Score = 162 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 161/359 (44%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYF ++ + LG +L+ +D ++ + G A + RVP ++ Sbjct: 5 TLGRYFAGKFVTAAVGVFLGLFVLLVFVDYIDLLRRSGGRA-IPALLIAQTSMFRVPQLL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++++PF L+ + + L+R ELV++RA G+S WQ + P + ++LLG F +V NP+ Sbjct: 64 ERLMPFCILIGAMTCYLALSRRLELVVARAAGVSAWQFMAPALWSALLLGTFATMVFNPV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + ++ + D W+ N + I A + + T Sbjct: 124 SANLQERAKQNEASMFGDSSGSLQDASGFWINQVNSEGQAIINASHSQQQGVLLTGLTVF 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 R +A A + +LK V Y P+++++ L + + Sbjct: 184 RFATDFSFKDRLEAREATLEPGFWRLKSVRRYSLDAPPVEEDTLLLPTTLTQAQVRNSFS 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + SF+++ + S S Q++ L+ P +L AM ++AASVSL F R Sbjct: 244 TPETVSFWQLPSYIRSSESSGFATAG-YRLQYHKLLARPFLLAAMVMLAASVSLRFFRFG 302 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ +GF+LY + + + K+ ++ P+AAA +PV + + LL +EDG Sbjct: 303 GVQKMVLSGVGAGFLLYILSKVTEDLSKAELMHPLAAAWLPVFVGGLAGFMALLYQEDG 361 >gi|288572984|ref|ZP_06391341.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568725|gb|EFC90282.1| permease YjgP/YjgQ family protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 365 Score = 162 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 129/361 (35%), Gaps = 6/361 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P IL R+ K + L+ +L +++ DL M S+S L ++P Sbjct: 3 PRILDRFILKELGSSFLFGVLTFTVILVAGDLLFKIADMLIEKGVSLSTVLKLFVYKLPS 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L+ ++ F L+ SE+V +A GIS ++ P ++G+ L+ I + Sbjct: 63 VVVLTLPMSCLLSTLLSFGRLSSNSEIVALKASGISFQRIARPVLLGASLVAISAFFMNE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + +++ +++ + + + L + Sbjct: 123 TVVPIANRAAENILMYDVVKQKPTLLRERMFLKDESGGKLNRVIYVGRLRTRKGSMENVL 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDG 236 + ++ AD + L + + L + + Sbjct: 183 VQEFDDGRLSRITTADEGNWSDGVWTLSDGKAFSVDKEGKVGFLFGFKEQRLPLNLTPAQ 242 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S + S ++ + + ++ I IP + + LI A++ + Sbjct: 243 VARSSLKPDEMSLSQLREHIEIMKAQGANLIPLW-VSYHLHIAIPWASLVLALIGAALGV 301 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + F Y ++++ ++ G+SG + P+ AA + ++ + L+ L Sbjct: 302 RPQRRGGMGVGFGLSVLIVFAYYVVMSMGRALGESGHIPPLVAAWLANVVFLGFGGLLTL 361 Query: 357 Q 357 + Sbjct: 362 R 362 >gi|260433487|ref|ZP_05787458.1| permease, YjgP/YjgQ family [Silicibacter lacuscaerulensis ITI-1157] gi|260417315|gb|EEX10574.1| permease, YjgP/YjgQ family [Silicibacter lacuscaerulensis ITI-1157] Length = 366 Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 11/367 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + +L++ + + L+ +IDL E + G+ + S + L P I Sbjct: 2 ILDRYFARRFLQSFVVIGAIFLTLMILIDLIEQVRRFGD-ADLSFGQLLQLTLLNTPAAI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++P + ++ I +F L R+SELV++RAIG S + L V ++ +G V ++NPI Sbjct: 61 SEMLPLLMILSTIALFVGLARSSELVVTRAIGRSGIRALAAPVALALGIGALAVALLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFT 180 A + + L Q+++ G S W++ + I A + + D T Sbjct: 121 AAATSEKYETLSDQYRNGGSSTLSLSRDGLWLRQGSKDGQSVIHAAGTENGDTLKLIDVT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIKM 234 IT + + A A + + + L+ V ++ + ++ L + Sbjct: 181 IITFSPQGIPTRQIIAQSAELLDGQWLLRGVKDWSLSRAANPEFFSSEYDTLALPTTLTR 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + S Y++ + + ++ F + E + P LV+M LI A+ Sbjct: 241 ERILDRLGHQGLVSIYDLPQLIRDLAQAG-FSTKQYEVWLQAQLARPFFLVSMVLIGAAF 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ R I V + GF +Y + + G++G L + AA P I LS+ + Sbjct: 300 TMRHVRFGGTGIAVLTAVLLGFAIYFVRNFAQILGENGQLPVMLAAWAPPFAAILLSLGL 359 Query: 355 LLQKEDG 361 LL EDG Sbjct: 360 LLHAEDG 366 >gi|170746989|ref|YP_001753249.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653511|gb|ACB22566.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 363 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 91/364 (25%), Positives = 162/364 (44%), Gaps = 4/364 (1%) Query: 1 MPGI---LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAAT 57 M I L RYF +L+T L + LV+ +D E+ + GE S A L+ Sbjct: 1 MMLIGPTLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLY 60 Query: 58 RVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTV 117 R P + + ++PF L ++ L+R ELV++RA GIS WQ L P + ++ LG V Sbjct: 61 RTPAVAEGVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAV 120 Query: 118 LVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 V NP++ ++ ++ + K S W++ + + A+ + Sbjct: 121 GVYNPVSAMLKQRSTEIEAKIFAKSTKASSGKDLWIRQKGLDGEAILRAETAVEGTTTLA 180 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + T D K + A A++++ +L V P ++ + + Sbjct: 181 GVSVFTFDAAGKFAEQLVAARAMLHDGYWELSDVRVLTPDAPPESFDTYLIASNLDPGQV 240 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 ++ S F+++ ++ + ++ R Q+ L P++ VAM ++AA+VSL Sbjct: 241 RQRFTPPESVPFWQLPTTIARTERAG-LDATRYRLQYDVLWARPVLFVAMVIVAATVSLR 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 F R +V G+ +GF LY + +M+ G SG++ AA P ++ L L LL Sbjct: 300 FFRFGGVGKLVLGGVAAGFALYVVRQVMEGLGASGLVAAPVAAWFPAVVGSLLGTLTLLY 359 Query: 358 KEDG 361 +EDG Sbjct: 360 QEDG 363 >gi|17987546|ref|NP_540180.1| putative permeases [Brucella melitensis bv. 1 str. 16M] gi|225852206|ref|YP_002732439.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|254693440|ref|ZP_05155268.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|256044379|ref|ZP_05447283.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113222|ref|ZP_05454090.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|256264286|ref|ZP_05466818.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563731|ref|ZP_05834217.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|261213693|ref|ZP_05927974.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|265990797|ref|ZP_06103354.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994633|ref|ZP_06107190.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|17983249|gb|AAL52444.1| putative permeases [Brucella melitensis bv. 1 str. 16M] gi|225640571|gb|ACO00485.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|260153747|gb|EEW88839.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|260915300|gb|EEX82161.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|262765746|gb|EEZ11535.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|263001581|gb|EEZ14156.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094546|gb|EEZ18355.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|326408705|gb|ADZ65770.1| permease YjgP/YjgQ family protein [Brucella melitensis M28] gi|326538429|gb|ADZ86644.1| permease YjgP/YjgQ family protein [Brucella melitensis M5-90] Length = 362 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 194/359 (54%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ TLYFLLG L ++D E N++ LP Y++ L+A RVP I+ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENANRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+ Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D++ I R DA A + + +L V+ + G+ P + ++ ++ + ++ Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 245 SPETIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + P AA +PV++ + LL KEDG Sbjct: 304 QSGAMILGGVIAGFVLYVVSVLVKAFGDAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 362 >gi|288958014|ref|YP_003448355.1| hypothetical protein AZL_011730 [Azospirillum sp. B510] gi|288910322|dbj|BAI71811.1| hypothetical protein AZL_011730 [Azospirillum sp. B510] Length = 364 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 87/360 (24%), Positives = 166/360 (46%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + ++ ++ + +V ++D E+ + G P+ + +A ++P I Sbjct: 6 TLSRYIGRQFIFWFCLLMVILLAIVLLLDTVELLRRAGTKPHVTFGLVVEMALLKLPEIG 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQI PF+ L + F+ L R++ELV++RA+G+S WQ L P + + +G+ V ++NP+ Sbjct: 66 QQIFPFVILFAGMFTFWRLTRSAELVVARAVGVSAWQFLMPVMFAAAAIGVVKVTLVNPV 125 Query: 124 ATSGEKIGIDL--IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L + S W++ +N + FI A+ + P + Sbjct: 126 GAVFIAKYDQLQDRYLKLQSSSLNISRSGLWLRQTNETEQFFIHAELVNPATFELSNVVV 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + R DA A++ K +L+ + + + P +S T+ + M ++ Sbjct: 186 FLFDADQNYLARVDAPSAVLRERKWELQDAILNRAKKDPEKLDSYTIPTELDMATIEESF 245 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + SF+E+ + + + F R + L+ P + +AM L AA+ SL R Sbjct: 246 APPETISFWELPRFIHTLETTG-FPAVRHRLHYQSLLAQPFLFLAMVLFAAAFSLRLPRR 304 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +V G+ +GF+L+ + ++++FG S + + AA P +++ L I LL EDG Sbjct: 305 GGTMAMVTGGVLTGFVLFVMTDVVRTFGMSETIPIIMAAWSPAGISLLLGIAALLHLEDG 364 >gi|23501573|ref|NP_697700.1| hypothetical protein BR0686 [Brucella suis 1330] gi|161618655|ref|YP_001592542.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|163842956|ref|YP_001627360.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|254701469|ref|ZP_05163297.1| hypothetical protein Bsuib55_11506 [Brucella suis bv. 5 str. 513] gi|254704016|ref|ZP_05165844.1| hypothetical protein Bsuib36_08824 [Brucella suis bv. 3 str. 686] gi|254707610|ref|ZP_05169438.1| hypothetical protein BpinM_11731 [Brucella pinnipedialis M163/99/10] gi|254709807|ref|ZP_05171618.1| hypothetical protein BpinB_05956 [Brucella pinnipedialis B2/94] gi|256031298|ref|ZP_05444912.1| hypothetical protein BpinM2_11713 [Brucella pinnipedialis M292/94/1] gi|256060811|ref|ZP_05450971.1| hypothetical protein Bneo5_10662 [Brucella neotomae 5K33] gi|256159412|ref|ZP_05457190.1| hypothetical protein BcetM4_10688 [Brucella ceti M490/95/1] gi|256254706|ref|ZP_05460242.1| hypothetical protein BcetB_10505 [Brucella ceti B1/94] gi|256369121|ref|YP_003106629.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|260168437|ref|ZP_05755248.1| hypothetical protein BruF5_08723 [Brucella sp. F5/99] gi|260566735|ref|ZP_05837205.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|261221886|ref|ZP_05936167.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261315100|ref|ZP_05954297.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261317345|ref|ZP_05956542.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261324803|ref|ZP_05964000.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261752012|ref|ZP_05995721.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261754671|ref|ZP_05998380.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|261757899|ref|ZP_06001608.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|265988383|ref|ZP_06100940.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|265997849|ref|ZP_06110406.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|294852048|ref|ZP_06792721.1| hypothetical protein BAZG_00964 [Brucella sp. NVSL 07-0026] gi|306845287|ref|ZP_07477863.1| hypothetical protein BIBO1_1972 [Brucella sp. BO1] gi|23347486|gb|AAN29615.1| conserved hypothetical protein [Brucella suis 1330] gi|161335466|gb|ABX61771.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|163673679|gb|ABY37790.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|255999281|gb|ACU47680.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|260156253|gb|EEW91333.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|260920470|gb|EEX87123.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261296568|gb|EEY00065.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261300783|gb|EEY04280.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261304126|gb|EEY07623.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261737883|gb|EEY25879.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|261741765|gb|EEY29691.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261744424|gb|EEY32350.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|262552317|gb|EEZ08307.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|264660580|gb|EEZ30841.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|294820637|gb|EFG37636.1| hypothetical protein BAZG_00964 [Brucella sp. NVSL 07-0026] gi|306274446|gb|EFM56253.1| hypothetical protein BIBO1_1972 [Brucella sp. BO1] Length = 362 Score = 161 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 115/359 (32%), Positives = 194/359 (54%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ TLYFLLG L ++D E +++ LP Y++ L+A RVP I+ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+ Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D++ I R DA A + + +L V+ + G+ P + ++ ++ + ++ Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 245 SPETIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + P AA +PV++ + LL KEDG Sbjct: 304 QSGAMILGGVIAGFVLYVVSVLVKAFGDAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 362 >gi|148560142|ref|YP_001258668.1| hypothetical protein BOV_0678 [Brucella ovis ATCC 25840] gi|148371399|gb|ABQ61378.1| conserved hypothetical protein [Brucella ovis ATCC 25840] Length = 362 Score = 161 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 114/359 (31%), Positives = 194/359 (54%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ TLYFLLG L ++D E +++ LP Y++ L+A RVP I+ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+ Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D++ I R DA A + + +L V+ + G+ P + ++ ++ + ++ Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+A+TLIAA+VSL+F R Sbjct: 245 SPETIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAITLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + P AA +PV++ + LL KEDG Sbjct: 304 QSGAMILGGVIAGFVLYVVSVLVKAFGDAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 362 >gi|239831520|ref|ZP_04679849.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] gi|239823787|gb|EEQ95355.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] Length = 362 Score = 161 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 119/359 (33%), Positives = 189/359 (52%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ T YFLLG L ++D E +++ LP+YS+ L+A RVP I+ Sbjct: 5 TLGRYFFIRYVQITFYFLLGIFALSLLLDFTENASKLSNLPDYSVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G+ L G+ T+ ++NP Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGAFLFGLATIFILNPF 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAYGFAKADEIASTWKTGKTTDVSALRDPWLRQKTDEGETIIGAKSILDQGATLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D+K I R DA A + + +L V + G P S + ++ + ++ Sbjct: 185 QFDEKKNIRERFDARRAQLRDGHWELTDVTRFARGEEPQKMASFQIETQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 245 TPDTIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GFMLY + ++K+FG +G + P AA +PVI+ + LL KEDG Sbjct: 304 QSGAMILGGVIAGFMLYVVSVLVKAFGNAGFVPPFVAAWVPVIIATFFGVSFLLHKEDG 362 >gi|153009929|ref|YP_001371144.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] gi|151561817|gb|ABS15315.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] Length = 362 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 118/359 (32%), Positives = 189/359 (52%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ T YFLLG L ++D E +++ LP+YS+ L+A RVP I+ Sbjct: 5 TLGRYFFIRYVQITFYFLLGIFALSLLLDFTENASKLSNLPDYSVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G+ L G+ T+ ++NP Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGAFLFGLATIFILNPF 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAYGFAKADEIASTWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILDQGATLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D+K I R DA A + + +L V + G P S + ++ + ++ Sbjct: 185 QFDEKKNIKVRYDARTAQLKDGHWELTDVTRFARGEEPQKMASFQIETQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 245 TPDTIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GFMLY + ++K+FG +G + P AA +PV++ + LL KEDG Sbjct: 304 QSGAMILGGVIAGFMLYVVSVLVKAFGNAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 362 >gi|254713811|ref|ZP_05175622.1| hypothetical protein BcetM6_10740 [Brucella ceti M644/93/1] gi|254717131|ref|ZP_05178942.1| hypothetical protein BcetM_12059 [Brucella ceti M13/05/1] gi|261218946|ref|ZP_05933227.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261321555|ref|ZP_05960752.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] gi|260924035|gb|EEX90603.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261294245|gb|EEX97741.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] Length = 362 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 115/359 (32%), Positives = 193/359 (53%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ TLYFLLG L ++D E +++ LP Y++ L+A RVP I+ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+ Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D++ I R DA A + + +L V+ + G+ P + ++ ++ + ++ Sbjct: 185 QFDEQKNIKDRYDARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 245 SPETIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + P AA +PV++ LL KEDG Sbjct: 304 QSGAMILGGVIAGFVLYVVSVLVKAFGDAGFVPPFVAAWVPVVIATFFGASFLLHKEDG 362 >gi|114328862|ref|YP_746019.1| hypothetical protein GbCGDNIH1_2198 [Granulibacter bethesdensis CGDNIH1] gi|114317036|gb|ABI63096.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 370 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 162/366 (44%), Gaps = 9/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + +L L L+ +LV + D E+ + P+ S + +AA R+P + Sbjct: 6 TLSSYITRVFLAAALVVLVALTLLVGLFDFIELLRRAATKPDVSFGLVSTIAALRLPWMS 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+PF L+ I F+ L R+SELV++RA GIS WQ L V + LLG+ + VI+P+ Sbjct: 66 ITILPFAVLLGGIGAFWRLTRSSELVVARAAGISAWQFLALPVGAAALLGMLAMTVISPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT--- 180 ++ L + + + + I+ + Sbjct: 126 SSVMLSRAEQLDNTYLRTSGGPMRLAGGQLWLRQSDPGLDPHGVSIIHAMQVAAHKNSLQ 185 Query: 181 -----SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 +D +++++ R +A A + + + L + +P ++ + + + Sbjct: 186 ASSITVFRLDSEDRLVQRIEAATARLVSGQWVLDNARVLRPSHLPDPPHTVEIPTDLTVR 245 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + SF+ + + ++S F + R +F L+ +PL+ M L+AA S Sbjct: 246 RIQESFASPDTLSFWSLPDFIRLLDRSG-FSSLRHRLRFQSLLALPLLCATMALVAAGFS 304 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + SR ++ G+ +GF L+ + + + FG+SG + V AA P + + L++ +L Sbjct: 305 MRPSRRGGVAKMIGSGVAAGFCLFVVSKVAEEFGQSGTVPVVLAAWAPSVAGLMLAVALL 364 Query: 356 LQKEDG 361 L EDG Sbjct: 365 LHLEDG 370 >gi|254453977|ref|ZP_05067414.1| permease, YjgP/YjgQ family [Octadecabacter antarcticus 238] gi|198268383|gb|EDY92653.1| permease, YjgP/YjgQ family [Octadecabacter antarcticus 238] Length = 362 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 146/364 (40%), Gaps = 11/364 (3%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RYF + + T G +L+ +IDL E + G + S+ L+ +P I Sbjct: 2 HRYFARRFAWTFAATFGGFFVLMLLIDLVEQLRRYG--GDASLGDMFQLSLLNLPTGIYA 59 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 I+P I ++ + F L R+SEL+++RA G S L ++ ++++G + V+NP+ Sbjct: 60 ILPLIMVLATVTTFLGLARSSELIVTRAAGRSALNALIAPLIVTLIIGAIAIGVLNPLVA 119 Query: 126 SGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + K + +G S+ W++ + I A + + +D T IT Sbjct: 120 ATLKEYEARENALRSDGPSVLAISENGLWLRQGDDNSQTVIRAGRANLDGTQLQDVTFIT 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP------IDKNSTTLNIPIKMDGF 237 R +A A + +L + + + + + D Sbjct: 180 FPPTGGPTRRIEAASANLTQGAWELSEAKAWPLNSGRVAESVATTHTTLRIPSTLTADQI 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + +S +E+ + + F R + F + P L+AM LI A ++ Sbjct: 240 RDSFGVPSSIPIWELPAFIDRLEVAG-FSAARHQVWFQMELAQPAFLLAMVLIGAGFTMR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + ++V I F L+ + + G++G + AA P + I+ S+ +LL Sbjct: 299 HQRGGRTGVMVLTAILICFALFFLRNFAQILGENGQISAGLAAWAPPLAAIAASLGLLLH 358 Query: 358 KEDG 361 EDG Sbjct: 359 LEDG 362 >gi|302383688|ref|YP_003819511.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] gi|302194316|gb|ADL01888.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] Length = 381 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 6/363 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G + RY K+ L LV +ID EI +G + S R L + P + Sbjct: 21 GRIERYVLLQLGKSLAVALGVISALVMLIDFVEISRGLGSDTDLSGVRILGLMLIKSPAV 80 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I Q++PF+ L + F LNR SEL+ RA G+S W+ + P ++ G+ TV VI P Sbjct: 81 IVQLLPFVFLFGTLAAFVGLNRRSELIAMRAAGVSAWRFVLPAAGAALAAGVLTVTVIGP 140 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 +A SG+ + + W++ Q+ + + A + N D T Sbjct: 141 LAASGDGMFQRERGR-ISGAVGGGEQEAIWLREGEGQRQMVVRAARQDRANARLLDVTFF 199 Query: 183 TIDKKNK----IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + R DA A + + +L V Q G+ ++ L + D Sbjct: 200 IYATDPEGRRAFTERIDAASASLSAGRWRLVDAVGAQTGQRATRYSTLDLPSSLADDEAF 259 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S F+ + ++ + F + + L+ PL AMT++AA+ SL Sbjct: 260 ERFARPQSTPFWSLPGQIQRIEAAG-FSSTAYRLRLQQLLSTPLAFAAMTILAAAFSLRL 318 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + GF + + + G + ++ P AA +P +LT + +L Sbjct: 319 MRLGDLARMAVAAVVLGFAFFFLNQFSAAMGSAEVVPPFIAAWLPAVLTALAAFTLLFYT 378 Query: 359 EDG 361 EDG Sbjct: 379 EDG 381 >gi|119899192|ref|YP_934405.1| integral membrane protein [Azoarcus sp. BH72] gi|119671605|emb|CAL95518.1| probable integral membrane protein [Azoarcus sp. BH72] Length = 358 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 121/359 (33%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY K T L+ + L D + +G+ Y + + + A VP Sbjct: 1 MSKILSRYLAKEIFGATATVLVAFLGLFAFFDFINELDSVGK-DGYQLYQAVIYVAMIVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ L R SE+ + RA G+S W++L + + + T + Sbjct: 60 GRVYELLPIAVLIGSLYALTTLARHSEITVMRASGLSTWRMLRILGLIGSVFVVLTFVFG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA E ++ Q+ W++ ++ E+ F Sbjct: 120 EYIAPPAESAAQQWRLVATNSAVSQQLRSGLWVKDGAQVINVRTLRPDRSMEHVRIYAFN 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +++ + ++S + + Sbjct: 180 EHYGLESIS-EAATGVYDGEGQWRLNGIQRTRFTDERTVLEHEDSIIWRSELTPEVLSVL 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + + + N + R E + +V P ++ M +A + R Sbjct: 239 MVVPERMSVANLWAYVRHLRE-NRQNADRYEIALWKKLVYPFAVLVMLALALPFAFTHDR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + V G+ G + + + + G PV AAL P ++ ++ + ++L E Sbjct: 298 MGGVSVKVFLGVMLGIGFHLLNGLASNLGVINAWPPVLAALTPSLVFLATAAVMLYSVE 356 >gi|254718822|ref|ZP_05180633.1| hypothetical protein Bru83_04670 [Brucella sp. 83/13] gi|265983807|ref|ZP_06096542.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306838744|ref|ZP_07471578.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] gi|264662399|gb|EEZ32660.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306406146|gb|EFM62391.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] Length = 362 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 115/359 (32%), Positives = 193/359 (53%), Gaps = 2/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y++ TLYFLLG L ++D E +++ LP Y++ L+A RVP I+ Sbjct: 5 TLGRYFFTRYVQITLYFLLGIFALALLLDFTENASRLANLPAYTVWAALGLSAMRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPF+ L + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+ Sbjct: 65 QQMIPFVALFSAMATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A G ++ WK S PW++ + + IGAK IL + D T I Sbjct: 125 AAHGFSKAEEIAAMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFI 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 DK+ I R DA A + + +L V+ + G+ P + ++ ++ + ++ Sbjct: 185 QFDKQKNIKDRYDARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLA 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Sbjct: 245 SPETIPFTQLRHKIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+F +G + P AA +PV++ + LL KEDG Sbjct: 304 QSGAMILGGVIAGFVLYVVSVLVKAFSDAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 362 >gi|255263663|ref|ZP_05343005.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] gi|255105998|gb|EET48672.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] Length = 363 Score = 159 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 150/365 (41%), Gaps = 10/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + + L + ++ +D+ E + + S ++ L P + Sbjct: 2 ILHRYFARRFFLAFLGVFVIFFAILGFLDMVEQLGKFSG-DDVSFTQTVGLTLLNTPQAL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P + ++ I +F +L R+SE+V++RA G S + L+ + ++L+G+F V V+NPI Sbjct: 61 YRILPLVMILSTIALFLSLARSSEMVVTRAAGRSAIRALSAPIFVAVLIGLFAVAVLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ + + S W++ + Q I A+ E T Sbjct: 121 VAATSQEYEKRASDYRSDDAQVLSVSAEGLWLRQGDNTQQTVIRAEAATLEGTELSRVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM-----DG 236 I R +AD A + +L + + +ST ++ D Sbjct: 181 -LSFTDAGPITRIEADSARLTPGAWELTNAKSWPLDAPNPEASSTKHDVLRVPSTLTRDQ 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + ++ +E+ + + F R F + +P +V+M ++AA +++ Sbjct: 240 IRDGFGTPSAIPIWELPAFIKQLETAG-FSARRHAVWFNMELALPAFMVSMVMVAAGLTM 298 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + V I GF Y + + G++G + AA I L++ +LL Sbjct: 299 RHQRGGRVGLSVLAAIMLGFAFYFLRNFAQILGENGQISATLAAWATPAAAICLALGMLL 358 Query: 357 QKEDG 361 EDG Sbjct: 359 HLEDG 363 >gi|255764469|ref|YP_003064807.2| putative permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254547820|gb|ACT56867.2| putative permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 361 Score = 159 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 361/361 (100%), Positives = 361/361 (100%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP Sbjct: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI Sbjct: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT Sbjct: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF Sbjct: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR Sbjct: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED Sbjct: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 Query: 361 G 361 G Sbjct: 361 G 361 >gi|163792837|ref|ZP_02186813.1| Predicted permease [alpha proteobacterium BAL199] gi|159181483|gb|EDP65995.1| Predicted permease [alpha proteobacterium BAL199] Length = 365 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 4/361 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + ++ L M +VF++DL E+ + +AA ++P + Sbjct: 6 TLSTYIGRQFVFWVLGTFAAIMAIVFLLDLIELLRRGSGKDGAHFGVLVEMAALKLPNMG 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQI+PF L +++ F L RT+ELV++RA GIS+WQ L P + ++LLG V V+NPI Sbjct: 66 QQILPFAVLFGSMLAFTRLTRTNELVVARAAGISVWQFLMPAIAVALLLGALKVGVVNPI 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKS---DIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 ++ L N W++ + A + + Sbjct: 126 SSVMTARFNVLEDTILRNRVDSFMTVGQGGLWIRERTESGQHVVHALAARQNDAELANVL 185 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 I ++ + R DA A + +L V P + S + + + Q Sbjct: 186 VIRFGHNDEFLERIDARTARLGAGYWELHDTVVTSVKGRPDQRGSIRIPTRLTIQNIQDS 245 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + SF+E+ + + F + ++ L+ PL+L+AM LIAA+ SL +R Sbjct: 246 FASPETMSFWELPGFIRILENAG-FSAVKHRLYWHALLASPLLLIAMVLIAATFSLRLTR 304 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + G+F+GF+LY + I+ + G S + V AA P +T+ L + LL ED Sbjct: 305 RGGTLLWASSGLFTGFLLYFMSDIVFALGLSARIPEVLAAWTPATVTMLLGLTSLLHLED 364 Query: 361 G 361 G Sbjct: 365 G 365 >gi|154253776|ref|YP_001414600.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157726|gb|ABS64943.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 363 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 90/360 (25%), Positives = 160/360 (44%), Gaps = 4/360 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + +L L ++L+F+I+L E+ + + P+ + +A VP I Sbjct: 6 TLSRYLGRQFLGVVLLTFGVFIVLIFMIELVELLRRSADKPDVTFGLVVTIALMEVPRIG 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q +PF L + F L+R +ELV++RA G+S+WQ + P + + ++G F V NP+ Sbjct: 66 AQTLPFAVLFGGMAAFLRLSRNNELVVARAAGVSVWQFIAPALAVAFVIGAFVTTVFNPV 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQK--SDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + L ++ S W++ ++ + A ++ T Sbjct: 126 SATLTTRAEQLESKYLSRQASFVAVSANGLWLRQADSTGQSVVHALRMDDGF-RLRRVTI 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D+ N+ R DA A + +L V G ++ + ++ Sbjct: 185 FLYDQGNRFSGRIDAATARLRPGYWELADVWVMMDGEQSRKYDTYRQETSLTQKQIEESF 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S SF+E+ ++ + + F R + F+ L+ P +L M LIAA+ SL +R Sbjct: 245 AREESISFWELPHFIATAEAAG-FSARRYQIYFHQLLATPALLCTMVLIAAAFSLRVTRM 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +V GIFSGF++Y + + + G SGIL AA P ++ L + +L EDG Sbjct: 304 GGLLQMVLGGIFSGFLIYFLGNLAIALGLSGILPAALAAWAPSLVATLLGLAVLFHLEDG 363 >gi|328544012|ref|YP_004304121.1| permease YjgP/YjgQ [polymorphum gilvum SL003B-26A1] gi|326413756|gb|ADZ70819.1| Permease YjgP/YjgQ [Polymorphum gilvum SL003B-26A1] Length = 363 Score = 156 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 101/360 (28%), Positives = 186/360 (51%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF + +LK L L A +L+F+ D+ E+ + GE ++S+ R +++ RVPL++ Sbjct: 5 TLTLYFSRRFLKAILGLFLLAAVLIFLFDVLELLRRAGERGDFSVLRITLISLLRVPLLL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q++PF L I F L+R ELV++RA GIS+WQ P V+ ++++G+ +V + NP+ Sbjct: 65 EQVLPFAVLFGAIWAFVTLSRALELVVARAAGISVWQFGAPAVLVALIIGLVSVTLYNPM 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A ++ ++ + ++ W++ + + A+++L T Sbjct: 125 AVWMQERSNEVAAGIFGTEETFLLQTTNAVWIRQDGLDGESVLNAEQLLDHGERLLGVTI 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T D+ R +A A + N LK V+ Y P + ++ + ++ Sbjct: 185 FTFDRAGSFQERIEAREARLRNQFWHLKDVIVYTTESDPQRYGTYEVSTYLTPTEVRESI 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S SF+ + + + ++++ + YR Q++ L+ PL+L+AM LIAA+VSL SR Sbjct: 245 GAPESISFWNLPRFIELASRAGLP-AYRYTLQYHSLLARPLLLLAMVLIAAAVSLRVSRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++ GI +GF+LY + + + FG +GI+ P+ AA P + + + ILL +EDG Sbjct: 304 GGLGGMILGGIIAGFVLYVLSELGRDFGGAGIVPPLVAAWAPGAFGVLMGLTILLNREDG 363 >gi|312897532|ref|ZP_07756952.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310621384|gb|EFQ04924.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 364 Score = 156 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 132/364 (36%), Gaps = 9/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K ++ L+ + + + S+ + +P Sbjct: 1 MRILDKYILKEFIGPFLFGVCAFTSVFVGTGTLYRIANLINQYGASMWAAFRILVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P L+ +++ F ++ SE+++ R+ G + +L P + ++ + + T Sbjct: 61 IIVITFPMSVLLGSLMAFGRMSAASEIIVMRSGGQNFPRLAMPIFITALCISLGTTAFNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + G + + ++ + + + Sbjct: 121 FVVPKANNAYNRIINEEVKAGAQPTTQDHIILKNVKGSDISSLMYARQYDGQEKRLKDLT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-------RIPIDKNSTTLNIPIKM 234 + + + + AD A DK + K + Y + N TL I K Sbjct: 181 VQEFDNDVLTRVEKADYAEWDGDKWIMHKGIIYDLSGGDEQQVTRTMTFNHQTLPISQKP 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + ++ + E+ +++ + +N + + + + +PL + L+ A + Sbjct: 241 NKMAESQKKPDELTIRELKEQIKVLD-NNSVDTNKMKVELFNRFSMPLASLVCALVGAPL 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ R I + F+ Y+I+TI + G G + P AA +P ++T I + Sbjct: 300 GLQKQR-GSSSIGFGISVIVIFIYYSIMTISNALGNGGRIPPYVAAFLPDVITGIAGIWL 358 Query: 355 LLQK 358 + +K Sbjct: 359 IYKK 362 >gi|332160138|ref|YP_004296715.1| hypothetical protein YE105_C0514 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607296|emb|CBY28794.1| putative Permease [Yersinia enterocolitica subsp. palearctica Y11] gi|325664368|gb|ADZ41012.1| hypothetical protein YE105_C0514 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859698|emb|CBX70034.1| lipopolysaccharide export system permease protein lptG [Yersinia enterocolitica W22703] Length = 356 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 76/362 (20%), Positives = 141/362 (38%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L T L L + L +I + ++G+ +YS + + +P Sbjct: 1 MFGVLDRYIGRTILNTILMTLFMLVSLSGIIKFVDQLRKVGQ-GDYSAASAGMYTLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + + I + + Sbjct: 120 EWVAPQGEQMARNFRAQQMYGGSLLSTQSGLWAKDGSDFIYIQR-----VSGDKELTGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 DK+++++ + A A ++ +L +V E S T + + Sbjct: 175 IYHFDKQDRLLSVRYAATATFEDNLWRLSQVDESDLSNPNKVTGSQTLTGEWKTNLTPEK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + +S + R E + I P + M L+A S Sbjct: 235 LGVVAMNPDSLSISGLHDYSKYLRQSGQESS-RYELNMWGKIFAPFSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GIF GF+ Y + I + PV AL+P IL + +S+ +LL Sbjct: 294 GPLRSVPMGVRVVTGIFFGFVFYVLDQIFGPLSLVYNIPPVIGALLPSILFLLISVYLLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|123440875|ref|YP_001004866.1| hypothetical protein YE0502 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087836|emb|CAL10622.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 356 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 141/362 (38%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L T L L + L +I + ++G+ +YS + + +P Sbjct: 1 MFGVLDRYIGRTILNTILMTLFMLVSLSGIIKFVDQLRKVGQ-GDYSAASAGMYTLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + + I + + Sbjct: 120 EWVAPQGEQMARNFRAQQMYGGSLLSTQSGLWAKDGSDFIYIQR-----VSGDKELTGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 D++++++ + A A ++ +L +V E S T + + Sbjct: 175 IYHFDQQDRLLSVRYAATATFEDNLWRLSQVDESDLSNPNKVTGSQTLTGEWKTNLTPEK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + +S + R E + I P + M L+A S Sbjct: 235 LGVVAMNPDSLSISGLHDYSKYLRQSGQESS-RYELNMWGKIFAPFSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GIF GF+ Y + I + PV AL+P IL + +S+ +LL Sbjct: 294 GPLRSVPMGVRVVTGIFFGFVFYVLDQIFGPLSLVYSIPPVIGALLPSILFLLISVYLLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|260779400|ref|ZP_05888291.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604490|gb|EEX30790.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 356 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 122/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E ++G+ +Y + + +P Sbjct: 1 MFKILDLYIGRTIIATTSLVLATFVGLSAIIKYVEQLRKVGQ-GSYDLLQALFYVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGYSKLDIGLSVLKTAVPLMVLVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L +W Sbjct: 120 QWGAPQAQKMARDLRAFTTSGGAIMSVRTGVWARDANDFIFIGKVEDDKLYGLSMWRYND 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ V+L ++ + + D Sbjct: 180 DKQLESVVHAAEVDYLSDNTWVMKDVQLTEM-ADEVEITKTSLPEYRWTTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E + + P + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVTYLK-ASEQDASRYELALWRKVTQPFSIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + PV A++P I+ +++++ +L +K Sbjct: 298 SVTMGARILSGVVAGFTFYISSEFFGPLSLVYSIPPVFGAVMPSIVFLTVALALLRRK 355 >gi|332142604|ref|YP_004428342.1| lipopolysaccharide ABC transporter permease [Alteromonas macleodii str. 'Deep ecotype'] gi|327552626|gb|AEA99344.1| lipopolysaccharide ABC transporter permease [Alteromonas macleodii str. 'Deep ecotype'] Length = 353 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 135/360 (37%), Gaps = 10/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + L T L + L +I E ++GE +Y + + +P Sbjct: 1 MFKILDLYIARTLLSTITVTLSVLIGLSALIKFVEQLRKIGE-GDYDMLAAFIYVLLSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++Q P TL+ ++ L SELV+ +A G+S W ++N + ++++ + + V Sbjct: 60 RDLEQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIINSAMKSTLVMILAVMAVG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + E L + G SD + W + + I + +D + Sbjct: 120 EWVTPFSETKAKQLRTEAISGGSLFSSDKLVWAKDGDRFVSIGQ-----VISQDSLKDVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGF 237 + + A + D L V Q+ D + N + D Sbjct: 175 IFNFNSDLSLQSITYAKNSTYDGDGWWLSNVEVTQFTETQVSVDDTDRMRWNSTLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + S ++ +++ + +N R E + I P+ + M L+A S Sbjct: 235 GIVAVKPEALSITGLLDYVNYLD-NNDQDPSRYELALWRKIFQPISVGVMLLMALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +GF + + + L P AL+P +L +++ ++L + Sbjct: 294 PLRSVTMGARVIMGVLTGFGFFILNEVFGPVSLVYQLPPFLGALLPSLLFAAVAGVMLRR 353 >gi|84516314|ref|ZP_01003674.1| permease, YjgP/YjgQ family [Loktanella vestfoldensis SKA53] gi|84510010|gb|EAQ06467.1| permease, YjgP/YjgQ family [Loktanella vestfoldensis SKA53] Length = 364 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 83/365 (22%), Positives = 150/365 (41%), Gaps = 9/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + +L T L L +++ +DL E + + L +P I Sbjct: 2 ILHRYFARRFLMTFLGVLAVFFLIMLFLDLVEQSRRYAS-AEAGLRDLLTLTLLNIPRAI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P I ++ I +F L R+SELV++RA G S + + + +L+GI V V+NPI Sbjct: 61 YEILPLIMILAAIGLFLGLARSSELVVTRAAGRSALRAILAPLAVGLLIGIVAVAVLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK-QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + K + N W++ + I A + + D T + Sbjct: 121 VAATSKEYEARGGALRGNASALSIGSSGLWLRQGASDEQTVIRAAGANLDGTVLTDVTFL 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI------DKNSTTLNIPIKMDG 236 T R +A A++ + L+ + +G + + + + D Sbjct: 181 TFTPDVGPARRVNAASAVLTDGAWVLRNAKVWTFGGTLTPEAGAVTQATMRIASTLTPDQ 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + +S +++ + ++ F R + I P+ L+AM +I AS ++ Sbjct: 241 IRDSFGTPSSIPIWQLPAFIDRLREAG-FSAQRHLVWLHSEIAQPVFLMAMVMIGASFTI 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + V I F++Y I + G++G L AA P + ++LS+ ILL Sbjct: 300 RHQRGGRTGLAVMTAILLAFVIYFIRNFAQVLGENGQLPAALAAWAPPLAAMALSLGILL 359 Query: 357 QKEDG 361 EDG Sbjct: 360 HNEDG 364 >gi|312113657|ref|YP_004011253.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218786|gb|ADP70154.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 85/357 (23%), Positives = 161/357 (45%), Gaps = 4/357 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY K + T L ++L+F +D E+ G + S A++ R+P+ + Sbjct: 9 RYMAKRFAITILGVFFVTLLLIFFVDFVEVLRS-GARKDVSAGTLALITLLRIPIFAELT 67 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +PF L+ I F +L+RTSEL I RA G+S+WQ + P ++ +I G+F V V NP+A++ Sbjct: 68 LPFAILIGTIAAFLSLSRTSELTIMRAAGLSVWQFVQPALIVAIFFGVFAVTVYNPVASA 127 Query: 127 GEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + W++ + + AK T + Sbjct: 128 MKAKSEKIQAEIFQSEKSFATSRGTGSWLRQESVDGPTILHAKTSADRGLTLAGVTLLQF 187 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D N+ + A+ A + +L+ V+ G + ++ + Sbjct: 188 DPANRFYEQIQANKAELRQGYWRLEGVIVQSSGDAVRRYDEYFVSTYLGPAQIMNSLGSL 247 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + SF+++ ++F+ K+ + + E Q + P+++ AM LIAA+ SL+ R + Sbjct: 248 ETLSFWDLPGFIAFAGKAGLP-TRQYELQHQLFLARPILMAAMVLIAATCSLKAFRFGKI 306 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + +V G+ GF + + + G SG++ AA P ++ + LS +LL +EDG Sbjct: 307 QTMVLTGLTGGFGFFIFSELSRKVGASGLVPVTVAAWGPALVALLLSATVLLYQEDG 363 >gi|269103491|ref|ZP_06156188.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163389|gb|EEZ41885.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 356 Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 124/361 (34%), Gaps = 9/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E ++G+ Y + + VP Sbjct: 1 MFKILDWYIGRTIIGTTALTLSTLVGLSAIIKYVEQLRKVGQ-GTYDLWNALIFVLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + +L+ Sbjct: 60 RDIEMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPLMLMVMLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K DL W G+ W + FI ++ + + Sbjct: 120 QWGAPQAQKAARDLRTFWTSGGNMLSVQSGVW----AKDGNDFIYIARVHEQKELDGINI 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 K LK V + I I + + D Sbjct: 176 WEFNGKNKLTQSVFAEKAQYNAEKGWSLKYVTVTDFAPIEIKETKYPTLDWQTTLTPDKL 235 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S + + + +S R E F+ + P+ + M L+A S Sbjct: 236 AIVTVKPEELSLSGVYNYVQYLKES-KQDASRYELAFWRKALQPVSIAVMMLLALSFVFG 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF Y + + L PV AL P ++ ++++I +L + Sbjct: 295 PLRSVTMGARVLSGVIFGFAFYISNEVFGPMSQVYRLPPVIGALAPSMVFLAITIYLLKR 354 Query: 358 K 358 K Sbjct: 355 K 355 >gi|295689677|ref|YP_003593370.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295431580|gb|ADG10752.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 367 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 146/366 (39%), Gaps = 8/366 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K + + L +V +I +I +G + + + L + P Sbjct: 4 MGMLERYVLKRSMSALVGALAVLGAMVMLIAFVDIARNVGTRADVNFFQLLYLTVLQAPA 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I + PF+ L + F LNR SEL+ RA G+S W+ + P S ++G+ T+ ++N Sbjct: 64 TILVLAPFVFLFGTMWAFVELNRRSELIAMRAAGVSAWRFIMPAATASFVIGLLTITLLN 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE---- 177 P+ T+ + + NG + W++ + + I I A+ + Sbjct: 124 PLTTAMTARF-ETERDHMMNGYLNNAPRGTWLRQGDDKTQIVIRARGRDMIDGSVRLRGV 182 Query: 178 --DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 ++ R +A+ A + +L V E G I +S ++ + Sbjct: 183 SLFVYTLNKKGVMDFTRRIEANEARLEPGFWRLTGVREATPGAGAIRSDSLSIPSNLDDR 242 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + + + + + + + F + + + PL+ AM+++AA+ S Sbjct: 243 TASERFNTPQAVALWRLPATIKRAEDAG-FSAAPFKLRLQQDLATPLLFSAMSVLAAAFS 301 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L R + G+ GF + + + GK+ +L P AA P I+ I +L Sbjct: 302 LRLMRLGGLAALAGSGVALGFGFFFFNELCSTLGKADVLAPSIAAWTPPIVAILAGFTLL 361 Query: 356 LQKEDG 361 EDG Sbjct: 362 CYTEDG 367 >gi|159043738|ref|YP_001532532.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] gi|157911498|gb|ABV92931.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] Length = 365 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 80/366 (21%), Positives = 156/366 (42%), Gaps = 10/366 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF + ++ + L L L+++ D E + ++ + A LA ++P I Sbjct: 2 TLQWYFARRFVMSFLSMLGIFAGLIWMTDTVESLRSLSS-DDFGLQEAAALALLQLPATI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++IP I ++ I +F + RTSEL+++RA G S + L V+ + L+G + V+NPI Sbjct: 61 YEVIPLIMVLATITLFLKMARTSELIVTRAAGRSAIRSLIAPVIVAGLIGGIGISVLNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQK--SDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + + + S W++ + P+ I I A I D T Sbjct: 121 VAATSRIAEETRDEVRGRATSVLALSSEGLWLRQAAPEGQIVIHAAGASLGGTILYDVTF 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN------STTLNIPIKMD 235 + D I R A A + L V + + + + +D Sbjct: 181 LRFDADALPIERVAASRAELVPGAWDLTGVKVWDLTGRLNPEAGVRTSAWMQVPSDLTLD 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ +E+ + + + + P+ LVAM LI A+ + Sbjct: 241 QIRDSFGDPSAIPIWELPAFIDQLEAAGFAALS-HRVWLHTELASPVFLVAMVLIGAAFT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +R + ++V + + GF +Y + + + G++G + +AAA P + + LS+ +L Sbjct: 300 MRHTRFGRTGLMVLFAVLLGFSMYFLKSFAQVLGEAGKIPVLAAAWFPPLAGVFLSLALL 359 Query: 356 LQKEDG 361 L +EDG Sbjct: 360 LHQEDG 365 >gi|22124661|ref|NP_668084.1| hypothetical protein y0748 [Yersinia pestis KIM 10] gi|45440497|ref|NP_992036.1| hypothetical protein YP_0645 [Yersinia pestis biovar Microtus str. 91001] gi|51594885|ref|YP_069076.1| membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108808931|ref|YP_652847.1| hypothetical protein YPA_2940 [Yersinia pestis Antiqua] gi|108810814|ref|YP_646581.1| hypothetical protein YPN_0649 [Yersinia pestis Nepal516] gi|145600503|ref|YP_001164579.1| hypothetical protein YPDSF_3249 [Yersinia pestis Pestoides F] gi|153949000|ref|YP_001402495.1| permease [Yersinia pseudotuberculosis IP 31758] gi|153997519|ref|ZP_02022619.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162420587|ref|YP_001608340.1| hypothetical protein YpAngola_A4049 [Yersinia pestis Angola] gi|165925751|ref|ZP_02221583.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|166010149|ref|ZP_02231047.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166214265|ref|ZP_02240300.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167399516|ref|ZP_02305040.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167423672|ref|ZP_02315425.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025892|ref|YP_001722397.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186893895|ref|YP_001871007.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|218930455|ref|YP_002348330.1| hypothetical protein YPO3439 [Yersinia pestis CO92] gi|229839083|ref|ZP_04459242.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896571|ref|ZP_04511738.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|229899646|ref|ZP_04514787.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901017|ref|ZP_04516141.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|270489197|ref|ZP_06206271.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294505143|ref|YP_003569205.1| hypothetical protein YPZ3_3034 [Yersinia pestis Z176003] gi|21957470|gb|AAM84335.1|AE013676_8 hypothetical protein y0748 [Yersinia pestis KIM 10] gi|45435354|gb|AAS60913.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51588167|emb|CAH19773.1| putative membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108774462|gb|ABG16981.1| membrane protein [Yersinia pestis Nepal516] gi|108780844|gb|ABG14902.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349066|emb|CAL22028.1| putative membrane protein [Yersinia pestis CO92] gi|145212199|gb|ABP41606.1| membrane protein [Yersinia pestis Pestoides F] gi|149289156|gb|EDM39236.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152960495|gb|ABS47956.1| putative permease [Yersinia pseudotuberculosis IP 31758] gi|162353402|gb|ABX87350.1| putative permease [Yersinia pestis Angola] gi|165922363|gb|EDR39540.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165991056|gb|EDR43357.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166204497|gb|EDR48977.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167052020|gb|EDR63428.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057842|gb|EDR67588.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752426|gb|ACA69944.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186696921|gb|ACC87550.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|229682356|gb|EEO78448.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|229687138|gb|EEO79213.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695449|gb|EEO85496.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700349|gb|EEO88381.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|262363204|gb|ACY59925.1| hypothetical protein YPD4_3021 [Yersinia pestis D106004] gi|270337701|gb|EFA48478.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294355602|gb|ADE65943.1| hypothetical protein YPZ3_3034 [Yersinia pestis Z176003] Length = 358 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 9/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L T L LL + L +I + ++G+ +YS + + +P Sbjct: 1 MFGVLDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQ-GDYSAASAGMYTILSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIAVFFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE+ + Q G + W + D + + Sbjct: 120 EWVAPQGEQTARNFRTQQMYGGSLLSTQSGLWAKD---GSDFIYIQRVSGESELTGVNIY 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + + + N +L +V E S T + + Sbjct: 177 HFDKEDRLLSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTPEK 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + +S N R E + + P + M L+A S Sbjct: 237 LGVVAMDPDSLSISGLHDYSKYLQQSGQESN-RYELSMWSKVFAPFSVAVMMLMALSFIF 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GIF GF+ Y + + + P+ AL+P +L + +SI +LL Sbjct: 296 GPLRSVPMGVRVVTGIFFGFVFYVLDQVFGRLSLVYGIPPMLGALLPSMLFLLISICLLL 355 Query: 357 QK 358 ++ Sbjct: 356 KR 357 >gi|85713125|ref|ZP_01044158.1| Predicted permease [Idiomarina baltica OS145] gi|85693041|gb|EAQ31006.1| Predicted permease [Idiomarina baltica OS145] Length = 355 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 140/361 (38%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY LKT+L L+ L +I E +G +Y + A+ +P Sbjct: 1 MFSILDRYIGATVLKTSLMSLIVLTGLSGLIRFVEQLKSVG-RGSYEVIDAALFVFYSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L SEL++ +A G S + + ++++ I + + Sbjct: 60 RDVEVFFPMAALLGGLIGMGVLASNSELIVMQAAGRSKLNIAGAVMKTAVVMMIAVIAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E G + Q G + W + + +I + + Sbjct: 120 EWVAPPMEAKGRLIRAQEISGGSLISAQRGVWAKDGDDFINISE-----VEDTGRLNGVL 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D + ++ A A+ N+ +L +VVE + + + + +ST + D Sbjct: 175 IYDFDGQQQLETVTYAQTAVYSNESWRLSQVVETRLTQQKVIEKRLDSTVWQSSLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S S +I +++ SN R E + ++ P+ + M L+A S Sbjct: 235 GVVTIKPESLSISGLIDYLTYLK-SNEQSAQRYELALWRKVLSPVTVAVMLLVALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ +GF + I + + V AL+P ++ S++I ++ + Sbjct: 294 PLRETSMGARILLGVITGFAFHVSNEIFGPLAQVYQVPAVLGALLPSLVFASVAIFVMQR 353 Query: 358 K 358 K Sbjct: 354 K 354 >gi|332991779|gb|AEF01834.1| lipopolysaccharide ABC transporter permease [Alteromonas sp. SN2] Length = 353 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 131/360 (36%), Gaps = 10/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + L T L + L +I E ++GE +Y + + +P Sbjct: 1 MFKILDLYIARTLLGTVTVTLSVLIGLSALIKFVEQLRKVGE-GDYDMMVAFLYVVLSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++Q P TL+ ++ L SELV+ +A G+S W ++ + + ++ + + V Sbjct: 60 RDLEQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIIVSTMKSATIMILLVMAVG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + E ++ + G S+ + W + I + +D Sbjct: 120 EWVTPFSESKAKEIRTEAISGGSLFSSEQLVWAKDGEHFVSIGEVLSRDS-----LKDIN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGF 237 + + A + +L V ++ ++ S N + D Sbjct: 175 IFDFNDDLSLESITYAKSGNFDGSEWRLSDVDVTRFSETAVTLDNEKSMQWNSTLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + S ++ + + + R E + I+ P+ + M L+A S Sbjct: 235 GIVAVKPEALSISGLLDYVGYLANNGQ-DPSRYELALWRKILQPVSVGVMLLMALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +GF + + + + P AL+P +L +++ ++L + Sbjct: 294 PLRSVTMGARVIMGVLTGFGFFILNEVFGPLSLVYQIPPFLGALLPSLLFAAIAAIMLRK 353 >gi|254229297|ref|ZP_04922715.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262393203|ref|YP_003285057.1| hypothetical protein VEA_002430 [Vibrio sp. Ex25] gi|151938221|gb|EDN57061.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262336797|gb|ACY50592.1| putative membrane protein [Vibrio sp. Ex25] Length = 356 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E ++G Y ++ VP Sbjct: 1 MFKILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVG-RGVYDLTHALYFVLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L ++W Sbjct: 120 QWGAPEAQKMARDLRSFAISGGSIVSVRSGVWARDANDFIFIGKVEDDKLYALNMWRFDD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + K V++ + + D + + D Sbjct: 180 DKNLQKVIFAEEVDYQQDNNWLMRDVQITDMKN-ENVISKQDIEQMEWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVTYLK-ASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + PV AL P ++ ++++I +L +K Sbjct: 298 SVTMGARVLSGVVAGFTFYISSEFFGPLSLVYGISPVFGALAPSLVFLAIAIALLRRK 355 >gi|28899416|ref|NP_799021.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839669|ref|ZP_01992336.1| permease YjgP/YjgQ family protein [Vibrio parahaemolyticus AQ3810] gi|260363480|ref|ZP_05776316.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|260879349|ref|ZP_05891704.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260895692|ref|ZP_05904188.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|260900264|ref|ZP_05908659.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|28807652|dbj|BAC60905.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149746812|gb|EDM57800.1| permease YjgP/YjgQ family protein [Vibrio parahaemolyticus AQ3810] gi|308087431|gb|EFO37126.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093069|gb|EFO42764.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308107540|gb|EFO45080.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|308112550|gb|EFO50090.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|328471447|gb|EGF42342.1| lipopolysaccharide ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 356 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E ++G Y ++ VP Sbjct: 1 MFKILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVG-RGVYDLTHALYFVLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDVEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L ++W Sbjct: 120 QWGAPEAQKMARDLRSFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYALNMWRFDD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++K V++ + + + + + + + D Sbjct: 180 DKNLEKVIFAEEVDYQQDNNWLMRDVQITNMQD-ENVISKQEMDQMEWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVTYLK-ASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + P+ AL P + +++++ +L +K Sbjct: 298 SVTMGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPIFGALAPSLAFLAIAVALLRRK 355 >gi|239993539|ref|ZP_04714063.1| predicted permease [Alteromonas macleodii ATCC 27126] Length = 353 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 133/360 (36%), Gaps = 10/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + L T L + L +I E ++GE +Y + + + Sbjct: 1 MFKILDLYIARTLLGTITVTLSVLIGLSALIKFVEQLRKIGE-GDYDMLVAFIYVLLSLA 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++Q P TL+ ++ L SELV+ +A G+S W ++N + ++++ + + V Sbjct: 60 RDLEQFFPMATLLGGLIGMGVLASNSELVVMQAAGMSRWNIINSAMKSTLVMILLVMAVG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + E + + G SD + W + + I + +D + Sbjct: 120 EWVTPYSETKAKQIRTEAISGGSLFSSDKLVWAKDGDRFVSIGQ-----VLSQDSLKDVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGF 237 + + + A D L V ++ + N N + D Sbjct: 175 IFSFNPDLSLESITHAKNGAFDGDGWWLSDVEVTKFTETNVTVDENNRMRWNSTLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + S ++ +++ +N R + + + P+ + M L+A S Sbjct: 235 GIVAVKPEALSITGLLDYVNYLE-NNDQDPSRYQLALWRKVFQPISVGVMLLMALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +GF + + + L P AL+P +L +++ ++L + Sbjct: 294 PLRSVTMGARVIMGVLTGFGFFILNEVFGPVSLVYQLPPFLGALLPSLLFAAIAGVMLRR 353 >gi|262367136|gb|ACY63693.1| membrane protein [Yersinia pestis D182038] Length = 358 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 9/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L T L LL + L +I + ++G+ +YS + + +P Sbjct: 1 MFGVLDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQ-GDYSAASAGMYTILSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIAVFFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE+ + Q G + W + D + + Sbjct: 120 EWVAPQGEQTARNFRTQQMYGGSLLSTQSGLWAKD---GSDFIYIQRVSGESELTGVNIY 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + + + N +L +V E S T + + Sbjct: 177 HFDKEDRLLSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTPEK 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + +S N R E + + P + M L+A S Sbjct: 237 LGVVAMDPDSLSISGLHDYSKYLQQSGQESN-RYELSMWSKVFAPFSVAVMMLMALSFIF 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GIF GF+ Y + + + P+ AL+P +L + +SI +LL Sbjct: 296 GPLRSVPMGVRVVTGIFFGFVFYVLDHVFGRLSLVYGIPPMLGALLPSMLFLLISICLLL 355 Query: 357 QK 358 ++ Sbjct: 356 KR 357 >gi|262274978|ref|ZP_06052789.1| putative membrane protein [Grimontia hollisae CIP 101886] gi|262221541|gb|EEY72855.1| putative membrane protein [Grimontia hollisae CIP 101886] Length = 357 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 118/362 (32%), Gaps = 10/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E +GE ++++ +P Sbjct: 1 MFKILDLYIGRTIIATTSLCLATLVGLSAIIKFVEQLRSVGE-GSFTMMTAVQYVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDIEMFFPMAVLLGALIGLGTLASSSELVVMQAAGFSKLDIGLSVLKTAMPLMLVVLALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K +L K G+ W FI + + + Sbjct: 120 QWGAPDAQKAARELRAFAKSGGNVMSVRRGVW----AKDGSDFIYIARTDQQESLVGVNI 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG----RIPIDKNSTTLNIPIKMDG 236 D + + D L+ V + + + + Sbjct: 176 WKFDDTQTLKAQVFAEQARYLDKDSWMLENVTVTHFDGPVKINETTEKQLAWKTTLTPEK 235 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + + + ++ R E + ++ PL + M L+A S Sbjct: 236 LSIVTVKPEELSLSGVYSYVDYLK-ASEQDASRYELALWRKVLQPLSIGVMMLLALSFVF 294 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS V G+ GF Y + L P A+ P + I +++ +L Sbjct: 295 GPLRSVTMGARVLSGVIFGFAFYISNEVFGPMTLVYNLPPFVGAIAPSLAFIGVTLYLLN 354 Query: 357 QK 358 +K Sbjct: 355 RK 356 >gi|270265133|ref|ZP_06193396.1| hypothetical protein SOD_k01710 [Serratia odorifera 4Rx13] gi|270041067|gb|EFA14168.1| hypothetical protein SOD_k01710 [Serratia odorifera 4Rx13] Length = 356 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 133/362 (36%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ +YS + VP Sbjct: 1 MFGVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQ-GDYSALSAGMFTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A G+++ + Q G + W + N I + Sbjct: 120 EWVAPQGDQMARNYRAQQMYGGSLLSTKNGLWAKDGNDFIYIER-----VAGEKELSGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + + ++ + A A + KL +V + T + D Sbjct: 175 IYHFNDQRRLETVRYAATASFEDGVWKLSQVDTSDLTNEKQVTGTQTLTGEWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S R + + + PL + M L+A S Sbjct: 235 LGVVALDPTSLSISGLHNYVKYLKQSGQ-EANRYQLNMWSKVFSPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + PV AL+P +L + +S+ +LL Sbjct: 294 GPLRSVPMGVRVVTGISFGFLFYVLDQIFGPLSLVYNMPPVLGALLPSMLFLLISVYMLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|189425644|ref|YP_001952821.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421903|gb|ACD96301.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 359 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 146/356 (41%), Gaps = 6/356 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M GI+ RY +L+ L G + + ++D E + + S+S ++P Sbjct: 1 MFGIVGRYLAGTWLRLFLLCQGGFLAVYLILDFMEKLGRFSK-AGASLSAILQFFLFKIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ Q +PF L+ ++ L+R+SEL R+ G+SI +++ P ++ +L + ++ Sbjct: 60 EMLGQTMPFAVLMATLLALGMLSRSSELTALRSCGLSIPRIVLPILMLGLLGSLVLLVNS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + + + I ++ + AK P + T Sbjct: 120 EFVVPKSYQQMEHIEKVVIKK--QSVNTFFRLNNIWFRSNNLILQAKVFEPLTRTLKGVT 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM--DGFQ 238 + + + R DA+ A+ + +L +V + S L++P+ + D + Sbjct: 178 VWELSADMQPVRRMDAEQALYGSGGWELLQVRTRSFAGQGGVVASARLSVPLTLKVDDLR 237 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + SF ++ + + R T + + +P M ++ +L+ Sbjct: 238 ILDNNADNFSFRKLREYAVSLE-KGGYPAGRYRTMMHAKLALPFGAFVMVVLGIPFALKT 296 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R++ + V G+ GF + I ++S+G+SG+L P AA ++ + I + Sbjct: 297 GRTSGVAMGVGAGVAIGFAYFIINAAVQSYGRSGVLPPFVAAWGANLIFVLTGIWL 352 >gi|16125935|ref|NP_420499.1| hypothetical protein CC_1690 [Caulobacter crescentus CB15] gi|221234698|ref|YP_002517134.1| hypothetical protein CCNA_01761 [Caulobacter crescentus NA1000] gi|13423101|gb|AAK23667.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963870|gb|ACL95226.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 368 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 137/365 (37%), Gaps = 6/365 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K + + L +V +I +I +G + S R L + P Sbjct: 5 MGMLERYVLKRTMGALVGALAVLSAMVMLIAFVDIARNVGTRADASFLRLLYLTILQAPA 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I + PFI L + F LNR SEL+ RA GIS W+ + P S ++G+ T+ ++N Sbjct: 65 TILVLAPFIFLFGTMWAFVELNRRSELIAMRAAGISAWRFIMPAAASSFVIGLLTITLLN 124 Query: 122 PIATSGEKIGIDLIQQWKDNG-----DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW 176 P+ T+ + + + + + Sbjct: 125 PLTTAMTAKFETERDRTMNGYLKEAPKGTWLRQGDDKTQIVIRARARELVDGSVRLRGVS 184 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 ++ R +A+ A + +L V E G I +S ++ + Sbjct: 185 LFVYTLNAKGVMDFTRRIEANEARLEPGFWRLSGVREATPGAGAIRSDSLSIPSNLDDRT 244 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + + + + + + F + + + PL+ AM+++AA+ SL Sbjct: 245 ASERFNTPQAVALWRLPATIQRTADAG-FSAVPFKLRLQQDLATPLLFAAMSVLAAAFSL 303 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R ++ G+ GF + + + G++ +L P AA P + + + +L Sbjct: 304 RLMRLGGLAMLAGSGVALGFGFFFFNELCSTLGRADVLAPFVAAWTPPTVALLVGFTLLC 363 Query: 357 QKEDG 361 EDG Sbjct: 364 YTEDG 368 >gi|91228858|ref|ZP_01262763.1| putative permease [Vibrio alginolyticus 12G01] gi|269966357|ref|ZP_06180443.1| Predicted permease [Vibrio alginolyticus 40B] gi|91187596|gb|EAS73923.1| putative permease [Vibrio alginolyticus 12G01] gi|269829034|gb|EEZ83282.1| Predicted permease [Vibrio alginolyticus 40B] Length = 356 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E ++G Y ++ VP Sbjct: 1 MFKILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVG-RGVYDLTHALYFVLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L I + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMIVVMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L ++W Sbjct: 120 QWGAPEAQKMARDLRAFAISGGSIVSVRSGVWARDANDFIFIGKVEDDKLYALNMWRFDD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + K V++ + + D + + D Sbjct: 180 DKNLQKVIFAEEVDYQQDNNWLMRYVQITDMEN-ENVISKQDIEQMEWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVTYLK-ASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + PV AL P ++ ++++I +L +K Sbjct: 298 SVTMGARVLSGVVAGFTFYISSEFFGPLSLVYGISPVFGALAPSLVFLAIAIALLRRK 355 >gi|59711022|ref|YP_203798.1| inner membrane protein [Vibrio fischeri ES114] gi|59479123|gb|AAW84910.1| conserved inner membrane protein [Vibrio fischeri ES114] Length = 358 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 121/359 (33%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + T+ L+ + L +I E ++G Y + +P Sbjct: 1 MFKILDWYIGRTIIATSALCLVTLVGLSSIIKYVEQLRKVG-RGTYDLLDALYFVILSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + +I L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLSIGVSVLKTAIPLMLMVMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G+ W + ++ + K F Sbjct: 120 QWGAPQAQKMARDLRTFEVSGGNIAAVRAGVWAKDADDFIYLARVENKEKLYGVTVWQFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQK 239 A + I K +S + + D Sbjct: 180 DNQDLNNVIFARTATYQAAQDDWKMNDVSITQMKDKAVISEKKVDSLDWSTTLTPDKLAV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + +S + +++ S R E F+ + P+ + M L+A S Sbjct: 240 VTVKPEEQSLTGLYDYVNYLKDS-ELDASRYELAFWRKALQPISVAVMMLLALSFVFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G+ +GF Y + + P+ AL P ++ +++++ +L +K Sbjct: 299 RSVTMGARILSGVIAGFTFYISNEVFGPMTLVYNIHPIFGALGPSLVFLAVTVGLLNRK 357 >gi|261253952|ref|ZP_05946525.1| putative membrane protein [Vibrio orientalis CIP 102891] gi|260937343|gb|EEX93332.1| putative membrane protein [Vibrio orientalis CIP 102891] Length = 356 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 128/358 (35%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y K + TT L + L +I E ++G+ Y + + + +P Sbjct: 1 MFKILDLYIGKTIIATTSLVLATFVGLSAIIKYVEQLRKVGQ-GTYDLIQALLYVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L I L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMIMVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K DL G W + +N I + ++W Sbjct: 120 QWGAPQAQKAARDLRAISTSGGALLSVRTGVWARDANDFIFIGKVEDDTIYGMNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ++ V+L ++V+ + + + D Sbjct: 180 NKRLESVVHAKRVDYVSDNTWMMKDVQLTEMVD-EIEISKHSLPEYSWTTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +S+ ++ R E F+ + P + M L+A S R Sbjct: 239 TVKPEELSLGGLYDYVSYLK-ASEQDPARYELAFWRKVTQPFSIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + PV A++P I+ +++++++L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYNIPPVFGAVMPSIVFLTIALMLLRRK 355 >gi|145219259|ref|YP_001129968.1| permease YjgP/YjgQ family protein [Prosthecochloris vibrioformis DSM 265] gi|145205423|gb|ABP36466.1| permease YjgP/YjgQ family protein [Chlorobium phaeovibrioides DSM 265] Length = 360 Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 138/362 (38%), Gaps = 5/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY F+ ++KT ++ + + L +I++ E + + + +P Sbjct: 1 MKILDRYIFQQFVKTFVFTTITFVSLFILINMVENLGDFMDRK-LLFTDIVLYYLRAIPD 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P +L+ +I+V L +SEL R+ G+S+ QLL PF++G I++ ++ Sbjct: 60 TILITSPVSSLLASILVAGRLAGSSELPAIRSAGVSMRQLLYPFLLGGIIISTLNIINSF 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + + + I P + + E Sbjct: 120 WLAPIAAVHNHAFERDHLGKSRRNGAAEGSNLHIIEPGSRVVTIGRLNTSFTGAKEVSIE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 + ++ N + L+ + ++ + + +L + + + Sbjct: 180 EFSGTGLRGRIDAESMRYDTGNKEWTLQNAAQRRFTPGGEEYQARPALSLPLSLTLKSLA 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + F + + ++ + R + + I +P + + LI +S + Sbjct: 240 ELNLRPDEMQFIQHWQYLAEKKHAGFAGLERTMVKLHTKIAVPFASLIIILIGVPLSAKK 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + +F+GF+ + + +FG +G++ P+ AA +P +L +++ I Sbjct: 300 KR-GGLATEIGISLFAGFLFLGLQKTIATFGYNGVVNPMLAAWLPNLLFLAIGYGIYRYS 358 Query: 359 ED 360 D Sbjct: 359 PD 360 >gi|109899861|ref|YP_663116.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] gi|109702142|gb|ABG42062.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] Length = 353 Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 138/360 (38%), Gaps = 10/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + L TT L + L +I E +G +Y ++ AV +P Sbjct: 1 MIKILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVG-RGSYDMTVAAVYVFLSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++Q P TL+ ++ L SELV+ ++ G S W ++ + +IL+ +F +++ Sbjct: 60 RELEQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E ++ Q G SD + W + + I K D + Sbjct: 120 EWVAPVSETKAKEIRTQAISGGSLFSSDRLVWAKDGDNFVSIGEVVDKD-----TLRDVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGF 237 D + + A+ A + +L V ++ I + D Sbjct: 175 IYEFDNELYLRQITTAESATYQDKTWELSHVQSTEFSDNRIQVQDAADGAWASSLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + S +I +++ +N ++ R + ++ P+ + M L+A S Sbjct: 235 GVVTVKPEALSIRGLIDYVNYLE-NNSQNSERYRLALWRKVLQPISVGVMLLMALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +GF + + S + P A++P ++ +SI +L + Sbjct: 294 PLRSVTMGARVIMGVLTGFGFFVSNEVFGSLSTVYHIPPFIGAILPSVVFTGISIHLLRR 353 >gi|322834555|ref|YP_004214582.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] gi|321169756|gb|ADW75455.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] Length = 356 Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 135/362 (37%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + T + L + L +I + ++G+ YS + + VP Sbjct: 1 MFGVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GGYSAAGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + + I + Sbjct: 120 EWVAPQGEQMARNYRAQQMYGGSLLSTQNGVWAKDGHDFIYIER-----VAGEKELTGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 +++NK+ + A A N + KL +V E S T + D Sbjct: 175 IYHFNEENKLQSVRYASSATFDNGEWKLSQVDESDLTDQLQITGSQTLTGVWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + + + +S R + + I PL + M L+A S Sbjct: 235 LGVVALDPDALSISGLHNYVKYLKQSGQ-EAKRYQLNMWSKIFSPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + P+ AL+P L +S+ +LL Sbjct: 294 GPLRSVPMGVRVVTGICFGFLFYVLDQIFGPLSLVYSIPPILGALLPSGLFFVISMFLLL 353 Query: 357 QK 358 +K Sbjct: 354 KK 355 >gi|319408319|emb|CBI81972.1| conserved membrane hypothetical protein [Bartonella schoenbuchensis R1] Length = 363 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 120/360 (33%), Positives = 195/360 (54%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y+KTT YF+L IL +ID E ++ LP+Y+ +++A RVP I+ Sbjct: 5 TLGRYFFVRYIKTTCYFVLSIFILALLIDFTENSGRLASLPHYTAKGALLISALRVPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+ PFI L + + +LN+ ELV++R+IG+S WQ L P +G+ L G+F++L INP+ Sbjct: 65 QQLFPFIALFSAMTMLISLNKKFELVVARSIGVSAWQFLIPACLGAFLFGLFSILFINPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A G +I +W+ N + + IPW+ IGA+ I + D T Sbjct: 125 AAWGSSQAEKMIAEWRSNNVQTSINKNRIPWLTQHTNLGTTTIGARSITQQGLSLIDATF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + A A + ND L Y+ G +P + +K + ++ Sbjct: 185 VQYNDNATVKNWIHAKQATLTNDAWLLTNGTIYKTGYVPEKFTEFRIKTNLKPEFLTEYL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A+ FY++ +K+S + + + + LI +P +LVAMTLIAA+VSL+F+R Sbjct: 245 ADPATIPFYKLPRKISAARSFG-YSANKFDMYLQSLIALPALLVAMTLIAATVSLKFTRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q + ++ G+ +GFMLY I ++++FG +G + PV AA PV++ + + LL KEDG Sbjct: 304 GQSKALILGGVIAGFMLYVISVLVQAFGNAGYIPPVIAAWTPVVIALFFGVSFLLHKEDG 363 >gi|332307891|ref|YP_004435742.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175220|gb|AEE24474.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 353 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 140/360 (38%), Gaps = 10/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + L TT L + L +I E +G +Y ++ AV +P Sbjct: 1 MIKILDWYIARTLLSTTAMSLGVLVGLSALIKFIEQMKSVG-RGSYDMTVAAVYVFLSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++Q P TL+ ++ L SELV+ ++ G S W ++ + +IL+ +F +++ Sbjct: 60 RELEQFFPMATLIGGLIGMGILASNSELVVMQSAGQSRWNIIISAMKSAILMVLFVMVIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E ++ Q G SD + W + + I K + D + Sbjct: 120 EWVAPISETKAKEIRTQAISGGSLFSSDRLVWAKDGDNFVSIGEVVDK-----NNLRDVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGF 237 D + A+ A +D +L V ++ I + + D Sbjct: 175 IYEFDNDLYLRKITTAEAANYQSDSWELSHVQSTEFSDNRIHVEDAADGAWSSSLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + S +I +++ +N ++ R + ++ P+ + M L+A S Sbjct: 235 GVVTVKPEALSIRGLIDYVNYLE-NNSQNSERYRLALWRKVLQPISVGVMLLMALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +GF + + S + P A++P I+ +SI +L + Sbjct: 294 PLRSVTMGARVIMGVLTGFGFFVSNEVFGSLSTVYHIPPFIGAILPSIVFTGISIHLLRR 353 >gi|197335786|ref|YP_002155171.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] gi|197317276|gb|ACH66723.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] Length = 358 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 122/359 (33%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + T+ L+ + L +I E ++G Y + +P Sbjct: 1 MFKILDWYIGRTIIATSALCLVTLVGLSSIIKYVEQLRKVG-RGTYDLLDALYFVILSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + +I L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLSIGVSVLKTAIPLMLMVMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G+ W + ++ + K F Sbjct: 120 QWGAPQAQKMARDLRTFEVSGGNIAAVRAGVWAKDADDFIYLARVENKEKLYGVTVWQFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQK 239 A + + I K +S + + D Sbjct: 180 DNQELNNVIFARTATYQAAQDDWEMNDVSITQMKDKAVISEKKVDSLDWSTTLTPDKLAV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + +S + +++ S R E F+ + P+ + M L+A S Sbjct: 240 VTVKPEEQSLTGLYDYVNYLKDS-ELDASRYELAFWRKALQPISVAVMMLLALSFVFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G+ +GF Y + + P+ AL P ++ +++++ +L +K Sbjct: 299 RSVTMGARILSGVIAGFTFYISNEVFGPMTLVYNIHPIFGALGPSLVFLAVTVGLLNRK 357 >gi|323492970|ref|ZP_08098108.1| lipopolysaccharide ABC transporter permease [Vibrio brasiliensis LMG 20546] gi|323312801|gb|EGA65927.1| lipopolysaccharide ABC transporter permease [Vibrio brasiliensis LMG 20546] Length = 356 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 129/358 (36%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y K + TT L + L +I E ++GE Y + + + +P Sbjct: 1 MFKILDLYIGKTIIATTSLVLATFVGLSAIIKYVEQLRKVGE-GTYDLIQALLFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLNIGMSVLKTAVPLMVLVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I + ++W Sbjct: 120 QWGAPQAQKMARDLRAFATSGGAILSVRTGVWARDANDFIFIGKVEDDKIYAMNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ + V+L ++V+ + + + D Sbjct: 180 EKRLESVVHAATVEYVADNTWKMKDVQLTEMVD-EVEISKQSLPEYSWTTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + P + M L+A S R Sbjct: 239 TVKPEELSLGGLYDYVTYLK-ASEQDPSRYELAFWRKVTQPFSIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + PV A++P ++ +++++++L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYNIPPVFGAVMPSLVFLTIALMLLRRK 355 >gi|157368809|ref|YP_001476798.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] gi|157320573|gb|ABV39670.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] Length = 356 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 131/362 (36%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ Y+ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQ-GEYTALSAGMFTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A G+++ + Q G + W + + + Sbjct: 120 EWVAPQGDQMARNYRAQQMYGGSLLSTKNGLWAKDG-----TDFIYIERVAGEKELSGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + + ++ + A A + KL +V + T + D Sbjct: 175 IYHFNDQRRLETVRYAASASFEDGVWKLSQVDTSDLTNEKQVTGTQTLTGEWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S R + + + PL + M L+A S Sbjct: 235 LGVVALDPTSLSISGLHNYVKYLKQSGQ-EANRYQLNMWSKVFSPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + PV AL+P +L + +S+ +LL Sbjct: 294 GPLRSVPMGVRVVTGISFGFLFYVLDQIFGPLSLVYNMPPVLGALLPSMLFLLISVYMLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|49474100|ref|YP_032142.1| hypothetical protein BQ04620 [Bartonella quintana str. Toulouse] gi|49239604|emb|CAF25961.1| Hypothetical transmembrane protein [Bartonella quintana str. Toulouse] Length = 364 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 117/361 (32%), Positives = 186/361 (51%), Gaps = 4/361 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF YLK T YF +L F+ID E +++ LP+Y+ +++ R+P I+ Sbjct: 5 TLGRYFFVRYLKMTCYFFGSIFVLAFLIDFTENSSRLSYLPSYTAKDAFLISVLRIPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPFI L + + +LNR ELV++R+IG+S WQ L P G+ L G+F++L++NP+ Sbjct: 65 QQLIPFIALFSAMAMLISLNRKCELVVTRSIGVSAWQFLMPACFGAFLFGLFSILLVNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNG---DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A G + +W+ N + IIPW+ IGAK I + D T Sbjct: 125 AAWGFSQAEKMTTEWRSNNVLTSFHNTRIIPWLTQRTNSDRTTIGAKSITDQGLSLIDAT 184 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + + + A + N L Y+ G P + +K + + Sbjct: 185 FVQYNDNATVKNWINTRKATLTNGVWLLTNGTIYKIGHPPEKFTEFQIKTNLKPEFLTER 244 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 A+ FY++ KK+ + + + LI +P +L+AMTLIAA+VSL F+R Sbjct: 245 LANPATIPFYQLPKKIMIARSFG-YSANNFDMYLQSLIALPALLIAMTLIAATVSLNFTR 303 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 Q ++ G+ +GF LY I ++++FG +G + P+ AA PVI+ + L I LL KED Sbjct: 304 FGQSGTLIFGGVIAGFTLYVISVLVQAFGNAGYMPPIIAAWTPVIIALFLGISFLLHKED 363 Query: 361 G 361 G Sbjct: 364 G 364 >gi|165936803|ref|ZP_02225370.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|167420748|ref|ZP_02312501.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|165915452|gb|EDR34062.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|166961554|gb|EDR57575.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] Length = 358 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 9/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L T L LL + L +I + ++G+ +YS + + +P Sbjct: 1 MFGVLDRYIGRTILNTILMTLLMLVSLSGIIKFVDQLRKVGQ-GDYSAASAGMYTILSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIAVFFPMAALLGALLGLGTLASRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE+ + Q G + W + D + + Sbjct: 120 EWVAPQGEQTARNFRTQQMYGGSLLSTQSGLWAKD---GSDFIYIQRVSGESELTGVNIY 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + + + N +L +V E S T + + Sbjct: 177 HFDKEDRLLSVRYAATATYEKDNKTWRLSQVDESDLSNPTQVTGSQTLTGEWKTNLTSEK 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + +S N R E + + P + M L+A S Sbjct: 237 LGVVAMDPDSLSISGLHDYSKYLQQSGQESN-RYELSMWSKVFAPFSVAVMMLMALSFIF 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GIF GF+ Y + + + P+ AL+P +L + +SI +LL Sbjct: 296 GPLRSVPMGVRVVTGIFFGFVFYVLDQVFGRLSLVYGIPPMLGALLPSMLFLLISICLLL 355 Query: 357 QK 358 ++ Sbjct: 356 KR 357 >gi|78186277|ref|YP_374320.1| hypothetical protein Plut_0389 [Chlorobium luteolum DSM 273] gi|78166179|gb|ABB23277.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 360 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 132/362 (36%), Gaps = 5/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY F+ ++KT ++ L + L +I + E + + N A +P Sbjct: 1 MKILDRYIFRQFVKTFIFTSLAFVALFMLIHMVENLDDFMDK-NQGFEAIAQYYLFAIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P +L+ I+V L +SEL R+ G+S+ QLL PF++G +++ + Sbjct: 60 TILITSPVSSLLAAILVAGKLAVSSELPAIRSAGVSMGQLLYPFLLGGMIISTINLTNSF 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + + + + + + I P I + E Sbjct: 120 WIAPAATLRNNNFELTELGHQRRDEEGGNSNLHILEPGNRIITLGSLNPDMSSAREVSIE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 K D L+ E + + + + + + Sbjct: 180 QFSQKGIVSRSDADGMRYNPEKKAWVLENAAERMFEDGSERFWTEPMLPVQLHLSLQSLA 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + + + +S + R+ + + + +P + + +I +S + Sbjct: 240 ELNLRPDEMNIARHWQYLSEKKHAGFAGLERSSVKLHTKLSLPFASLIIIIIGVPLSAKK 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + +F+GF+ + + +FG +G++ P+ AA +P +L + + +I Sbjct: 300 KR-GGLAAEIGISLFAGFLFLGLQKTIATFGYNGVMPPMLAAWLPNLLFLGVGYVIYRYS 358 Query: 359 ED 360 D Sbjct: 359 PD 360 >gi|282856200|ref|ZP_06265483.1| putative membrane protein, YjgP/YjgQ family [Pyramidobacter piscolens W5455] gi|282585959|gb|EFB91244.1| putative membrane protein, YjgP/YjgQ family [Pyramidobacter piscolens W5455] Length = 368 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 134/365 (36%), Gaps = 8/365 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L R+ + + L+ ++ +++ L + S+ L +P Sbjct: 4 FRTLDRFIMRELMGPFLFGVMAFTLIMVAGGLLFKLADLIIEQGVSLGVAGRLFIYELPS 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L+ +++ F ++ SE+V +A GIS ++ P +V ++ + + ++ + Sbjct: 64 VVVLTLPMSCLLASLLGFSKMSANSEIVALKAAGISFSRIGRPVLVAALGVTMLSLALNE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE--DF 179 + G+ ++++ +++ S+P + I D Sbjct: 124 TVVPLGKIAAQNVMRYEVAREKPALLKEQVFLRSSDPSSEGLRRIVYINKLYARSGTMDD 183 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKK-----VVEYQYGRIPIDKNSTTLNIPIKM 234 + K ++ A + L V + + L I + Sbjct: 184 VVVQEFKGADLVRLTTARKGTWVDGVWYLDDGDVFEVKGRDTVELTLHFKRQALPIRLTP 243 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + + S E+IK + F+ + +P V + LI A++ Sbjct: 244 QQISRSTAKPDDMSCLELIKYIEILRAQGKSLEPLW-VAFHLRLAVPWACVILALIGAAL 302 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + R + I F+ Y ++++ +S G++G + PV A +P IL + ++L+ Sbjct: 303 GVRPMRKGGASVGFGQSILIVFVYYVVMSMGRSLGQAGHIPPVLGAWLPNILFFAGALLL 362 Query: 355 LLQKE 359 + + Sbjct: 363 ARRAD 367 >gi|258645769|ref|ZP_05733238.1| membrane protein, YjgP/YjgQ family [Dialister invisus DSM 15470] gi|260403140|gb|EEW96687.1| membrane protein, YjgP/YjgQ family [Dialister invisus DSM 15470] Length = 361 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 127/360 (35%), Gaps = 6/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L L+ + + D S + + +P Sbjct: 1 MRILDKYILKEFLGPFLFGVAAFTAIFLGADTLLKIADYVTKYGASSTAALKIFILALPR 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P L+ ++ L+ +SEL++ R G S +L+ P + + L+ + V Sbjct: 61 IIVYTFPMAVLLGALMATSRLSGSSELIVMRTSGQSFSRLVMPIFILTFLISLCAVAFNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + +I ++ + + + + + + Sbjct: 121 YVVPWTNRKYEQVINIEIKRNLNPGVTDHVILRDVQNGKIAHLLYARRYNPENKKLENIT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLNIPIKMDGF 237 I + +I ++A A+ + K ++ Y G + + + + Sbjct: 181 IQEFQNEAVIRVENAPNAVWKDGKWFMENGTIYDLGEDGISRTMRFKNQFIPYGQSPETI 240 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 QK + + + E+ + ++ + + +P L+ A + ++ Sbjct: 241 QKEHKDYDEMTIRELFT-ARKAYEAAHEDATAIVMEIHRRFSLPFASFVFGLVGAPLGVQ 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ I + F+ Y ++T +++ GK ++ VAA +P ++ + ++ ++ + Sbjct: 300 RERSSS-SIGFGLSVVIIFVYYAVMTFLEALGKGHVISAVAAVWLPNLIALICAVYLIKR 358 >gi|13476525|ref|NP_108095.1| hypothetical protein mll7865 [Mesorhizobium loti MAFF303099] gi|14027286|dbj|BAB54240.1| mll7865 [Mesorhizobium loti MAFF303099] Length = 360 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 114/359 (31%), Positives = 191/359 (53%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y+ T++F LG + LVF+ID E+ + LP ++ ++ R+P+I+ Sbjct: 4 TLGRYFFFRYVTITIWFFLGLLALVFLIDFTELSGRTTGLPGFTYGTAVAISGLRMPMIM 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q +PF+ L + +LNR ELVI+R+ G+S WQ L P +G++L G +V +INP+ Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGFVSVGLINPL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKS-DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A + + Q + S D PW++ D IGA+ IL + D Sbjct: 124 AAHAFSLSEQIETQLRSGKSNTVSADAAPWIRQKTSTGDTIIGARAILNQGLEMSDAVFF 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +D++ I+ RKDA A + + +L+ V ++ G I S + +K + Q+ Sbjct: 184 VLDQQGNIVERKDAAHAYLRDGYWELQDVKTFRNGTIQPS-ASDRVPTNLKPEFVQERLA 242 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + FY++ K+ + + N QF L+ +P +LVAMTLIAA+VS+ F+R Sbjct: 243 RPETIPFYDLPGKIEVARSFGLKANA-FAMQFDSLVALPFLLVAMTLIAATVSMRFARMG 301 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + AA +PV++ + + LL KEDG Sbjct: 302 QSATMILGGVVAGFLLYVVSVLVKAFGVAGFVPTAIAAWVPVVVAMFFGVTFLLYKEDG 360 >gi|56479503|ref|YP_161092.1| hypothetical protein ebA7171 [Aromatoleum aromaticum EbN1] gi|56315546|emb|CAI10191.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 359 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 113/359 (31%), Gaps = 2/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY + T LL + L D + +G+ Y + + +P Sbjct: 1 MNRVLTRYLAREIFGATAMVLLAFLGLFVFFDFINELDVVGK-DGYELHHALIFVVMLIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ + L R SE+ + R G+S +L ++ + T ++ Sbjct: 60 GRVYELLPVAVLIGTLYALTTLARHSEITVMRVSGMSTPAMLRALGGIGVIFVVLTFVIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E+ + + W++ ++ E DF Sbjct: 120 EYVAPPAEQAAQQWRLTATHSAVSNQLRSGLWVKDGLRVVNVRTVLPDRSMEKVRIYDFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D A +++ +D T + Sbjct: 180 AQHALLSISEAATGRYDAAQQGWLLEGVRQTRFLGDHTDVVDLTELTWRSDLTPQVLSVL 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + +S + N + R E + +V P + M +A S R Sbjct: 240 MVVPERMSVTTLFAYISHLRE-NRQNADRYEIALWKKLVYPFAALVMMALALPFSFTHDR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + V G+ G + + + S G P AAL P L ++ + +L+ E Sbjct: 299 MGGVSMKVFLGVMLGIGFHLLNGLFSSLGVINSWQPALAALTPSALFLAAAAGMLVWVE 357 >gi|153834586|ref|ZP_01987253.1| permease YjgP/YjgQ family protein [Vibrio harveyi HY01] gi|148869029|gb|EDL68074.1| permease YjgP/YjgQ family protein [Vibrio harveyi HY01] Length = 356 Score = 151 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L Y + + TT L + L +I E ++G Y + +P Sbjct: 1 MFKLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVG-RGAYDLMHALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L ++W Sbjct: 120 QWGAPEAQKMARDLRAFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYGLNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 +DK V++ + + D + + D Sbjct: 180 DKKLDKVIFAEEVDYQQDNNWLMRYVQVTDMEN-ENVITKRDVEQMEWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVTYLK-ASEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + PV AL P ++ +++++ +L +K Sbjct: 298 SVTMGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPVFGALAPSLVFLAIAVSLLRRK 355 >gi|163803713|ref|ZP_02197573.1| putative permease [Vibrio sp. AND4] gi|159172496|gb|EDP57361.1| putative permease [Vibrio sp. AND4] Length = 356 Score = 151 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 122/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L Y + + TT L + L +I E ++G Y + +P Sbjct: 1 MFKLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVG-RGTYDLMHALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L ++W Sbjct: 120 QWGAPEAQKMARDLRAFALSGGSIVSMRAGVWARDANDFIFIGKVEDDKLYNLNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 +DK V++ + + D + + D Sbjct: 180 DKKLDKVIFAEEVDYQQDNNWLMRYVQVTDMEN-ENAITKRDIEQMEWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +S+ + R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVSYLK-ATEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + PV AL P ++ ++++I +L +K Sbjct: 298 SVTMGARILSGVVAGFSFYISSEFFGPLSLVYGIPPVFGALAPSLVFLAIAIALLRRK 355 >gi|114797396|ref|YP_760970.1| YjgP/YjgQ permease [Hyphomonas neptunium ATCC 15444] gi|114737570|gb|ABI75695.1| putative permease, YjgP/YjgQ family [Hyphomonas neptunium ATCC 15444] Length = 373 Score = 151 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 151/368 (41%), Gaps = 12/368 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + L + L ++ + +ID+ E +G ++ L+ ++P+II+ Sbjct: 7 IQRYILRECLSGLVLVLGILLLAILMIDVVEQMRTIGGDVEITLLDALRLSLMKLPMIIE 66 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q +PF L ++ F LNR SEL I RA G+S W+ L P +V + LGIF+ L +NP+A Sbjct: 67 QTLPFALLAATMMAFTRLNRRSELSIIRASGLSAWRFLTPVIVLGVALGIFSSLALNPLA 126 Query: 125 TSGEKIGIDLIQQ--WKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED---- 178 + + Q ++ W++ + I A+++ D Sbjct: 127 ARLSQSFEAERARLLDVGREVVQVAETGVWLRQGDDSSQYVIHARRVEDGGRTLLDVKII 186 Query: 179 -----FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + + R DA+ A++ +L+ +VE + P + + + + Sbjct: 187 EEQRLYNGRQPTNDFAFVRRIDAEKAVLNEGFWQLENLVENLPNQAPERRATLAIPTSLD 246 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + F+E+ + + + + R + + L P++ AM LI A Sbjct: 247 AVRLLDEYASPNTVGFWELPRFIFETRAAG-LDTSRYTMRLFTLTATPVLFTAMALIGAL 305 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 L R ++A G+ + LY S G +G V AA P + + +S+ Sbjct: 306 ACLRLQRLGGTSRLLATGVLAAIGLYFFTQFSSSLGSTGAAPAVVAAWSPPLFVLFVSLA 365 Query: 354 ILLQKEDG 361 + +EDG Sbjct: 366 FIAYREDG 373 >gi|254436833|ref|ZP_05050327.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] gi|198252279|gb|EDY76593.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] Length = 364 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 152/366 (41%), Gaps = 11/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYF + + T G +L+ +IDL E + G S+ L+ ++P ++ Sbjct: 2 ILHRYFARRFAWTFTATFGGFFVLMLLIDLVEQLRRYG--GEASLGDMLQLSLLKLPSLL 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P I ++ + F L R+SEL++SRA G S + L ++ ++++G T+ V NP+ Sbjct: 60 YDILPLIMVLATVATFLGLARSSELIVSRAAGRSALRALVAPLIVTVIIGAITIGVFNPL 119 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K + + S+ W++ + I A + +D T Sbjct: 120 VAATSKEFEARKTTLRSDAPSVLAISENGLWLRQGDDNSQTVIRAGGANLDGTQLQDVTF 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM------D 235 I K R +A A + L + + ++ T++ +++ D Sbjct: 180 IRFSKTGHPTRRIEAATANLTIGAWDLTDAKVWPLVGNRVAESVATIHTTLRIPSTLTAD 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +S + +E+ + + F R + + P L+AM LI A + Sbjct: 240 EIRDSFGVPSSIAIWELPAFIDRLEVAG-FSATRHQVWLQMELAQPAFLLAMVLIGAGFT 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + R + ++V I F L+ + + G++G + AA P + I+ S+ +L Sbjct: 299 MRHQRGGRTGVMVLAAILICFALFFLRNFAQILGENGQISAGLAAWAPPLAAIAGSLGLL 358 Query: 356 LQKEDG 361 L EDG Sbjct: 359 LHLEDG 364 >gi|156975867|ref|YP_001446774.1| hypothetical protein VIBHAR_03633 [Vibrio harveyi ATCC BAA-1116] gi|156527461|gb|ABU72547.1| hypothetical protein VIBHAR_03633 [Vibrio harveyi ATCC BAA-1116] Length = 356 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 122/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L Y + + TT L + L +I E ++G Y + +P Sbjct: 1 MFKLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVG-RGAYDLMHALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L ++W Sbjct: 120 QWGAPEAQKMARDLRAFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYGLNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 +DK V++ + + D + + D Sbjct: 180 DKKLDKVIFAEEVDYQQDNNWLMRYVQVTDMEN-ENVITKRDVEQMEWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +S+ + R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVSYLK-ATEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + PV AL P ++ ++++I +L +K Sbjct: 298 SVTMGSRVLSGVVAGFTFYISSEFFGPLTLVYGIPPVFGALAPSLVFLAIAISLLRRK 355 >gi|258622809|ref|ZP_05717827.1| Predicted permease [Vibrio mimicus VM573] gi|258584997|gb|EEW09728.1| Predicted permease [Vibrio mimicus VM573] Length = 356 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +L ++V + + D Sbjct: 180 HKKLSTVIFAEQVDYVGNNEWLMKDAQLTRMVN-EIEISKDTLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E F+ + P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLSDYVHYLK-ASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ A+ P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLAIALGLLGRK 355 >gi|262166530|ref|ZP_06034267.1| putative membrane protein [Vibrio mimicus VM223] gi|262026246|gb|EEY44914.1| putative membrane protein [Vibrio mimicus VM223] Length = 356 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L + L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMVVVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +L ++V + + D Sbjct: 180 HKKLSTVIFAEQVDYVGNNEWLMKDAQLTRMVN-EIEISKDTLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E F+ + P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLSDYVHYLK-ASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ A+ P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|269963273|ref|ZP_06177605.1| Predicted permease [Vibrio harveyi 1DA3] gi|269831988|gb|EEZ86115.1| Predicted permease [Vibrio harveyi 1DA3] Length = 356 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L Y + + TT L + L +I E ++G Y + +P Sbjct: 1 MFKLLDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVG-RGAYDLMHALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I L ++W Sbjct: 120 QWGAPEAQKMARDLRAFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYGLNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 +DK V++ + + D + + D Sbjct: 180 DKNLDKVIFAEEVDYQQDNNWLMRYVQITDMEN-ENVITKRDLEQMEWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVTYLK-ASEQDASRYELAFWRKLSQPLSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + PV AL P ++ +++++ +L +K Sbjct: 298 SVTMGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPVFGALAPSLVFLAIAVSLLRRK 355 >gi|90580730|ref|ZP_01236533.1| putative permease [Vibrio angustum S14] gi|90437998|gb|EAS63186.1| putative permease [Vibrio angustum S14] Length = 357 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 118/358 (32%), Gaps = 2/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + T L + L +I E ++G+ +Y + + +P Sbjct: 1 MFKILDWYIGRTIIATFSLTLSTLVGLSAIIKYVEQLRKVGQ-GSYDLLKALYFVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L +SELV+ +A G S + + ++ + I VL+ Sbjct: 60 QDIIMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPMMIVVVLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ + W G + W + N + + F Sbjct: 120 QWGAPQAQKMAREYRSAWVYGGSVIAAQNGVWAKNDNSFIYMGRVHDLNKVDVVNIWQFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + R D A + + + + D Sbjct: 180 NKGQLDDVTSAKRASYDKAKGWTMHDVTITDMTGSNQLTNSHIANKHWETTLTPDKLAVV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + P+ + M L+A S R Sbjct: 240 TVKPEELSLSGLYHYVNYLKET-KQDASRYELAFWRKALQPVSIAVMMLLALSFVFGPLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ GF Y + L P+ AL P + + ++I +L +K Sbjct: 299 SVTMGARVLSGVIFGFAFYISDQVFGPMILVYRLPPILGALGPSLAFLFITIYLLRRK 356 >gi|258591110|emb|CBE67405.1| putative Permease YjgP/YjgQ [NC10 bacterium 'Dutch sediment'] Length = 362 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 124/361 (34%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K +L+ + L+ + L ++DL + ++ ++ R+P Sbjct: 6 MRILDRYLAKEFLRICAFSLVIFLALSVIVDLFDRLSRFLDVSGV---VVIQYYIYRLPW 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q++P L+ + + R +EL+ + +SI++++ P +V +++ +++ Sbjct: 63 FGFQVMPVAVLLAALFSLGKMARHNELLAMKMGHLSIFRIVVPPLVLGLVVSFAALILGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + +D + + + + + T Sbjct: 123 SIVPRMNERALDAYRVKVQKVSPFQRTKNNDIWYRAKGNRFL-HISLLEAASGSIRGLTV 181 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKV----VEYQYGRIPIDKNSTTLNIPIKMDGF 237 + ++ R DA A + + +L+ + TL + K + Sbjct: 182 FELSPDFRLARRIDAKEARWQDGQWRLQNGEISRTKPDGTFRVDPFTHLTLYLEEKPEDL 241 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + E+ + + K+ + + R + + M I + +L Sbjct: 242 AHVVREAEEMTSSELREYIERLAKAGV-SSVRYQVDLAAKGSTAFTNLVMAFIGIAFALR 300 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + + + S G+ +L P+ AA +P +L + + +L+ Sbjct: 301 TGKRGVMAWT-GACVVAAVCYSILNSFSISLGRGDVLPPLVAAWLPNVLFTTAGLASVLR 359 Query: 358 K 358 Sbjct: 360 I 360 >gi|294637822|ref|ZP_06716094.1| membrane protein, YjgP/YjgQ family [Edwardsiella tarda ATCC 23685] gi|291089021|gb|EFE21582.1| membrane protein, YjgP/YjgQ family [Edwardsiella tarda ATCC 23685] Length = 356 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 142/362 (39%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + T + L + L +I + ++G+ +YS++ + +P Sbjct: 1 MFGVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GDYSVAGAGLFTLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A G++ + Q G + W + N I + + + Sbjct: 120 EWVAPQGDQAARNYRAQQMYGGSLLSTQGGLWAKDGNQFIYISQ-----VVNDRTLAGVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 T++ + K+ + A A + KL +V E S T + D Sbjct: 175 IYTLNDQRKLTSLRYATAATFDGKQWKLTQVEESNLTNPEQITGSRTLTGVWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S N R + + I PL + M L+A S Sbjct: 235 LGVVAVSPDSLSISGLYHYVKYLQQSGQESN-RYQLNLWSKIFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + PV A++P L +++SI +LL Sbjct: 294 GPLRSVPMGVRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLAISIYLLL 353 Query: 357 QK 358 ++ Sbjct: 354 RR 355 >gi|229527564|ref|ZP_04416956.1| hypothetical protein VCG_000633 [Vibrio cholerae 12129(1)] gi|229335196|gb|EEO00681.1| hypothetical protein VCG_000633 [Vibrio cholerae 12129(1)] gi|327484987|gb|AEA79394.1| Predicted Permease [Vibrio cholerae LMA3894-4] Length = 356 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + L ++V + D Sbjct: 180 NKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ R E + + P+ + M L+A S R Sbjct: 239 TVKPEELSLTGLSDYVHYLK-ASEQDTSRYELALWRKVTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ AL P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|229521564|ref|ZP_04410982.1| hypothetical protein VIF_002100 [Vibrio cholerae TM 11079-80] gi|229341158|gb|EEO06162.1| hypothetical protein VIF_002100 [Vibrio cholerae TM 11079-80] Length = 356 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + L ++V + D Sbjct: 180 NKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E + + P+ + M L+A S R Sbjct: 239 TVKPEELSLTGLSDYVHYLK-ASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ AL P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|15642495|ref|NP_232128.1| hypothetical protein VC2499 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227082618|ref|YP_002811169.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229507443|ref|ZP_04396948.1| hypothetical protein VCF_002672 [Vibrio cholerae BX 330286] gi|229509632|ref|ZP_04399113.1| hypothetical protein VCE_001032 [Vibrio cholerae B33] gi|229516757|ref|ZP_04406203.1| hypothetical protein VCC_000774 [Vibrio cholerae RC9] gi|229606949|ref|YP_002877597.1| hypothetical protein VCD_001858 [Vibrio cholerae MJ-1236] gi|254851044|ref|ZP_05240394.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744522|ref|ZP_05418474.1| putative membrane protein [Vibrio cholera CIRS 101] gi|298500670|ref|ZP_07010474.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657080|gb|AAF95641.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227010506|gb|ACP06718.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229345820|gb|EEO10792.1| hypothetical protein VCC_000774 [Vibrio cholerae RC9] gi|229353106|gb|EEO18045.1| hypothetical protein VCE_001032 [Vibrio cholerae B33] gi|229354948|gb|EEO19869.1| hypothetical protein VCF_002672 [Vibrio cholerae BX 330286] gi|229369604|gb|ACQ60027.1| hypothetical protein VCD_001858 [Vibrio cholerae MJ-1236] gi|254846749|gb|EET25163.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738047|gb|EET93440.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297540839|gb|EFH76896.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 356 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + L ++V + D Sbjct: 180 NKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E + + P+ + M L+A S R Sbjct: 239 TVKPEELSLTGLSDYVHYLK-ASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ AL P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|147674275|ref|YP_001217997.1| hypothetical protein VC0395_A2081 [Vibrio cholerae O395] gi|153215714|ref|ZP_01950095.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153831207|ref|ZP_01983874.1| putative membrane protein [Vibrio cholerae 623-39] gi|229513426|ref|ZP_04402890.1| hypothetical protein VCB_001071 [Vibrio cholerae TMA 21] gi|229524482|ref|ZP_04413887.1| hypothetical protein VCA_002077 [Vibrio cholerae bv. albensis VL426] gi|254291417|ref|ZP_04962209.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|297581346|ref|ZP_06943269.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124114632|gb|EAY33452.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|146316158|gb|ABQ20697.1| putative membrane protein [Vibrio cholerae O395] gi|148873314|gb|EDL71449.1| putative membrane protein [Vibrio cholerae 623-39] gi|150422607|gb|EDN14562.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227014389|gb|ACP10599.1| putative Inner membrane protein [Vibrio cholerae O395] gi|229338063|gb|EEO03080.1| hypothetical protein VCA_002077 [Vibrio cholerae bv. albensis VL426] gi|229349303|gb|EEO14259.1| hypothetical protein VCB_001071 [Vibrio cholerae TMA 21] gi|297534184|gb|EFH73022.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 356 Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + L ++V + D Sbjct: 180 NKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E + + P+ + M L+A S R Sbjct: 239 TVKPEELSLTGLSDYVHYLK-ASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ AL P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 355 >gi|262170558|ref|ZP_06038236.1| putative membrane protein [Vibrio mimicus MB-451] gi|261891634|gb|EEY37620.1| putative membrane protein [Vibrio mimicus MB-451] Length = 356 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +L ++V + + D Sbjct: 180 HKKLSTVIFAEQVDYVGNNEWLMKDAQLTRMVN-EIEISKETLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E F+ + P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLSDYVHYLK-ASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ A+ P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|240850231|ref|YP_002971624.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] gi|240267354|gb|ACS50942.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] Length = 363 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 117/360 (32%), Positives = 186/360 (51%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF YLK T YF +L +ID E ++ +P+++ L+ R+P I+ Sbjct: 5 TLGRYFFIRYLKITCYFWGSIFVLALLIDFTENSGRLSSIPHHTAKDAFFLSVLRIPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPFI L + +LN+ ELV++R+IG+S WQ L P +G+ LLG+F++L+INP+ Sbjct: 65 QQLIPFIALFSAMATLISLNKKLELVVTRSIGVSAWQFLMPACLGAFLLGLFSILLINPL 124 Query: 124 ATSGEKIGIDLIQQWKDNG--DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A G + +W++N + I W+ IGAK I + D T Sbjct: 125 AAWGFSQAEKKMTEWRNNNVLTPLHNTDIHWLTQRTNLGRTTIGAKFITDQGLSLLDATF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + + A + N L Y+ G P + +K + + Sbjct: 185 VQYNDNATVKNWINTPKATLTNGSWLLTNGTIYKIGHPPEKFTVLQIKTNLKPEFLTERL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A+ FY++ KK+ + + + F LI +P +LVAMTLIAA+VSL F+R Sbjct: 245 ANPATIPFYQLPKKIMIARSFG-YSANNFDMYFQSLIALPALLVAMTLIAATVSLNFTRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q R ++ G+ +GFMLY I ++++FG +G + P+ AA PV++ + L I LL KEDG Sbjct: 304 GQSRTLILGGVIAGFMLYVISVLVQAFGNAGYIPPIIAAWTPVVIALFLGISFLLHKEDG 363 >gi|253686793|ref|YP_003015983.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753371|gb|ACT11447.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 358 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 135/363 (37%), Gaps = 11/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ YS + VP Sbjct: 1 MFGVLDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQ-GEYSALGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 ++ GE++ + Q G + W + FI +++ + + Sbjct: 120 EWVSPQGEQMARNYRSQMISGGSMISTQGGLW----AKDGNDFIYIERVAGDKELSGVNI 175 Query: 181 SITIDKKNKIIHRKDADLAIIYN-DKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMD 235 D + R A + + +L +V E S T + D Sbjct: 176 YHFDDSNKLLSVRYAASAEFEDDRNVWRLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPD 235 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + + S + + +S + R + + I P+ + M L+A S Sbjct: 236 KLGVVALEPDALSIRGLHNYAKYLKQSGQESS-RYQLNMWSKIFAPVSVAVMMLMAVSFI 294 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + GI GF+ Y + I + + P+ A++P + + +S+ +L Sbjct: 295 FGPLRSVSAGSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLCISVALL 354 Query: 356 LQK 358 L++ Sbjct: 355 LKR 357 >gi|269140437|ref|YP_003297138.1| hypothetical protein ETAE_3096 [Edwardsiella tarda EIB202] gi|267986098|gb|ACY85927.1| hypothetical protein ETAE_3096 [Edwardsiella tarda EIB202] gi|304560230|gb|ADM42894.1| Putative inner membrane protein [Edwardsiella tarda FL6-60] Length = 356 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 142/362 (39%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + T + L + L +I + ++G+ +YS++ + +P Sbjct: 1 MFGVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GDYSVAGAGLFTLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A G++ + Q G + W + N I + + + Sbjct: 120 EWVAPQGDQAARNYRAQQMYGGSLLSTQGGLWAKDGNQFVYIAQ-----VVNDRTLGGVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 T++ + K+ + A A + KL +V E + S T + D Sbjct: 175 IYTLNAQRKLTSLRYAASATFDGKQWKLAQVEESNLTDPKMITGSRTLSGVWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S + R + + I PL + M L+A S Sbjct: 235 LGVVAVSPDSLSISGLYHYVKYLKQSGQESS-RYQLNLWSKIFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + PV A++P L + LS+ +LL Sbjct: 294 GPLRSVPMGVRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLGLSVYLLL 353 Query: 357 QK 358 ++ Sbjct: 354 RR 355 >gi|262401790|ref|ZP_06078355.1| putative membrane protein [Vibrio sp. RC586] gi|262351762|gb|EEZ00893.1| putative membrane protein [Vibrio sp. RC586] Length = 356 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIITLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKLARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVDNEQLTGMNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + +L ++V + D Sbjct: 180 NKKLSTVIFAERVDYVGNNEWLMKDAQLTRLVS-DIEISKESLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E + + P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLSDYVHYLK-ASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ A+ P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|315500013|ref|YP_004088816.1| permease yjgp/yjgq family protein [Asticcacaulis excentricus CB 48] gi|315418025|gb|ADU14665.1| permease YjgP/YjgQ family protein [Asticcacaulis excentricus CB 48] Length = 379 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 83/359 (23%), Positives = 145/359 (40%), Gaps = 3/359 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y L L+ ++F+ID EI +G+ + S + L + P II Sbjct: 22 LTTYIITRCLMAIGTALVVVSSIIFLIDYVEISKSLGQRGDLSSLQIVGLLMLKSPNIIL 81 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++PF L + F LNR SEL+ RA G+S W+ + P + +LG TV V++P A Sbjct: 82 VLLPFAFLFGTLSAFVGLNRRSELIAMRAAGMSAWRFVLPAAGMAAILGALTVTVLSPAA 141 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI-- 182 T Q + + K+ I Q QQ + ++ I F + Sbjct: 142 TVLADQYDRFAAQQSQSDTRAKTGEIYLRQGDGKQQTVIHAREQSEDGRLIDASFWTFSL 201 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + R DA A++ +LK + G + N+ ++ + + Sbjct: 202 DEAEIPRFLTRIDASEAVLRPGTWQLKSARVSKPGETTLYYNTLSIGSNLSPERAFNRFA 261 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S +F+++ ++ S F + L+ PLM AMT + A+ SL R Sbjct: 262 APQSTNFWQLPGTIAQIESSG-FSAAGYVLRLNQLLATPLMFAAMTALGAAFSLRLMRIG 320 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + GI GFM++ + + S GK+ ++ A ++ +L+ EDG Sbjct: 321 GLARLTLSGIVLGFMVFFLNQLCGSLGKAEVIPAFLAGWATPFAAFLTAMTLLVYTEDG 379 >gi|50119364|ref|YP_048531.1| putative permease [Pectobacterium atrosepticum SCRI1043] gi|49609890|emb|CAG73325.1| putative permease [Pectobacterium atrosepticum SCRI1043] Length = 358 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 128/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ YS + VP Sbjct: 1 MFGVLDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQ-GEYSALGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 ++ GE++ + Q G + W + N I F Sbjct: 120 EWVSPQGEQMARNYRSQMISGGSMISTQGGLWAKDGNNFIFIERVTGDKELSGVSIYRFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + + ++ + +I + S + D Sbjct: 180 DQNKLLSVRYAASAEFEDDRNVWKLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + S + + +S N R + + I P+ + M L+A S Sbjct: 240 VALEPDALSIRGLHNYAKYLKQSGQESN-RYQLNMWSKIFAPVSVAVMMLMAVSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF+ Y + I + + P+ A++P + + +S+ +LL++ Sbjct: 299 RSVSAGSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLFISVALLLKR 357 >gi|330448736|ref|ZP_08312383.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492927|dbj|GAA06880.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 357 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 118/358 (32%), Gaps = 2/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + T+ L + L +I E ++G+ +Y + + +P Sbjct: 1 MFKILDWYIGRTIIATSALTLSTLVGLSAIIKYVEQLRKVGQ-GSYDLLKALYFVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L +SELV+ +A G S + + ++ + I VL+ Sbjct: 60 QDIIMFFPMAVLLGALIGLGMLASSSELVVMQASGFSKLDIGLSTLKTAVPMMIIVVLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ + W G + W + N + + F Sbjct: 120 QWGAPQAQKMAREYRSAWVYGGSVIAAQSGVWAKNDNDFIYMGRVHDLNKVDVVNIWKFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + D + + S + + D Sbjct: 180 NKGKLEDVTSAKTASYDKSTGWTMHDVTITDTAGNSKLTNSHVASMKWDTTMTPDKLAVV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + +S+ +S R E F+ + P + M L+A S R Sbjct: 240 TVKPEELPLSGLYNYVSYLKES-KQDASRYELAFWRKALQPFSIAVMMLLALSFVFGPLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ GF Y + L P+ AL P ++ + ++I +L +K Sbjct: 299 SVTMGARVLSGVIFGFAFYISDQVFGPMILVYRLPPIIGALGPSLVFLFITIYLLRRK 356 >gi|227114630|ref|ZP_03828286.1| putative permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327172|ref|ZP_03831196.1| putative permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 358 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 128/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ YS + VP Sbjct: 1 MFGVLDRYIGKTIFTTIMTTLFMLVSLSGIIKFVDQLRKVGQ-GEYSALGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 ++ GE++ + Q G + W + N I F Sbjct: 120 EWVSPQGEQMARNYRSQMISGGSMISTQGGLWAKDGNDFIYIERVTGDKELSGVNIYHFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + + ++ + +I + S + D Sbjct: 180 DKNKLLSVRYAASAEFEDDRNVWKLSQVDESDLSDGKQIGGSQTFSGEWKTNLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + S + + +S N R + + I P+ + M L+A S Sbjct: 240 VALEPDALSIRGLHNYAKYLKQSGQESN-RYQLNMWSKIFAPVSVAVMMLMAVSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF+ Y + I + + P+ A++P + + +S+ +LL++ Sbjct: 299 RSVSAGSRIVIGISFGFLFYLLNEIFRPLSLVYGIPPILGAILPSSVFLFISVALLLKR 357 >gi|317494175|ref|ZP_07952591.1| inner membrane protein yjgQ [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917948|gb|EFV39291.1| inner membrane protein yjgQ [Enterobacteriaceae bacterium 9_2_54FAA] Length = 356 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 138/362 (38%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + T + L + L +I + ++G+ +YS + + VP Sbjct: 1 MLGVLDRYIGRTIFSTIMATLFMLVSLSGIIKFVDQLRKVGQ-GDYSAAGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + + +I L I T+ + Sbjct: 60 KDIEVFFPMAALLGALLGLGMLAQRSELVVMQAAGYTRMQIASSVMKTAIPLVILTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE+ + Q G + W + + + + + Sbjct: 120 EWVAPQGEQAARNYRAQQMYGGSLLSTQTGLWAKDG-----TDFIFIQRVTGEKSIQGVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + D + + + A+ A + KL +V E S T + D Sbjct: 175 IYSFDNERHLQKLRYANSATFEGHQWKLSQVEESNLTDSKRITGSQTLNGVWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S + R + + I PL + M L+A S Sbjct: 235 LGVVAMSPDSLSISGLYHYVKYLKQSGQESS-RYQLNMWSKIFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF Y + I + PV A++P +L + +S+ +LL Sbjct: 294 GPLRSVPMGVRVLTGISFGFFFYVLDEIFGPLSLVYSVPPVLGAILPSLLFLLISVYMLL 353 Query: 357 QK 358 +K Sbjct: 354 RK 355 >gi|149907703|ref|ZP_01896450.1| hypothetical protein PE36_07437 [Moritella sp. PE36] gi|149809373|gb|EDM69302.1| hypothetical protein PE36_07437 [Moritella sp. PE36] Length = 355 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 125/360 (34%), Gaps = 10/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y K L T+ L + L VI E +G Y + + ++P Sbjct: 1 MIKILDIYIGKAILFATMICLFTLVGLSAVIKYVEQLRAVG-RGTYGLLEALMYVMLKMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L +SELV+ +A G S ++++ + +I + I +L+ Sbjct: 60 REITIFFPMAALLGALIGLGALASSSELVVIQAAGQSRFKIVLSTMKTAIPMMIIVMLMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E+ L + ++ W + +I + D T Sbjct: 120 EYVAPYTEQKAAQLRGEATSGQSIIRAQKGVWAKDKENFINIGK-----VNNGSELHDVT 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGF 237 +++ A A +L + + R ++ + + + + Sbjct: 175 IYEFAGNQRLVKTTQARRATYTGKYWQLTDLRITHFERDSISVTEQATQRWDSTLTPEKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + S + +++ + SN E F+ I PL + M L+A S Sbjct: 235 DVVTIDPEDLSISGLYSYITYLD-SNKQDAGSYELAFWRKIFQPLSIGVMVLLALSFVFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ + G+ +GF Y L P A++P + ++I+ L + Sbjct: 294 PLRTVTMGARILMGVVAGFTFYLASETFGPISLVYSLPPFLGAVVPSAIFTLIAIVQLRK 353 >gi|163868027|ref|YP_001609231.1| hypothetical protein Btr_0826 [Bartonella tribocorum CIP 105476] gi|161017678|emb|CAK01236.1| hypothetical transmembrane protein [Bartonella tribocorum CIP 105476] Length = 363 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 117/360 (32%), Positives = 187/360 (51%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF YLK T YF +L +ID E ++ LP+Y+ +L+ R+P I+ Sbjct: 5 TLGRYFFIRYLKITCYFWGSIFVLALLIDFTENSGRLPSLPHYTAKDAFLLSVLRIPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPFI L + +LN+ ELV++R+IG+S WQ L P +G+ LLG+F++L+INP+ Sbjct: 65 QQLIPFIALFSAMTTLISLNKKLELVVTRSIGVSAWQFLMPACLGAFLLGLFSILLINPL 124 Query: 124 ATSGEKIGIDLIQQWKDNG--DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A G ++ +W++N + I W+ IGAK I + D T Sbjct: 125 AAWGFSQAEKMMTEWRNNNVLTSLHNTRIHWLTQRTDLGRTTIGAKFITDQGFSLLDATF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + A + + L Y+ G P + +K + + Sbjct: 185 VQYKDDATVKNWINTPKATLTHGAWFLTNGTIYKIGHPPEKFTVLKIKTNLKPEFLTERL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A+ FY++ KK+ + + + + LI +P +LVAMTLIAA+VSL F+R Sbjct: 245 VNPATIPFYQLPKKIMIARSFG-YSAHNFDMYLQSLIALPALLVAMTLIAATVSLNFTRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q R ++ G+ +GFMLY I ++++FG +G + P+ AA PV++ + L I LL KEDG Sbjct: 304 GQSRTLILGGVIAGFMLYVISVLVQAFGNAGYIPPIIAAWTPVVIALFLGISFLLHKEDG 363 >gi|258625834|ref|ZP_05720713.1| Predicted permease [Vibrio mimicus VM603] gi|258582072|gb|EEW06942.1| Predicted permease [Vibrio mimicus VM603] Length = 356 Score = 149 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKLARDMRAFATSGGAIMSVRTGVWARDANDFIFIGKVDNEQLIGMNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +L ++V + + D Sbjct: 180 HKKLSTVIFAEQVYYVGNNEWLMKDAQLTRMVN-EIEISKETLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ + R E F+ + P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLSDYVHYLK-ASEQDSSRYELAFWRKMTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ A+ P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAVAPSLVFLTIALGLLGRK 355 >gi|209694121|ref|YP_002262049.1| putative permease [Aliivibrio salmonicida LFI1238] gi|208008072|emb|CAQ78213.1| putative permease [Aliivibrio salmonicida LFI1238] Length = 358 Score = 149 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 123/359 (34%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + T+ L+ + L +I E ++G+ Y + +P Sbjct: 1 MFKILDWYIGRTIIATSSLCLVTLVGLSSIIKYVEQLRKVGK-GTYDLLDALYFVILSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + +I L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLDIGISVLKTAIPLMLMVMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G+ W + N + + F Sbjct: 120 QWGAPQAQKMARDLRAFSISGGNIASMRTGVWAKDGNDFIYLSRVDDQAKLYGVTLWQFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQK 239 + + + + + I K +S + + + D Sbjct: 180 KERKLDDIVFAKKAEYESKEEGWKLIDVSITDMKDENIITEKKLDSLSWSTTLTPDKLAV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + +S + +++ S R E F+ + P+ + M L+A S Sbjct: 240 VSVKPEEQSLTGLYDYVNYLKDS-ELDASRYELAFWRKALQPISVAVMMLLALSFVFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G+ +GF Y + + P+ AL P + + +++ +L +K Sbjct: 299 RSVTMGARILSGVIAGFSFYISNEVFGPMTLVYNIHPIFGALGPSFVFLLITLGLLNRK 357 >gi|37681089|ref|NP_935698.1| permease [Vibrio vulnificus YJ016] gi|320155253|ref|YP_004187632.1| putative Permease [Vibrio vulnificus MO6-24/O] gi|326423844|ref|NP_760390.2| lipopolysaccharide ABC transporter permease [Vibrio vulnificus CMCP6] gi|37199839|dbj|BAC95669.1| predicted permease [Vibrio vulnificus YJ016] gi|319930565|gb|ADV85429.1| predicted Permease [Vibrio vulnificus MO6-24/O] gi|319999214|gb|AAO09917.2| putative membrane protein [Vibrio vulnificus CMCP6] Length = 357 Score = 149 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++G+ Y + +P Sbjct: 1 MFKILDLYIGRTIVATTSLVLVTFVGLSGIIKYVEQLRKVGK-GTYDLLHALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + + + Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGVSVLKTAVPLMLVVMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I + L ++W+ Sbjct: 120 QWGAPDAQKMARDLRSFALSGGSIVSVRSGVWAKDANDFIFIGKVDEDKLYGLNMWKFDQ 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + V++ + + + + D Sbjct: 180 NKKLQSVIFAEEVDYQQDNRWLMRYVQITDMQD-EKVISKHSLEQMEWETSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R E F+ + P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVTYLK-ASEQDASRYELAFWRKLTQPISIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + PV A+ P I+ +++++L +K Sbjct: 298 SVTMGARVISGVIAGFAFYISSEFFGPLTLVYGIPPVFGAVAPSIVFFIVAVMLLNRK 355 >gi|309390182|gb|ADO78062.1| permease YjgP/YjgQ family protein [Halanaerobium praevalens DSM 2228] Length = 366 Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 123/363 (33%), Gaps = 8/363 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L +Y +K + + + + DL + + L ++P Sbjct: 1 MKTLNKYIYKELIAPFFFGVAAFTGIFIGTDLIFELTEFYTKWGVEVFTLIKLFFLKLPE 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P +L+ I+ + L+ SE+ RA G+SI L+ P ++ +L T+ + Sbjct: 61 IIVLTFPMASLLGTIMAYNRLSGDSEITAMRAGGVSILALVMPALILGLLTSGVTIGISE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM--QISNPQQDIFIGAKKILPENHIWEDF 179 + + ++ Q + + ++ ++ S ++ ++ + Sbjct: 121 FLVPNANYQAEQIMYQAQHGEQRPETQYDLFLTPMDSRTRRPDYMLYAHSFNGDSGIMKD 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKM 234 + + K +A+ A +D + Y R + Sbjct: 181 VVVQSFEDGKPDSVLEAESAEWLSDGWHFYDGIIYFLDRENRQPALEFSTYRSREEIHSP 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 K + + E+ + ++ + +F+ IPL L+AA + Sbjct: 241 TQAGKLGKDIDEMNIRELNEHIALKEEQGRQAYAE-RVEFHHRFSIPLASFIFALLAAPL 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ RS I F+ Y ++T+ + G G + P A + I+ + + + Sbjct: 300 GIKPQRSAGSATGFGISIIVIFIYYVLMTVGDALGSQGTIEPWLGAWLQNIVIFVVGLAL 359 Query: 355 LLQ 357 L + Sbjct: 360 LFK 362 >gi|83313005|ref|YP_423269.1| permease [Magnetospirillum magneticum AMB-1] gi|82947846|dbj|BAE52710.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 367 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 74/363 (20%), Positives = 159/363 (43%), Gaps = 6/363 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ Y + + LL + ++ + D+ E+ + P I+ ++A ++P ++ Sbjct: 6 IMSGYIGRQFASAFATVLLVILGIILLFDVIELIRRAAGRPELGITPILLMAFFKLPQML 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+PF ++ ++V F+ L RT ELV++RA GIS+WQ + P + + + GIF + NP+ Sbjct: 66 HTILPFAVMIGSMVCFWRLTRTHELVVARAAGISVWQFITPVLAVAGIFGIFEITTFNPM 125 Query: 124 ATSGEKIGIDLIQQ--WKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE--DF 179 A + L + S++ W++ + ++ + ++ + + + D Sbjct: 126 AAAMYGRYERLQDELLATKASAFDISEVGLWLREPHENGEMVVHSETVRQDGLVLHIRDA 185 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 D+ + R A+ A + + ++++ + G+ + K + + +D Sbjct: 186 HFFLYDRPDHFHQRISAESATLVDGAFEVRRAWVMEGGKPSVFKEQMHIPTQLTLDRIHD 245 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + SF+++ + F ++ F + L+ P++ M L+AA SL + Sbjct: 246 NFASPETLSFWQLPGFIRFFERAG-FTANKHRLYLQSLLASPVLYCGMVLMAAVFSLRPN 304 Query: 300 -RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G+ +GF +Y ++ + G S L AA P + + + L Sbjct: 305 TRSGGLLARIGAGVAAGFAVYFFSKVIYALGLSATLPQTLAAWTPPLFAGLIGLSGLFHL 364 Query: 359 EDG 361 EDG Sbjct: 365 EDG 367 >gi|56461046|ref|YP_156327.1| permease [Idiomarina loihiensis L2TR] gi|56180056|gb|AAV82778.1| Predicted permease [Idiomarina loihiensis L2TR] Length = 356 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 131/358 (36%), Gaps = 10/358 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL +Y L+T+L L L +I E +G +Y++ A+ +P Sbjct: 1 MFSILDKYIGLSVLRTSLLSLAVLTGLSSLIRFVEQLKAVG-RGDYNVMDAALFVFYSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L SELV+ A G S ++ + +I++ + + + Sbjct: 60 RDVETFFPMAALLGGLIGVGMLASNSELVVMMAAGRSRLNIIGAVMKSAIIMMVAVMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA E G + Q G + W + + +I + + D Sbjct: 120 EWIAPPMEAQGRAIRSQAISGGSLISAQQGVWAKDGSDFINIGE-----VEDTGRLNDVL 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGF 237 + ++ A A DK ++++V + +K S + D Sbjct: 175 IYDFNDNRELQKVTYARTANFSGDKWRMQQVTVTQLDDIRMLRDEKPSMVWQSSLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S S ++ +++ SN R E + + P+ + M L+A S Sbjct: 235 GVVTIKPESLSITGLLDYLTYLE-SNQQSAERYELALWRKLFAPITVAVMLLVALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + G+ +GF + I + + + AL+P IL +++ + Sbjct: 294 PLRSTTMGARILLGVITGFGFHVSNEIFGPLAQVYQIPAILGALLPSILFAGVAVYFM 351 >gi|90411865|ref|ZP_01219873.1| putative permease [Photobacterium profundum 3TCK] gi|90327123|gb|EAS43495.1| putative permease [Photobacterium profundum 3TCK] Length = 356 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 126/361 (34%), Gaps = 9/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E ++G+ Y + + + +P Sbjct: 1 MFKILDWYIGRTIIATTALTLSTLVGLSAIIKYVEQLRKIGD-GTYDLWKALIYVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + +++ Sbjct: 60 RDIEMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMVLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K +L W G+ W + FI ++ ++ + Sbjct: 120 QWGAPQAQKSARELRAIWTSGGNMLSVQSGVW----AKDGNDFIYIGRVHEQSTLNAVNI 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGF 237 D+ + L V + + ++ + D Sbjct: 176 WQFDDEDTLSKMVFAKSASFTDEQGWLLADVTVTNISKIQQTNTKFDTLPWKTSLSPDKL 235 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + +S+ +S R E F+ ++ P+ + M L+A S Sbjct: 236 AIVTVKPEELALSGVYDYVSYLKES-KQDASRYELAFWRKLLQPISIAVMMLLALSFVFG 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF Y + L P AL P ++ + ++I +L + Sbjct: 295 PLRSVTMGARVLSGVIFGFTFYISNEVFGPMSLVYRLHPAIGALGPSLVFLLITIYLLRR 354 Query: 358 K 358 K Sbjct: 355 K 355 >gi|238921309|ref|YP_002934824.1| hypothetical protein NT01EI_3453 [Edwardsiella ictaluri 93-146] gi|238870878|gb|ACR70589.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 356 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 142/362 (39%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + T + L + L +I + ++G+ +YS++ + VP Sbjct: 1 MFGVLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GDYSVAGAGLFTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGMLAQRSELVVMQAAGFTRMQVASAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A G++ + Q G + W + N I + + + Sbjct: 120 EWVAPQGDQAARNYRAQQMYGGSLLSTQGGLWAKDGNQFVYISQ-----VVNDRTLGGVS 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 T+D + K+ + A A + KL +V E + S T + D Sbjct: 175 IYTLDAQRKLTSLRYAASATFDGKQWKLAQVEESNLSDPKMITGSRTLSGVWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S + R + + + PL + M L+A S Sbjct: 235 LGVVAVSPDSLSISGLYYYVKYLKQSGQESS-RYQLNLWIKVFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + PV A++P L + LS+ +LL Sbjct: 294 GPLRSVPMGVRVLTGICFGFVFYVLDQIFGPMSLVYNVPPVIGAVLPSALFLGLSVYLLL 353 Query: 357 QK 358 ++ Sbjct: 354 RR 355 >gi|144900091|emb|CAM76955.1| permease YjgP/YjgQ family [Magnetospirillum gryphiswaldense MSR-1] Length = 367 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 82/363 (22%), Positives = 159/363 (43%), Gaps = 6/363 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + +L L + +VF+ D+ E+ + + + +A ++P ++ Sbjct: 6 TLSAYIGRQFLLAFASVLAVILGVVFLFDIIELIRRAAGRGDLGVFNLVAMALLKLPQMM 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++PF ++ +V F+ L RT ELV++R+ GIS WQ L P +V LG+ + NP+ Sbjct: 66 HTVLPFAVMIGAMVAFWRLTRTHELVVARSAGISAWQFLTPVLVLVAGLGVIELTAFNPM 125 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWE--DF 179 A + + + S++ W++ + Q+ I + A ++ E Sbjct: 126 AATMYGRFQKMEDEILLGKTSALDVSEMGLWLREGDAQRQIVLHADQVQQELLTLNLRGV 185 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 ++ + R A + + ++L V E + G+ + + L + ++ Sbjct: 186 HVFVLNAEEHFTRRLSAASGRLADGVLELTDVWEMEGGKSSVHHPALKLATELTLERVHD 245 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + SF+++ ++F K+ F + F L+ PL+ AM L+AA SL + Sbjct: 246 NFASPETMSFWQLPAFITFFEKAG-FAATKHRMHFQSLLSSPLLYCAMVLVAAVFSLRPN 304 Query: 300 -RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + V G+ +GF +Y I+ +FG S L AA P ++ + + LL Sbjct: 305 MRAGGLLMRVGGGVAAGFGIYFFNKIIYAFGLSATLPQGLAAWSPALVAGLIGVSGLLHL 364 Query: 359 EDG 361 EDG Sbjct: 365 EDG 367 >gi|77165378|ref|YP_343903.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|254434004|ref|ZP_05047512.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] gi|76883692|gb|ABA58373.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|207090337|gb|EDZ67608.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] Length = 354 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 118/360 (32%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + TL L + L + +GE +Y + +P Sbjct: 1 MKILDRYIAKAVISYTLLVLFILIALYTFLQFVTELEDVGE-GDYGVMGALRYTTYSIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++P L+ +++ L SELV RA G S+ ++ + ++ I TVL+ Sbjct: 60 HIYDLLPVAALLGSVLGLGYLAGQSELVAMRAAGFSVGRITLSALATGMIFVIVTVLMGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ L K + W + + N +E Sbjct: 120 VVAPPAQQAANKLRSLAKTGHLSEDGGQGFW-----SRNGNNFNHVGRVLPNGQYEYIEI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQ 238 D + ++ A AI + D L V + G + + + Sbjct: 175 FEFDDQRRLRIVTQAARAIYHKDGWHLYDVTQRLISTKGITTRRLDEALWESGLNPEMLD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + + + + + + F+ IV P + M +A Sbjct: 235 VVMVDPQQLSAWGLYRYIGYL-QKSKQAAEQYRQAFWSKIVAPFSTLIMMFLAIPFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G G + + G L P A P +L ++L +++L + Sbjct: 294 LRSVSVGQRILVGALVGIGFFLFNRLFNQLGLVFDLPPWLGAAFPSLLCLALGVVMLRRI 353 >gi|319784424|ref|YP_004143900.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170312|gb|ADV13850.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 360 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 191/359 (53%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y+ T++F +G + LVF+ID E+ + LP ++ ++ R+P+I+ Sbjct: 4 TLGRYFFFRYVTITIWFFIGLLALVFLIDFTELSGRTTGLPGFTYGTAVAISGLRMPMIM 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q +PF+ L + +LNR ELVI+R+ G+S WQ L P +G++L G+ +V VINP+ Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGVLSVGVINPL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKS-DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A + Q + S D PW++ D IGA+ IL + D Sbjct: 124 AAHAFSWSEQIETQLRSGKSNTVSADAAPWIRQKTSSGDTIIGARAILNQGLEMADVVFF 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +D + I+ RKDA A + + +L+ V +Q G I + + +K + Q+ Sbjct: 184 ILDPQGNIVERKDAARAFLRDGYWELQDVKTFQNGTIQAS-ATDRVPTNLKPEFVQERLA 242 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + FY++ K+ + + N QF L+ +P +LVAMTLIAA+VS+ F+R Sbjct: 243 RPETIPFYDLPGKIEVARSFGLKANA-FAMQFDSLVALPFLLVAMTLIAATVSMRFARMG 301 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ GI +GF+LY + ++K+FG +G + V AA +PV++ + + LL KEDG Sbjct: 302 QSATMILGGIIAGFLLYVVSVLVKAFGVAGFVPTVVAAWVPVMVAMFFGVTFLLYKEDG 360 >gi|308050967|ref|YP_003914533.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] gi|307633157|gb|ADN77459.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] Length = 354 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 128/361 (35%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + T+ LL L +I + +G +++ A+ VP Sbjct: 1 MIRILDLYIARTIINTSALCLLVLTGLSGLIKFVDQLRLVG-RGDFTTWDVALYVLFLVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P ++ ++ L +SELV+ +A G+S + + ++ L I +L+ Sbjct: 60 RDIEMFFPIAAMLGALIGMGMLASSSELVVMQAAGLSRLNIAASVMKTAVPLMIIAMLIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E+ ++ Q G S W + +I + + + T Sbjct: 120 EYVAPVSEQTAREMRAQKTSGGSLISSSTGTWAKDGELFVNITE-----VQDARTLKGVT 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI---DKNSTTLNIPIKMDGF 237 D N + A+ + +L V E + D++ + + Sbjct: 175 IYRFDGDNLLREITFAEQGLYDGKAWRLLDVTETDLTDEQVSTLDRDELRWPSSLTPEKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 Q + + S +I + + +N R E + + P+ + M ++A S Sbjct: 235 QVVTVKPEGLSIEGLIDYVDYLK-ANRQDTTRYELALWRKVAQPITVGVMMMLALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A++P IL + +L + Sbjct: 294 PLRTVTMGARVLLGVITGFSFYIANEIFGPMSLVMGLPTFLGAMLPSILFAIAAFALLQR 353 Query: 358 K 358 + Sbjct: 354 R 354 >gi|78188283|ref|YP_378621.1| hypothetical protein Cag_0302 [Chlorobium chlorochromatii CaD3] gi|78170482|gb|ABB27578.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 359 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 132/360 (36%), Gaps = 3/360 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY F+ ++K L+ L + L +I++ E + + S A +P Sbjct: 1 MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMD-HHVSALEIARYYLLSIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P L+ +I+V L +EL R+ G+S+ QLL PF G++LL +F Sbjct: 60 IFLVTSPVSALLASILVAGKLATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAG 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE-NHIWEDFT 180 +A + Q + + + S + I N++ + Sbjct: 120 WLAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFISIGAFNPINESLNNVSIERL 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S + ++ + + K + T+ + ++ + Sbjct: 180 SGATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEM 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 Q + + + ++ R+ +F+ I +P + +TLI ++ R Sbjct: 240 RLQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLAARKKR 299 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 +A +F GF+ I + G G+L P+ AA +P +L + + ++ + D Sbjct: 300 -GGIAAEIAITLFIGFLYLGIQRTIAIAGYQGVLPPIVAAWLPNLLFLVVGWVLYKKSTD 358 >gi|268592782|ref|ZP_06127003.1| membrane protein, YjgP/YjgQ family [Providencia rettgeri DSM 1131] gi|291311563|gb|EFE52016.1| membrane protein, YjgP/YjgQ family [Providencia rettgeri DSM 1131] Length = 358 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 134/359 (37%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L + L L + L +I E ++G+ +Y+ V VP Sbjct: 1 MFGVLDRYIGRTILNSILVTLFLLVSLAGIIKFVEQLRKVGD-GDYTALSAGVFTLLTVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L SELV+ +A G + Q+ + ++ L I + + Sbjct: 60 KDIDIFFPMAALLGALMGLGALASRSELVVMQASGFTRLQIALSVMKTAVPLVIVAMFIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA +GE+ + + +D W + +N I ++ F Sbjct: 120 EWIAPAGEQWARNYRAEKIVGNSLVVTDEGMWAKDANDFIHIQRINNATSIQDVSIYRFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKK-VVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 K + D ++ + ++ + + + + + Sbjct: 180 DQRKLKSVMFAANGEYDSTNQLWVLSQVDESILSSEKKITGSQRLTVDWKTNLTPEKLGI 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S S S + + +S+ +S E + I+ PL M L+A S Sbjct: 240 VSLNADSLSIRGLYQYVSYLKESGQVAAV-YELSMWKKILAPLSAAVMMLMAVSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + V GI GF+ Y + ++ + P+ AA +P +L + +SI +L+++ Sbjct: 299 RTVPMGVRVISGIVGGFLFYVLNQGFGNWSLVYSVPPIIAAALPSVLFLIVSITLLVKR 357 >gi|291616052|ref|YP_003518794.1| YjgQ [Pantoea ananatis LMG 20103] gi|291151082|gb|ADD75666.1| YjgQ [Pantoea ananatis LMG 20103] Length = 378 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 126/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T L L + L +I + + G+ YS VP Sbjct: 21 MFRVLDRYIGKTIFNTILMTLFMLVSLSGIIKFVDQLRKTGQ-GAYSALDAGYYTLLSVP 79 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 80 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIG 139 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + N I + +FT Sbjct: 140 EFVAPQGEQMARNFRAQQLYGGALVSTQSGLWAKDGNNFIYIERVKGDDEIDGVSIYNFT 199 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + + ++ + +I ++ + + D Sbjct: 200 DDRRLQSVRYAATAKWNKDKKLWVLSQVDESNLTDPKQITGSQSLTGEWKTSLTPDKLGV 259 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +S R + I PL + M L+A S Sbjct: 260 VALDPDALSITGLYDYSKYLKQSGQESG-RYRLNMWSKIFQPLSVAVMMLMALSFIFGPL 318 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I L P+ A++P ++S+ +L+++ Sbjct: 319 RSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPIFGAILPSFAFFAISLFMLIKR 377 >gi|327481778|gb|AEA85088.1| permease [Pseudomonas stutzeri DSM 4166] Length = 353 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 128/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L + L + + + NY + P Sbjct: 1 MVK-LDRYIGIHVFLAILTVLGIIVGLALLFAFIDELGDV--QGNYGLGDALQYVLLTSP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P L+ ++ L +SEL I RA G+S+ +++ + ++L + +L+ Sbjct: 58 RRLYDMLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVLSVMKPMLVLLVAGILIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E I + G+ Q S W + N + + + T Sbjct: 118 EYVAPLTEDIAQARRSLAQGAGEAQSSKRGLWHRQENEFVHV-----NAVQPGGVLVGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGF 237 D++ +++ A A D +L+ + + + ++ + Sbjct: 173 RYRFDEERRLLSSSFARRASYQGDHWRLENIATTHFRGDHTEVARAPEERWDVQLTPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S + + + + + +N R F+ ++ P + VA+ L+A S Sbjct: 233 GTVVMEPEALSITGLWRYIHYLGEQG-LNNSRYWLAFWTKVLQPAVTVALVLLAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + G+ GF+ I ++ + P+ A ++P + + +L + Sbjct: 292 PLRSVTLGQRIFTGVVVGFVFRIIQDLLGPASQVFGFSPLLAVVLPACVCALIGAWLLRR 351 >gi|312884632|ref|ZP_07744335.1| hypothetical protein VIBC2010_15702 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367724|gb|EFP95273.1| hypothetical protein VIBC2010_15702 [Vibrio caribbenthicus ATCC BAA-2122] Length = 356 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 122/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y K + TT L + L +I E ++GE Y + + +P Sbjct: 1 MFKILDLYIGKTLIATTSLVLATFVGLSAIIKYVEQVRKVGE-GTYDLIQALFFVILSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLNIGMSVLKTAVPLMVLVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G W + +N I + ++W Sbjct: 120 QWGAPQAQKMARDLRTFATSGGALMSVRTGVWARDANDFIFINKVDDDKIYGLNMWRFND 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + I ++ + + + D Sbjct: 180 QKQLSQTLFAKEVDYVSENIWVMKDAEVTDMEG-EVKLEKHFLKEYEWKTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + +S+ S+ R E F+ + PL + M L+A S R Sbjct: 239 TVKPEELSLGGLYEYVSYLK-SSEQDPSRYELAFWRKVTQPLSIGVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + P+ A++P + + ++I +L +K Sbjct: 298 SVTMSARILSGVIAGFTFYISSEFFGPLSLVYNIPPIFGAIMPSCVFLLIAIFLLQRK 355 >gi|319404055|emb|CBI77643.1| conserved membrane hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 363 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 195/360 (54%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF YLKT +FLLG ILV +ID E +++ LP+Y+ +++ R+PLI+ Sbjct: 5 TLGRYFFMLYLKTVCFFLLGVFILVLLIDFTENSSKLALLPHYTAKGAFLISLLRIPLIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+ PFI L I + +LN+ ELV++R+IGIS WQ L P G+ L G+F++L INP+ Sbjct: 65 QQLFPFIALFSAITMLISLNKKLELVVARSIGISAWQFLAPACFGAFLFGLFSILFINPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A +I +W+ N + IPW+ I +GAK I+ ++ D T Sbjct: 125 AAWSSSQAKKMIAEWRSNSAQISTTDTRIPWLTQHTNLGRITVGAKSIIYQDLSLIDATF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ + + + A + + L Y+ G+ P + +K + ++ Sbjct: 185 VQYNENATVKNWINTKKATLTDGAWLLTNGTIYKIGQTPEKFTELRIKTHLKPEFLTEYL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + FY + KK++ + + + + LI +P++LVAMTLIAA+VSL+ R Sbjct: 245 TDPITIPFYTLPKKIAVARSLG-YSANKFDMHLQSLIALPMLLVAMTLIAATVSLKIPRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q R ++ G+ +GF+LY I +++SFG +G + P+ AA +PVI+ + +I LL EDG Sbjct: 304 GQSRTLILGGVIAGFILYVISMLVQSFGNAGYIPPIIAAWVPVIVALFFAISFLLYTEDG 363 >gi|226940337|ref|YP_002795411.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] gi|226715264|gb|ACO74402.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] Length = 357 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 125/361 (34%), Gaps = 9/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + +++ LL + L D+ +G YS S V+ A ++P Sbjct: 1 MKILTRYIGGNVIAASIFGLLALLSLFAFFDVLSELTDIG-RGGYSFSDVLVVVALKLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L +SE + R G+S+ Q+ L + T + Sbjct: 60 HAFELMPLAVLIGTMVAMSLLAGSSEYAVMRTSGMSLGQVARILAGIGALFAVLTFVTGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ Q W++ N FI +++LP+N + Sbjct: 120 FAAPWAEQASERTKLQSTGAVISGDFRSGAWIKDDNH----FINVREMLPDNTLLGINIY 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 R + +L+ + E + D S ++ + Sbjct: 176 TYDKNDRLTDVRYARRAIYQPDGSWQLEDIKETRIEANRTIARDLPSQRWESILQPELLS 235 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S ++ + + N + R E + + PL + M L+A + + Sbjct: 236 TLLVEPERMSVADLGRYIEHLAT-NRQNTLRYEIALWGKLFYPLACLTMALVALAFTPVN 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + GI G Y I + G P L+P ++ +++ L+++ Sbjct: 295 QRQSNLGSRIFVGILIGLAFYFINRLFGHLGLLYGWSPPLVTLLPTLIFLAVGTWFLVRQ 354 Query: 359 E 359 E Sbjct: 355 E 355 >gi|193215417|ref|YP_001996616.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] gi|193088894|gb|ACF14169.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] Length = 360 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 140/361 (38%), Gaps = 9/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY F+ Y T + +L + L ++DL E + + N + A P Sbjct: 1 MKILDRYIFREYFSTLGFAILAFVSLFILVDLIEKVDDFLDK-NVELKLIAQYYLYFTPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II+ I+P TL+ ++ V L + +EL +A GIS+++LL PF + ++G + Sbjct: 60 IIKLIVPISTLLASLFVTGKLAKQTELTAMKAGGISLYRLLLPFFLVGAIIGGIDFYLSG 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K + + S + NP + + IG + ++ + Sbjct: 120 WVVPETTKFKEQFDATYLGKTKWKSSSFSNIELLENPNRIVRIGY--FNKDTRTCQNVSL 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST-----TLNIPIKMDG 236 K + + A + + + Y+ + ++ S T+ + Sbjct: 178 QNYQKSHMLWRIDAAKMTYDTSLSRWIFYQAYYRDFQSGKEQFSYAAKIDTVQLVFSAKE 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 ++ + S E K + ++ + A +++ I P+ + + LI +S Sbjct: 238 LEENNAALDQMSLDEHWKYIEARRRAGFSNVDEALVKYHIKISFPIACLIVILIGVPLSA 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 E RS + + GF+ + + G G + P+ +A IP L +++ ++ L Sbjct: 298 EKKRSG-IALEAGISLLIGFLYIILQKTFSTLGYKGAVDPILSAWIPNFLFLTVGLVFLF 356 Query: 357 Q 357 + Sbjct: 357 K 357 >gi|86605895|ref|YP_474658.1| YjgP/YjgQ permease [Synechococcus sp. JA-3-3Ab] gi|86554437|gb|ABC99395.1| putative permease, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 400 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 124/373 (33%), Gaps = 19/373 (5%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G++ RY L + + LV + ++ S+S + R P I Sbjct: 26 GLMDRYIISEMLLPFFFGVGAFTTLVMAVGSLFELVRLVVEAGLSLSAALQVFVLRAPGI 85 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I P L+ ++ + L+ +E+ R G+S+++L+ P ++ S+L+ T L Sbjct: 86 IVLTFPMSMLLATLLAYGRLSADNEITALRGCGVSLYRLVVPALLLSLLVTTLTFLFNEL 145 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN-----------------PQQDIFIG 165 + + + + + + + + I + + Q Sbjct: 146 VVPVSNRQAALTLNRALNRTPEFRRENILYQEFGEILAPEPDGTFSRRQGLTRQFYARSF 205 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 + + + + R D + ++ V Sbjct: 206 DGQQMRGVIVLDLSNEALSQILLAQQGRWDPQENLWVFEEGTNYIVSPDGTYSNIATFAR 265 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLML 284 L +P + + E+ + + S R + IP Sbjct: 266 QELRLPRAPLDLAQEVRSPEEMNIQELRRYIEVIASSGDLQGVRRLQVSLSQKYAIPFAC 325 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 +A TLI A ++L R++ + + + F Y ++ + ++ G+ G L P AA +P Sbjct: 326 LAFTLIGAPLALRPQRTSS-SLGLGLSVLIIFAYYVLLFVSQALGQIGTLGPEVAAWLPN 384 Query: 345 ILTISLSILILLQ 357 + ++ + +L + Sbjct: 385 FICSAVGLGLLYR 397 >gi|260771006|ref|ZP_05879935.1| putative membrane protein [Vibrio furnissii CIP 102972] gi|260614243|gb|EEX39433.1| putative membrane protein [Vibrio furnissii CIP 102972] gi|315179054|gb|ADT85968.1| hypothetical permease, YjgP/YjgQ family [Vibrio furnissii NCTC 11218] Length = 356 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 120/358 (33%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT+ L + L +I E ++G+ Y + + + +P Sbjct: 1 MFKILDWYIGRTIIATTMLVLATFVGLSGIIKYVEQLRKVGD-GTYDLMQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L I L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGALAASSELVVMQAAGFSKLDIGLSVLKTAVPLMIIITLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K DL G W + N I L ++W Sbjct: 120 EWGAPQAQKAARDLRAFATSGGKILSVRTGVWARDINDFIFIGKIDDNRLYGMNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + V++ + + + D Sbjct: 180 HKQLRHVIFAKQVDYLGGNSWVMKDVEVTDMND-DVVITKQSLPEYRWETSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + + + + ++ R E F+ I P + M L+A S R Sbjct: 239 TVKPEELALSGLYDYVHYLK-ASEQDASRYELAFWRKITQPFSIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + PV A+ P I+ +S+++L+L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGIPPVFGAVAPSIVFLSIALLLLRRK 355 >gi|300718540|ref|YP_003743343.1| permease [Erwinia billingiae Eb661] gi|299064376|emb|CAX61496.1| putative permease [Erwinia billingiae Eb661] Length = 358 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 129/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + + G+ Y+ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQ-GEYTALGAGLYTVLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + + I F Sbjct: 120 EFVAPQGEQMARNYRAQQLVGGSLLSTQNGLWAKDGDNFIFIEQIKDNSELSGISIYSFN 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + ++ D ++ + ++ + S + D Sbjct: 180 KERRLETVRYAASAKYNVDKKRWDLAEVDQSNLTDPKQVTGSQTLSGEWKTTLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + + +S + R + + I PL + M L+A S Sbjct: 240 VALDPDALSISGLYNYVKYLKQSGQVSS-RYQLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I + P+ AL+P ++S+ +LL++ Sbjct: 299 RSVSMGMRVVTGISFGFIFYVLDQIFGPLSLVYNIPPIMGALLPSGAFFAISVYMLLKR 357 >gi|261211061|ref|ZP_05925350.1| putative membrane protein [Vibrio sp. RC341] gi|260839562|gb|EEX66173.1| putative membrane protein [Vibrio sp. RC341] Length = 356 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIITLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKLARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVDNEQLIGMNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + V L ++V + + D Sbjct: 180 NKKLSTVIFAEEVDYIGNNEWLMKDVHLTRMVN-DIEISKEALPEYRWHTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + ++ R E + + P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLSDYVHYLK-ASEQDASRYELALWRKVTQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y L P+ A+ P ++ +++++ +L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGLPPLFGAIAPSLVFLTIALGLLGRK 355 >gi|271498969|ref|YP_003331994.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] gi|270342524|gb|ACZ75289.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] Length = 356 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 139/362 (38%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T + L + L +I + ++G+ YS+ + VP Sbjct: 1 MFRVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GGYSVMGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +GE++ + Q G + W + N I + ++ + Sbjct: 120 EWVAPAGEQMARNYRSQMMYGGSMLSTQSGLWAKDGNDFVYIQR-----VAGDNELQGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDG 236 DK +K++ + A A+ N KL +V E S + D Sbjct: 175 LYHFDKHSKLLSVRYAASAVYENGSWKLSQVEESDLNDSKQIGGSQTVSGEWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + + + +S R + + + PL + M L+A S Sbjct: 235 LGVVALDPDALSIRGLYDYIKYLRQSGQ-EANRYQLNMWSKLFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + + GI GF+ Y + I + PV AL+P L + +S+++LL Sbjct: 294 GPLRSVPAGMRIVIGISFGFLFYVLDQIFGPLSLVYHMPPVLGALLPSALFLFISVMLLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|319898730|ref|YP_004158823.1| hypothetical protein BARCL_0559 [Bartonella clarridgeiae 73] gi|319402694|emb|CBI76240.1| conserved membrane protein of unknown function [Bartonella clarridgeiae 73] Length = 363 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 117/360 (32%), Positives = 191/360 (53%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF YLK YFLLG IL +ID E +++ LP+Y++ +++ R+P I+ Sbjct: 5 TLGRYFFVLYLKKICYFLLGVFILTLLIDFTENSSRLELLPHYTVKGAFLISLLRIPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+ PFI L + + +LN+ ELV++R+IGIS WQ L P G+ LLG+F++L +NP+ Sbjct: 65 QQLFPFIALFSAMTMLISLNQKLELVVARSIGISAWQFLMPACFGAFLLGLFSILFVNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDI--IPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A +I W+ N + + IPW+ IGAK I + D Sbjct: 125 AAWSSSQAEKMIAAWRSNNIEISTSNTRIPWLTQQTNLGRTTIGAKSITHQGLSLIDAIF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ + + + A + N L Y+ G+ P L +K + + Sbjct: 185 VQYNENATVKNWINTKKATLTNGAWLLTNGTIYKIGQTPEKFTELRLKTHLKPEFLTEHL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + FY++ +K++ + + + + LI P++LVAMTLIAA+VSL+F+R Sbjct: 245 ADPVTIPFYKLPEKIAVARSFG-YSANKFDMHLQSLIASPILLVAMTLIAATVSLKFTRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q R ++ G+ +GF+LY I +++SFG +G + P+ AA +PV++ +S I LL EDG Sbjct: 304 GQSRTLILGGVIAGFILYVISVLVRSFGNAGYIPPIIAAWVPVVVALSFGISFLLHTEDG 363 >gi|110634109|ref|YP_674317.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285093|gb|ABG63152.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 359 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 113/358 (31%), Positives = 176/358 (49%), Gaps = 3/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF+ Y T + +G LV+++ EI + G+L ++ S LAA ++P+I+ Sbjct: 5 TLGRYFFRRYAVITAWNFIGVAALVYIVTFTEITGRAGDLEGFTTSWALGLAALQLPIIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ +PFI LV I +LNR ELVI+RA GIS WQ L P G+ + G+ TVLV+NPI Sbjct: 65 QQAVPFIGLVAAIATLISLNRKYELVIARAAGISAWQFLTPIAFGAFVFGLLTVLVLNPI 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A L + D + W++ Q + IGA L Sbjct: 125 AARAFASAQMLEATVR-GADTSNNAKERWIKQRTDQGETIIGADAALAGGTELVRPVFFI 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 I I R DA A + + +L VV Q G P + + +K + + Sbjct: 184 IGDDR-IAERLDAASAFLRDGYWELVDVVRRQGGNAPEKIATARVPTNLKPEFVGQELTD 242 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + + + ++ + N Q + LI +P +LVAMTLIAA+VS+ F+R Q Sbjct: 243 PDAVSIFALPGMIETAHSFGLRANA-FAMQLHSLITLPPLLVAMTLIAATVSMRFTRMGQ 301 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 ++ G+ +GF+LY ++++FG +G + P AA PV++ + + LL +EDG Sbjct: 302 SATVILGGVVAGFLLYVSSVLVRAFGDAGFVPPPIAAWTPVMVAMFFGVTFLLFREDG 359 >gi|320539288|ref|ZP_08038958.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] gi|320030680|gb|EFW12689.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] Length = 356 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 135/362 (37%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ +Y++ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRRVGQ-GDYTVLGAGMFTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGQLATRSELVVMQASGFTRMQIAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A G+++ D Q G + W + N I + Sbjct: 120 EWVAPQGDQMAHDFRAQQMYGGSLLSTKSGLWAKDGNDFIYIER-----VSGEKELAGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + + ++ + A A + KL +V + + T + + Sbjct: 175 IYHFNDRRRLETVRYAATASFEDGVWKLSQVDTSDLTNEELVTGTQTLTGEWKTNLTPEK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S R + + I PL + M L+A S Sbjct: 235 LGVVALDPTSLSIKGLHNYVKYLKQSGQ-EANRYQLNMWNKIFSPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS I V GI GF+ Y + I + PV AL+P ++ + +S+ +LL Sbjct: 294 GPLRSVPMGIRVVTGISFGFLFYVLDQIFGQLSLVYNMPPVLGALLPSMMFLLISMYMLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|21674368|ref|NP_662433.1| hypothetical protein CT1549 [Chlorobium tepidum TLS] gi|21647546|gb|AAM72775.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 384 Score = 147 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 132/352 (37%), Gaps = 3/352 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +L L+ L L +I+L E ++ + + S R + + +P Sbjct: 29 IIDRYIARQFLTIFLFALASFAALFILINLVENLDRFLDR-HISFGRILIYYLSGLPDTF 87 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ V L+ SEL ++ G+S+ +L+ PF++ ++ + + I Sbjct: 88 LLTSPLSVLLASLFVTGKLSMQSELPALKSAGMSLSRLMKPFLLVTMAIAALNTINSCFI 147 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + +++ + + + +N + + + + + Sbjct: 148 APAMYDWSKGFEKRYLKKQQDNGEEPLHIRESNNRILTVAKIGPDKKSATTVSLETFNGS 207 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFSE 242 Y K+ + + + + TL + + + F+ Sbjct: 208 QIVSRIDADSLRIITRHKYWIFYNTKQRTFSKGAETLVTRAGADTLKLSLAPNTFKMIDT 267 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + I + +S + RA + + + +PL + + LI +S + RS Sbjct: 268 DPDEMNIVQHIDFIWQKARSGLPGLERATVKLHTKLALPLASMIIVLIGVPLSSKKKRSG 327 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + ++ + G + ++ + S G G+L PV AA +P IL I + Sbjct: 328 -LAVEISISLLIGLLYLGMLKTIGSLGYDGLLNPVLAAWLPDILFIIAGTFL 378 >gi|294102483|ref|YP_003554341.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] gi|293617463|gb|ADE57617.1| permease YjgP/YjgQ family protein [Aminobacterium colombiense DSM 12261] Length = 365 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 140/363 (38%), Gaps = 7/363 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GIL R+ +K + ++ ++ ++ DL M SI L +P + Sbjct: 5 GILDRFIWKEMAGSFVFGVMAFTMVFVAGDLLFQIASMIIEKGISIGVVLRLFIYSLPEV 64 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F L+ SE+V +A GIS ++L P +VGS+L+G+ +++ Sbjct: 65 IILTLPMACLLSALLTFGKLSTNSEIVALKASGISFQRILKPVIVGSLLVGLSALILNET 124 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + +L++ +++ + Q + + L + Sbjct: 125 VVPFSNRAAENLMRFEVMREKPSVLKEQVFLRDESNGQLNRVIYIEKLQPRKGTMTNVLV 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR-----IPIDKNSTTLNIPIKMDGF 237 +K K+ + + K + +Q + ++ + Sbjct: 185 QEFEKGKLKRITVGKTGLWKDGKWWIDDGEVFQVTNGGKVELLFRFERQQFDLNLSPQQV 244 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 ++ S + + S E++ ++ F+ +P V + ++ AS+ + Sbjct: 245 EQASRKPSEMSALELMAQIRLLQAQGGNLAPLW-VLFHLRFAVPWASVVLAILGASLGVR 303 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ + + F+ Y ++++ K+FG++ + P+ AA +P +L + + + Sbjct: 304 SHRTGS-GVGFGLSVMIVFVYYVVMSLCKAFGETEHMPPLLAAWVPNVLFLLVGGYFARK 362 Query: 358 KED 360 D Sbjct: 363 AND 365 >gi|261342655|ref|ZP_05970513.1| membrane protein, YjgP/YjgQ family [Enterobacter cancerogenus ATCC 35316] gi|288315303|gb|EFC54241.1| membrane protein, YjgP/YjgQ family [Enterobacter cancerogenus ATCC 35316] Length = 360 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY + T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGRTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDAMGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F + Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDDELGGVSIYAFNN 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST-TLNIPIKMDGFQKF 240 + + D ++ + +I + T T + D Sbjct: 183 ERRLQSVRHASSAKFDAEHKQWRLSQVDESNLTDPKQITGTQTVTGTWKTDLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P + +S+ +LL++ Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFLLISLWMLLRR 359 >gi|329850878|ref|ZP_08265723.1| hypothetical protein ABI_37970 [Asticcacaulis biprosthecum C19] gi|328841193|gb|EGF90764.1| hypothetical protein ABI_37970 [Asticcacaulis biprosthecum C19] Length = 380 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 148/361 (40%), Gaps = 5/361 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y + + L+ L+ +I+ EI + + V+ R P I Sbjct: 21 LETYILQTCVAMFASALMVVSALILLINYVEISRSVAARADLGGLEVLVMLFQRSPSAIL 80 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++PF L ++ F NLNR SEL+ RA G+S W+ + P V + GI T+ V+NP+A Sbjct: 81 ILLPFAFLFGSLFAFVNLNRRSELIAMRAAGVSAWRFVLPATVSAFAFGILTIGVLNPVA 140 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + ++ I Q + +Q + + + T Sbjct: 141 SHLQDVYERKVVAAEAFAPTDPAEAIYLRQGDSDRQVVIRADGQASAQIGHLRGVTFWIF 200 Query: 185 DKKNK----IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + I R DA AI+ +LK EY + N TL+ + K Sbjct: 201 TTDRRGAPSFIERVDAREAILRPGSWQLKDAREYTLDKPAQFYNVLTLSSNLDPQKAFKR 260 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S F+ + + + S F E + + L+ PLM AMT + A SL R Sbjct: 261 YASTQSVPFWRLPGLIRQNQISG-FSTTSYELKLHQLLSTPLMFAAMTALGAVFSLRLMR 319 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 I+V G+ GF+++ + + S GK+ ++ A P +L + ++ +L+ ED Sbjct: 320 LGGLTILVTSGVSLGFVIFFVNQLFASMGKADVIPAALAGWSPAVLAMLGAMTLLVYTED 379 Query: 361 G 361 G Sbjct: 380 G 380 >gi|152985629|ref|YP_001346669.1| hypothetical protein PSPA7_1284 [Pseudomonas aeruginosa PA7] gi|150960787|gb|ABR82812.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 355 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 116/362 (32%), Gaps = 14/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY L L + L + + N + +Y I A P Sbjct: 1 MVK-LDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDIS--ASYGIGEALRFIALTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++P L+ +V L SEL I RA G+S+ +++ + ++L + +LV Sbjct: 58 RRAYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E I + GD Q S W + + N + T Sbjct: 118 EYVAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGR-----EYIHINAVQPNGVLYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-----MD 235 D++ + A A D +L+ V L Sbjct: 173 RYRFDEQRGLQSASFAKRARFETDHWQLEDVTTTLLHPQEKRSEVVKLPTERWDAQLSPQ 232 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S + + + + +N R F+ ++ PL+ A+ L+A S Sbjct: 233 LLNTVVMEPEALSISGLWQYIHYLADQG-LNNNRYWLAFWTKVLQPLVTAALVLMAISFI 291 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + G+ GF+ ++ P+ A +IP + +L Sbjct: 292 FGPLRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASACALAGLWLL 351 Query: 356 LQ 357 + Sbjct: 352 RR 353 >gi|83594405|ref|YP_428157.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577319|gb|ABC23870.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 366 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 88/363 (24%), Positives = 159/363 (43%), Gaps = 7/363 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + YL + L L+ + D+ EI + G I +A +P+ + Sbjct: 6 TLTTYIARTYLTALVGATLVVGALLMLFDVIEITRRSGSKA-IGIDVVLEMALYHLPMSL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q +PF+ + +++F+ L R+SELV+ RA G+S+WQ L P + ++LGI V ++NP+ Sbjct: 65 QSALPFVFMGGAVMIFWKLARSSELVVIRAAGLSVWQFLAPVIAVVVVLGIANVTLLNPL 124 Query: 124 ATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDF 179 A + SD W++ +NP+ + + A+ + ++ Sbjct: 125 AAHLYTKYERMDAGMDSGVANPLALSDGGLWLRENNPEGQVVMHAQGVRQVDNALRMTGV 184 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T + R DA+ A + + L VV GR+ + + + + Q Sbjct: 185 TIFRYGPDRRFESRIDAETAGLREGALVLTSVVTTYPGRVGERAETLEVPSNLTLPKIQD 244 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + SF+E+ ++F + F + ++ LI PL+L+AM L+ A SL+ S Sbjct: 245 SFSPPETVSFWELPAFITFFEAAG-FSAHAHRLHWHSLIASPLLLIAMVLMGAVFSLKPS 303 Query: 300 -RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + + +GF ++ I + G S L AA P ++T +++ L Sbjct: 304 QRSVNWLFRIVGAVAAGFGVFFFSKITYTLGLSQTLPVNLAAWSPALVTTMVALAALFHL 363 Query: 359 EDG 361 EDG Sbjct: 364 EDG 366 >gi|119383652|ref|YP_914708.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] gi|119373419|gb|ABL69012.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] Length = 373 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 81/374 (21%), Positives = 151/374 (40%), Gaps = 18/374 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL Y + +L+ + ++F+ID+ E + + N +S A L+ + Sbjct: 2 ILSTYVARRFLRMLVMIAAIFGAILFLIDIVEQIRRFSD-ENIGLSGAAGLSLLNITASF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P IT++ I +F NL+R+SELV RA G S ++L V + L G+ V V+NP+ Sbjct: 61 YSILPLITVLAGIALFLNLSRSSELVAIRASGRSGIRVLAAPAVTAALAGMLAVAVLNPV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQI---------SNPQQDIFIGAKKILPE 172 + K D + Q + G + D W++ + I A + P+ Sbjct: 121 VAATTKRYDDAVAQMRSGGGQTVSVGDNAVWLRQALPTRNGNGDETSGQVVIRASRASPD 180 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-----NSTT 227 D T + R DA A + +L + E+ + + Sbjct: 181 ATTLYDATFMVFAPDTGPTRRIDAATARLTQGAWELTDIKEWPLTQPNPETMARTAPRLE 240 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM 287 L + + + + +++ + ++ F R + F + PL+L AM Sbjct: 241 LPTDLTAARIRDSFGRPEAIPVWQLPAFIKGLERAG-FSAQRHKVWFQMELARPLLLAAM 299 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 IAA ++ R + ++V G L+ + + + G +G + P A P I+ Sbjct: 300 IAIAAVFTMRHMRGRRMGLLVLGAFGCGIGLFFLRNLAQVLGDNGGIPPALAGWAPPIVA 359 Query: 348 ISLSILILLQKEDG 361 + ++ LL+ EDG Sbjct: 360 LLFALGALLRLEDG 373 >gi|260772183|ref|ZP_05881100.1| putative membrane protein [Vibrio metschnikovii CIP 69.14] gi|260613050|gb|EEX38252.1| putative membrane protein [Vibrio metschnikovii CIP 69.14] Length = 356 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++G+ +Y + + VP Sbjct: 1 MFKILDWYIGRTIIATTTLVLVTFVGLSGIIKYVEQLRKVGD-GSYDLLQALFFVLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALAASSELVVMQASGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G+ W + +N + + L ++W Sbjct: 120 EWGAPQAQKMARDMRAFATSGGNILSVRTGVWARDANDFIFVAKIDNERLYGLNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +V++ + + + + D Sbjct: 180 QKQLRHVVFAEQVDYLGDNHWLMKQVQITDLQD-NVVLTKQYLDVYQWRTALAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + + + + ++ R E + + P + M L+A S R Sbjct: 239 TVKPEELALSGLYDYVHYLK-ASEQDASRYELALWRKLTQPFSIGVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y P A+ P ++ +++++++L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPLSLVYGFPPAFGAIAPSLVFLTIAVMLLRRK 355 >gi|197105169|ref|YP_002130546.1| hypothetical protein PHZ_c1706 [Phenylobacterium zucineum HLK1] gi|196478589|gb|ACG78117.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 367 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 81/364 (22%), Positives = 143/364 (39%), Gaps = 6/364 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G L RY L L ++ +I E+ +Q+G + S L R P + Sbjct: 5 GRLERYVMGRMLAGVGAALAVISAVILLIQFVELSSQVGTRADVGASGIFALTLLRAPSL 64 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 IQ ++PF L I F LNR SELV RA G+S W+ + P + +LG+ V V+NP Sbjct: 65 IQILLPFCFLFGGIGAFVGLNRKSELVAMRAAGVSAWRFILPSAALAAILGVLAVAVLNP 124 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE-----NHIWE 177 A + + +N + + Q Q + + + Sbjct: 125 FAAALNARFEAERARLMENYLGDRPQDVWIRQGDERTQIVIHAKDRETVAGAVVLKGVSV 184 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 T + R +A A + +L+ V E G I S ++ + + Sbjct: 185 FIYEKTPRGAPEFRRRLEAAEARLMPGFWRLRDVREAGVGESSIRSESLSIRSTLDAEAA 244 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + +F+ + + + ++ F +F L+ P++ AMT++AA+ SL Sbjct: 245 MERFASPEAIAFWRLPAAIRLTEQAG-FSAAGYRLRFQQLLATPVLFAAMTVLAAAFSLR 303 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ GF+++ + K+ IL AAA P ++ + + +L Sbjct: 304 LVRLGGLAGLAGAGVALGFVMFFFNQFAGALAKADILPLFAAAWAPTLVALLAGVTLLCY 363 Query: 358 KEDG 361 EDG Sbjct: 364 TEDG 367 >gi|84387841|ref|ZP_00990856.1| hypothetical protein V12B01_07608 [Vibrio splendidus 12B01] gi|84377356|gb|EAP94224.1| hypothetical protein V12B01_07608 [Vibrio splendidus 12B01] Length = 356 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++G Y + + VP Sbjct: 1 MFKILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVG-RGTYDLLQALYFVLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMIVVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G+ + W + +N + + L ++W Sbjct: 120 QWGAPQAQKMARDLRTISIAGGNIISTQSGVWARDANDFIFVVKIDDEKLYGLNMWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + + V++ + + + + D Sbjct: 180 NKALKTAIYSEEVDYVGDNVWTMNDVEITSFEN-EIQITKESLPTYSWKTSLAPDKLAIV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +S+ ++ R E + I P+ + M L+A S R Sbjct: 239 TVKPEELSLSGLYDYVSYLK-ASEQDASRYELALWRKITQPISIAVMMLMALSFIFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + P AL P ++ + ++I++L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPVSLVYQIPPAFGALAPSVVFLGIAIMLLRRK 355 >gi|327396303|dbj|BAK13725.1| inner membrane protein YjgQ [Pantoea ananatis AJ13355] Length = 358 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 126/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T L L + L +I + + G+ YS VP Sbjct: 1 MFRVLDRYIGKTIFNTILMTLFMLVSLSGIIKFVDQLRKTGQ-GAYSALDAGYYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + N I + +FT Sbjct: 120 EFVAPQGEQMARNFRAQQLYGGALVSTQSGLWAKDGNNFIYIERVKGDDEIDGVSIYNFT 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST-TLNIPIKMDGFQK 239 + + + ++ + +I ++ T + D Sbjct: 180 DDRRLQSVRYAATAKWNKDKKLWVLSQVDESNLTDPKQITGSQSLTGEWKTSLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +S R + I PL + M L+A S Sbjct: 240 VALDPDALSITGLYDYSKYLKQSGQESG-RYRLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I L P+ A++P ++S+ +L+++ Sbjct: 299 RSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPIFGAILPSFAFFAISLFMLIKR 357 >gi|52425603|ref|YP_088740.1| hypothetical protein MS1548 [Mannheimia succiniciproducens MBEL55E] gi|52307655|gb|AAU38155.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 356 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 136/363 (37%), Gaps = 10/363 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L LL + L +I E +G+ +Y + + +P Sbjct: 1 MMNTLDRYIGKSILGAIFATLLTLVGLSGIIKFVEQFRSVGK-GSYDSMQAFLYTVLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELV+ ++ G S ++ + ++ L + T+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVVMQSAGFSRMKIGFAVMKTALPLVLLTMVIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + N I K E+ + Sbjct: 120 EWGIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNDFIYI-----KRATEDANLNNIY 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 + + ++ A+ A N LK+V E Q I + + D Sbjct: 175 IYSFNDNRQLQRVSHANKASYENGSWVLKQVNESQISADEIKTKNYLNRPWKTSLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 F+ + S S + +SF ++ + + E ++ + P+ + M ++A S Sbjct: 235 GIFTVKPTSLSISGLSSYISFLKETGQ-DSKKFELTYWRKLFQPISVGVMMMLALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + GI GF+ Y I I + P+ AL+P +L + ++ +L + Sbjct: 294 PLRSVTAGARIVTGICFGFVFYVINEIFGPLSLVYNVAPIIGALMPSLLFLVITWWLLSR 353 Query: 358 KED 360 K D Sbjct: 354 KRD 356 >gi|269792897|ref|YP_003317801.1| permease YjgP/YjgQ family protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100532|gb|ACZ19519.1| permease YjgP/YjgQ family protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 356 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 129/354 (36%), Gaps = 6/354 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 L + + +L+ L + S+ L +P ++ IP Sbjct: 2 ILMELLGPFAFGVAAFTVLMVAGSLLFRIADLVIQRGVSLGVVVRLFLYYLPGVVVTTIP 61 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 +L+ ++ F L+ SE+V +A G+ +++ P VV S L + T ++ + E Sbjct: 62 MGSLLGALMGFGKLSSHSEIVALKACGVPFRRMVRPLVVASALASVVTFVLNETVVPLSE 121 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + +++ + +++ + + + + + Sbjct: 122 RAARNVLAYEIMRERPPEFKERMFLREEGSSGLRRVIYMDRIRPRTGEMEGVLVQEFEGG 181 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP-----IDKNSTTLNIPIKMDGFQKFSEQ 243 ++ A A+ + K +++ ++ +L + + + S Sbjct: 182 RLSRLTSARRAVWRDGKWTMEEGKTFEVAPDGGVKFLYSFARESLRLDLSPARVEAQSTD 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S +++ +++ + + F+ + +P + + L+ AS + RS Sbjct: 242 PSQMSVFQMAEQIGLMERQGS-DATKLRVMFHLRLAVPWASLVLALVGASAGVRPQRSGG 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + F+ Y +++ +S G++ L PV AA +P ++ + ++ + Sbjct: 301 AGVGLGLSVVIVFLYYVVLSFCQSLGEASYLPPVVAAWVPNLVFGVAGLFMVRR 354 >gi|49475338|ref|YP_033379.1| hypothetical protein BH05440 [Bartonella henselae str. Houston-1] gi|49238144|emb|CAF27352.1| Hypothetical transmembrane protein [Bartonella henselae str. Houston-1] Length = 365 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 5/362 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L +YFF YLK T YFL G +L +ID E ++ LP Y+ +++ R+P I+ Sbjct: 5 TLGQYFFIRYLKMTCYFLGGIFVLALLIDFTENSGRLSSLPRYTAKDAFLISVLRIPFIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+IPFI L + + +LNR SELV++R+IGIS WQ L P G+ L G+F++L++NP+ Sbjct: 65 QQLIPFIALFSAMAMLISLNRKSELVVTRSIGISAWQFLMPACFGAFLFGLFSILLVNPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ----KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 A G ++ +W+ + + I W+ IGAK I + D Sbjct: 125 AAWGFSQAERMMTEWRSKNNNVLTSLHNTRILWLTQRTHSGRTTIGAKSITDQGLSLIDA 184 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T + + I + ++ A + N L Y+ G P + + +K + + Sbjct: 185 TFVQYNDNATIKNWINSRKATLINGAWLLTDGTIYKIGHPPEKFSELQIQTTLKPEFLTE 244 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A+ FY++ K+ + + + LI +P +L+AMTLIAA VSL F+ Sbjct: 245 RLVNPATIPFYQLPTKIMIARSFG-YSANNFDMYLQSLIALPALLIAMTLIAAVVSLNFT 303 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R Q +I++ G+ +GF LY I ++++FG +G + P+ AA PV + + L I LL KE Sbjct: 304 RFGQSKILILGGVIAGFSLYVISILVQAFGNAGYIPPIIAAWTPVFIALFLGISFLLHKE 363 Query: 360 DG 361 DG Sbjct: 364 DG 365 >gi|149190545|ref|ZP_01868815.1| predicted permease [Vibrio shilonii AK1] gi|148835669|gb|EDL52636.1| predicted permease [Vibrio shilonii AK1] Length = 356 Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y K + T + L + L VI E +GE +Y++ +P Sbjct: 1 MFRILDVYVGKTIITTIILVLSVFVGLSAVIKFVEQLRSVGE-GSYTMLSALYFVILGMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ L+ ++V L +SELV+ +A GIS ++ + ++ L + + + Sbjct: 60 RDIELFFSMAALLGSLVGLGMLASSSELVVMQAAGISKLRIGLSVLKTAVPLMVVVMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A + +++ DL Q G W + +N I + + +IW Sbjct: 120 EWGAPTTQQMARDLRLQATSGGSIVSVRNGVWARDANDFIFISKVNGESVEGLNIWRFGE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + ++++ + + + D Sbjct: 180 NKQLKETVFAESADYLGDNRWEMHRIQITDMKN-DEALSKETLDKQVWETSLVPDKLAIV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + S R E F+ P+ + M L+A S R Sbjct: 239 TVDLNELPLSGLWDYTQYLKDS-EQDASRYELAFWRKATQPISVAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + P+ AL P ++ +++++L+L +K Sbjct: 298 SVTMGARILSGVIAGFTFYISSEFFGPVSLVYGMSPLFGALGPSLVFLTIAMLLLRRK 355 >gi|146283385|ref|YP_001173538.1| permease [Pseudomonas stutzeri A1501] gi|145571590|gb|ABP80696.1| predicted permease [Pseudomonas stutzeri A1501] Length = 353 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 129/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L + L + + + +Y + P Sbjct: 1 MVK-LDRYIGIHVFLAILMVLGIIVGLALLFAFIDELGDV--QGSYGLGDALQYVLLTSP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ L +SEL I RA G+S+ +++ + ++L + +L+ Sbjct: 58 RRLYEMLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVLSVMKPMLVLLVAGILIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E I + G+ Q S W + N + + + T Sbjct: 118 EYVAPLSEDIAQARRSLAQGAGEAQSSKRGLWHRQENEFVHV-----NAVQPGGVLVGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D++ +++ A A D +L+ + + + ++ + Sbjct: 173 RYRFDEERRLLSSSFARRASYQGDHWRLENIATTHFRGDHTEVMRAPEERWDVQLTPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S + + + + + +N R F+ ++ P + VA+ L+A S Sbjct: 233 GTVVMEPEALSITGLWRYIHYLGEQG-LNNSRYWLAFWTKVLQPAVTVALVLLAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + G+ GF+ I ++ + P+ A ++P + + +L + Sbjct: 292 PLRSVTLGQRIFTGVVVGFVFRIIQDLLGPASQVFGFSPLLAVVLPACVCALIGAWLLRR 351 >gi|37528300|ref|NP_931645.1| hypothetical protein plu4479 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787738|emb|CAE16851.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 359 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 78/362 (21%), Positives = 141/362 (38%), Gaps = 9/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L+T L L + L +I E ++G+ Y+ + VP Sbjct: 1 MFGVLDRYIGRTILQTILMTLFMLVSLSGIIKFVEQLRKVGQ-GEYTTISAGLYVLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IQ P L+ ++ L SELV+ +A G + Q+ + +I L I T+++ Sbjct: 60 KDIQIFFPMAALLGALLGLGTLATRSELVVMQASGFTRMQIAGSVMKTAIPLVILTMVIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G ++ W D + + + Sbjct: 120 EWVAPQGEQMARNYRAQKMLGGSLVSTNKGMWTID---GDDFIYIQRIVSDTEIKGVNIY 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDG 236 DKK + + + ND KL +V E S ++ K + Sbjct: 177 HFNDDKKLLSVKYAASAVYDKDNDLWKLSQVEESDLTDSKKITGSQRISADWKILLTPEQ 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + S + + + + +S R + + I PL + M L+A S Sbjct: 237 LNVVALEPEALSISGLYQYIKYLKQSEQESG-RYQLNMWKKIFAPLSVAVMMLMALSFIF 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + + GI GF+ Y + I + V AAL+P +L +++SI +LL Sbjct: 296 GPLRSVPMGVRIVTGISFGFLFYVLNEIFGPLSLVYSVPAVLAALLPSLLFLTVSIYLLL 355 Query: 357 QK 358 ++ Sbjct: 356 KR 357 >gi|317046772|ref|YP_004114420.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] gi|316948389|gb|ADU67864.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] Length = 358 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 126/363 (34%), Gaps = 11/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T + L + L +I + + G+ Y+ VP Sbjct: 1 MFKVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKTGQ-GAYTALDAGYYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGNLAQRSELVVMQASGFTRMQVALAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + N I + +F+ Sbjct: 120 EFVAPQGEQMARNYRAQQLYGGALVSTQNGLWAKDGNSFIYIERIKGDNQIDGVSIYNFS 179 Query: 181 SITIDKKNKI-----IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + D+ LK + + S + D Sbjct: 180 EQRRLLSVRYAATATWDNAKKLWVLSQVDESDLKDAKQITGSQSL----SGEWKTNLTPD 235 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S + + +S R + + I PL + M L+A S Sbjct: 236 KLGVVALDPDALSIRGLYNYSKYLKQSGQ-EAGRYQLNMWSKIFQPLSVAVMMLMALSFI 294 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + V GI GF+ Y + I + P+ A++P ++S+ ++ Sbjct: 295 FGPLRSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGIPPILGAVLPSAAFFAISLFLM 354 Query: 356 LQK 358 L++ Sbjct: 355 LKR 357 >gi|15599022|ref|NP_252516.1| hypothetical protein PA3827 [Pseudomonas aeruginosa PAO1] gi|116051855|ref|YP_789302.1| hypothetical protein PA14_14510 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889889|ref|YP_002438753.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254236731|ref|ZP_04930054.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296387657|ref|ZP_06877132.1| putative permease [Pseudomonas aeruginosa PAb1] gi|313109246|ref|ZP_07795214.1| hypothetical protein PA39016_001710055 [Pseudomonas aeruginosa 39016] gi|9950002|gb|AAG07214.1|AE004800_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587076|gb|ABJ13091.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126168662|gb|EAZ54173.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218770112|emb|CAW25874.1| putative permease [Pseudomonas aeruginosa LESB58] gi|310881716|gb|EFQ40310.1| hypothetical protein PA39016_001710055 [Pseudomonas aeruginosa 39016] Length = 355 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 14/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY L L + L + + N + +Y I P Sbjct: 1 MVK-LDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDIS--ASYGIGDALRFIFLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++P L+ +V L SEL I RA G+S+ +++ + ++L + +LV Sbjct: 58 RRAYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E I + GD Q S W + + N + T Sbjct: 118 EYVAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGR-----EYIHINAVQPNGVLYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-----MD 235 D++ + A A D +L++V L Sbjct: 173 RYRFDEQRGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSEVVKLPTERWDAQLSPQ 232 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S + + + + +N R F+ ++ PL+ A+ L+A S Sbjct: 233 LLNTVVMEPEALSISGLWQYIHYLADQG-LNNNRYWLAFWTKVLQPLVTAALVLMAISFI 291 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + G+ GF+ ++ P+ A +IP + + +L Sbjct: 292 FGPLRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWLL 351 Query: 356 LQ 357 + Sbjct: 352 RR 353 >gi|319407067|emb|CBI80704.1| conserved membrane hypothetical protein [Bartonella sp. 1-1C] Length = 363 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 195/360 (54%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF YLKT +FLLG ILV +ID E +++ LP+Y+ +++ R+PLI+ Sbjct: 5 TLGRYFFMLYLKTVCFFLLGVFILVLLIDFTENSSKLAFLPHYTAKGAFLISLLRIPLIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+ PFI L I + +LN+ ELV++R+IGIS WQ L P G+ L G+F++L INP+ Sbjct: 65 QQLFPFIALFSAITMLISLNKKLELVVARSIGISAWQFLAPACFGAFLFGLFSILFINPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A +I +W+ N + IPW+ I +GAK I+ ++ D T Sbjct: 125 AAWSSFQAEKMIAEWRSNNAQTSITGTRIPWLTQHTNLGRITVGAKSIIYQDLSLIDATF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ + + + A + + L Y+ G+ P + +K + ++ Sbjct: 185 VQYNENATVKNWINTKKATLTDGAWLLTNGTIYKIGQTPEKFTELRIKTHLKPEFLTEYL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + FY + KK++ + + + + LI +P++LVAMTLIAA+VSL+ R Sbjct: 245 TDPITIPFYNLPKKIAVARSLG-YSANKFDMHLQSLIALPMLLVAMTLIAATVSLKIPRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q R ++ G+ +GF+LY I +++SFG +G + P+ AA +PVI+ + +I LL EDG Sbjct: 304 GQSRTLILGGVIAGFILYVISMLVRSFGNAGYIPPIIAAWVPVIVALFFAISFLLYTEDG 363 >gi|254467255|ref|ZP_05080666.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] gi|206688163|gb|EDZ48645.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] Length = 367 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 138/340 (40%), Gaps = 12/340 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y+ + +L+ L M LV +IDLNE + E + + L+ +P + Sbjct: 3 LDLYYARRFLQWFLVICAVLMTLVILIDLNEQIRRF-EGAGLGLPQLVGLSLLNIPAALS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +P I ++ IV+F L R+SELV++RAIG S + L V+ + +G+ V ++NPIA Sbjct: 62 EFLPLIMILTTIVLFVGLARSSELVVTRAIGRSGIRALAAPVLAAAGIGVLAVTMLNPIA 121 Query: 125 TSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDFT 180 + DL + + + G S W++ + I AK + D + Sbjct: 122 AATANRYQDLAETYHNGGPSALSLSGEGLWLRQGGARGQSVIHAKGYSGDAADITLHDVS 181 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIKM 234 + R A+ A + L + + L + Sbjct: 182 IHAYSTAGGPVRRIIAESARLDGSNWILTNAKSWPLTAGINPEAGAASHDELQLPTTLTT 241 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 D + + S Y++ + + + F R E ++ + PL L+AM L+ AS Sbjct: 242 DRIRDTLGTASGISIYDLPATIRELSAAG-FTTKRYEVRYQAELARPLFLIAMVLVGASF 300 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 ++ +R + V + GF LY I + G++G + Sbjct: 301 TMRHARFGGTGLAVLMAVLLGFGLYFIRNFAQILGENGQI 340 >gi|254242518|ref|ZP_04935840.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195896|gb|EAZ59959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 355 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 14/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY L L + L + + N + +Y I P Sbjct: 1 MIK-LDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDIS--ASYGIGDALRFIFLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++P L+ +V L SEL I RA G+S+ +++ + ++L + +LV Sbjct: 58 RRAYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E I + GD Q S W + + N + T Sbjct: 118 EYVAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGR-----EYIHINAVQPNGVLYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-----MD 235 D++ + A A D +L++V L Sbjct: 173 RYRFDEQRGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSEVVKLPTERWDAQLSPQ 232 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S + + + + +N R F+ ++ PL+ A+ L+A S Sbjct: 233 LLNTVVMEPEALSISGLWQYIHYLADQG-LNNNRYWLAFWTKVLQPLVTAALVLMAISFI 291 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + G+ GF+ ++ P+ A +IP + + +L Sbjct: 292 FGPLRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWLL 351 Query: 356 LQ 357 + Sbjct: 352 RR 353 >gi|221133511|ref|ZP_03559816.1| predicted permease [Glaciecola sp. HTCC2999] Length = 354 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 133/361 (36%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+ Y + L T L + L +I E ++GE +Y + + +P Sbjct: 1 MFSIIDIYIARTLLSTIFVTLSTLVGLSALIKFVEQLRKVGE-GDYDLIVAGLFVFFSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+Q P TL+ ++ L SEL++ +A G+S W ++ + ++++ +LV Sbjct: 60 RDIEQFFPMATLLGGLIGMGVLASNSELIVMQASGMSKWNIIQSAMKCAVVMVCIILLVG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + E + + G S+ I W + + I + D T Sbjct: 120 EFLTPVSEAKAKQIRTEALSGGQVFTSNKIVWTKDGSDFVSIGNVFNQ-----ENLGDVT 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 + + A A + L+ V I N T + D Sbjct: 175 IYKFNDDLDLTQIIAAKRATFVEESWALQDVHITYINDQRISTNRISLTEWRAALTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + S + + + + ++N + R E + I+ P+ + M L+A S Sbjct: 235 SVATVKPEALSIQGLYEYVGYL-QNNQQDSTRYELAMWRKILQPVSVCVMLLMAFSFVFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + G +GF + + F L P+ A++P L +++L+L + Sbjct: 294 SLRSTTMGSRIIVGTLTGFSFFIANEVFGPFAMVYNLPPMLGAIVPSALFAGVAVLLLRR 353 Query: 358 K 358 + Sbjct: 354 Q 354 >gi|218710647|ref|YP_002418268.1| hypothetical protein VS_2727 [Vibrio splendidus LGP32] gi|218323666|emb|CAV19977.1| hypothetical permease [Vibrio splendidus LGP32] Length = 356 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 127/362 (35%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++G Y + + +P Sbjct: 1 MFKILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVG-RGTYDLLQALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + +I L + L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMVIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G + W + +N I + ++ ++ Sbjct: 120 QWGAPQAQKMARDLRTISVAGGSIISTQSGVWARDANDFIFIVK-----IDDDKLYGLNM 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMDG 236 + K ++ + ++ ++ V + + + + D Sbjct: 175 WRYDENKALKTAIYSKEVDYVGDNVWTMRDVEVTSFENEIQVTKESLPTFSWETSLAPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + +S+ ++ R E + I P+ + M L+A S Sbjct: 235 LAIVTVKPEELSLSGLYDYVSYLK-ASEQDAARYELALWRKITQPISIAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + G+ +GF Y + P A+ P ++ ++I++L Sbjct: 294 GPLRSVTMGARILSGVIAGFTFYISSEFFGPISLVYQIPPAFGAIAPSVVFFGIAIMLLR 353 Query: 357 QK 358 +K Sbjct: 354 RK 355 >gi|242240954|ref|YP_002989135.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] gi|242133011|gb|ACS87313.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] Length = 356 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 76/362 (20%), Positives = 142/362 (39%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T + L + L +I + ++G+ +YS+ + VP Sbjct: 1 MFRVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GSYSVLGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGNLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + N I + + Sbjct: 120 EWLAPPGEQMARNYRSQMMYGGSMLSTQSGLWAKDGNDFVYIQR-----VQGENELVGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDG 236 D ++K++ + A A+ N +L +V E S T++ K D Sbjct: 175 IYHFDNQSKLLSVRYAASAVYENGVWQLSQVEESDLRSNKQISGSQTISGEWKTGLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + +++ +S R + + + PL + M L+A S Sbjct: 235 LGVVALDPDALSIRGLYDYINYLKQS-DQEASRYQLNMWSKLFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + + GI GF+ Y + I + PV AL+P L + +SI++LL Sbjct: 294 GPLRSVPAGVRIVIGISFGFLFYVLDQIFGPLSLVYRIPPVLGALLPSALFLFISIMLLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|78222462|ref|YP_384209.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193717|gb|ABB31484.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 359 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 133/357 (37%), Gaps = 8/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY YL+ L + + VID E + + A ++P Sbjct: 1 MSILTRYIASAYLRVFWLCLASFIAIYLVIDFLEKIGRFLRF-DPQWIHVAQFFLYKIPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I Q+IP L+ ++ L+R SE++ R+ G+S+ ++ P + + +F ++ Sbjct: 60 IATQVIPLAVLMATLLTLGMLSRNSEIIAMRSCGVSLRKISAPILAIACAASLFVIVSNE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + + I + + A+ P++ T Sbjct: 120 LILPKTYSQMRFIEEVLIRKK--SSNTFLRQNNIWHKDNKAILMARAFDPDHQTLRGVTL 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG----RIPIDKNSTTLNIPIKMDGF 237 + + R DA+ + L KV + S +N+ ++++ Sbjct: 178 WSFSEGMTPSRRIDAEQGSWDGGQWTLWKVTVRDFQGGGVANTTQIASMPVNLNLQIEDL 237 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + F ++ + + + R E Q + I +P + M + +L Sbjct: 238 KVVDKYADNMGFLKLREYIQKLK-KGGYETTRYEAQMHSKISLPFASLIMAFLGIPFALR 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 SRS+ + + I GF + I I+ SFG++G+L + +A ++ I + Sbjct: 297 GSRSSGVALGIGASIGFGFAYFIINAILISFGQTGVLPSLVSAWAANVIFALSGIWL 353 >gi|304396397|ref|ZP_07378278.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] gi|304355906|gb|EFM20272.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] Length = 358 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 128/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T + L + L +I + + G+ +YS VP Sbjct: 1 MFRVLDRYIGKTIFNTIMLTLFMLVSLSGIIKFVDQLRKTGQ-GSYSALSAGYYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A SGE++ + Q G + W + N I + +F Sbjct: 120 EFVAPSGEQMARNYRAQQLYGGALVSTQNGLWAKDGNSFIYIERIKGDNEIDGVSIYNFN 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + D ++ + +I ++ S + D Sbjct: 180 DQRRLQSVRYAATATWDKDKKRWLLSQVDESNLTDPKQITGSQSLSGEWKTNLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +S R E + I PL + M L+A S Sbjct: 240 VALDPDALSIRGLHSYSKYLKQSGQ-EAGRYELNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I L P+ A++P ++S+ +L+++ Sbjct: 299 RSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPILGAILPSFAFFAISMFMLIKR 357 >gi|148977743|ref|ZP_01814299.1| hypothetical protein VSWAT3_21150 [Vibrionales bacterium SWAT-3] gi|145962957|gb|EDK28227.1| hypothetical protein VSWAT3_21150 [Vibrionales bacterium SWAT-3] Length = 356 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 129/362 (35%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++G Y + + +P Sbjct: 1 MFKILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVG-RGTYDLLQALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGFSVLKTAIPLMIVVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G+ + W + +N I + ++ ++ Sbjct: 120 QWGAPQAQKMARDLRTISIAGGNIISTQSGVWARDANDFIFIVK-----IDDDKLYGMNM 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMDG 236 + K ++ + ++ +K VV + + T + D Sbjct: 175 WRFDENKALKTAIYSKEVDYVGDNVWTMKDVVVTSFENELQITKENLPTYTWKTSLAPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + +S+ ++ R E + I P+ + M L+A S Sbjct: 235 LAIVTVKPEELSLSGLYDYVSYLK-ASEQDAARYELALWRKITQPISIAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + G+ +GF Y + P L P ++ + +++++L Sbjct: 294 GPLRSVTMGARILSGVIAGFTFYISSEFFGPVSLVYQIPPAFGVLAPSVVFLGIAVMLLR 353 Query: 357 QK 358 +K Sbjct: 354 RK 355 >gi|107103347|ref|ZP_01367265.1| hypothetical protein PaerPA_01004416 [Pseudomonas aeruginosa PACS2] Length = 355 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 117/362 (32%), Gaps = 14/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY L L + L + + N + +Y I P Sbjct: 1 MVK-LDRYIGVTVFVAILAVLGVILGLALLFAFIDELNDIS--ASYGIGDALRFIFLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++P L+ +V L SEL I RA G+S+ +++ + ++L + +LV Sbjct: 58 RRAYDMLPMAALIGCLVGLGTLASNSELTIMRAAGVSLSRIVWAVMKPMLVLMLAGILVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E I + GD Q S W + + N + T Sbjct: 118 EYVAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGR-----EYIHINAVQPNGVLYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-----MD 235 D++ + A A D +L++V L Sbjct: 173 RYRFDEQRGLESASFAKRARFETDHWQLEEVTTTLLHPREKRSEVIKLPTERWDAQLSPQ 232 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S + + + + +N R F+ ++ PL+ A+ L+A S Sbjct: 233 LLNTVVMEPEALSISGLWQYIHYLADQG-LNNNRYWLAFWTKVLQPLVTAALVLMAISFI 291 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + G+ GF+ ++ P+ A +IP + + +L Sbjct: 292 FGPLRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFDFPPLLAVVIPASICALAGVWLL 351 Query: 356 LQ 357 + Sbjct: 352 RR 353 >gi|88810479|ref|ZP_01125736.1| putative permease [Nitrococcus mobilis Nb-231] gi|88792109|gb|EAR23219.1| putative permease [Nitrococcus mobilis Nb-231] Length = 358 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 120/361 (33%), Gaps = 12/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + TL LL + L + + + +Y++ + P Sbjct: 1 MKLIDRYIARNVTAGTLIVLLVIVSLDLLFNFLKESQD-SGQGDYTVWLALLYVLLTTPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q PF TL+ +++ L SELV+ R G+S + P V+ + L + + V Sbjct: 60 SAYQAFPFATLIGSLIGLGGLAARSELVVMRGTGMSALTIARPLVMAGLSLALLAMGVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +++ +L + + W + + + Sbjct: 120 WLAPRTDRLATELQTRAVGGQLSAGGESGFWARDGDR------YVHARQVPEADVLEDLQ 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGF 237 I + ++ H A A L V + + S +K D Sbjct: 174 IYAFQGVRLDHITTAWRAHYEQGVWMLLAPVTTHFAADGSVRVSRAASARYRSELKPDML 233 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + ++ + ++ + R F+ + PL V M L+ + Sbjct: 234 DVVVVEPEVLPITQLWIYTRYLERNG-LDSSRYRLAFWVKVATPLATVTMLLLTVPLVFG 292 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + G+ G + + ++ L P+ +AL P +L + +++ L++ Sbjct: 293 SLRSANMGQRIFIGVLIGIAFFLLNRLLNRAAMVFGLPPLVSALGPTVLFLGIALGSLVR 352 Query: 358 K 358 Sbjct: 353 L 353 >gi|167646491|ref|YP_001684154.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348921|gb|ABZ71656.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 367 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 141/363 (38%), Gaps = 8/363 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY K L + L +LV +I +I +G L + P I Sbjct: 7 IERYVLKKTLGSLAAALAVVSVLVMLIAFVDISKSVGTRAEVGFGELLFLTVLQAPATIL 66 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + PFI L + F LNR SEL+ RA G+S W+ + P V + ++G+ T+ ++NP+ Sbjct: 67 LLTPFIFLFGTLGAFVGLNRRSELIAMRAAGVSAWRFIMPAAVAAFVMGLLTLTLLNPLT 126 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE------D 178 + +N K W++ + + + I A+ N Sbjct: 127 AAMSAQFETSRNAMMENYLKSAPK-GLWLRQGDDKTQVVIRARARDQINGAVRLRGVSLF 185 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 ++ + + R +AD A + +L V G I + TL + Sbjct: 186 VYAVQPNGALQFSQRIEADEARLEPGFWQLSGVRVAMPGAGAIRSETYTLPSNLDDRTAS 245 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + + + + + + + + ++ PL+ AM+++AA+ SL Sbjct: 246 ERFSNPQAIAVWRLPETIKRTEAAGFSSIP-FRLRLQQVLATPLLFAAMSVLAAAFSLRL 304 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + G+ GF + + + GK+ +L P AA P I+ + + +L Sbjct: 305 MRLGGLAGLAGAGVTLGFAFFFFNELCGALGKADVLTPAMAAWTPPIVALLAGLTLLCYT 364 Query: 359 EDG 361 EDG Sbjct: 365 EDG 367 >gi|54307699|ref|YP_128719.1| putative permease [Photobacterium profundum SS9] gi|46912122|emb|CAG18917.1| putative permease [Photobacterium profundum SS9] Length = 356 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 125/361 (34%), Gaps = 9/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E ++G+ Y + + + +P Sbjct: 1 MFKILDWYIGRTIIATTALTLSTLVGLSAIIKYVEQLRKIGD-GTYDLWKALIYVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + ++ L + +++ Sbjct: 60 RDIEMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMVLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K +L W G+ W + FI ++ ++ + Sbjct: 120 QWGAPQAQKSARELRAIWTSGGNILSVQSGVW----AKDGNDFIYIGRVHEQSTLNAVNI 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGF 237 DK + L V + + ++ + D Sbjct: 176 WQFDDKNTLSKMVFAKSASFTEQQGWLLADVTVTNISKIQQTNTKFDTLPWKTSLSPDKL 235 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + +S+ +S R E F+ ++ P+ + M L+A S Sbjct: 236 AIVMVKPEELALSGVYDYVSYLKES-KQDASRYELAFWRKLLQPISIAVMMLLALSFVFG 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF Y + L P AL P I+ + ++I +L + Sbjct: 295 PLRSVTMGARVLSGVIFGFTFYISNEVFGPMSLVYRLHPAIGALGPSIVFLFITIYLLRR 354 Query: 358 K 358 K Sbjct: 355 K 355 >gi|121601841|ref|YP_988822.1| YjgP/YjgQ permease [Bartonella bacilliformis KC583] gi|120614018|gb|ABM44619.1| putative permease, YjgP/YjgQ family [Bartonella bacilliformis KC583] Length = 363 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 126/360 (35%), Positives = 193/360 (53%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RYFF YL+ T YFLLGA IL F+ID E +++ LP+Y+ +++ R+PLI+ Sbjct: 5 ILGRYFFIQYLRITCYFLLGAFILAFLIDFIENSSRLTSLPHYTTKGALLISFLRIPLIM 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+ PFI L I + +LNR ELVI+R+IG+S WQ L P G+ LG+ + + NP Sbjct: 65 QQLFPFIALFSAITMLISLNRKFELVIARSIGVSAWQFLMPACFGAFFLGLVAIFLFNPF 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDI--IPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A G +I +W N + + IPW IGAK I E + Sbjct: 125 AAWGYSQAEKIIAEWHSNNVQTSLNNHRIPWFTQHTDLGTTTIGAKSITDEGLSLINAIF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I + A A + N L Y+ G IP + +K + ++ Sbjct: 185 VQYNEDATIKNWIHAQKATLTNSAWFLTHGTIYKTGHIPEKFAEFWIETNLKPEFLTEYL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A+ SFY++ KK++ + + + + LI +P +LVAMTLIAA+VSL+F+R Sbjct: 245 ADPATTSFYKLPKKIAVARSFG-YSANKFDMYLQSLIALPALLVAMTLIAATVSLKFTRL 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY I ++++FG +G + P+ AA +PVI+ + L I LL KEDG Sbjct: 304 EQSGKLILSGVIAGFVLYVISVLVRAFGNAGYIPPIIAAWVPVIIALFLGISFLLHKEDG 363 >gi|220932597|ref|YP_002509505.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] gi|219993907|gb|ACL70510.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] Length = 1040 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 144/363 (39%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K L L + + ++ + L + + + ++ L ++P Sbjct: 7 KRIIDVYIIKEVLYPFLIG-VSIIGVIMLSGLLRQLSDLIIIKKIPVAVVLKLLLYQLPE 65 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II Q P L + LNR +E R GIS+++L+ P ++ I++ T L+ Sbjct: 66 IIVQTFPIAILFATMSGMGRLNRENEFTALRMGGISLYRLILPLLILGIVISGMTYLLNE 125 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + ++I++ + + + + + E++I + Sbjct: 126 EIVPWTKHRAQNIIRKSVLKEVPPDIKENVFFKGPDGR---LFYVGRFDKEDNIMKKIVV 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDG 236 T N A+L +Y +K LKK ++Y + + I ++ Sbjct: 183 YTFKGDNGYPLIVTANLGEVYKEKWVLKKGFIHRYNGEGHLTMETRFDVMEIKINTEVHN 242 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F + S E+ K++ S I + ++ + +PL + LI +SL Sbjct: 243 FFADQKTPDEMSREELKKEIDLFQNSGI-DVHSLLVDYHLKLSMPLAALIFILIGTPLSL 301 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + + I F+ Y ++++ +SFG++G L PV AA +P I+ + I +L+ Sbjct: 302 TSK--DSRSFSIIFTIVVVFLYYFVMSLSRSFGRNGRLDPVLAAWLPNIIFSIIGITLLI 359 Query: 357 QKE 359 +E Sbjct: 360 WRE 362 >gi|52842835|ref|YP_096634.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629946|gb|AAU28687.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 356 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 120/358 (33%), Gaps = 10/358 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL RY K L L + L I + +G +Y I + V ++P Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLG-RADYGIVQAGVFVLLQMPYQ 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + P +L+ +V L SELV+ RA GISI Q+ + S+++ + + Sbjct: 63 VYLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGET 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + G + W++ N I + + Sbjct: 123 IVPVMAHYANEYKVSALTGGQALLTPRGVWVRNGNDFVSI-----ASVTHENTLRYVNQF 177 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQK 239 D ++ + + N+ V + ++ ++ ++P+K + + Sbjct: 178 RFDNQHNLKLARQISEVKYVNNSWIAYDVKQTEFAEDHTKAHHFDTLPWDVPVKPEILKI 237 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + +E+ + + + N + + F+ I PL + M ++A Sbjct: 238 TGTNPDEMTLHELNRYLRE-QQRNHQNVANYKFAFFQRITQPLNTMVMMILAIPFIFGPL 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + G GF + + P AA P ++ + I ++ + Sbjct: 297 RSSTMGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRR 354 >gi|325578599|ref|ZP_08148699.1| YjgP/YjgQ family membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|301156461|emb|CBW15932.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1] gi|325159835|gb|EGC71965.1| YjgP/YjgQ family membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 359 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 126/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 + L RY K L L + L +I E +G+ +Y I + +P Sbjct: 2 LMNTLDRYIGKSILGAIFATLFTLVGLSAIIKFVEQFRSVGK-GSYDIWQAVAYTGLTIP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ NL SELV+ ++ G S +++ + ++ L +FT+++ Sbjct: 61 KDVETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGLAVMKTALPLVLFTMIIG 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + N + E+ F Sbjct: 121 EWGIPQTEQFARDMRTRALSGGSMLSVKNGVWAKDGNNFVYVRRITDDAQLEDIYIYTFD 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K ++ ++ + ++ + + D Sbjct: 181 EQRNLTHLKHANQAQYSAENNQWQLRQVNNSAVSKEQITTTNRLTEDWATSLTPDKLGAV 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + + ++F ++ + R E ++ I PL + M ++A S R Sbjct: 241 SLRPTSLSISGLYEYIAFLKQTGQ-DSRRFELTYWRKIFQPLSVGVMMMLALSFIFGSLR 299 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I AL+P +L +++ +L +K D Sbjct: 300 SVTAGARIVTGICFGFLFYVVNEIFGQMSVVFNAPAFLGALMPSLLFMAIIWWLLARKRD 359 >gi|86609823|ref|YP_478585.1| YjgP/YjgQ family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558365|gb|ABD03322.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 400 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 117/373 (31%), Gaps = 19/373 (5%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G++ RY L L+ + LV + ++ S+S + R P I Sbjct: 26 GLMDRYVLSEMLLPFLFGVGAFTTLVMAVGSLFELVRLVVEAGLSLSAALQVFVLRAPGI 85 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I P L+ ++ + L+ +E+ R G+S+++L+ P +V S+L+ T L Sbjct: 86 IVLTFPMSMLLATLLAYGRLSADNEITALRGCGVSLYRLMVPALVLSLLVTTLTFLFNEL 145 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD------------IFIGAKKIL 170 + + + + + + + I + + + Sbjct: 146 VVPVSNRQAATTLNRALNRDPDFRRENILYQEFGEILMPEPDGTFSRRQGLTRQFYARSF 205 Query: 171 PENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNS 225 + ++ I + + Y + Sbjct: 206 DGKQMRGIIVLDFSNEALNQILLAQRGRWDPQENLWVFEDGTNYIVSPDGTYSNIATFSR 265 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLML 284 L +P + + E+ + S R + IP Sbjct: 266 QELRLPRAPLELAQEIRSPEEMNIRELKHYIEVIASSGDLQRVRRLQVSLNQKYAIPFAC 325 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 +A TLI + L R+ + + + F Y ++ I ++ G+ G L P AA +P Sbjct: 326 LAFTLIGVPLGLRPQRTGS-SLGLGISVLIIFAFYVLLFITQALGQIGTLGPATAAWLPN 384 Query: 345 ILTISLSILILLQ 357 + + + +L + Sbjct: 385 FICAVVGLGLLHR 397 >gi|313892370|ref|ZP_07825962.1| permease, YjgP/YjgQ family [Dialister microaerophilus UPII 345-E] gi|329121341|ref|ZP_08249967.1| YjgP/YjgQ family permease [Dialister micraerophilus DSM 19965] gi|313119229|gb|EFR42429.1| permease, YjgP/YjgQ family [Dialister microaerophilus UPII 345-E] gi|327469750|gb|EGF15216.1| YjgP/YjgQ family permease [Dialister micraerophilus DSM 19965] Length = 361 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 120/360 (33%), Gaps = 6/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L L+ + + D S + +P Sbjct: 1 MRILDKYILKEFLGPFLFGVAAFTAIFLGSDTLLSIAGFITKYGASSLSAIKIFILAIPR 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P L+ ++ +L+ SEL++ R G S +L P + S ++ I + Sbjct: 61 IIVYTFPMAVLLGALMCMSSLSGASELIVMRNSGQSFLRLAMPIFIFSAIISICAIAFNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ M+ + + K + Sbjct: 121 FVVPWTNREYQYILDVEIKKNLNPDIVDNIVMKDIQDGNLLHLIYAKKYNPETKELKDIT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLNIPIKMDGF 237 I K K + + + A+ K+ V Y ++ +S + K D Sbjct: 181 IQEFKDGKPVKIEMSPKAVWKEGVWDFKQGVAYDITPDGVEHKLSFDSQAVPFIQKPDEI 240 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S E+ K +N + + +P+ + +I A + + Sbjct: 241 KNSNNNVGEMSISELKKTADLLKSANQ-DPTSFYMEIHKRFSLPIASLVFAIIGAPLGIR 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + F+ Y ++T M++ G+ IL P AA +P ILT + ++ + Sbjct: 300 KQRSSSSIGFGIS-VIVIFIYYAVMTFMEAMGEGHILPPFAAVWLPDILTFLIGCYLVRR 358 >gi|220932585|ref|YP_002509493.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] gi|219993895|gb|ACL70498.1| permease YjgP/YjgQ family protein [Halothermothrix orenii H 168] Length = 365 Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 129/364 (35%), Gaps = 8/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I++RY + + L+ + + D+ ++ + L ++P Sbjct: 1 MKIIYRYLTRELIMPFLFGVAAFTAIFIGTDILFTLTRLYNNFGVEFTTLVQLFFLKLPP 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P TL+ ++ F L+ E+ RA G+S+++++ P ++ +++ + T++V Sbjct: 61 IIVLTFPMATLMGTLMSFGRLSGDGEITAFRAGGVSVYKIVIPSLLVGLIMSVTTIMVNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI---SNPQQDIFIGAKKILPENHIWED 178 + + ++ + K+ + + + D + + E I D Sbjct: 121 MVVPRANYLYDQIVWEIKNGRKMPATQYDLTLTPLDRKYRRPDYILYTHRFNGETGIMND 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKM 234 +K + K + + Y + Sbjct: 181 VYLQDYEKGVPVTLIKARKAVWQGDKWHFYNGNIYYFKEGERVPALKFNEYVIKQPIYTP 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 K ++ SF E+ + + F + + +++ I IP L+AA + Sbjct: 241 RRIGKMNKDIEDMSFKELGEYIQFLEEQG-KDTFEERVKYHQKIAIPFASFIFALLAAPL 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ RS + I F+ YTI+T+ + G+ G + P A + + + + + Sbjct: 300 GIKPRRSGGTATGMGLSIIVIFIYYTIMTLGSALGERGTISPFFGAWLQNFIFLIVGGYM 359 Query: 355 LLQK 358 + + Sbjct: 360 IYRM 363 >gi|95928710|ref|ZP_01311456.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] gi|95135055|gb|EAT16708.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] Length = 360 Score = 144 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 139/363 (38%), Gaps = 11/363 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY + K T L + + ++D E + E + A ++PLI+ Sbjct: 3 LIQRYLLTTFTKITSLSLAAFVGIYLLVDFFEKVDDFLE-HEAAAHLYIAYFAWKIPLIV 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q++P L+ + +T+EL RA GI + +++ PF+V ++LL + + Sbjct: 62 SQMLPLTILLGTFLTLGGFTKTNELTAMRAGGIGLQRIVTPFLVTAVLLTGINFALNEFL 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + + + + + + + + + LPE + Sbjct: 122 VPVGTQRSNHIFRTEVKGKTQMLAKRN---DLWFREANTLYHIQLALPEKKQLRGISLYL 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI------PIDKNSTTLNIPIKMDGF 237 +D + ++ R +A A D+ + + V + ++N L + + F Sbjct: 179 VDSQLNLLTRIEAQAATFKEDQWQAEHVTVRHFDPQSRQLTAQKEENLRLLPLKKTPEDF 238 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + SF ++ K+S + R + + P + M +A +L+ Sbjct: 239 GTVSGKNEELSFTQL-SKISTQMQREGLDATRYRVDMHSRLSTPFACIIMAFLAIPFALQ 297 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 SR+ + ++ + G + + + + + G S +L P AA I+ + + +LL Sbjct: 298 KSRNVNLSLGISISVLIGISFFIVQSTLIALGYSTVLPPFIAAWAANIIFALVGLFLLLS 357 Query: 358 KED 360 D Sbjct: 358 TRD 360 >gi|332290236|ref|YP_004421088.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] gi|330433132|gb|AEC18191.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] Length = 356 Score = 144 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 68/361 (18%), Positives = 124/361 (34%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L T L + L +I E +GE NY ++ +P Sbjct: 1 MFNTLDRYIGKTILATIFVVLFLLVGLSAIIKFVEQFRAIGE-GNYDTAKAIAYTLLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ +L SELV+ +A G S +Q+ + +I L I + + Sbjct: 60 KDIETFFPMAALLGALIGLGSLASNSELVVMQASGFSRFQIGLSVMKVAIPLIILNMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ ++ + G W + N I +P+ + Sbjct: 120 EWGIPQTEQFAREMRYKSLTGGSLLSVKGSVWAKDGNSFVYIQH-----IPKENQLNGIY 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D+ + A+ A N++ + ++ E + I I D Sbjct: 175 IYQFDQNRNLQKMSQANRATYANNEWRFNQISESELNGDHITNKKYLNKVWQTSITPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + + S + + F + E ++ ++ P+ + M L+A S Sbjct: 235 GMVSLRPSMLSITGLSDYIQFLKNTGQ-DTKTFELTYWRKLLQPISISVMMLLALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + V GI GF Y + + + P AL P I ++ ++ Sbjct: 294 PLRSVTSGVRVIIGICCGFAFYVLDQVFGPLSLVYNIPPFIGALAPSIFFAAIIWWLMAH 353 Query: 358 K 358 K Sbjct: 354 K 354 >gi|114319721|ref|YP_741404.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226115|gb|ABI55914.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 360 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 117/361 (32%), Gaps = 7/361 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY + + L L+ M L V + +G +Y P Sbjct: 1 MIRLLDRYLIITVVASALVALVVIMSLDLVFSFVDEGGDIG-TADYGPLSALAYVLLSSP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + PF TL+ ++ L +EL + RA G+S+ Q+ G ++L + + + Sbjct: 60 SRAYEAFPFATLIGALMGLGALAARNELTVMRAAGVSVLQIARAVAAGGLVLALIAMAMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + E+ +L W + ++ E F Sbjct: 120 EWVVPPAERAATELRASAMARDVGISGAGGLWARDGGQFIEVRRARSPAHLEGLTIYHFE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDG 236 + + A+ + + L++ E I + + Sbjct: 180 ERDGEP-MTLRRVLSGSEALFRDGRWILREPGEVHLHADGISVADLGDEKVWESALSPAV 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S ++ + + +N + F+ + P+ +AM L+ + Sbjct: 239 LDVVVVDPESLSMADLRTYIGYLE-ANELDSGEWRLAFWVKVATPISTLAMLLLTIPLVF 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + G+ G + + ++ G L P A+AL+P ++ IL +L Sbjct: 298 GAVRSTGAGQRIFIGVLIGVAFFLVNRMLNHAGVVFGLPPSASALLPAFAFLAAGILGIL 357 Query: 357 Q 357 + Sbjct: 358 K 358 >gi|300114326|ref|YP_003760901.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] gi|299540263|gb|ADJ28580.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] Length = 354 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 117/360 (32%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + TL L + L + +GE NY + +P Sbjct: 1 MKILDRYIAKAVISYTLLVLFILIALYTFLQFITELEDVGE-GNYGVMGALRYTTYSIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++P L+ +++ L SELV RA G S+ ++ + ++ I TVL+ Sbjct: 60 HIYDLLPVAALLGSVLGLGYLAGQSELVAMRAAGFSVGRITLSALATGMIFVIATVLMGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ L K + + W + + N +E Sbjct: 120 VVAPPAQQAANKLRSLAKTGHLSEDGEQGFW-----SRNGNNFNHVGRVLPNGQYEYIEI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI---PIDKNSTTLNIPIKMDGFQ 238 D + ++ A AI + D L V + + + Sbjct: 175 FEFDNQRRLRIVTQATRAIYHKDGWHLYDVTQRLISTEGIITRRLEEALWESGLSPEMLD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + + + +S + + F+ IV P + M +A Sbjct: 235 VVMVDPQQLSAWGLYRYIGYLQQS-KQAAEQYQQAFWSKIVAPFSTLIMMFLAIPFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G G + + G P A P +L ++L +++L + Sbjct: 294 LRSVSVGQRILVGALVGIGFFLFNRLFNQLGLVFDFSPWLGAAFPSLLCLALGVVMLRRI 353 >gi|146313280|ref|YP_001178354.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] gi|145320156|gb|ABP62303.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] Length = 360 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + +P Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSIPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLMSTQQGLWAKDGNNFVYIERVKGDDELGGVSIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D A ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDSANRVWRLSQVDESNLQDPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I P+ + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPMSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +LL++ Sbjct: 302 SVAMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPLIGALLPSASFFLISLWLLLRR 359 >gi|77919519|ref|YP_357334.1| hypothetical protein Pcar_1923 [Pelobacter carbinolicus DSM 2380] gi|77545602|gb|ABA89164.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 362 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 126/365 (34%), Gaps = 10/365 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + RY + + + L +++ E + E + S++ + P Sbjct: 1 MTPLYSRYILATFFRLFGLAIGAFAGLYLLVEFFERIDDFIEY-HASVTLCVAYFLNKTP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LII Q+ P L+ + R+ ELV A GIS+ ++ P + +L + + Sbjct: 60 LIITQVAPLACLMAVFMTLGGFTRSGELVAMHAGGISLAKIAAPMLRMGLLFSLIILAAN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + ++ G +I + ++I P + T Sbjct: 120 EVIVPPSIQRARHILTTEVRGGPAVHYKQD---KIWLRHNRSILNIRQIEPVQQTLKGIT 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI------PIDKNSTTLNIPIKM 234 ++ DK +I R DA A+ + + V ++ ++P+ Sbjct: 177 LLSFDKNFRIQQRFDAGSAVYSGGRWYCQDAVTRRFDTTSGNLLTEQRLAEKIEDLPVVP 236 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + F+ + ++ K ++ R + + I P + MT + Sbjct: 237 EDFKVPGSKRNEDLPISEFHRLGKKLKREGYNPTRFQVDMHARIAAPFGCLMMTFLGIPF 296 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ R + +A + G + + + + +FG SG P+ AA IL + + Sbjct: 297 AIRKGRGASMALGIAISVAIGALYFILNATLLAFGYSGTFPPIIAAWSANILFLLFGTWL 356 Query: 355 LLQKE 359 L E Sbjct: 357 FLHSE 361 >gi|254507394|ref|ZP_05119529.1| permease YjgP/YjgQ [Vibrio parahaemolyticus 16] gi|219549650|gb|EED26640.1| permease YjgP/YjgQ [Vibrio parahaemolyticus 16] Length = 356 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 117/358 (32%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E +G+ +Y + +P Sbjct: 1 MFKILDLYIGRTIIATTSMVLATLIGLSSIIRFVEQLRSVGK-GSYDLLNAFYFVLLGIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ L+ ++ L +SELV+ +A G S + + +I L + +L+ Sbjct: 60 RDIELFFAMSALLGALIGLGILASSSELVVMQASGYSKLDIGLSVLKTAIPLMLIIMLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ +L G W + + I L +W Sbjct: 120 EWGAPQAQKMARELRSFSISGGQIVSVRAGVWARDVDDFIFIGKVEDDTLYGVKVWRFDD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + ++ + + + D Sbjct: 180 EKKLYQVMFAPEADYLGDNQWLMKNAEITDM-ADKVELAKSKVKEYAWKTTLVPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + +++ ++ R E + + P+ + M L+A S R Sbjct: 239 KVEPEELAMSGLYDYVTYLK-ASEQDASRYELALWRKVTQPISIAVMMLLALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V G+ +GF Y + P A++P ++ ++L++++L +K Sbjct: 298 SVSMGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPAVGAVMPSLVFLTLALMLLRRK 355 >gi|54298618|ref|YP_124987.1| hypothetical protein lpp2682 [Legionella pneumophila str. Paris] gi|148358636|ref|YP_001249843.1| permease [Legionella pneumophila str. Corby] gi|296108274|ref|YP_003619975.1| permease [Legionella pneumophila 2300/99 Alcoy] gi|53752403|emb|CAH13835.1| hypothetical protein lpp2682 [Legionella pneumophila str. Paris] gi|148280409|gb|ABQ54497.1| permease [Legionella pneumophila str. Corby] gi|295650176|gb|ADG26023.1| permease [Legionella pneumophila 2300/99 Alcoy] Length = 356 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 120/358 (33%), Gaps = 10/358 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL RY K L L + L I + +G +Y I + V ++P Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLG-RADYGIVQAGVFVLLQMPYQ 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + P +L+ +V L SELV+ RA GISI Q+ + S+++ + + Sbjct: 63 VYLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGET 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + G + W++ N I + + Sbjct: 123 IVPVMAHYANEYKVSALTGGQALLTPRGVWVRNGNDFVSI-----ASVTHENTLRYVNQF 177 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQK 239 D ++ + + N+ V + ++ ++ ++P+K + + Sbjct: 178 RFDNQHNLKLARQISEVKYVNNSWIAYDVKQTEFAEDHTKAYHFDTLPWDVPVKPEILKI 237 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + +E+ + + + N + + F+ I PL + M ++A Sbjct: 238 TGTNPDEMTLHELNRYLRE-QQRNHQNVSNYKFAFFQRITQPLNTMVMMILAIPFIFGPL 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + G GF + + P AA P ++ + I ++ + Sbjct: 297 RSSTMGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRR 354 >gi|307129164|ref|YP_003881180.1| hypothetical protein Dda3937_01300 [Dickeya dadantii 3937] gi|306526693|gb|ADM96623.1| conserved inner membrane protein [Dickeya dadantii 3937] Length = 356 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 139/362 (38%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T + L + L +I + ++G+ YS+ + VP Sbjct: 1 MFRVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GGYSVMGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLATRSELVVMQASGFTRLQIAAAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +GE++ + Q G + W + N I + + Sbjct: 120 EWMAPAGEQMARNYRSQMMYGGSMLSTQGGLWAKDGNDFVYIQR-----VAGENELAGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDG 236 DK++K++ + A A+ N KL +V E S + D Sbjct: 175 IYHFDKQSKLLSIRYAASALYENGTWKLSQVEESDLRDSKQIGGSQTVSGEWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + +++ ++S R + + + PL + M L+A S Sbjct: 235 LGVVALDPDALSIRGLFDYINYLHQSGQ-EASRYQLNMWSKLFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + + GI GF+ Y + I + PV A +P L + +SI++LL Sbjct: 294 GPLRSVPAGVRIVIGISFGFLFYVLDQIFGPLSLVYHIPPVLGASLPSALFLFISIMLLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|251791279|ref|YP_003006000.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] gi|247539900|gb|ACT08521.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] Length = 356 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 138/362 (38%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T + L + L +I + ++G+ YS+ + VP Sbjct: 1 MFRVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLRKVGQ-GGYSVMGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +GE++ + Q G + W + N I + Sbjct: 120 EWVAPAGEQMARNYRSQMMYGGSMLSTQSGLWAKDGNDFVYIQR-----VAGESELLGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDG 236 DK+NK++ + A A+ N KL +V E S + D Sbjct: 175 IYHFDKQNKLLSVRYAASAVYENGGWKLSQVEESDLSDGKQIGGSQTVSGEWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + S + +++ +S R + + + PL + M L+A S Sbjct: 235 LGVVALEPDALSIRGLYDYINYLRQSGQ-EASRYQLNMWSKLFAPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + + GI GF+ Y + I + PV A +P L + +SI++LL Sbjct: 294 GPLRSVPAGMRIVIGISFGFLFYVLDQIFGPLSLVYHIPPVLGASLPSALFLFISIMLLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|54295468|ref|YP_127883.1| hypothetical protein lpl2554 [Legionella pneumophila str. Lens] gi|53755300|emb|CAH16794.1| hypothetical protein lpl2554 [Legionella pneumophila str. Lens] gi|307611506|emb|CBX01180.1| hypothetical protein LPW_28791 [Legionella pneumophila 130b] Length = 356 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 120/358 (33%), Gaps = 10/358 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL RY K L L + L I + +G +Y I + V ++P Sbjct: 4 KILDRYIAKTVLSAIGLVTLMLVGLQIFILFVNQIDDLG-RADYGIVQAGVFVLLQMPYQ 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + P +L+ +V L SELV+ RA GISI Q+ + S+++ + + Sbjct: 63 VYLFFPIASLLGCLVGLGVLANHSELVVMRAAGISIGQITGAVLKASLIVILLITSLGET 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + G + W++ N I + + Sbjct: 123 VVPVMAHYANEYKVSALTGGQALLTPRGVWVRNGNDFVSI-----ASVTRENTLRYVNQF 177 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQK 239 D ++ + + N+ V + ++ ++ ++P+K + + Sbjct: 178 RFDNQHNLKLARQISEIKYVNNSWIAYDVKQTEFAEDHTKAYHFDTLPWDVPVKPEILKI 237 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + +E+ + + + N + + F+ I PL + M ++A Sbjct: 238 TGTNPDEMTLHELNRYLRE-QQRNHQNVANYKFAFFQRITQPLNTMVMMILAIPFIFGPL 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + G GF + + P AA P ++ + I ++ + Sbjct: 297 RSSTMGSKLLVGAMVGFGFHILNRFFGPVSTVFQWPPELAAFSPTLIFSLIGIYLMRR 354 >gi|313200016|ref|YP_004038674.1| permease [Methylovorus sp. MP688] gi|312439332|gb|ADQ83438.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 356 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 122/361 (33%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + + + ++ + + DL + +G+ Y +++ V P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGK-GTYGLNKVLVFVLLSAPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P LV + L+R SEL+I R GISI + + ++ + T V Sbjct: 60 HVYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EK L Q D+ Q W++ ++ + Sbjct: 120 FVTPYSEKTAQRLRIQATDSVVAQDFRSGLWVKDGRSFVNVEEVMPDSG-----LMNIHI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 D + DA + LK V + + + I+ + Sbjct: 175 YEFDDSFHLRTISDAKTGRFDGENWHLKDVQQTHFLDKTVKSEFFPQAQWQSLIRPELLN 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + +N R E + +V PL + M ++A Sbjct: 235 VLLVVPEKMSAWNLYFYIHHL-SANKQKTSRHEIALWSKMVYPLASLVMVVLALPFGFLQ 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI G + + + G P+ +A++P +L + + +L Sbjct: 294 QRSGGASAKIFAGIMLGIVYQVLNRVFVHLGLLNDWSPLMSAVVPTLLFLLAGLTMLFMA 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|148546263|ref|YP_001266365.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] gi|148510321|gb|ABQ77181.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] Length = 353 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 127/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L L + L + + + + Y++ P Sbjct: 1 MAK-LDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDLSDT--YTVLEAGNFVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ +L +SEL I RA G+SI +++ + ++L + +L+ Sbjct: 58 RRLYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + G+ Q S W + I + + + T Sbjct: 118 EYVAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHI-----NAVQPDGLLLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D + KI+ A A ND L V + + ++ + + Sbjct: 173 RYRFDSERKIVTSSFARRAQYQNDHWLLADVRTTYFRGDHTEVVNAPEERWDVSLTPELL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + + +N R F+ ++ P++ A+ L+A S Sbjct: 233 NTVILAPESLSITGLWDYIHYLSDQG-LNNSRYWLAFWTKVLQPMVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF+ ++ + P+ A +IP + + +L + Sbjct: 292 PLRSVTLGQRVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRR 351 >gi|204927347|ref|ZP_03218549.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204324012|gb|EDZ09207.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 360 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + PV AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPVVGALLPSASFFLISLWLMLRK 359 >gi|289623814|ref|ZP_06456768.1| hypothetical protein PsyrpaN_01505 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298485820|ref|ZP_07003898.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159644|gb|EFI00687.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330867847|gb|EGH02556.1| hypothetical protein PSYAE_11466 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330890524|gb|EGH23185.1| hypothetical protein PSYMO_17663 [Pseudomonas syringae pv. mori str. 301020] gi|330989712|gb|EGH87815.1| hypothetical protein PLA107_32131 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009019|gb|EGH89075.1| hypothetical protein PSYTB_04820 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 353 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 124/360 (34%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y+++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDT--YTLADALSYVMLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL + VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D + ++ A A D +LK V + + +T ++ + Sbjct: 173 RYRFDDQRHMLTSSFAKEANFKTDYWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWNYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF I ++ P+ A L+P + +L + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLLRR 351 >gi|161505032|ref|YP_001572144.1| hypothetical protein SARI_03163 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866379|gb|ABX23002.1| hypothetical protein SARI_03163 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 360 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTDLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|71737643|ref|YP_273426.1| hypothetical protein PSPPH_1159 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558196|gb|AAZ37407.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322887|gb|EFW78978.1| hypothetical protein PsgB076_20532 [Pseudomonas syringae pv. glycinea str. B076] gi|320329804|gb|EFW85792.1| hypothetical protein PsgRace4_11126 [Pseudomonas syringae pv. glycinea str. race 4] Length = 353 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 123/360 (34%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y+++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDT--YTLADALSYVMLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL + VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGEEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D + ++ A A D +LK V + + +T ++ + Sbjct: 173 RYRFDDQRHMLTSSFAKEANFKTDYWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWNYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF I ++ P+ A L+P + +L + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLLRR 351 >gi|308189158|ref|YP_003933289.1| Inner membrane protein yjgQ [Pantoea vagans C9-1] gi|308059668|gb|ADO11840.1| Inner membrane protein yjgQ [Pantoea vagans C9-1] Length = 358 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 128/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY K T + L + L +I + + G+ +YS VP Sbjct: 1 MFRVLDRYIGKTIFNTIMLTLFMLVSLSGIIKFVDQLRKTGQ-GSYSALSAGYYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQAAGFTRMQVALSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A SGE++ + Q G + W + N I + +F Sbjct: 120 EFVAPSGEQMARNYRAQQLYGGALVSTQNGLWAKDGNNFIYIERIKGDNEIDGVSIYNFN 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + D A ++ + I ++ S + D Sbjct: 180 DQRRLQSVRYAATATWDAAKKRWMLSQVDESNLTDPKLITGSQSLSGEWKTNLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +S R + + I PL + M L+A S Sbjct: 240 VALDPDALSIRGLHSYSKYLKQSGQ-EAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I L P+ A++P ++S+ +L+++ Sbjct: 299 RSVSMGVRVVTGISFGFLFYVLDQIFGPLSLVYGLPPILGAILPSFAFFAISMFMLIKR 357 >gi|319896845|ref|YP_004135040.1| inner membrane protein [Haemophilus influenzae F3031] gi|317432349|emb|CBY80704.1| conserved inner membrane protein [Haemophilus influenzae F3031] Length = 358 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 126/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L LL + L +I E +G+ Y I + +P Sbjct: 1 MMNTLDRYIGKSILGAIFATLLTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVAFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELV+ ++ G S +++ + + L + T+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGIAVMKTASPLVLLTMMIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|289649165|ref|ZP_06480508.1| hypothetical protein Psyrpa2_15669 [Pseudomonas syringae pv. aesculi str. 2250] Length = 353 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 124/360 (34%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y+++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDT--YTLADALSYVMLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL + VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D + ++ A A D +LK V + + +T ++ + Sbjct: 173 RYRFDDQRHMLTSSFAKEANFKTDYWELKDVSTTHFNDGRTEVINTPVERWDVALSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWNYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF I ++ P+ A L+P + +L + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAACALAGVYLLRR 351 >gi|261819787|ref|YP_003257893.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] gi|261603800|gb|ACX86286.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] Length = 358 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 127/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ YS + VP Sbjct: 1 MFGVLDRYIGKTIFTTIITTLFMLVSLSGIIKFVDQLRKVGQ-GEYSALGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIETFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIATAVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 ++ GE++ + Q G + W + N I F Sbjct: 120 EWVSPQGEQMARNYRSQMISGGSMISTQGGLWAKDGNDFIYIERIVGDKELSGVNIYHFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + D + ++ + +I + S + D Sbjct: 180 EQNKLLSVRYAASAEFDKDRNVWNLSQVDESDLSDGKQIGGSQTLSGEWKTNLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + S + + +S R + + I P+ + M L+A S Sbjct: 240 VALEPNALSIRGLHDYAKYLKQSGQESG-RYQLNMWSKIFAPVSVAVMMLMAVSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF Y + I + + P+ A++P + + +S+ +LL++ Sbjct: 299 RSVSAGSRIVIGISFGFFFYLLNEIFRPLSLVYGIPPILGAVLPSSVFLFISVALLLKR 357 >gi|253997950|ref|YP_003050013.1| permease [Methylovorus sp. SIP3-4] gi|253984629|gb|ACT49486.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 356 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 123/361 (34%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + + + ++ + + DL + +G+ Y +++ + P Sbjct: 1 MKLLNRYLTQEIVSSIMLIMVALLAMFSFFDLIQELESIGK-GTYGLNKVLMFVLLSAPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P LV + L+R SEL+I R GISI + + ++ + T V Sbjct: 60 HVYEVVPVAVLVGTMYALGQLSRHSELIILRVSGISIATIARSLLKVGLIFAVITFFVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EK L Q D+ Q W++ ++ + + Sbjct: 120 FVTPYSEKTAQRLRIQATDSVVAQDFRSGLWVKDGRSFVNVEEVM-----PDSELMNIHI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 D + DA + LK V + + + I+ + Sbjct: 175 YEFDDTFHLRTISDAKTGRFDGENWHLKDVQQTHFLDKTVKSEFFPQAQWQSLIRPELLN 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + +N R E + +V PL + M ++A Sbjct: 235 VLLVVPEKMSAWNLYFYIHHL-SANKQKTSRHEIALWSKMVYPLASLVMVVLALPFGFLQ 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI G + + + G P+ +A++P +L + + +L Sbjct: 294 QRSGGASAKIFAGIMLGIVYQVLNRVFVHLGLLNDWSPLMSAVVPTLLFLLAGLTMLFMA 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|237729200|ref|ZP_04559681.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908929|gb|EEH94847.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 360 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + P Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDAMGAGLYTLLSAPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + + I F Sbjct: 123 WVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGDSFVYIERVKGDAELGGISIYSFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 KRRLQSVRYAASATFDPEQKVWRLSQVDESNLTDPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + + PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKVFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMLRK 359 >gi|16767725|ref|NP_463340.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56416251|ref|YP_153326.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161617774|ref|YP_001591739.1| hypothetical protein SPAB_05637 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551264|ref|ZP_02345019.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991269|ref|ZP_02572368.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232820|ref|ZP_02657878.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234610|ref|ZP_02659668.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244031|ref|ZP_02668963.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262477|ref|ZP_02684450.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464638|ref|ZP_02698541.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821095|ref|ZP_02833095.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446562|ref|YP_002043719.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449673|ref|YP_002048503.1| hypothetical protein SeHA_C4884 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470492|ref|ZP_03076476.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738007|ref|YP_002117400.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249048|ref|YP_002149399.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262055|ref|ZP_03162129.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197365174|ref|YP_002144811.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242808|ref|YP_002218343.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388381|ref|ZP_03214993.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205355211|ref|YP_002229012.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859605|ref|YP_002246256.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238910635|ref|ZP_04654472.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16423045|gb|AAL23299.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56130508|gb|AAV80014.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161367138|gb|ABX70906.1| hypothetical protein SPAB_05637 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405225|gb|ACF65447.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407977|gb|ACF68196.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456856|gb|EDX45695.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713509|gb|ACF92730.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632823|gb|EDX51277.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096651|emb|CAR62266.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212751|gb|ACH50148.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240310|gb|EDY22930.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197292043|gb|EDY31393.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937324|gb|ACH74657.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605479|gb|EDZ04024.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274992|emb|CAR40066.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323911|gb|EDZ11750.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330351|gb|EDZ17115.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333019|gb|EDZ19783.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337021|gb|EDZ23785.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342262|gb|EDZ29026.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348818|gb|EDZ35449.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711408|emb|CAR35787.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249568|emb|CBG27435.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996824|gb|ACY91709.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160964|emb|CBW20498.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915576|dbj|BAJ39550.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322615643|gb|EFY12563.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618703|gb|EFY15592.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621884|gb|EFY18734.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627609|gb|EFY24400.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630915|gb|EFY27679.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637866|gb|EFY34567.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642324|gb|EFY38930.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643901|gb|EFY40449.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651023|gb|EFY47408.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656724|gb|EFY53012.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659852|gb|EFY56095.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661937|gb|EFY58153.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666315|gb|EFY62493.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672734|gb|EFY68845.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676164|gb|EFY72235.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680648|gb|EFY76686.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684458|gb|EFY80462.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323132817|gb|ADX20247.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194205|gb|EFZ79402.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197350|gb|EFZ82490.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201532|gb|EFZ86596.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206046|gb|EFZ91008.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213057|gb|EFZ97859.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215428|gb|EGA00172.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219412|gb|EGA03897.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227716|gb|EGA11870.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228886|gb|EGA13015.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236502|gb|EGA20578.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239997|gb|EGA24044.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241956|gb|EGA25985.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247895|gb|EGA31832.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251467|gb|EGA35338.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258167|gb|EGA41844.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263687|gb|EGA47208.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265717|gb|EGA49213.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270161|gb|EGA53609.1| lipopolysaccharide ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326626151|gb|EGE32496.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630369|gb|EGE36712.1| putative permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332991289|gb|AEF10272.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 360 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|126175308|ref|YP_001051457.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|153001630|ref|YP_001367311.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217972441|ref|YP_002357192.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998513|gb|ABN62588.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|151366248|gb|ABS09248.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|217497576|gb|ACK45769.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 352 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 125/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G YS+ + VP Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVG-RGTYSMMDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ +A G+S Q+ + ++ L + +++ Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPIAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VENINKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 + + K+ + AD A+ D+ +L V + D Sbjct: 175 YKFNSELKLTNVVHADRAVFSQDRWRLFDVKRTDLSYEKVVLEYLEEDQWQSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + ++ R E + ++ P+ + M L+A S Sbjct: 235 VVSIKPEALSIRGLVGYLDYLKTNSQ-DPSRYELALWRKVMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFYFIRR 352 >gi|16763280|ref|NP_458897.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144759|ref|NP_808101.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213162831|ref|ZP_03348541.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427634|ref|ZP_03360384.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618568|ref|ZP_03372394.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650367|ref|ZP_03380420.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289824527|ref|ZP_06544086.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513067|pir||AG1061 probable inner membrane protein STY4818 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505588|emb|CAD06940.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140398|gb|AAO71961.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 360 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|290968957|ref|ZP_06560492.1| YjgP/YjgQ family [Megasphaera genomosp. type_1 str. 28L] gi|290780913|gb|EFD93506.1| YjgP/YjgQ family [Megasphaera genomosp. type_1 str. 28L] Length = 362 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 134/362 (37%), Gaps = 7/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K ++ L+ + + M S + A + +P Sbjct: 1 MRILDKYILKEFIGPFLFGVCAFTAVFVGTGTLYRIASMINEYGASAAAAAKVLVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ F L+ SE+++ RA G +L P +V + + + T Sbjct: 61 IVVLTFPMSVLLGALMAFGRLSAASEIIVMRAGGQHFVRLAMPVLVAAFFISLGTTAFNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + + S ++ + Q + + + Sbjct: 121 FVVPRANNAYNRIINEEIRHHALPVSQEHVIIKNVHGQNIYGLLYARQYDGTEKEFRDIT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKV-----KLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + ++++++ + AD A K + V + + L + + Sbjct: 181 VQEFEQDRLVRVEKADRAKWNGKKWIVHQGSIYDVSSNDNTSRTMTFENQELPFMQRPEK 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q+ ++ + E+ +++ + + + + Y +PL + LI A + L Sbjct: 241 VQEAQKKPEELTIRELRQQIRVLTAHGV-DVNKLKVEMYNRFALPLASLVCALIGAPLGL 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R I + + F+ Y+I+T+ + G G + P AAA +P I+ S+ I +++ Sbjct: 300 QKQR-GSSSIGFGISVVTIFIYYSIMTLADALGNGGTIAPAAAAFLPDIICGSVGIFLMI 358 Query: 357 QK 358 +K Sbjct: 359 RK 360 >gi|56751017|ref|YP_171718.1| hypothetical protein syc1008_d [Synechococcus elongatus PCC 6301] gi|81299323|ref|YP_399531.1| hypothetical protein Synpcc7942_0512 [Synechococcus elongatus PCC 7942] gi|56685976|dbj|BAD79198.1| hypothetical protein YCF84 [Synechococcus elongatus PCC 6301] gi|81168204|gb|ABB56544.1| conserved hypothetical protein YCF84 [Synechococcus elongatus PCC 7942] Length = 394 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 114/361 (31%), Gaps = 9/361 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + L L+ + + I + + +S A + ++P + Sbjct: 29 IMDRYILREMLGPFLFGVGAFTSVGLSIGVVFELVRQVTEAGLPLSVAAQVFLLKMPDFL 88 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ R+ GIS ++ + P ++ SI++ T + Sbjct: 89 VLAFPMSMLLSALMAYNRLSSDSELIALRSCGISSYRFILPGILMSIVVTGMTFAFYESV 148 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ--------QDIFIGAKKILPENHI 175 + +Q + Q + + + + + I Sbjct: 149 VPAANFQAQVTLQTALNQTRPQLEEKNNIVYQQFDRKTSELARIFYARRYDGEQMRGLTI 208 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + V S IP Sbjct: 209 LDFTRGELSQIISAETGVWHPGDQLWEFRNGTIYGVAPDGSYSGIATFKSQEFTIPETPL 268 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNK-SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 S + +I + + + +N + E + + +P + VA LI AS+ Sbjct: 269 SIASQSRDETQMNATQIWQYLRVLRQTNNTADIRKWEVRLQQKLALPFVCVAFGLIGASL 328 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + F Y + + + G +G L + A P +L + + + + Sbjct: 329 GTAPNQRTGRATGFGISVLIIFSYYLLAFVTGALGINGTLPTLLAGWFPWLLGMGVGLYL 388 Query: 355 L 355 L Sbjct: 389 L 389 >gi|312170935|emb|CBX79194.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora ATCC BAA-2158] Length = 358 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 125/359 (34%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + + G+ Y++ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQ-GEYTVLGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDF 179 +A GE++ + Q G + W + + I L I+ Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERVRDDNQLSGISIYHFD 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + K ++ + + S + D Sbjct: 180 PQRRLKTVRYAASAKYNADKKLWELAQVDQSDLSDTQQINGNQTLSGEWKTSLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + S + + +S R + + I PL + M L+A S Sbjct: 240 VSLDPGALSISGLYSYSKYLKQSGQ-MAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I + P+ AL+P +LS+ +L+++ Sbjct: 299 RSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFALSVAMLVKR 357 >gi|319405492|emb|CBI79111.1| conserved membrane hypothetical protein [Bartonella sp. AR 15-3] Length = 363 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 122/360 (33%), Positives = 195/360 (54%), Gaps = 3/360 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF YLKTT FLLG ILV +ID E +++ LP Y+ +++ R PLII Sbjct: 5 TLGRYFFMLYLKTTCCFLLGVFILVLLIDFTENFSKLALLPYYTAKGAFLISLLRTPLII 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ+ PFI L I + +LN+ ELVI+R+IGIS WQ L P G+ L G+F++L INP+ Sbjct: 65 QQLFPFIALFSAITMLISLNKRLELVIARSIGISAWQFLTPACFGAFLFGLFSILFINPL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDI--IPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A ++ W+ N ++ IPW+ IGAK I+ ++ D T Sbjct: 125 AAWSSSQSEKIVAAWRSNNNQISISNTRIPWLTQHTNLGRTTIGAKSIIHKDLSLIDATF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ + + + A++ + L Y+ G+ P + + +K + ++ Sbjct: 185 VQYNENATVKNWINTKKAMLTDGAWLLINGTIYKIGQPPKKFSELRIKTHLKPEFLTEYL 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + FYE+ KK++ + + + + LI +P++LVAMTLIAA+VSL+ R Sbjct: 245 AEPVTIPFYELPKKIAVARSFG-YSANKFDMHLQSLIALPMLLVAMTLIAATVSLKIPRF 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q + ++ GI +GF+LY I +++SFG +G + P+ AA +PVI+ + I LL EDG Sbjct: 304 GQSKTLILGGIIAGFILYVISMLVRSFGNAGYIPPIIAAWVPVIVALFFGISFLLYTEDG 363 >gi|114048398|ref|YP_738948.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] gi|113889840|gb|ABI43891.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] Length = 352 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 124/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G +Y++ + VP Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVG-RGSYTMMDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ +A G+S Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPVAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VADIDKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 + + K+ + A A+ ND L V + + D Sbjct: 175 YKFNSELKLTNVVHAKSALFSNDSWHLMDVKRTDLSYDEVKLEHLDEDIWRSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + +N R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSIRGLMGYLDYLK-NNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAIAPSLLFTGIAFYFIRR 352 >gi|26987719|ref|NP_743144.1| permease YjgP/YjgQ family protein [Pseudomonas putida KT2440] gi|24982407|gb|AAN66608.1|AE016288_7 conserved hypothetical protein [Pseudomonas putida KT2440] gi|313497349|gb|ADR58715.1| Permease YjgP/YjgQ family protein [Pseudomonas putida BIRD-1] Length = 353 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 127/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L L + L + + + + Y++ P Sbjct: 1 MAK-LDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDLSDT--YTVMEAGNFVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ +L +SEL I RA G+SI +++ + ++L + +L+ Sbjct: 58 RRLYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + G+ Q S W + I + + + T Sbjct: 118 EYVAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHI-----NAVQPDGLLLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D + KI+ A A ND L V + + ++ + + Sbjct: 173 RYRFDSERKIVTSSFARRAQYQNDHWLLADVRTTYFRGDHTEVVNAPEERWDVSLTPELL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + + +N R F+ ++ P++ A+ L+A S Sbjct: 233 NTVILAPESLSITGLWDYIHYLSDQG-LNNSRYWLAFWTKVLQPMVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF+ ++ + P+ A +IP + + +L + Sbjct: 292 PLRSVTLGQRVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRR 351 >gi|225871810|ref|YP_002753264.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] gi|225794430|gb|ACO34520.1| permease, YjgP/YjgQ family [Acidobacterium capsulatum ATCC 51196] Length = 772 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 127/368 (34%), Gaps = 14/368 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P +L Y + +L+ + L+ ++L+ E+ + + S+ P Sbjct: 406 PLLLDEYVIREFLRVFVMVLVSFVMLMLFFTFFELVGDII-RNHSSLLVVGEYLIDLTPS 464 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I P L+ +VVF +NR+SE+ +A GIS+++++ P +V + L+ + Sbjct: 465 MIYLITPLAVLIAVLVVFGLMNRSSEITAMKATGISLYRIVLPIMVIASLMAVGLFFFNE 524 Query: 122 PIATSGEKIGIDLIQQWK----DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 + L + K + + IF N Sbjct: 525 YYVPQANRKQQALRNEIKGLPAQTTSHPGEQWMFGKREPGHPGMIFYYQYFDPDTNTFLN 584 Query: 178 DFTSITIDKKNKIIHRKDADL--AIIYNDKVKLKKVVEYQYGRIPIDKN-----STTLNI 230 + ++ R A + + + L+ + I +T + Sbjct: 585 LTVFEFDPQSFTLMKRTFAQMASWDQKDHRWILQDGWTRTFENHEIQSYQPFAVTTLPEM 644 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 F+K Q SF ++ ++ ++S F R Q + PL+ + M ++ Sbjct: 645 IETPHYFEKDFRQSTEMSFAQLRHYIADLSQSG-FDTVRLRVQLDRKLADPLITLVMAVL 703 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A +L + V+ I + I ++ G +L AA P IL Sbjct: 704 AVPFALSMGKRGSLA-GVSVAIGVAIAYWLISGTFEAMGDVSMLPAFLAAWSPDILFALA 762 Query: 351 SILILLQK 358 +LL+ Sbjct: 763 GTYLLLRT 770 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 113/366 (30%), Gaps = 8/366 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + L L ++F+ +L ++ + + S+ +P Sbjct: 1 MRILTRYILREILSHGLIGGALFTFVLFMPNLGDLLE-LAVRNSSSMGAVGEAFLLMLPN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +IP LV ++ L SE+ RA GI +W+ + V + ++ Sbjct: 60 IFVVVIPMSVLVGILLGLSRLAADSEVTAMRASGIGVWRFVGIVSVIACAAWGLGLVNSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + I L Q + + + + K + F + Sbjct: 120 YLAPWSSRQTIHLEQSLANAQASYEVQPRVFYEDFKNYVLYVEDVKAGRGAARWGKVFIA 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + I ++ I ++ L ++ + ++ + + Sbjct: 180 NLTNPDAPSITTAESATVINGPNQTILMRLHDGAQHQLSPTEPGDYNLSTFTETDVPLRT 239 Query: 242 EQFASRSFYEIIKKM------SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 F+ K++ +S+ + + P + + L+ + Sbjct: 240 GSQEDVRFHRTDKRILAMTNRELIERSHGKGGTWFFIELQKRLAYPTACLVLMLVGVPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + SR I F+ Y + + + + G + P+ + +L I +L Sbjct: 300 MS-SRRGGKSGGFVITIALVFIYYFLSSTGTALARQGKIPPLIGVWMANVLFAGCGIFLL 358 Query: 356 LQKEDG 361 Q G Sbjct: 359 RQMSTG 364 >gi|160876366|ref|YP_001555682.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861888|gb|ABX50422.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268556|gb|ADT95409.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 352 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 125/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G YS+ + VP Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVG-RGTYSMMDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ +A G+S Q+ + ++ L + +++ Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPIAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VENINKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 + + K+ + AD A+ D+ +L V + D Sbjct: 175 YKFNSELKLTNVVHADRAVFSQDRWRLFDVKSTDLSYEKVVLEYLEEDQWQSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + ++ R E + ++ P+ + M L+A S Sbjct: 235 VVSIKPEALSIRGLVGYLDYLKTNSQ-DPSRYELALWRKVMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFYFIRR 352 >gi|297537469|ref|YP_003673238.1| permease [Methylotenera sp. 301] gi|297256816|gb|ADI28661.1| permease YjgP/YjgQ family protein [Methylotenera sp. 301] Length = 356 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 136/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K + L +L + + DL + + +G+ +Y + + + P Sbjct: 1 MKILNKYLLKEIVSNVLMVMLALIAMFSFFDLIQELDALGK-GSYGLGKILLFVLLSAPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P LV + L R SELV+ R G+SI+ + + + I T L+ Sbjct: 60 HVYDVMPVAVLVGCMYSLGQLARYSELVVLRVSGLSIFDIAVLLLKIGAIFTIITFLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EK + + D+ Q+ W++ N ++ + + + Sbjct: 120 LVTPFSEKTAQRMRIKATDSVVAQEFRSGLWVKDGNSFINVEE-----VLPDATLLNIHI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK K+I ++A ++ KLK V + + + + + T + I+ + Sbjct: 175 FDFDKNAKLISTRNAKAGEFKHESWKLKDVTDTSFDKDSVKVSQSLEATWHSLIRPELLN 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + ++ + N R E + ++ PL + M ++A Sbjct: 235 VLLIMPEKMSAWNLYTYINHLSI-NKQKTTRYEVALWAKMIYPLACMVMVVLALPFGFVQ 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + GI G M + + G P+ +A++P I+ + + +L Sbjct: 294 QRAAGASTKIFVGIMLGVMYQILNRVFAHLGLLNDWPPLFSAIMPTIMFLMAGVAMLFYV 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|293393092|ref|ZP_06637407.1| YjgP/YjgQ family membrane protein [Serratia odorifera DSM 4582] gi|291424238|gb|EFE97452.1| YjgP/YjgQ family membrane protein [Serratia odorifera DSM 4582] Length = 356 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 133/362 (36%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + ++G+ YS + VP Sbjct: 1 MFGVLDRYIGKTIFNTIIMTLFMLVSLSGIIKFVDQLRKVGQ-GEYSALGAGMYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDVEIFFPMAALLGALLGLGQLATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + N I + + Sbjct: 120 EWVAPQGEQMARNYRAQQMYGGSLLSTKNGLWAKDGNDFIYIER-----VAGENELSGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 + + ++ + A A + +L +V + T + D Sbjct: 175 IYHFNDRRRLETVRYAATATFEDGAWQLSQVDTSDLTNEKQVTGTQTLTGVWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S + + + +S R + + I PL + M L+A S Sbjct: 235 LGVVALDPDSLSISGLHNYVKYLKQSGQ-EASRYQLNMWSKIFSPLSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + PV AL+P +L + +S+ +LL Sbjct: 294 GPLRSVPMGMRVVTGISFGFLFYVMDQIFGPLSLVYNMPPVLGALLPSLLFLLISVYLLL 353 Query: 357 QK 358 ++ Sbjct: 354 KR 355 >gi|294139611|ref|YP_003555589.1| hypothetical protein SVI_0840 [Shewanella violacea DSS12] gi|293326080|dbj|BAJ00811.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 352 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 132/359 (36%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + + LL L +I + +G +Y++ + +P Sbjct: 1 MKILDLYIARTLVSASALCLLILTGLSGIIKWVDQLRVVG-RGSYTMLDAGIYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ ++ G+S +Q+ + ++ L + +++ Sbjct: 60 DIEMFFPMAVLLGALIGMGTLASGSELVVMQSAGLSRFQITLSAMKTAVPLMLMIMVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPAAERRANELQAFKVSGGSLIKSSRGIWAKDGDLFVNIGE-----VENINRLHNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 D ++ A+ + ND +L V + + + + + D Sbjct: 175 YEFDSTLTLVKTIHAERGVYSNDHWRLIDVRQTDLTKDKVTLTDLTLYRWDSTLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S ++ + + +N + R E + I+ P+ + M L+A S Sbjct: 235 VVSVKPESLSIQGLMGYLDYLKVNNQ-DSGRYELALWRKIMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A++P ++ +++I + + Sbjct: 294 LRTVTMGARVLLGVIAGFTFYISSEIFGPLTLVYGLPAFLGAVMPALIFSTIAIYFIRK 352 >gi|17231561|ref|NP_488109.1| hypothetical protein alr4069 [Nostoc sp. PCC 7120] gi|17133204|dbj|BAB75768.1| alr4069 [Nostoc sp. PCC 7120] Length = 371 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 118/367 (32%), Gaps = 16/367 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY L T L+ + + ID + +S + ++P I Sbjct: 2 DRYLTSELLPTFLFGVGAFSSIGVTIDAVFELVRRVVESGLPVSIAVQVFLLKLPNFIVL 61 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 P TL+ ++ + L+ SEL+ R G+S+++++ V+ S ++ T L IA Sbjct: 62 AFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVMTAVMLSFVVTGLTFLFNEQIAP 121 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + + + + + Q+ +IL + F + Sbjct: 122 AANYQATLTLDKALKSDKPTFKQQNIFYPEYRDIQEKDGTKNRILTRLFYADQFDGKRMK 181 Query: 186 KKNKIIHRKDADL---------AIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLNIP 231 I D Y + R + L +P Sbjct: 182 GLTIIDRSTDGLNQIVVAESAEWNGAQSIWDFYNGTIYLVAPDRSYRNILRFEKQQLKLP 241 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLI 290 + S + + + + +++ R E + +P + V L+ Sbjct: 242 RTPLSLAEQSRDYGEMNIAQALDQLNIERLGGDRQKIRKLEVRIQQKFALPFVCVVFGLV 301 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A++ R+ + + F Y + I + G++GI P A +P + + + Sbjct: 302 GAAMGTIPQRTGK-GTSFGISVIVIFSYYLLGFITGALGQAGIFSPFIGAWLPNFIGLGV 360 Query: 351 SILILLQ 357 I +L++ Sbjct: 361 GIFLLVR 367 >gi|75907859|ref|YP_322155.1| permease YjgP/YjgQ [Anabaena variabilis ATCC 29413] gi|75701584|gb|ABA21260.1| permease YjgP/YjgQ [Anabaena variabilis ATCC 29413] Length = 391 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 121/369 (32%), Gaps = 16/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY L T L+ + + ID + +S + ++P I Sbjct: 20 IMDRYLTSELLPTFLFGVGAFSSIGVTIDAVFELVRRVVESGLPVSIAVQVFLLKLPNFI 79 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SEL+ R G+S+++++ V+ S ++ T L I Sbjct: 80 VLAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVMTAVMLSFVVTGLTFLFNEQI 139 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + + + + + + Q+ +IL + F Sbjct: 140 APAANYQATLTLDKALKSDKPKLKQQNIFYPEYRDIQEKDGTKNRILTRLFYADQFDGKQ 199 Query: 184 IDKKNKIIHRKDADL---------AIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLN 229 + I D Y + R + L Sbjct: 200 MKGLTIIDRSTDGLNQIVVAESAEWNGAQSIWDFYNGTIYLVAPDRSYRNILRFEKQQLK 259 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 +P + S + + + + +++ R E + +P + V Sbjct: 260 LPRTPLSLAEQSRDYGEMNIAQALDQLNIERLGGDRQKIRKLEVRIQQKFALPFVCVVFG 319 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 L+ A++ R+ + + F Y + I + G++G+ P A +P + + Sbjct: 320 LVGAAMGTIPQRTGK-GTSFGISVIVIFSYYLLGFITGALGQAGVFSPFIGAWLPNFIGL 378 Query: 349 SLSILILLQ 357 + I +L++ Sbjct: 379 GVGIFLLVR 387 >gi|296532232|ref|ZP_06894979.1| permease YjgP/YjgQ family protein [Roseomonas cervicalis ATCC 49957] gi|296267439|gb|EFH13317.1| permease YjgP/YjgQ family protein [Roseomonas cervicalis ATCC 49957] Length = 369 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 83/365 (22%), Positives = 161/365 (44%), Gaps = 8/365 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + + L + LV + D E+ + + + A +AA R+P ++ Sbjct: 6 TLSAYIARRFAGMALAMVAALAALVALFDFIELLRRAATRADAGFALVASIAALRLPYVV 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QI+PF L+ IV F+ L+R SELV++RA G+S W L V+ ++ +G + V++P+ Sbjct: 66 LQILPFAVLLGGIVAFWRLSRASELVVARAAGVSAWSFLLGPVLVALAMGTLAITVVSPL 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG-------AKKILPENHIW 176 + + L + N S + + + + G ++ + + Sbjct: 126 SAAMMARAERLDATYLRNATGLSSLAGGKLWLRQADESVEPGGVAILAGVPEVGRDGFLL 185 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + ++ I R +A LA + L++ V + R P+ + L + D Sbjct: 186 RGASLWRFSATDRPIGRAEAPLARLEPGAWVLQEAVSFGRDRQPLPAATLRLPTSLTPDR 245 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 ++ + SF+ + ++ + F R F+ L+ +PL+ AM L+AA S+ Sbjct: 246 IEETFASPDTLSFWALPGFIAVLESAG-FSAVRHRLTFHSLLSLPLLAAAMALLAAGFSM 304 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +R ++ GI +GF L+ + + + FG++G L AA P + + ++ +LL Sbjct: 305 RHARRGGVGRMLGLGIAAGFALFLLDKVAEEFGQAGTLPVALAAWAPSVAGLLFALTLLL 364 Query: 357 QKEDG 361 EDG Sbjct: 365 YTEDG 369 >gi|218551559|ref|YP_002385351.1| hypothetical protein EFER_4344 [Escherichia fergusonii ATCC 35469] gi|218359101|emb|CAQ91762.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324112113|gb|EGC06091.1| inner membrane protein yjgQ [Escherichia fergusonii B253] gi|325499820|gb|EGC97679.1| hypothetical protein ECD227_3917 [Escherichia fergusonii ECD227] Length = 360 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + I + F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQEGLWAKDGKNFVYIERVKGEKELGGISIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSIRYAASATFDPDNKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L+++ Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRR 359 >gi|85060085|ref|YP_455787.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] gi|84780605|dbj|BAE75382.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] Length = 356 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 78/361 (21%), Positives = 137/361 (37%), Gaps = 11/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I E ++G+ YS + +P Sbjct: 1 MFGVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVEQLRKVGQ-GGYSALGAGLFTLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ +L SELV+ +A G S Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMSALLGALLGLGSLATRSELVVMQASGFSRMQVAGSVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +GE++ + Q G + W + N I + + Sbjct: 120 EWVAPAGEQMAYNYRTQMIYGGSMLSTQNGLWAKDGNDFIFIER-----VVGSDELAGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 DK +++ + A A N KL +V E T + D Sbjct: 175 IYHFDKADRLQSLRYAATATFSNGSWKLSQVDESDLTNDKQITGRQTLNGEWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S S + +++ +S N R + + I P + M L+A S Sbjct: 235 LGVVALEPNSLSISGLYNYVNYLKQSGQESN-RYQLNMWSKIFSPFSVAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + V GI GF+ Y + I + PV AL+P + + +SI++LL Sbjct: 294 GPLRSVPMGVRVVIGISFGFLFYVLDQIFGPLSLVYNMPPVFGALLPSMAFLIISIVMLL 353 Query: 357 Q 357 + Sbjct: 354 R 354 >gi|188532529|ref|YP_001906326.1| Inner membrane protein [Erwinia tasmaniensis Et1/99] gi|188027571|emb|CAO95418.1| Inner membrane protein [Erwinia tasmaniensis Et1/99] Length = 358 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 126/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + + G+ Y++ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQ-GEYTVLGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + + I F Sbjct: 120 EFVAPQGEQMARNFRAQQLVGGSLLSTQSGLWAKDGDNFVFIERIRDDSQLSGISIYSFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + + + ++ + +I + S + D Sbjct: 180 HDRRLQTVRYAASAKYNADKKLWELAQVDQSDLTDAQQIKGSQTLSGEWKTTLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +S R + + I PL + M L+A S Sbjct: 240 VALDPGALSISGLYSYSKYLQQSGQ-MAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I + PV AL+P LS+ +L+++ Sbjct: 299 RSVSMGMRVITGISFGFLFYVLDQIFGPLSLVYNIPPVLGALLPSAAFFVLSVAMLIKR 357 >gi|292486866|ref|YP_003529736.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora CFBP1430] gi|292900737|ref|YP_003540106.1| permease [Erwinia amylovora ATCC 49946] gi|291200585|emb|CBJ47716.1| putative permease [Erwinia amylovora ATCC 49946] gi|291552283|emb|CBA19320.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia amylovora CFBP1430] Length = 358 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 126/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + + G+ Y++ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQ-GEYTVLGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGTLAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI-FIGAKKILPENHIWEDF 179 +A GE++ + Q G + W + + I + L I+ Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERMRDDNQLSGISIYHFD 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + K ++ + + S + D Sbjct: 180 PQRRLKTVRYAASAKYNADKKLWELAQVDQSDLSDTQQINGNQTLSGEWKTSLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + S + + +S R + + I PL + M L+A S Sbjct: 240 VSLDPGALSISGLYSYSKYLKQSGQ-MAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I + P+ AL+P +LS+ +L+++ Sbjct: 299 RSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFALSVAMLVKR 357 >gi|195940456|ref|ZP_03085838.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|295097698|emb|CBK86788.1| Predicted permeases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 360 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + I F + Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGQNFVYIERVKGDDELGGVSIYAFNN 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 DRRLQSVRYAASAKFDANNKLWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +LL++ Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWMLLKR 359 >gi|310766280|gb|ADP11230.1| Inner membrane protein [Erwinia sp. Ejp617] Length = 358 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 129/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + + G+ Y++ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQ-GEYTVLGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + + I +F Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERIRDDNQLSGISIYNFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 K + + + ++ + +I + S N + D Sbjct: 180 HERRLKTVRYAASAKYNADKKLWELAQVDQSDLSDAQQIKGSQTLSGEWNTTLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +S R + + I PL + M L+A S Sbjct: 240 VALDPGALSISGLYSYSKYLKQSGQ-MAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I + P+ AL+P ++S+ +L+++ Sbjct: 299 RSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFAISLAMLVKR 357 >gi|113971160|ref|YP_734953.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|113885844|gb|ABI39896.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] Length = 352 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 123/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G +YS+ + VP Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVG-RGSYSMMDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ +A G+S Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPVAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VADIDKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 + + K+ + A A+ D L V + + D Sbjct: 175 YKFNSELKLTNVVHAKSALFSKDSWHLMDVKRTDLSYEEVKLEHLDEDIWRSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + +N R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSIRGLMGYLDYLK-NNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSMVYELPAYVGAIAPSLLFTGIAFYFIRR 352 >gi|187731850|ref|YP_001882954.1| putative permease [Shigella boydii CDC 3083-94] gi|187428842|gb|ACD08116.1| putative permease [Shigella boydii CDC 3083-94] Length = 360 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|283834897|ref|ZP_06354638.1| membrane protein, YjgP/YjgQ family [Citrobacter youngae ATCC 29220] gi|291069157|gb|EFE07266.1| membrane protein, YjgP/YjgQ family [Citrobacter youngae ATCC 29220] Length = 360 Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + P Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDAMGAGLYTLLSAPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + + I F Sbjct: 123 WVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGDSFVYIERVKGDAELGGISIYSFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 KRRLQSVRYAASATFDPEQKIWRLSQVDESNLQDPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + + PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKVFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMLRK 359 >gi|259907067|ref|YP_002647423.1| Inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|224962689|emb|CAX54144.1| Inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|283476867|emb|CAY72716.1| beta-lactamase/D-alanine carboxypeptidase ampH [Erwinia pyrifoliae DSM 12163] Length = 358 Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 129/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY K T + L + L +I + + G+ Y++ + VP Sbjct: 1 MFGVLDRYIGKTIFNTIMATLFMLVSLSGIIKFVDQLRKTGQ-GEYTVLGAGLYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 60 KDIEIFFPMAALLGALLGLGALAQRSELVVMQASGFTRMQIAASVMKTAIPLVLLTMAIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + + I +F Sbjct: 120 EFVAPQGEQMARNYRAQQLMGGSLLSTQSGLWAKDGDNFIFIERIRDGNQLSGISIYNFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 K + + + ++ + +I + S N + D Sbjct: 180 HERRLKTVRYAASAKYNADKKLWELAQVDQSDLSDAQQIKGSQTLSGEWNTTLTPDKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +S R + + I PL + M L+A S Sbjct: 240 VALDPGALSISGLYSYSKYLKQSGQ-MAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI GF+ Y + I + P+ AL+P ++S+ +L+++ Sbjct: 299 RSVSMGMRVVTGISFGFLFYVLDQIFGPLSLVYNIPPILGALLPSAAFFAISLAMLVKR 357 >gi|304410147|ref|ZP_07391766.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302142|ref|ZP_07581900.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351556|gb|EFM15955.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914180|gb|EFN44601.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 352 Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 124/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G YS+ + VP Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVG-RGTYSMMDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ +A G+S Q+ + ++ L + +++ Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITMSAMKTAVPLMLLVMVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + T Sbjct: 120 WGAPIAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VENISKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 + + K+ + AD A+ D+ +L V + D Sbjct: 175 YKFNSELKLTNVVHADRAVFSQDRWRLFDVKRTDLSYEKVVLEYLEEDQWQSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + ++ R E + ++ P+ + M L+A S Sbjct: 235 VVSIKPEALSIRGLVGYLDYLKTNSQ-DPSRYELALWRKVMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAVAPSLLFTGVAFYFIRR 352 >gi|224586303|ref|YP_002640102.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470831|gb|ACN48661.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 360 Score = 142 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYVFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDSDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|163750107|ref|ZP_02157350.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] gi|161330164|gb|EDQ01146.1| hypothetical protein KT99_20606 [Shewanella benthica KT99] Length = 352 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 134/359 (37%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + ++ LL L +I + +G NY++ + +P Sbjct: 1 MKILDLYIARTLVSSSALCLLILTGLSGIIKWVDQLRVVG-RGNYTMLDAGIYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ ++ G+S +Q+ + ++ L + +++ Sbjct: 60 DIEIFFPMAVLLGALIGMGMLASGSELVVMQSAGLSRFQITLSAMKTAVPLMLMIMVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPAAERRANELQAFKVSGGSLIKSSRGIWAKDGDLFVNIGE-----VENINSLRNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 D ++ A+ + ND +L V + + + + + D Sbjct: 175 YEFDSTLTLVKTIHAERGVYSNDHWRLLDVRQIDLTKDKVTLTDLTLYRWDSTLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S ++ + + +N ++ R E + I+ P+ + M L+A S Sbjct: 235 VVSVKPESLSIQGLLGYLDYLE-ANNQNSGRYELALWRKIMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +GF Y I L A++P ++ S++I + + Sbjct: 294 LRSVTMGARVLLGVIAGFTFYISSEIFGPLTLVYGLPAFLGAVMPALIFSSVAIYFIRK 352 >gi|62182906|ref|YP_219323.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62130539|gb|AAX68242.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717409|gb|EFZ08980.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 360 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAISLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYVFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 359 >gi|194337384|ref|YP_002019178.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309861|gb|ACF44561.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] Length = 359 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 135/356 (37%), Gaps = 6/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y + K L+ + L +I++ E ++ + + + +P Sbjct: 1 MKILNKYILGQFAKAFLFTSIAFACLFILINMVEKLDEFIDKK-LGLWQIVHYYLLSIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ + P L+ +I+V L+ + EL R+ G+S+ QLL PF+ G +L+ +F +L Sbjct: 60 ILLVVSPVSALLSSILVAGKLSFSGELPAIRSAGVSMRQLLTPFITGGVLILLFNLLNAG 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I+ S Q++ Q + + + + IG + I Sbjct: 120 WISPSTFAEKNHFEQRYLKRNPAQPQENRNIHILEPGNRMLSIGTLD-PDQAEISAVSIE 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 + K D+ + L + + + T++ + + Sbjct: 179 EFSGARLKSRTDADSMRYNQKTGEWILLNAAKRSFTGKDETFHLTPVTSVKLALSPRSLS 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + Q + + ++ + R+ +F+ I +P + + LI +S + Sbjct: 239 ELNLQPDEMNLIRHYRYLTEKEGAGFAGLERSTVKFHNKIALPFASLIIILIGVPLSAKK 298 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R ++ +F+GF+ + + G G++ P+ AA +P IL + + I Sbjct: 299 KR-GGLASEISITLFAGFLFMGVQKTIAIAGYQGMINPMLAAWLPNILFLGIGYAI 353 >gi|289523522|ref|ZP_06440376.1| membrane protein, YjgP/YjgQ family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503214|gb|EFD24378.1| membrane protein, YjgP/YjgQ family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 369 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 125/358 (34%), Gaps = 7/358 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L ++ + T ++ ++ +L+ DL + S L R+P Sbjct: 8 FRLLDKFIITEFYPTFVFGVMVFTVLLVAGDLLFDIADLLIQSRVPFSIVIRLFVYRLPG 67 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +P L+ I+ F L SEL RA GIS +++L P + SIL+G F +L+ Sbjct: 68 VIVLTLPMAALLATILSFGKLATQSELTALRASGISFYRILRPVFLASILIGGFALLLNE 127 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ ++++ +++ + L D Sbjct: 128 TLVPLADRAADNIMRYEVARQKPSLLKEQMFLKEERDGALSRVIYIGKLFPQEGNMDDVL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-----YGRIPIDKNSTTLNIPIKMDG 236 I + +I A + L + + L++P+ Sbjct: 188 IQEFESGEITRILTAKNGDWKEGQWWLYNGQVFNVTKEGFVEPLFSFEKQQLSLPLSPSQ 247 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S+ S +E+ + N + + +P V + L+ ASV Sbjct: 248 VVTSSQDPKKMSAFELYNYIKLMNVQGS-DVNSLWVLLHLRLAVPWASVVLALVGASVGA 306 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS + + I F Y ++ +S G+ G + P+ AA +P ++ + + Sbjct: 307 GTRRSGS-GMGIGVSILLVFAYYVFMSFCRSLGQGGYIPPLLAAWMPNLIFLVCGAFM 363 >gi|88859093|ref|ZP_01133734.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] gi|88819319|gb|EAR29133.1| hypothetical protein PTD2_08814 [Pseudoalteromonas tunicata D2] Length = 354 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 134/360 (37%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L+TT + LL + + +I E +G +Y + + +P Sbjct: 1 MKILDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKYVG-RGSYDVMTAGLYTLFSIPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P TL+ + L SELV+ +A G+S ++++ + ++++ + + + Sbjct: 60 DVVTFFPMATLIGGLTGLGALASNSELVVMQAAGLSRFEIIRSVMKTALVMALCVMAMGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +K +L G + W + + +I + +N Sbjct: 120 WGVPEAQKQAKELRTYAISGGSIFNARQGVWAKDGDVFLNIDN-----VDDNGQLNGLKM 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +K ++ +A AI + D LK V + + +T + D Sbjct: 175 YQFNKSLDLVAITNAQSAISHRDGWLLKGVKTIYLDEQEVRQENTKEQLYVSELTPDKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S SF +I + + N E + ++ P+ + M L+A S Sbjct: 235 IVSLKAESLSFTGLIGYLDYLK-KNEQDTSSYELALWRKLMQPVSIAVMLLVALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G+ +G + + I L PV A+ P +L I +SI ++ ++ Sbjct: 294 LRSVSMGARIVMGVITGIVFHLSDKIFGPIVLVYELSPVVGAVFPSLLFIGISIYLIKKR 353 >gi|209964086|ref|YP_002297001.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209957552|gb|ACI98188.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 359 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 143/362 (39%), Gaps = 7/362 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RY + +L +L L+ L+ ++DL + +++ E + A R+P Sbjct: 1 MTGTLARYLSRQFLVRSLAVLVALTALLQLLDLLDAASRVLERGGA-LGDLGTYALLRLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+++++P LV ++ + L + +E+V R+ G++ +QLL + ++ + +F +++ Sbjct: 60 SIVERLVPLAVLVGSLTTLYGLVQNNEIVAMRSAGLTPYQLLATLMPAAVAIAVFHLILS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + IA E+ + + + D + + + +++L E + Sbjct: 120 DQIAPRAERAFLTWWAETEPPTDDDLPLAEKKLWLRVGNTIVAA--ERVLERGARLEQVS 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D + ++ R A A+ + L R + + Sbjct: 178 LYPRDDQGRVTERTRAAAAVYGDGNWTLLDGTRLDLTRGDFKAEPFARAPWPVRLHPANV 237 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + + + + + ET+ + PL + M L+AA V+ Sbjct: 238 VEVLQPTENIPLLRL-RSILRGDWAGRQSPAYYETRLHETYAGPLATLIMVLLAAPVAHG 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS +A GI G ++ + G++G + V AA P + ++ IL+ Sbjct: 297 MRRSGAVGGSMALGIGIGLTYLLADGMLAALGEAGAMPAVIAAWAPTVFFAAVGGAILVH 356 Query: 358 KE 359 E Sbjct: 357 VE 358 >gi|117921443|ref|YP_870635.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] gi|117613775|gb|ABK49229.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] Length = 352 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 123/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G +Y++ + VP Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVG-RGSYTMMDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ +A G+S Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPVAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VADIDKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 + + K+ + A A+ D L V + + D Sbjct: 175 YKFNSELKLTNVVHAKSALFSKDSWHLMDVKRTDLSYDEVKLEHLDEDIWRSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + +N R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSIRGLMGYLDYLK-NNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSMVYELPAYVGAIAPSLLFTGIAFYFIRR 352 >gi|91774576|ref|YP_544332.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] gi|91708563|gb|ABE48491.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] Length = 356 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 133/361 (36%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + + + +L + + DL + +G+ NY IS+ + P Sbjct: 1 MKLLNRYLAQEIVSSIMLIMLALLAMFSFFDLIQELESLGK-GNYGISKVLLYVLLSAPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P LV + +R SEL+I R GISI ++ + ++ + T LV Sbjct: 60 HVYEVVPVAVLVGTMYALGQFSRYSELIILRVSGISIRKIAFSLLRVGLVFAVITFLVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA EK + Q D+ Q W++ N ++ D Sbjct: 120 LIAPMSEKAAQRIRIQATDSVVAQDFRSGLWVKDGNSFVNVQNVMPDAS-----LMDIHI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 D + ++ +A + L +V + + I N T I+ + Sbjct: 175 YEFDNEFRLRTISNAKEGSFDGNSWNLHQVTQTHFEEQKIRTNVFQEATWQSLIRPELLN 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + ++ SN R + + ++ PL + M ++A Sbjct: 235 VLLVVPEKMSAWNLYFYINHL-ASNKQKTSRHQIALWSKMIYPLACLVMVILALPFGFLQ 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS+ + GI G + + + G P+ +A++P +L ++ I +L Sbjct: 294 QRSSSASTKIFSGIMLGIVYQVLNRVFVHLGLLNDWSPLFSAVMPTLLFMAAGIFMLYWV 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|309784105|ref|ZP_07678747.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|308928098|gb|EFP73563.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 360 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A GE++ + Q G + W + N I F Sbjct: 123 WAAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|193069794|ref|ZP_03050744.1| putative permease [Escherichia coli E110019] gi|192956848|gb|EDV87301.1| putative permease [Escherichia coli E110019] Length = 360 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSAAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|157374155|ref|YP_001472755.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] gi|157316529|gb|ABV35627.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] Length = 352 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 129/359 (35%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + ++ LL L +I + +G +Y++ + +P Sbjct: 1 MRILDLYIARTIVSSSALCLLILTGLSGIIKWVDQLRLVG-RGSYTMLDAGIYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ L SELV+ ++ G+S WQ+ + +I L + + + Sbjct: 60 DLEMFFPLGVLLGALIGMGMLASNSELVVMQSSGLSRWQITLSAMKTAIPLMLLIMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + + + T Sbjct: 120 WGAPVAEQKANELQATKLSGGSLIKSSRGIWAKDGDLFVNIGE-----VEDINHLGNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 D+ ++ A+ + ND +L V + + + D Sbjct: 175 YEFDETLSLVRTIHAEHGVYSNDHWRLMDVRQTDLTEDKVTLTDLTLYRWESTLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S ++ + + +N + R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPESLSIQGLMGYLDYLKVNNQ-DSARYELALWRKLLQPVTVGVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I + A +P ++ + ++ + + Sbjct: 294 LRTVTMGARVLLGVIAGFSFYISSEIFGPLTLVYGVPAFIGAGMPAVIFSAGAVYFIRK 352 >gi|323965651|gb|EGB61105.1| inner membrane protein yjgQ [Escherichia coli M863] gi|327250208|gb|EGE61927.1| hypothetical protein ECSTEC7V_5012 [Escherichia coli STEC_7v] Length = 360 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLESVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|38704251|ref|NP_313266.2| hypothetical protein ECs5239 [Escherichia coli O157:H7 str. Sakai] gi|89110978|ref|AP_004758.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|90111715|ref|NP_418683.4| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|110644621|ref|YP_672351.1| putative membrane protein YjgQ [Escherichia coli 536] gi|157155171|ref|YP_001465771.1| putative permease [Escherichia coli E24377A] gi|157163737|ref|YP_001461055.1| putative permease [Escherichia coli HS] gi|168749566|ref|ZP_02774588.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|168754844|ref|ZP_02779851.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|168760517|ref|ZP_02785524.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|168766553|ref|ZP_02791560.1| putative permease [Escherichia coli O157:H7 str. EC4486] gi|168774016|ref|ZP_02799023.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|168782789|ref|ZP_02807796.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|168784912|ref|ZP_02809919.1| putative permease [Escherichia coli O157:H7 str. EC869] gi|168797842|ref|ZP_02822849.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|170021730|ref|YP_001726684.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|170083701|ref|YP_001733021.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681768|ref|YP_001746666.1| putative permease [Escherichia coli SMS-3-5] gi|188493811|ref|ZP_03001081.1| putative permease [Escherichia coli 53638] gi|191168708|ref|ZP_03030487.1| putative permease [Escherichia coli B7A] gi|193063693|ref|ZP_03044781.1| putative permease [Escherichia coli E22] gi|194426570|ref|ZP_03059124.1| putative permease [Escherichia coli B171] gi|194437817|ref|ZP_03069912.1| putative permease [Escherichia coli 101-1] gi|195937288|ref|ZP_03082670.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208808552|ref|ZP_03250889.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208812170|ref|ZP_03253499.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208821551|ref|ZP_03261871.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209396919|ref|YP_002273807.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|217326107|ref|ZP_03442191.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218556809|ref|YP_002389723.1| hypothetical protein ECIAI1_4493 [Escherichia coli IAI1] gi|218561420|ref|YP_002394333.1| hypothetical protein ECS88_4849 [Escherichia coli S88] gi|218692649|ref|YP_002400861.1| hypothetical protein ECED1_5115 [Escherichia coli ED1a] gi|218698010|ref|YP_002405677.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218702965|ref|YP_002410594.1| hypothetical protein ECIAI39_4735 [Escherichia coli IAI39] gi|218707868|ref|YP_002415387.1| hypothetical protein ECUMN_4794 [Escherichia coli UMN026] gi|227886684|ref|ZP_04004489.1| inner membrane protein [Escherichia coli 83972] gi|238903363|ref|YP_002929159.1| conserved inner membrane protein [Escherichia coli BW2952] gi|253775115|ref|YP_003037946.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164187|ref|YP_003047297.1| inner membrane protein [Escherichia coli B str. REL606] gi|254796282|ref|YP_003081119.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256019914|ref|ZP_05433779.1| conserved inner membrane protein [Shigella sp. D9] gi|256025198|ref|ZP_05439063.1| conserved inner membrane protein [Escherichia sp. 4_1_40B] gi|260847093|ref|YP_003224871.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260858414|ref|YP_003232305.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|260871014|ref|YP_003237416.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261225381|ref|ZP_05939662.1| conserved inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255366|ref|ZP_05947899.1| inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|293402887|ref|ZP_06646984.1| membrane protein [Escherichia coli FVEC1412] gi|293407982|ref|ZP_06651822.1| conserved hypothetical protein [Escherichia coli B354] gi|293417762|ref|ZP_06660384.1| lipopolysaccharide export system permease lptG [Escherichia coli B185] gi|293476565|ref|ZP_06664973.1| lipopolysaccharide export system permease lptG [Escherichia coli B088] gi|298378413|ref|ZP_06988297.1| lipopolysaccharide export system permease lptG [Escherichia coli FVEC1302] gi|300818513|ref|ZP_07098722.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300821369|ref|ZP_07101517.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300899412|ref|ZP_07117667.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300906110|ref|ZP_07123829.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300916358|ref|ZP_07133100.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300923940|ref|ZP_07139950.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300928088|ref|ZP_07143636.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|300950208|ref|ZP_07164149.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300957115|ref|ZP_07169356.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300972387|ref|ZP_07171920.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300988160|ref|ZP_07178580.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|301024382|ref|ZP_07188070.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|301050052|ref|ZP_07196964.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|301304685|ref|ZP_07210793.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301325193|ref|ZP_07218717.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|301643390|ref|ZP_07243440.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|306815520|ref|ZP_07449669.1| Inner membrane protein yjgQ [Escherichia coli NC101] gi|307140957|ref|ZP_07500313.1| Inner membrane protein yjgQ [Escherichia coli H736] gi|307312963|ref|ZP_07592591.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|309792903|ref|ZP_07687331.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|312965943|ref|ZP_07780169.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312973920|ref|ZP_07788091.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331645011|ref|ZP_08346128.1| inner membrane protein YjgQ [Escherichia coli H736] gi|331650395|ref|ZP_08351467.1| inner membrane protein YjgQ [Escherichia coli M605] gi|331656096|ref|ZP_08357084.1| inner membrane protein YjgQ [Escherichia coli M718] gi|331660843|ref|ZP_08361775.1| inner membrane protein YjgQ [Escherichia coli TA206] gi|331665931|ref|ZP_08366825.1| inner membrane protein YjgQ [Escherichia coli TA143] gi|331671170|ref|ZP_08372003.1| inner membrane protein YjgQ [Escherichia coli TA271] gi|331671403|ref|ZP_08372201.1| inner membrane protein YjgQ [Escherichia coli TA280] gi|331680400|ref|ZP_08381059.1| inner membrane protein YjgQ [Escherichia coli H591] gi|331681282|ref|ZP_08381919.1| inner membrane protein YjgQ [Escherichia coli H299] gi|83288182|sp|P0ADC7|LPTG_ECOL6 RecName: Full=Lipopolysaccharide export system permease protein lptG gi|83288183|sp|P0ADC6|LPTG_ECOLI RecName: Full=Lipopolysaccharide export system permease protein lptG gi|31323181|gb|AAP43525.1| YjgQ [Escherichia coli B] gi|85677009|dbj|BAE78259.1| conserved inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|87082400|gb|AAC77219.2| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|110346213|gb|ABG72450.1| putative membrane protein YjgQ [Escherichia coli 536] gi|157069417|gb|ABV08672.1| putative permease [Escherichia coli HS] gi|157077201|gb|ABV16909.1| putative permease [Escherichia coli E24377A] gi|169756658|gb|ACA79357.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|169891536|gb|ACB05243.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170519486|gb|ACB17664.1| putative permease [Escherichia coli SMS-3-5] gi|187770216|gb|EDU34060.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|188016197|gb|EDU54319.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|188489010|gb|EDU64113.1| putative permease [Escherichia coli 53638] gi|188999755|gb|EDU68741.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|189357825|gb|EDU76244.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|189364202|gb|EDU82621.1| putative permease [Escherichia coli O157:H7 str. EC4486] gi|189368974|gb|EDU87390.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|189375169|gb|EDU93585.1| putative permease [Escherichia coli O157:H7 str. EC869] gi|189379540|gb|EDU97956.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|190901256|gb|EDV61026.1| putative permease [Escherichia coli B7A] gi|192930680|gb|EDV83286.1| putative permease [Escherichia coli E22] gi|194415309|gb|EDX31577.1| putative permease [Escherichia coli B171] gi|194423313|gb|EDX39305.1| putative permease [Escherichia coli 101-1] gi|208728353|gb|EDZ77954.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208733447|gb|EDZ82134.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208741674|gb|EDZ89356.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209158319|gb|ACI35752.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|217322328|gb|EEC30752.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218354742|emb|CAV01806.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218363578|emb|CAR01235.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|218368189|emb|CAR05997.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218372951|emb|CAR20832.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] gi|218430213|emb|CAR11214.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|218434965|emb|CAR15906.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|222036034|emb|CAP78779.1| Inner membrane protein yjgQ [Escherichia coli LF82] gi|227836257|gb|EEJ46723.1| inner membrane protein [Escherichia coli 83972] gi|238860250|gb|ACR62248.1| conserved inner membrane protein [Escherichia coli BW2952] gi|242379782|emb|CAQ34609.1| LptG, subunit of LptABCFG ABC transporter [Escherichia coli BL21(DE3)] gi|253326159|gb|ACT30761.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976090|gb|ACT41761.1| conserved inner membrane protein [Escherichia coli B str. REL606] gi|253980246|gb|ACT45916.1| conserved inner membrane protein [Escherichia coli BL21(DE3)] gi|254595682|gb|ACT75043.1| conserved inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257757063|dbj|BAI28565.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257762240|dbj|BAI33737.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257767370|dbj|BAI38865.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|260450918|gb|ACX41340.1| permease YjgP/YjgQ family protein [Escherichia coli DH1] gi|281181360|dbj|BAI57690.1| conserved hypothetical protein [Escherichia coli SE15] gi|284924432|emb|CBG37557.1| putative permease [Escherichia coli 042] gi|291321018|gb|EFE60460.1| lipopolysaccharide export system permease lptG [Escherichia coli B088] gi|291429802|gb|EFF02816.1| membrane protein [Escherichia coli FVEC1412] gi|291430480|gb|EFF03478.1| lipopolysaccharide export system permease lptG [Escherichia coli B185] gi|291472233|gb|EFF14715.1| conserved hypothetical protein [Escherichia coli B354] gi|298280747|gb|EFI22248.1| lipopolysaccharide export system permease lptG [Escherichia coli FVEC1302] gi|300298210|gb|EFJ54595.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|300305970|gb|EFJ60490.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|300316133|gb|EFJ65917.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300356990|gb|EFJ72860.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300396608|gb|EFJ80146.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|300402053|gb|EFJ85591.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300410966|gb|EFJ94504.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300416318|gb|EFJ99628.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300419818|gb|EFK03129.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300450448|gb|EFK14068.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300463885|gb|EFK27378.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|300526258|gb|EFK47327.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300528917|gb|EFK49979.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300840035|gb|EFK67795.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|300847954|gb|EFK75714.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|301078220|gb|EFK93026.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|305851182|gb|EFM51637.1| Inner membrane protein yjgQ [Escherichia coli NC101] gi|306907131|gb|EFN37638.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|307556432|gb|ADN49207.1| putative membrane protein YjgQ [Escherichia coli ABU 83972] gi|308123189|gb|EFO60451.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|309704766|emb|CBJ04117.1| putative permease [Escherichia coli ETEC H10407] gi|310331454|gb|EFP98710.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|312289186|gb|EFR17080.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312948915|gb|ADR29742.1| inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315063569|gb|ADT77896.1| conserved inner membrane protein [Escherichia coli W] gi|315138813|dbj|BAJ45972.1| inner membrane protein yjgQ [Escherichia coli DH1] gi|315255621|gb|EFU35589.1| putative inner membrane protein [Escherichia coli MS 85-1] gi|315293627|gb|EFU52979.1| putative inner membrane protein [Escherichia coli MS 153-1] gi|315298979|gb|EFU58233.1| putative inner membrane protein [Escherichia coli MS 16-3] gi|320639019|gb|EFX08665.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H7 str. G5101] gi|320644389|gb|EFX13454.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H- str. 493-89] gi|320649706|gb|EFX18230.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H- str. H 2687] gi|320655103|gb|EFX23064.1| lipopolysaccharide ABC transporter permease [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660609|gb|EFX28070.1| lipopolysaccharide ABC transporter permease [Escherichia coli O55:H7 str. USDA 5905] gi|320665536|gb|EFX32582.1| lipopolysaccharide ABC transporter permease [Escherichia coli O157:H7 str. LSU-61] gi|323157529|gb|EFZ43638.1| hypothetical protein ECEPECA14_0586 [Escherichia coli EPECa14] gi|323162061|gb|EFZ47933.1| hypothetical protein ECE128010_1826 [Escherichia coli E128010] gi|323171708|gb|EFZ57354.1| hypothetical protein ECLT68_3917 [Escherichia coli LT-68] gi|323176177|gb|EFZ61769.1| hypothetical protein ECOK1180_4867 [Escherichia coli 1180] gi|323181996|gb|EFZ67407.1| hypothetical protein ECOK1357_4674 [Escherichia coli 1357] gi|323189856|gb|EFZ75134.1| hypothetical protein ECRN5871_1643 [Escherichia coli RN587/1] gi|323380351|gb|ADX52619.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] gi|323935384|gb|EGB31732.1| inner membrane protein yjgQ [Escherichia coli E1520] gi|323940180|gb|EGB36374.1| inner membrane protein yjgQ [Escherichia coli E482] gi|323945995|gb|EGB42033.1| inner membrane protein yjgQ [Escherichia coli H120] gi|323960303|gb|EGB55944.1| inner membrane protein yjgQ [Escherichia coli H489] gi|323970484|gb|EGB65743.1| inner membrane protein yjgQ [Escherichia coli TA007] gi|323975395|gb|EGB70496.1| inner membrane protein yjgQ [Escherichia coli TW10509] gi|324005135|gb|EGB74354.1| putative inner membrane protein [Escherichia coli MS 57-2] gi|324013726|gb|EGB82945.1| putative inner membrane protein [Escherichia coli MS 60-1] gi|324019239|gb|EGB88458.1| putative inner membrane protein [Escherichia coli MS 117-3] gi|324118823|gb|EGC12715.1| inner membrane protein yjgQ [Escherichia coli E1167] gi|331035986|gb|EGI08224.1| inner membrane protein YjgQ [Escherichia coli H736] gi|331040789|gb|EGI12947.1| inner membrane protein YjgQ [Escherichia coli M605] gi|331046450|gb|EGI18540.1| inner membrane protein YjgQ [Escherichia coli M718] gi|331051885|gb|EGI23924.1| inner membrane protein YjgQ [Escherichia coli TA206] gi|331056982|gb|EGI28976.1| inner membrane protein YjgQ [Escherichia coli TA143] gi|331061759|gb|EGI33685.1| inner membrane protein YjgQ [Escherichia coli TA271] gi|331071248|gb|EGI42605.1| inner membrane protein YjgQ [Escherichia coli TA280] gi|331071863|gb|EGI43199.1| inner membrane protein YjgQ [Escherichia coli H591] gi|331081503|gb|EGI52664.1| inner membrane protein YjgQ [Escherichia coli H299] gi|332083263|gb|EGI88494.1| hypothetical protein SB521682_5142 [Shigella boydii 5216-82] gi|332083781|gb|EGI88999.1| hypothetical protein SD15574_5323 [Shigella dysenteriae 155-74] gi|332346341|gb|AEE59675.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 360 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|294492514|gb|ADE91270.1| putative permease [Escherichia coli IHE3034] gi|307629338|gb|ADN73642.1| hypothetical protein UM146_21570 [Escherichia coli UM146] gi|315288387|gb|EFU47785.1| putative inner membrane protein [Escherichia coli MS 110-3] gi|323950669|gb|EGB46547.1| inner membrane protein yjgQ [Escherichia coli H252] gi|323955548|gb|EGB51312.1| inner membrane protein yjgQ [Escherichia coli H263] Length = 360 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAAAAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|284049007|ref|YP_003399346.1| permease YjgP/YjgQ family protein [Acidaminococcus fermentans DSM 20731] gi|283953228|gb|ADB48031.1| permease YjgP/YjgQ family protein [Acidaminococcus fermentans DSM 20731] Length = 363 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 122/363 (33%), Gaps = 7/363 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K ++ L+ + + Q S S L +P Sbjct: 1 MSILDKYILKQMMQPFLFGVAAFSTIFVASSFLFRVTQYITQYGASYSSLIRLFLCLMPE 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I P L+ ++ L+ SE+ R+ G+S ++ P + ++ +F+V+ Sbjct: 61 VINYTFPMSMLLAALLTMGQLSSNSEITAMRSGGLSFRRIAAPILAAGFVVSLFSVVWAE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + +I+ K ++ ++ + Q + + + E + Sbjct: 121 KVVPPAKSEYERIIKVEIKRDTKPRTQNHVLIKQVSKGQLVRLTYARTFDEKQGMMKDIT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP-----IDKNSTTLNIPIKMDG 236 I K+ + A ++ + + L I Sbjct: 181 IEDWDNGKVARIQRTPQAKWTQGTWIMEGGTITDLTGKDGVARTMTFDKQVLPISETPKA 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + E+ + + E + Y +PL LI + + Sbjct: 241 ITLDQKDPDQMTIGELKMYIDILK-RQYMPTSKYEMEIYRRFTVPLASFFFALIGVPLGV 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R+ + + + + F+ Y+I+T M G+ G++ P+ AA P +L + ++ Sbjct: 300 QSQRTG-ASMGLGFSVVIIFIYYSIMTFMTGLGQGGVIPPLLAAATPNLLCGAFGCWMIY 358 Query: 357 QKE 359 +K+ Sbjct: 359 KKD 361 >gi|94968543|ref|YP_590591.1| YjgP/YjgQ family protein [Candidatus Koribacter versatilis Ellin345] gi|94550593|gb|ABF40517.1| transporter, YjgP/YjgQ family [Candidatus Koribacter versatilis Ellin345] Length = 792 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 124/363 (34%), Gaps = 10/363 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P +L + +L + L ++L V E+ + + S+ P Sbjct: 430 PLLLDDMILRDFLLYFVMVLTTFVMLALVFTFFELLGDIVKNR-VSVVMLGDYLLNLSPS 488 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I + P L+ +V F + R++E+ +A GISI+++ P + + ++ + Sbjct: 489 LIYLMTPLSVLLAVLVTFGLMQRSNEITAMKATGISIYRVAFPVIAIAGVVAASLFVFDQ 548 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 K L + K + I I+ +N Sbjct: 549 LYIPKANKRQETLRNEIKGKPPQTYLRPDR-KWIFGSNNTIYYYEVYDADQNRFGGISIF 607 Query: 182 ITIDKKNKIIHRKDADLAIIYND--KVKLKKVVEYQYGRIPIDKN-----STTLNIPIKM 234 K + R A A + K ++ + I++ T Sbjct: 608 QFDPKTFALQSRIYAQHAHWEDGLQKWVFEQGWMRKLNGSAIEEFKPFEVETIALAAEPP 667 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 F+K Q + E+++ + +S F R Q Y + P++ + M ++A Sbjct: 668 AYFKKEVRQSQEMDYQELLRYIHDLQQSG-FDVVRFRVQLYKKLAYPIITLVMAILAIPF 726 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S+ R P VA I + + + ++ G + L + AA P ++ + + Sbjct: 727 SVYRQRRGGPLAGVATAIGIAILYWVSAGLFEAMGNANQLPALLAAWAPNLIFGFAAGYM 786 Query: 355 LLQ 357 +L+ Sbjct: 787 VLR 789 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 117/376 (31%), Gaps = 22/376 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY L L ++F+ DL + + + + A + +P + Sbjct: 5 ILTRYILGEVLSHGAIGLALFTFVIFMRDLGRLLE-LIVRNSAPLPSVAEIFFLTLPTAL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P LV ++ L+ SE+ R+ G+ + + S+ L I ++ + Sbjct: 64 TVTLPMAVLVGILIGLSRLSADSEVTAMRSSGLGSLFFVRIVSIFSVALWILALVNNLYV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK---ILPENHIWEDFT 180 A L + K + + + + +K ++ Sbjct: 124 APRSAAALAHLQDKLKSSQASFEVQPRVFYEDFKNYVLYVEDSKSGSGSALWRGVFLADV 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVE--------YQYGRIPIDKNSTTLNIPI 232 S K + R + + L+ + QY D+ + +P Sbjct: 184 STPSQPKITMAERGVVVAEGPNSLHLHLENGTQQETNPKDPTQYQVSTFDQTDIPIQLPE 243 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH---------NYRAETQFYFLIVIPLM 283 D A S E+ + S + +F I +P Sbjct: 244 TNDKPAPELVPVAELSTQELWRLAHSGGVSAGHYLGNSIAQVKARWYAVEFQRRIALPTA 303 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + +TL+ + L SR + I F Y + I S G+ G L P + Sbjct: 304 CLVLTLVGIPLGLS-SRRGGKSMGFVLTIILVFAYYVVSLIGVSLGRQGKLPPAVGVWMA 362 Query: 344 VILTISLSILILLQKE 359 ++ + I++L + + Sbjct: 363 NVVFLVAGIMLLHRVD 378 >gi|289209273|ref|YP_003461339.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] gi|288944904|gb|ADC72603.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] Length = 357 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 128/361 (35%), Gaps = 11/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY + L T ++ + L V + + G NY ++ + A +P Sbjct: 1 MTTVLGRYVIRQVLIGTTLAVVLLVALDAVFAMIDELRDTG-AGNYGVTEAMLYVALTLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P LV ++ NL SEL RA G+++ + + + +++ + +++ Sbjct: 60 RRMYEMLPPAALVGGLLWLGNLAANSELTAMRAAGMTLGRFIVWVLQAGLVVVMVMLIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A + E L + + + W + + + + + Sbjct: 120 EFFAPASETRAQALKASAF-DEEISVGSMGLWARDGQ-----RMIHAESVLAGNQLVGVR 173 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGF 237 I + A A + +L+ V + T++ I + F Sbjct: 174 IIEFTGDREPSWITRAARARFVDGDWRLEDVERSLLSHDRVVAEHRAEETIDRLIAPEYF 233 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + ++ + + + + N E F+ +P M L+A Sbjct: 234 DVLVVEPSQMAALDLSRYIDYLRE-NQLDAAPYEVAFWQRFTLPASTFVMLLLAIPFLFG 292 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + GI G ++ + G L P+ AA +PV+L +++++ L + Sbjct: 293 SQREGGAGQRLFIGIAIGVSFVIVMRAITHLGLVYNLPPLLAACLPVLLFLAIALFALRR 352 Query: 358 K 358 Sbjct: 353 M 353 >gi|260914417|ref|ZP_05920886.1| YjgP/YjgQ family membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631518|gb|EEX49700.1| YjgP/YjgQ family membrane protein [Pasteurella dagmatis ATCC 43325] Length = 358 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 134/361 (37%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + +P Sbjct: 3 MMNTLDRYLGKSILGAIFATLIMLVGLSGIIKFVEQFRLVGK-GTYDIWQAIAYTVLTMP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ +++ NL SEL++ +A G S ++ + +I L I T+ + Sbjct: 62 KDVETFFPMAALLGSLIALGNLASRSELIVMQASGFSRLKIGLAVMKTAIPLVIITMAIG 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + + D Sbjct: 122 EWGIPQTEQFARDMRSKAMTGGSLLSVRDGFWAKEGSDFIYVKRITDDLE-----LNDIY 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGF 237 + + ++ K AD A+ K L ++ E + I + ++ + D Sbjct: 177 IYSFGENRQLKQVKHADSAVYEEGKWVLHQLNESEITPDEIKTVNRLNSEWKTSLTPDNL 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + S S + ++F + + E ++ + P+ + M ++A S Sbjct: 237 GIASLRPTSLSISGLSNYIAFLKDTGQESK-KFELTYWRKLFQPISVGVMMMLALSFIFG 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + GIF GF+ Y + I + P+A AL+P ++ + ++ +L + Sbjct: 296 PLRSVTAGARIVTGIFFGFLFYVVNEIFGPLSLVYNVAPLAGALMPSVMFLLITWWLLSR 355 Query: 358 K 358 K Sbjct: 356 K 356 >gi|167032003|ref|YP_001667234.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] gi|166858491|gb|ABY96898.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] Length = 353 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 128/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L L + L + + + + + Y++ P Sbjct: 1 MAK-LDRYIGQSVLMAILAVLGIILGLASLFAFIDEMSDLSDT--YTVMEAGNFVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ +L +SEL I RA G+SI +++ + ++L + +L+ Sbjct: 58 RRLYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + G+ Q S W + I + N + T Sbjct: 118 EYVAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEYVHI-----NAVQPNGLLLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D + KI+ A A +D L V + + ++ + + Sbjct: 173 RYRFDNERKIVTSSFARRAQYQDDHWLLADVRTTYFRGDHTEVVNAPQERWDVSLTPELL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + + +N R F+ ++ P++ A+ L+A S Sbjct: 233 NTVILAPESLSITGLWDYIHYLSDQG-LNNARYWLAFWTKVLQPMVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF+ ++ + P+ A +IP + + +L + Sbjct: 292 PLRSVTLGQRVFTGVLVGFVFRIGQDLLGPSSQVFGFPPLLAVVIPAGICALAGVWLLRR 351 >gi|332535154|ref|ZP_08410963.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] gi|332035424|gb|EGI71923.1| hypothetical protein PH505_cf00160 [Pseudoalteromonas haloplanktis ANT/505] Length = 354 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 126/360 (35%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y + L+TT + LL + + +I + +G +Y + + +P Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVG-RGSYDLMTAMLYTLYTIPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L+ + L SELV+ +A G+S Q++ + +I + + + + Sbjct: 60 DLVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMAVCMMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + ++ Q GD + W + + +I + + EN Sbjct: 120 WGAPEAQLHAKEMRNQAIHGGDVFNTQKGVWAKDGSNFINI-----EDVDENGRLNGVHM 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 DK ++ A A+ + L+ V + + + Sbjct: 175 YHFDKSLELTQITKAKDALSRKEGWLLRDVNKVIITSEKTTTEQLPEEFYPSQLTAEKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S SF + +++ N E + ++ P+ + M L+A S Sbjct: 235 VVSVKPESLSFTGLWSYLTYLE-QNEQDTSTYELALWRKLMQPVSVAVMLLVALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + G+ +G + + I + + A++P I+ I + ++ ++ Sbjct: 294 LRTVTMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSIIFIGFATYLMNKR 353 >gi|212710412|ref|ZP_03318540.1| hypothetical protein PROVALCAL_01473 [Providencia alcalifaciens DSM 30120] gi|212686832|gb|EEB46360.1| hypothetical protein PROVALCAL_01473 [Providencia alcalifaciens DSM 30120] Length = 358 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 138/359 (38%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L + L L + L +I E ++G+ +Y+ V VP Sbjct: 1 MFGVLDRYIGRTILNSILMTLFLLVSLSGIIKFVEQLRKVGD-GDYTAMSAGVFTLLTVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L SELV+ +A G + Q+ + +I L I T+++ Sbjct: 60 KDIDIFFPMAALLGALLGLGALASRSELVVMQASGFTRLQIAMSVMKTAIPLVIVTMIMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA +GE+ + + +D W + ++ I ++ F Sbjct: 120 EWIAPAGEQWARNYRAEKIVGSSLVVTDSGMWAKDAHDFIYIQRIKDASTIQDVSIYRFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKK-VVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + R D ++++ ++ Q + + + + Sbjct: 180 DHRKLESVMFAARGTYDADKKLWVLSQVQESILGSQQKITGSQRLTYDWKTNLTPEKLGI 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S S S + + +++ +S + + + I+ PL M L+A S Sbjct: 240 VSLNADSLSIRGLYQYITYLKESGQVASV-YQLSMWQKILAPLSAAVMMLMAVSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + V GI GF+ Y + ++ + PV AA +P +L + +SI +L+++ Sbjct: 299 RTVPMGVRVVSGIVGGFLFYILNQGFGNWSLVYSIPPVVAAALPSVLFLGVSIFLLVKR 357 >gi|77361337|ref|YP_340912.1| hypothetical protein PSHAa2421 [Pseudoalteromonas haloplanktis TAC125] gi|76876248|emb|CAI87470.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 355 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 124/361 (34%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y + L+TT + LL + + +I + +G +Y + + +P Sbjct: 1 MMKTLDWYLGRSILQTTGFALLVLVGISTLIKFIDQLKSVG-RGSYDLMTAMLYTLYTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P L+ + L SELV+ A G+S Q+++ + ++ + + + + Sbjct: 60 GDLVVFFPMAALIGGLTGLGALASNSELVVMHAAGMSRLQIISSVMKTAVFMALCMMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ Q GD + W + N +I + + +N Sbjct: 120 EWGVPEAQLQAKEMRNQAIHGGDVFNAQKGVWAKDGNNFINI-----EDVDQNGKLNGVH 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGF 237 D+ + A A+ + L+ V + + I + + Sbjct: 175 MYHFDQSLSLTQITKAKDALSRENGWLLRGVNKVKISDELITTEQVPEEFYPSQLTAEKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + S SF + + + N E + ++ P+ + M L+A S Sbjct: 235 GVVSVKPESLSFTGLWSYLDYLK-QNDQDTSTYELALWRKLMQPISIAVMLLVALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ + G+ +G + + I + A++P I+ + ++ + Sbjct: 294 PLRTVTMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAFIGAVVPSIIFTGFAAYLMNK 353 Query: 358 K 358 + Sbjct: 354 R 354 >gi|283786944|ref|YP_003366809.1| permease [Citrobacter rodentium ICC168] gi|282950398|emb|CBG90046.1| putative permease [Citrobacter rodentium ICC168] Length = 360 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNSFVYIERVKGDEELGGISIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDPEQKVWRLSQVDESSLQDPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + PV AL+P +S+ ++++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPVIGALLPSASFFFISLWLMMRK 359 >gi|30065451|ref|NP_839622.1| hypothetical protein S4488 [Shigella flexneri 2a str. 2457T] gi|56480550|ref|NP_709939.2| hypothetical protein SF4227 [Shigella flexneri 2a str. 301] gi|30043715|gb|AAP19434.1| hypothetical protein S4488 [Shigella flexneri 2a str. 2457T] gi|56384101|gb|AAN45646.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|313646463|gb|EFS10925.1| hypothetical protein SF2457T_5378 [Shigella flexneri 2a str. 2457T] gi|332748940|gb|EGJ79363.1| hypothetical protein SFK671_4979 [Shigella flexneri K-671] gi|332749802|gb|EGJ80215.1| hypothetical protein SF274771_5046 [Shigella flexneri 2747-71] gi|332763113|gb|EGJ93356.1| hypothetical protein SF293071_4855 [Shigella flexneri 2930-71] gi|333010221|gb|EGK29654.1| hypothetical protein SFVA6_0009 [Shigella flexneri VA-6] gi|333011252|gb|EGK30666.1| hypothetical protein SFK272_0205 [Shigella flexneri K-272] gi|333011952|gb|EGK31337.1| hypothetical protein SFK304_5275 [Shigella flexneri K-304] gi|333012149|gb|EGK31531.1| hypothetical protein SFK227_5242 [Shigella flexneri K-227] Length = 360 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I + F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|170723396|ref|YP_001751084.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] gi|169761399|gb|ACA74715.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] Length = 353 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 127/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L L + L + + + + + Y++ P Sbjct: 1 MVK-LDRYIGQSVLMAILAVLGIILGLASLFAFIDEMSDLSDT--YTVMDAGWFTLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P L+ ++ +L +SEL I RA G+SI +++ + ++L + +L+ Sbjct: 58 RRLYDMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + G+ Q S W + + I + N + T Sbjct: 118 EYVAPISENKAQADRSLAQGGGEAQSSKRGMWHRQGDEFVHI-----NSVQPNGLLLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGF 237 D + KI+ A A ND L V + + + ++ + Sbjct: 173 RYRFDDERKIVTSSFARRARYENDHWVLSDVSTTYFRGDHTEVVKSSEERWDVSVTPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + + +N R F+ ++ P + A+ L+A S Sbjct: 233 NTVVLAPESLSITGLWDYIHYLSDQG-LNNARYWLAFWTKVLQPAVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF+ ++ + P+ A +IP + + +L + Sbjct: 292 PLRSVTLGQRVFTGVLVGFVFRIAGDLLGPSSQVFGFPPLLAVVIPAGVCALAGLWLLRR 351 >gi|209921759|ref|YP_002295843.1| hypothetical protein ECSE_4568 [Escherichia coli SE11] gi|209915018|dbj|BAG80092.1| conserved hypothetical protein [Escherichia coli SE11] Length = 360 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEEFGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|332749215|gb|EGJ79636.1| hypothetical protein SF434370_4578 [Shigella flexneri 4343-70] gi|333009229|gb|EGK28685.1| hypothetical protein SFK218_0005 [Shigella flexneri K-218] Length = 360 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+++ Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMVIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I + F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|82779328|ref|YP_405677.1| hypothetical protein SDY_4286 [Shigella dysenteriae Sd197] gi|81243476|gb|ABB64186.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 361 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 123/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 5 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 64 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A GE++ + Q G + W + N I F Sbjct: 124 WAAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 184 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 244 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 303 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 >gi|110807998|ref|YP_691518.1| hypothetical protein SFV_4231 [Shigella flexneri 5 str. 8401] gi|110617546|gb|ABF06213.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 360 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I + F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVITGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|322418226|ref|YP_004197449.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] gi|320124613|gb|ADW12173.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] Length = 360 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 134/358 (37%), Gaps = 9/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K YL+ L + + V+D E ++ S + T++P Sbjct: 1 MRILTRYVAKAYLRMLGLCLGSFITIYLVVDFMEKVSRFT-RAGASWKYLVLFFITKIPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ + + +SEL R+ G+S+ ++ P + S+L+ + +++ Sbjct: 60 MVVDSAPLAVLMATLLTLGSFSLSSELTAMRSCGVSLARISAPILAISVLMSLVVLMLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + I + + I + ++ + A P + + T Sbjct: 120 FVIPKSYAQRIYIQEVLIQKKSPSTY--FRQHNIWHREEGNVLRASLFEPSQNQLKGVTL 177 Query: 182 ITIDKKNKII-HRKDADLAIIYNDKVKLKKVVEYQYG----RIPIDKNSTTLNIPIKMDG 236 + K + R DA L + N K VV ++ + +K Sbjct: 178 WEVQPKTGLPLRRTDAALGQLGNQGWVFKDVVVREFEGADISRTRKYPQLAAPLKLKPAD 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + E+ + ++ + R TQF+ I +P M + +L Sbjct: 238 LKVLGKYSDSMTLRELNRY-CKKIQAGGYDATRYITQFHSRISLPFGCAVMAFLGIPFAL 296 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS+ + I GF+ I +++ S G+ G+L P+AAA + ++ + Sbjct: 297 RGGRSSGIAFGIGLSIGVGFLYVIINSVIISVGQVGLLPPIAAAWATNFIFLAAGGWL 354 >gi|15804854|ref|NP_290895.1| hypothetical protein Z5874 [Escherichia coli O157:H7 EDL933] gi|26251171|ref|NP_757211.1| hypothetical protein c5363 [Escherichia coli CFT073] gi|254037286|ref|ZP_04871363.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|291285674|ref|YP_003502492.1| Inner membrane protein yjgQ [Escherichia coli O55:H7 str. CB9615] gi|332281055|ref|ZP_08393468.1| conserved hypothetical protein [Shigella sp. D9] gi|12519274|gb|AAG59461.1|AE005658_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26111603|gb|AAN83785.1|AE016771_296 Hypothetical protein yjgQ [Escherichia coli CFT073] gi|537104|gb|AAA97159.1| ORF_o361 [Escherichia coli str. K-12 substr. MG1655] gi|13364717|dbj|BAB38662.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209749438|gb|ACI73026.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749440|gb|ACI73027.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749442|gb|ACI73028.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749444|gb|ACI73029.1| hypothetical protein ECs5239 [Escherichia coli] gi|209749446|gb|ACI73030.1| hypothetical protein ECs5239 [Escherichia coli] gi|226840392|gb|EEH72394.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|290765547|gb|ADD59508.1| Inner membrane protein yjgQ [Escherichia coli O55:H7 str. CB9615] gi|332103407|gb|EGJ06753.1| conserved hypothetical protein [Shigella sp. D9] Length = 361 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 5 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 64 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 124 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 184 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 244 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 303 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 >gi|91213818|ref|YP_543804.1| hypothetical protein UTI89_C4869 [Escherichia coli UTI89] gi|117626606|ref|YP_859929.1| hypothetical protein APECO1_2132 [Escherichia coli APEC O1] gi|237703938|ref|ZP_04534419.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91075392|gb|ABE10273.1| hypothetical protein UTI89_C4869 [Escherichia coli UTI89] gi|115515730|gb|ABJ03805.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|226901850|gb|EEH88109.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 361 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 5 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 64 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 124 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 184 NRRLQSVRYAAAAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 244 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 303 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 >gi|24372948|ref|NP_716990.1| hypothetical protein SO_1370 [Shewanella oneidensis MR-1] gi|24347091|gb|AAN54435.1|AE015581_2 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 352 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 124/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G Y++ + VP Sbjct: 1 MKILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQLRLVG-RGTYTMMDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ +A G+S Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQASGMSRLQITLSAMKTAVPLMLMVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + + T Sbjct: 120 WGAPIAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VADIDKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 + + K+ + A+ A+ D L V + + D Sbjct: 175 YKFNSELKLTNVVHAESALFSKDSWLLTDVKRTDLSYDEVKLEHLDEDVWRSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + N SN R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSIRGLMGYLEYLN-SNSQDPSRYELALWRKVMQPVTVGVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAMAPSLLFTGVAFYFIRR 352 >gi|323496139|ref|ZP_08101199.1| lipopolysaccharide ABC transporter permease [Vibrio sinaloensis DSM 21326] gi|323318883|gb|EGA71834.1| lipopolysaccharide ABC transporter permease [Vibrio sinaloensis DSM 21326] Length = 356 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 120/358 (33%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L + L +I E +G +Y + VP Sbjct: 1 MFKILDLYIGRTIIATTTMVLATLIGLSGIIRFVEQLRSVG-RGSYDLLHAFYFVVLGVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ L+ ++ L +SELV+ +A G S + + ++ L + +L+ Sbjct: 60 RDIEMFFAMSALLGALIGLGMLASSSELVVMQASGYSKLDIGISVLKTAVPLMLIIMLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ +L G W + ++ I L +W Sbjct: 120 EWGAPQAQKMARELRSFSISGGQIVSVRAGVWARDADDFIFIGKVEDDNLYGLKVWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + ++ + + + + + D Sbjct: 180 DKKLYQVLFAPEADYQGNNQWLLKDTQITDMADRVELAKSTVRE-YNWHTTLVPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + +++ +S + R E + + P + M L+A S R Sbjct: 239 KVEPEELAMSGLYDYVTYLKES-EQDSSRYELALWRKVTQPFSIAVMMLMALSFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ +GF Y + PV A++P I+ ++++IL+L +K Sbjct: 298 SVSMGARILSGVVAGFTFYISSEFFGPLTLVYGIPPVFGAIMPSIVFLTIAILLLRRK 355 >gi|311281180|ref|YP_003943411.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] gi|308750375|gb|ADO50127.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] Length = 360 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K L T L L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTILTTILMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAISVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ +L Q + W + + I F Sbjct: 123 WMAPQGEQMARNLRAQAMYGSSLLSTQQGMWAKDGHNYIYIERIKGADELGGISIYSFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S+T + D Sbjct: 183 KRRLQSVRYAASAKFDADKKVWRLSQVDESNLTNPLQITGSQTVSSTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + + PL + M L+A S R Sbjct: 243 ALDPDALSISGLYNYVKYLKSSGQ-DPGRYQLNMWSKVFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +++++ Sbjct: 302 SVPMGVRVITGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSATFFLISLWLMIRR 359 >gi|114562104|ref|YP_749617.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333397|gb|ABI70779.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 352 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 127/359 (35%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + T+ LL L +I + +G Y++ + VP Sbjct: 1 MRILDLYIARMIVSTSSLCLLILTGLSGIIKWVDQLRLVG-RGAYTMLDAGIYVLFLVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ + G+S Q+ + +I L I + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQVSGMSRLQITQSAMKTAIPLMIMVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A EK +L G KS W + + +I + + + + + Sbjct: 120 WGAPIAEKSAKELQATKISGGSLIKSHRGIWAKDGDLFVNIGE-----VQDVNTLSNISL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKL---KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + ++ A+ A+ +D +L + I ++ + D Sbjct: 175 YEFNDQQELTRVTHANTAVFVDDVWQLSVVENTTVKDDRVIRDHLDTDVWQSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S +I + + N R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSISGLIDYLDYLKV-NQQDPSRYELALWRKVMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L V A+ P +L L++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAVVGAIAPSMLFTGLALYYIRK 352 >gi|104783410|ref|YP_609908.1| hypothetical protein PSEEN4441 [Pseudomonas entomophila L48] gi|95112397|emb|CAK17124.1| conserved hypothetical protein, putative membrane protein [Pseudomonas entomophila L48] Length = 353 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 126/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L L + L + + + + + Y++ P Sbjct: 1 MVK-LDRYIGQSVLLAILAVLGIILGLASLFAFIDEMSDLSDT--YTVMDAGSFVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P L+ ++ +L +SEL I RA G+SI +++ + ++L + +L+ Sbjct: 58 RRLYDMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + G+ Q S W + I + N + T Sbjct: 118 EYVAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEFVHI-----NSVQPNGLLLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D++ KI A A + K L V + + ++ + + Sbjct: 173 RYRFDEQRKIQTSSFARKAQYHEGKWVLNDVATTYFRGDHTEVVKAPEEVWDVSVTPELL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + + +N R F+ ++ P + A+ L+A S Sbjct: 233 NTVVLAPESLSITGLWDYIHYLSDQG-LNNSRYWLAFWTKVLQPAVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF+ ++ + P+ A +IP + + ++ + Sbjct: 292 PLRSVTLGQRVFTGVLVGFVFRIAGDLLGPSSQVFGFPPLLAVVIPAGICALAGLWLMRR 351 >gi|319944263|ref|ZP_08018539.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] gi|319742558|gb|EFV94969.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] Length = 382 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 63/380 (16%), Positives = 125/380 (32%), Gaps = 26/380 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + LLG + L DL + +G+ Y + + + +P Sbjct: 1 MKLMARYLTREIAGGIMAVLLGFLGLFAFFDLINELDDIGQ-GGYRLPQAVLYVLLGLPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +++P L+ I + SE RA G+S L +V +LL + T + Sbjct: 60 HIYELMPVAALIGCIYALAQFAQNSEFTAMRAAGMSRQLALRGVLVLGVLLAVLTAVAGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQK-SDIIPWMQISNPQQDIFIGAKKILPENHI----- 175 IA E+ L G W++ S D + + + Sbjct: 120 WIAPMAEQRAQQLRMDVLGKGSGVGAFRSGLWLKDSVRGPDGQRLQTRFVNIGTLEADGG 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDK------VKLKKVVEYQYGRIPID------- 222 D ++ A+ +L+ V ++ Sbjct: 180 LSKVAIHEFDTDFRLTAVIHAEHGRYQPAHNGQASSWRLEGVETTRFNVSRTQTGYDALH 239 Query: 223 -----KNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + T + + S + + S + N + R E + Sbjct: 240 AAVERRPETVWVSDLNPALLSVLAIAPDRMSALALWRYTSHLKE-NAQNANRYELALWKK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 +V PL ++ M ++A R+ + + +GI G Y + + + G P Sbjct: 299 VVYPLAIIVMLMLALPFGYLQVRAGGIGLKLFFGISLGVGFYIMNGLFSNLGLINTWPPW 358 Query: 338 AAALIPVILTISLSILILLQ 357 A IP IL ++L++++L + Sbjct: 359 LAVSIPSILFLALALVMLNR 378 >gi|183600431|ref|ZP_02961924.1| hypothetical protein PROSTU_04002 [Providencia stuartii ATCC 25827] gi|188020227|gb|EDU58267.1| hypothetical protein PROSTU_04002 [Providencia stuartii ATCC 25827] Length = 358 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 129/359 (35%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L + L L + L +I E ++G+ Y+ V +P Sbjct: 1 MFGVLDRYIGRTILNSILMTLFMLVSLSGIIKFVEQLRKVGD-GEYTTLGAGVFTLLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L SELV+ +A G + Q+ + +I L I +L+ Sbjct: 60 KDIDIFFPMAALLGALLGLGALASRSELVVMQASGFTRLQIALSVMKTAIPLVIVAMLIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A S ++ + + +D W + I + + F Sbjct: 120 EWVAPSADQWARNYRAEKIVGNSLVVTDEGMWAKDGPDFIHIQRVSDTTSIQEVSIYRFN 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKK-VVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 D ++ + ++ + + + + + Sbjct: 180 EQHKLTSVMFASSGAYDKDNQLWVLSQVDESILSSEKKITGSQRLTYEWKTNLTPEKLGI 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S S S + + +++ +S E + I+ PL M +A S Sbjct: 240 VSLSADSLSIRGLYQYIAYLKESGQVAAV-YELSMWKKILAPLSAAVMMFMAVSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + V GI GF+ Y + + + P+ AAL+P +L + +SI++L+++ Sbjct: 299 RTVPMGVRVVSGIVGGFLFYVLNEGFGKWSLVYSIPPIIAALLPSVLFLGVSIVLLVKR 357 >gi|117925963|ref|YP_866580.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] gi|117609719|gb|ABK45174.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] Length = 371 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 72/369 (19%), Positives = 145/369 (39%), Gaps = 11/369 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP IL+RY + +L+ + + L F++D E + G + L R+P Sbjct: 1 MP-ILFRYLLQLFLQGFVKVFSIFIALFFLMDGAEQIRRFGGRDHVIWQDMVELIFLRMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 Q +P I L+ + V L R +EL + R+ G+S+ ++L PF++G +++ +L++ Sbjct: 60 HFFTQFLPPIALLTTLFVVTRLTRLNELTVIRSGGVSLVRILIPFLLGGVMVAGVQMLLL 119 Query: 121 NPIATSGEKIG------IDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + I ++L +Q + + + + AK+ + Sbjct: 120 DQIVPRTNAAAERSIFRMNLPEQAALYESMVSLEGVRKDNLWIRDGGQILHAKRAYGDKR 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIP 231 + + T ++ ++ R DA A N+ L Y++ T I Sbjct: 180 LLLEVTIFRFTPEHDLLMRADAHKATWENEGWVLHNGQIYRFNGHTTQSEPFTRMPWAIN 239 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 ++ + ++ + Q S + K + + Y + PL +A L+A Sbjct: 240 LEKEQIKRATPQPEELSLQALWKHADRLAREG-YDATPYWVTLYRKLADPLTTLAAILLA 298 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 +L R + G +GF ++ ++ + + G L P AA PV+ I + Sbjct: 299 FPFALRLHRMGGTFRSMLMGFITGFFMFVVVDLFTALGFGERLPPFLAAFAPVMFFICIG 358 Query: 352 ILILLQKED 360 +LL E+ Sbjct: 359 GFLLLHLEE 367 >gi|281603538|gb|ADA76522.1| Inner membrane protein yjgQ [Shigella flexneri 2002017] Length = 361 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 5 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 64 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I + F Sbjct: 124 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEVLGGISIYAFNE 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 184 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTDLTPDKLGVV 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 244 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 303 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 >gi|39997021|ref|NP_952972.1| hypothetical protein GSU1923 [Geobacter sulfurreducens PCA] gi|39983909|gb|AAR35299.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298506038|gb|ADI84761.1| membrane protein, YjgQ-related [Geobacter sulfurreducens KN400] Length = 358 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 129/354 (36%), Gaps = 7/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY YLK L + + VID E ++ ++P II Sbjct: 3 ILTRYIAGAYLKILGLCLASFVAIYLVIDFLEKIGRLLRFQ-PRWIDIIQYFICKLPEII 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+IP L+ ++ L+R SE+V R G+ + ++ P +V + + + T+ + Sbjct: 62 TQVIPLAVLMSTLLTLGMLSRNSEIVAMRGCGVGLGRISAPLIVIAAAVSLLTIFSNEFV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 S + + Q I + + + A+ P T Sbjct: 122 LPSSYRQMRYVDQVLIRKQGTNTF--FRQNNIWHKDESAIMMARVFDPGRQALRGITLWR 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKF 240 + + R DA + K V ++ S + +K++ + Sbjct: 180 FSDGMRPVSRIDAAEGTWDGARWTFKTVTVRGLAGPSVETRTLASLPAELNLKIEDLKVV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + F+++ + + + R E Q + I +P + M + +L R Sbjct: 240 DKYADNMGFFKLRDYVRKLK-AGGYDTTRYEAQMHSKISLPFASLIMAFLGIPFALRGGR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S+ + + I GF + +I+ SFG++GIL P+ +A +L I + Sbjct: 299 SSGVALGITASIGIGFAYFITNSILISFGQTGILPPLISAWAANVLFALSGIWL 352 >gi|332086995|gb|EGI92129.1| hypothetical protein SB359474_4824 [Shigella boydii 3594-74] Length = 360 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPLGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|229845238|ref|ZP_04465371.1| predicted permease [Haemophilus influenzae 6P18H1] gi|229811833|gb|EEP47529.1| predicted permease [Haemophilus influenzae 6P18H1] Length = 358 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 127/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L VI E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAVIKFVEQFRSVGK-GTYDIWQAVIFTGLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELV+ ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGMAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + N + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGNNFVFVRRVTDDAKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + K ++ ++ + I + T + D Sbjct: 180 QQHNLTELKHSNQASYSEDEAKWTLRQVNHSTITKDEIITTNHLLETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPISVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQMSVVYGIPAIFGALIPSLLFIVMIWWLLSHKRD 358 >gi|315617676|gb|EFU98282.1| conserved hypothetical protein [Escherichia coli 3431] Length = 360 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAMGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA GE++ + Q G + W + N I F Sbjct: 123 WIAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAASAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFVISLWLLMRK 359 >gi|145629200|ref|ZP_01784999.1| hypothetical protein CGSHi22121_10370 [Haemophilus influenzae 22.1-21] gi|145639140|ref|ZP_01794747.1| hypothetical protein CGSHiII_03859 [Haemophilus influenzae PittII] gi|144978703|gb|EDJ88426.1| hypothetical protein CGSHi22121_10370 [Haemophilus influenzae 22.1-21] gi|145271702|gb|EDK11612.1| hypothetical protein CGSHiII_03859 [Haemophilus influenzae PittII] gi|309750721|gb|ADO80705.1| Lipopolysaccharide export permease, LptG [Haemophilus influenzae R2866] Length = 358 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 128/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDTRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|300935934|ref|ZP_07150887.1| putative inner membrane protein [Escherichia coli MS 21-1] gi|300458870|gb|EFK22363.1| putative inner membrane protein [Escherichia coli MS 21-1] Length = 360 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGISPIIGALLPSASFFLISLWLLMRK 359 >gi|301028101|ref|ZP_07191379.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|299878818|gb|EFI87029.1| putative inner membrane protein [Escherichia coli MS 196-1] Length = 360 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + + L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVVMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|323166626|gb|EFZ52385.1| hypothetical protein SS53G_3092 [Shigella sonnei 53G] Length = 360 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ GE++ + Q G + W + N I F Sbjct: 123 WVASQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|218672883|ref|ZP_03522552.1| putative permease protein [Rhizobium etli GR56] Length = 340 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 199/340 (58%), Gaps = 2/340 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L RYFF+ YL TT +FL+G + F++D +E +M LP Y+I G V+ A R+P Sbjct: 2 MFGTLSRYFFRRYLATTGWFLIGVSAISFLLDFSETAGRMSGLPGYTIGGGIVMTAVRLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+QQ IPFI L V + V LNR ELV++RA GIS+WQ + PF+ GS+ LG+ T+ + Sbjct: 62 LILQQTIPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFIAGSLALGLLTMTAL 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDF 179 NP+A G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 122 NPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLVDA 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 182 VLIHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + F+++ +++ + I ETQF L+ PL+LVAMTLIAA+VSL+FS Sbjct: 242 RLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTLIAATVSLKFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 R NQ R ++ GI SGFMLY I ++K+FG SG++ P A Sbjct: 301 RFNQSRPVILGGILSGFMLYVITVLVKAFGSSGVVPPFVA 340 >gi|37522902|ref|NP_926279.1| hypothetical protein gvip459 [Gloeobacter violaceus PCC 7421] gi|35213904|dbj|BAC91274.1| ycf84 [Gloeobacter violaceus PCC 7421] Length = 384 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 49/370 (13%), Positives = 113/370 (30%), Gaps = 16/370 (4%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I+ Y L L+ + L ++ + S++ A + A R+P + Sbjct: 15 KIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSVTVAAQVFALRLPSV 74 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I P L+ ++ + L+ +E V RA G+S+++L+ P + +L+ T + Sbjct: 75 IVITFPTAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAVGLLVTGATFMCNEL 134 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS-----NPQQDIFIGAKKILPENHIWE 177 + + L+ Q D + + ++ Sbjct: 135 VVPASNAEASRLLFQAIDRDKPDFQKDNIIYPEYGFVTPRDGRPTYHTLVRLFYARQFAG 194 Query: 178 DFTSITIDKKNKIIHRKDADL-----AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPI 232 + L+ Y +N Sbjct: 195 GIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAPDGSYRNVLRFKRQQ 254 Query: 233 KMDGFQKFS----EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMT 288 + + ++ + S + IP+ Sbjct: 255 VKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQVRT-LQVSLQQKYAIPVTCFVFA 313 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 L+ A++ L R++ + + I F Y ++ + ++ G++G++ P A P + T Sbjct: 314 LVGATLGLRRVRTSN-ALGLGLSILIIFGYYLLMFVAQALGQTGVIAPWLGAWAPNLATG 372 Query: 349 SLSILILLQK 358 +L +L+L + Sbjct: 373 ALGVLLLWRT 382 >gi|157147732|ref|YP_001455051.1| hypothetical protein CKO_03536 [Citrobacter koseri ATCC BAA-895] gi|157084937|gb|ABV14615.1| hypothetical protein CKO_03536 [Citrobacter koseri ATCC BAA-895] Length = 360 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 QRRLQSVRYAASAKFDADNKVWRLSQVDESDLKDPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRK 359 >gi|145631589|ref|ZP_01787355.1| predicted permease [Haemophilus influenzae R3021] gi|144982789|gb|EDJ90315.1| predicted permease [Haemophilus influenzae R3021] Length = 358 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 129/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELV+ ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVVMQSAGFSRFKIGMAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|145635440|ref|ZP_01791141.1| predicted permease [Haemophilus influenzae PittAA] gi|145641037|ref|ZP_01796618.1| predicted permease [Haemophilus influenzae R3021] gi|145267314|gb|EDK07317.1| predicted permease [Haemophilus influenzae PittAA] gi|145274198|gb|EDK14063.1| predicted permease [Haemophilus influenzae 22.4-21] Length = 358 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 130/360 (36%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L T L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|127511874|ref|YP_001093071.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] gi|126637169|gb|ABO22812.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] Length = 352 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 130/359 (36%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G Y++ + +P Sbjct: 1 MRILDLYIARVLLSTSALCLLVLTGLSGIIKWVDQIRLVG-RGTYTMVDAGIYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ ++ G+S +Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRFQITLSAMKTAVPLMLLVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ G +L G KS W + + +I + + + + Sbjct: 120 WGAPVAERHGKELQAVKLSGGSLFKSSRGIWAKDGDLFVNIGE-----IEDINSLHNIVL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 D K ++ +A + D +L V + + + + D Sbjct: 175 YEFDDKLNLVGTIEARRGVYSKDHWRLLDVRQTKITPEQVSLTDLTLYRWESTLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + +N + R E + I+ P+ + M L+A S Sbjct: 235 VVSVKPEALSIQGLVDYLEYLRVNNQ-DSGRYELALWRKIMQPITVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L V A++P ++ S +I + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYICNEIFGPMTLVYGLPAVLGAVMPPLIFSSAAIYYIRR 352 >gi|261401001|ref|ZP_05987126.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|269209118|gb|EEZ75573.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|309378517|emb|CBX22870.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 356 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 62/361 (17%), Positives = 143/361 (39%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + T+Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMTAMTVYTLLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P TL+ ++ L SEL + +A G+S +LL+ ++ + T + Sbjct: 60 RAYELMPLATLIGGLLSLGRLAADSELTVIKAGGVSTRKLLSVLSQFGLIFALATAALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + + ++ NG + W++ +Q+ I +++LP++ + Sbjct: 120 WIAPALNQKAENIKAAAI-NGKISTGNTGLWLK----EQNSIINIREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 DK + + + + +LK + G ++ +S L I +K + + Sbjct: 175 ERNDKNELVQATEAESAVLNDDGSWQLKNIRRSTLGEDKVETSSAAEENLPISVKRNLME 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ +S +N + + +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTAYISHLE-NNRQNTQIYAIALWHKLVYPVAAWVMALVALAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A ++P L + I ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTARLYGVPPFLAGILPTALFALIGIWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|90408709|ref|ZP_01216858.1| hypothetical protein PCNPT3_03815 [Psychromonas sp. CNPT3] gi|90310191|gb|EAS38327.1| hypothetical protein PCNPT3_03815 [Psychromonas sp. CNPT3] Length = 354 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 129/360 (35%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 GIL RY K T L + L +I E +G+ +Y + ++P+ Sbjct: 1 MGILDRYIGKTVFAATFLTLFVLLGLSSIIKFVEQMRSVGQ-GSYDVLAAGYFVLLKMPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L+ ++ +L +SELV+ +A G+S +++ + ++ + +L+ Sbjct: 60 EMTVFFPMAALIGALIGLGSLASSSELVVMQAAGMSKFRIAGAVLKTAVPMVFAVMLLAE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +K + + + W++ ++ I + + Sbjct: 120 FVAPVTDKEAYSMRDLARSGQSSVSNKYGVWVKDADAFISIGR-----MNSQSELFNVRF 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 ++ ++ H A L+ ++ K+S + Sbjct: 175 YFFNESMQLDHAVLAKKVSYRGGYWLLEDSTWTKFESDRTNVEHKDSDVWQTDLTPKKLD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S +I +++ +N R + V+P +V M L++ S Sbjct: 235 VILSDPSKMSMRDIYGYITYLE-NNQQDANRYLLILWRKAVLPFTVVVMMLLSVSFIFGG 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + GI SGF + + L P+ AL+P +L + +++ +L ++ Sbjct: 294 LRTVTMGTRLILGIASGFAFHVSGELFGPASLVFGLSPLLGALLPSMLVLCIAMYLLRRQ 353 >gi|206575795|ref|YP_002240776.1| putative permease [Klebsiella pneumoniae 342] gi|288937432|ref|YP_003441491.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|290512173|ref|ZP_06551540.1| permease [Klebsiella sp. 1_1_55] gi|206564853|gb|ACI06629.1| putative permease [Klebsiella pneumoniae 342] gi|288892141|gb|ADC60459.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|289775168|gb|EFD83169.1| permease [Klebsiella sp. 1_1_55] Length = 360 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 122/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + +Y + VP Sbjct: 4 FGVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKK-SGQGSYDALGAGLYTILSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + + I F Sbjct: 123 WVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAFNP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + ++ + S T + D Sbjct: 183 ERRLESVRYAASAKFDSENKVWRLSQVDESNLTDPKQVTGSQMVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++++K Sbjct: 302 SVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRK 359 >gi|220906932|ref|YP_002482243.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] gi|219863543|gb|ACL43882.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] Length = 374 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 115/363 (31%), Gaps = 9/363 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY L+ + +L I + + +++ + R+P I Sbjct: 9 IIDRYILAEMAMPFLFGVAVFTLLAATIGVVFDLLRWLADNRLTLAVALQILGLRLPEFI 68 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P L+ ++VF L R SELV + G+S+++L P ++ LL T + I Sbjct: 69 ILALPMSMLLTPLLVFNTLGRRSELVALQGCGVSVYRLALPILLVGFLLAGLTFGLNETI 128 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + + ++ + + + I + + Sbjct: 129 APQTNYQALQIQTAALRRPQQKFREKNIFYREFVDNTLSRIFYARQFDGQQMQRITILNF 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID--------KNSTTLNIPIKMD 235 K I +A ++ Y T L +P Sbjct: 189 DQGKLDQIIVANAAEWDQKQKHWDFQQGTVYSLTPNTESSSYTSIQPFQVTQLPLPSTPL 248 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN-YRAETQFYFLIVIPLMLVAMTLIAASV 294 + + + +E + + ++ R + P V LI A++ Sbjct: 249 QLATETRKIEQMNRWEATQFLRAIEQTGDQKWIRRWKVGIQEKNAFPFTCVVFGLIGAAL 308 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L +Q + F Y + + S G+ G+L P+ AA + ++ + + Sbjct: 309 GLSSYNRSQTSRGFGLSLAMIFAYYLLNSTCISLGEGGLLSPLLAAWLSPLVGLLTGGWL 368 Query: 355 LLQ 357 L + Sbjct: 369 LFR 371 >gi|119773934|ref|YP_926674.1| hypothetical protein Sama_0797 [Shewanella amazonensis SB2B] gi|119766434|gb|ABL99004.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 352 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 128/359 (35%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + T+ LL L +I + +G +Y++ V +P Sbjct: 1 MSILDWYIARVLISTSSLCLLVLTGLSGIIKWVDQLRLVG-RGSYTMMDAGVYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ + SELV+ +A G S Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGLGMMAANSELVVMQASGQSRLQITVSAMKTAVPLMLLVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + E+ +L G KS W + + +I + + + + T Sbjct: 120 WVAPAAEQRANELKATMISGGSLIKSHRGIWAKDGDLFVNIGE-----VSDINTLGNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 D++ ++ H +A A +++ V + I + + D Sbjct: 175 YEFDQQERLNHVVNARRATFDGKAWQMQGVSKTHITEEAIVREDIDSELWQSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S ++ + + ++ R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPESLSIQGLMGYLDYLRINSQ-DPSRYELALWRKLMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +GF Y I L A P +L ++ + + Sbjct: 294 LRSVTMGARVLLGVVAGFSFYICNEIFGPMTMVYQLPAFIGAGAPALLFAGAAVFYIRR 352 >gi|152973139|ref|YP_001338285.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892751|ref|YP_002917485.1| putative transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|330016469|ref|ZP_08308442.1| lipopolysaccharide export system permease protein LptG [Klebsiella sp. MS 92-3] gi|150957988|gb|ABR80018.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545067|dbj|BAH61418.1| putative transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328528830|gb|EGF55773.1| lipopolysaccharide export system permease protein LptG [Klebsiella sp. MS 92-3] Length = 360 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 122/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + +Y + VP Sbjct: 4 FGVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKK-SGQGSYDALGAGLYTILSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + + I F Sbjct: 123 WVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAFNP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + ++ + S T + D Sbjct: 183 ERRLQSVRYAASAKFDSENKVWRLSQVDESDLTDPKQVTGSQMVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++++K Sbjct: 302 SVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRK 359 >gi|313668050|ref|YP_004048334.1| hypothetical protein NLA_7120 [Neisseria lactamica ST-640] gi|313005512|emb|CBN86948.1| conserved hypothetical integral membrane protein [Neisseria lactamica 020-06] Length = 356 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 143/361 (39%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + T+Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMTAMTVYTLLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P TL+ ++ L SEL + +A G+S +LL+ ++ + T + Sbjct: 60 RAYELMPLATLIGGLLSLGRLAADSELTVIKAGGVSTRKLLSVLSQFGLIFALATAALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + + ++ NG + W++ +Q+ I +++LP++ + Sbjct: 120 WIAPALNQKAENIKAAAI-NGKISTGNTGLWLK----EQNSIINIREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 DK + + + + +LK + G ++ ++ L I +K + + Sbjct: 175 ERNDKNELVQATEAESAVLNDDGSWQLKNIRRSTLGEDKVETSTAAEENLPISVKRNLME 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ +S +N + + +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTAYISHLE-NNRQNTQIYAIALWHKLVYPVAAWVMALVALAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A ++P L + I ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTARLYGVPPFLAGILPTALFALIGIWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|83814343|ref|YP_445251.1| hypothetical protein SRU_1124 [Salinibacter ruber DSM 13855] gi|83755737|gb|ABC43850.1| membrane protein, putative [Salinibacter ruber DSM 13855] Length = 410 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 121/362 (33%), Gaps = 10/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 R+ K LK + F+ ++ V+ E + + V VP Sbjct: 50 MSTFERHIIKRLLKGFVLFVGALLVFFIVLHWVEYSDDFLDGGATIWEVFTVFYPNYVPE 109 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II+ P + I + L + +LV + G+S++QL+ P++ +L+ +F Sbjct: 110 IIRLTSPLALFLSCIYLTGTLAQELQLVALQTSGVSLYQLMRPYLGVGLLVTVFMFGFNG 169 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + ++ K + H + Sbjct: 170 WVVPKTNEVVVRYENEYLPGNQKSVQTSEIHRRNGPNSILSVGYYDADRERAHT---VSL 226 Query: 182 ITIDKKNKIIHRKDADLAIIYN--DKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMD 235 + ++ R DA+ + + +L V + + + S + + Sbjct: 227 QQLAGDARLARRVDANRMEWDDSLEVWRLDDVTRRTFVKGETQRKRTIASLDTTLQVYPR 286 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + A+ + + ++ +S + R +Y P + + LI ++ Sbjct: 287 DLARSKNDVAAMTIPAAAEYLAALRRSGVGGLTRPLVAYYNKFAYPFANLLLVLIGVPIA 346 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + A G+ F+ ++ + + G +G L P A +P + +++L+L Sbjct: 347 -STRRRGGQAVRFAIGLLIAFVYLSVQKLAEPLGYAGTLSPAWTAWLPHLTFAVVALLVL 405 Query: 356 LQ 357 Sbjct: 406 WW 407 >gi|82546485|ref|YP_410432.1| hypothetical protein SBO_4178 [Shigella boydii Sb227] gi|81247896|gb|ABB68604.1| conserved hypothetical protein [Shigella boydii Sb227] Length = 361 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 5 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 64 DVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 124 WVAPLGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 184 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 244 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 303 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 >gi|260886292|ref|ZP_05897555.1| membrane protein, YjgP/YjgQ family [Selenomonas sputigena ATCC 35185] gi|330839725|ref|YP_004414305.1| permease YjgP/YjgQ family protein [Selenomonas sputigena ATCC 35185] gi|260864011|gb|EEX78511.1| membrane protein, YjgP/YjgQ family [Selenomonas sputigena ATCC 35185] gi|329747489|gb|AEC00846.1| permease YjgP/YjgQ family protein [Selenomonas sputigena ATCC 35185] Length = 363 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 131/356 (36%), Gaps = 6/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L +Y F+ + + G + Q S + +P I Sbjct: 5 LLDKYIFREVCLAFFFGICGTSAVFVGSGTLFRIAQYITEYGASFGSVVKMFIFSLPAIA 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ F L+ +SE+ ++ G+S +++ P +V +++ IF++L I Sbjct: 65 IYTFPMSMLLAALLTFGRLSSSSEITAMKSCGVSFYRIAAPVIVLGVVVSIFSILFTEHI 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++I KS ++ + + + + ++ Sbjct: 125 VPRANNAYENVIAYEIQGNAAPKSQDHIVIKEIKDGEMQRLMYARRYDAATETLEGVTLQ 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDGFQK 239 ++ + + +DA A + + + Y+ + + L I + Sbjct: 185 SFEQGETKYVQDAAYAKWEGTQWTMYRGAIYEVSGGKSEHTMRFDKQVLPINAGPGRIVR 244 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ + E+ +++ ++ + ET+ Y I IP+ + +I + ++ + Sbjct: 245 EQKKPEELTMKELRQQIE-LMRTQFVDTKKLETELYQRITIPMASLVFAIIGVPLGIQPT 303 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS+ + + F Y ++T+ + G+SG L P A +P + + + ++ Sbjct: 304 RSSS-SRGIGLSLLIFFCYYVLMTLAGALGQSGALNPAYAVWLPNVAGLLIGAYLM 358 >gi|113474402|ref|YP_720463.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] gi|110165450|gb|ABG49990.1| permease YjgP/YjgQ [Trichodesmium erythraeum IMS101] Length = 392 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 47/373 (12%), Positives = 120/373 (32%), Gaps = 17/373 (4%) Query: 2 PGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 P I + RY + L+ + L + + IS + ++ Sbjct: 17 PKISVMDRYIIAELIGPFLFGVGLFSSLGITVGAMFELVRKVTESGLPISIAIQVFLLKM 76 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P I P ++ ++V+ ++ SE+V R+ GISI++++ P ++ S+ + + + Sbjct: 77 PEFIGLAFPMAMILTTLMVYSQMSGHSEIVALRSCGISIYRMIIPTIILSLTVTTLSFAL 136 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS--------------NPQQDIFIG 165 I S ++++ + + + + Sbjct: 137 NEIIVPSANYQASLILEKTLEQENPPFKEENIFYPEFGKVKQPDGSQDDTLTRLFYAEKF 196 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 K + I + + ++ I + V R + + Sbjct: 197 DGKYMQGVTILDRSQYGVDQIVSSESATWNSAENIWDLFNGTIYLVSPDGSYRNIVKFDH 256 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNY-RAETQFYFLIVIPLML 284 L + + + + + + S + + + + + +P + Sbjct: 257 KKLKLSTAPLDLAGKRRTYKQMNISQSYEYLELMRLSGNYRKVVKTQVRIQQKLALPFVC 316 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + M L+ A++ + R + F Y + I + G+ IL P A +P Sbjct: 317 LVMGLVGAALGIRPQRKANRGTSFGISVIIIFAYYLLSFITGAMGQKEILTPFLAGWLPN 376 Query: 345 ILTISLSILILLQ 357 L + +++ +L + Sbjct: 377 FLGLGVAVFLLAR 389 >gi|293390145|ref|ZP_06634479.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950679|gb|EFE00798.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1] Length = 355 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 132/360 (36%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY K L T LL + L +I E +G+ Y I + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGK-GTYDILQAIAYTVLTMPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ NL SELV+ ++ G S ++ + ++ L + T+++ Sbjct: 60 DVETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGFAVMKTTLPLVLLTMVIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ D+ + G W + N + + D Sbjct: 120 WGIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYVRRITDDVE-----LNDIYI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 T +++ ++ K A+ A + K L++ E + I + + D Sbjct: 175 YTFNEQRQLEKLKHANRATFNSGKWTLQQAKESRIQPENIQTTNRLNEEWQTNLTPDKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + ++F ++ E ++ + P+ + M ++A S Sbjct: 235 VASLRPTSLSISGLSNYITFLRETGQDSKN-FELTYWRKLFQPISVGVMMMLALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF+ Y + + F P+ AL+P +L + ++ +L ++ Sbjct: 294 LRSVTAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLIITWWLLARR 353 >gi|304392006|ref|ZP_07373948.1| permease [Ahrensia sp. R2A130] gi|303296235|gb|EFL90593.1| permease [Ahrensia sp. R2A130] Length = 372 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 165/373 (44%), Gaps = 13/373 (3%) Query: 1 MPG-ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 M G L Y K +L+ T++ L L+ ++D+ E+ + + + + R Sbjct: 1 MIGQTLSVYLAKNFLRNTMFVFLVFFFLIALVDMLELSRRTARIDDVGFFDVVSIVMLRA 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P++ + I+PF L LN+ ELV++RA G+S+WQ L P + ++G+ L+ Sbjct: 61 PVLSENIVPFAVLFGASASLLLLNKRLELVVARASGVSVWQFLAPICAAAAVVGLVMGLI 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDI--IPWMQISNPQQDIFIGAKKILPENHIWE 177 NP++ + + L SD W +I+ P D+ + A Sbjct: 121 YNPLSLRLQASSLSLEGVVFAKNTGVTSDTTWNFWTRIARPDGDMVLRAAVAAERGKKLS 180 Query: 178 DFTSITIDKKNKIIHRKDADLAIIY---------NDKVKLKKVVEYQYGRIPIDKNSTTL 228 + DK K R DA A ++ L++ G P + Sbjct: 181 GVSLYLFDKDGKPEQRIDAASANFAEAVPGTDSLPNRYVLERANILTVGEKPKVVPVMVV 240 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMT 288 + I + + SF+++ + + ++ +T+++ ++ +PL+ VAM Sbjct: 241 PVSITAELLEIRQTSAERVSFWDLDDQAELAERAGRPPEP-FQTRWHSVLALPLLFVAMV 299 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 L+A +VSL F+R + G+ +GF+LY + ++ +FG +G++ PV AA P + Sbjct: 300 LLAGTVSLTFARFGINGKRILTGVVAGFVLYVLTKLVVTFGSNGLVSPVIAAWSPATVGS 359 Query: 349 SLSILILLQKEDG 361 ++I +LL +EDG Sbjct: 360 LIAITVLLHQEDG 372 >gi|301170458|emb|CBW30065.1| conserved inner membrane protein [Haemophilus influenzae 10810] Length = 358 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 129/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKEEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|330962174|gb|EGH62434.1| hypothetical protein PMA4326_26817 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 353 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 122/360 (33%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDT--YTLPDALSYVMMTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ +L +SEL I RA G+SI +++ + +LL I VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + GD Q + W + I + N + T Sbjct: 118 EYVAPYAENKAQAARSLAQGLGDAQSAKHGLWHRQGEEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGF 237 D + ++ A A D +LK V + + ++ + Sbjct: 173 RYRFDDQRHMLTSSFAKEAHFKTDYWELKDVTTTHFNDGRTEVINTPDERWDVSLSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF I ++ P+ A L+P + +L+L + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAGVCALAGVLLLRR 351 >gi|74314741|ref|YP_313160.1| hypothetical protein SSON_4447 [Shigella sonnei Ss046] gi|73858218|gb|AAZ90925.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 361 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 5 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 64 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ GE++ + Q G + W + N I F Sbjct: 124 WVASQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 184 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 244 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 303 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 360 >gi|261345121|ref|ZP_05972765.1| membrane protein, YjgP/YjgQ family [Providencia rustigianii DSM 4541] gi|282566809|gb|EFB72344.1| membrane protein, YjgP/YjgQ family [Providencia rustigianii DSM 4541] Length = 358 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 137/359 (38%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L + L L + L +I E ++G+ +Y+ V VP Sbjct: 1 MFGVLDRYIGRTILNSILMALFLLVSLSGIIKFVEQLRKVGD-GDYTAMSAGVFTLLTVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ +++ L SELV+ +A G + Q+ + +I L I +L+ Sbjct: 60 KDIDIFFPMAALLGSLLGLGALASRSELVVMQASGFTRLQIAMSVMKTAIPLVIVAMLIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +G++ + + +D W + ++ I ++ F Sbjct: 120 EWVAPAGDQWARNYRAEKIVGNSLVATDSGMWAKDAHDFIYIQSIKDANNIQDVSIYRFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKK-VVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 K R D ++ + ++ Q + + + + Sbjct: 180 DQRKLKSVMFAARGTYDANKKLWVLSQVDESILSSQQKITGSQRLTYEWQTNLTPEKLGI 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S S S + + +++ +S + + + I+ PL M L+A S Sbjct: 240 VSLHADSLSIRGLYQYITYLKESGQLASV-YQLSMWQKILAPLSAAVMMLMAVSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + V GI GF+ Y + ++ + PV AA +P +L + +SI +L+++ Sbjct: 299 RTVPMGVRVVSGIVGGFLFYILNQGFGNWSLVYSIPPVIAAALPSVLFLGVSIFLLVKR 357 >gi|110596903|ref|ZP_01385193.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] gi|110341590|gb|EAT60050.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] Length = 359 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 130/360 (36%), Gaps = 7/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY F+ + K ++ + L +I + E + M N SI + +P Sbjct: 1 MKILDRYIFRQFAKAFIFTSTTFVFLFILITMVEHLDDMMGR-NLSIFQIIGYYLLSIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P +L+ +I+V L+ +SEL R+ G+S+ QLL PF+ G+ + ++ Sbjct: 60 TVLVTAPVSSLLASILVAGRLSASSELSAIRSAGVSMRQLLYPFLAGASFIAAVNLVNSC 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + ++ + + I + + IG+ Sbjct: 120 WIAPAAFSGIARFEREHLSKEPGKLPENRNMHLIEQGNRIVSIGSMGSDESTGKAVSIEE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + I + + L+ + + + + I Sbjct: 180 FSGAHLVSRIDAASMSY-NPKSGEWMLENAAIRSFTGGSEQYSFIGRKPVKLSISPRSLL 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 +F+ Q + + ++ ++ I R+ +FY + +P + + LI +S + Sbjct: 239 EFNLQPDEMNVSRHYRYLTEKRQAGISGLDRSAVKFYTKLSLPFASLIVMLIGVPLSAKK 298 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + +F GF+ + + G G + P AA +P I+ + + ++ + Sbjct: 299 KR-GGLASEITIALFFGFLFIGLQKTVAIAGYQGAMNPALAAWLPNIIFLIVG-YLIYKT 356 >gi|148827126|ref|YP_001291879.1| permease [Haemophilus influenzae PittGG] gi|148718368|gb|ABQ99495.1| predicted permease [Haemophilus influenzae PittGG] Length = 358 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 129/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|68250306|ref|YP_249418.1| permease [Haemophilus influenzae 86-028NP] gi|145633638|ref|ZP_01789365.1| predicted permease [Haemophilus influenzae 3655] gi|148825754|ref|YP_001290507.1| leucyl aminopeptidase [Haemophilus influenzae PittEE] gi|229847324|ref|ZP_04467426.1| leucyl aminopeptidase [Haemophilus influenzae 7P49H1] gi|68058505|gb|AAX88758.1| predicted permease [Haemophilus influenzae 86-028NP] gi|144985515|gb|EDJ92331.1| predicted permease [Haemophilus influenzae 3655] gi|148715914|gb|ABQ98124.1| leucyl aminopeptidase [Haemophilus influenzae PittEE] gi|229809749|gb|EEP45473.1| leucyl aminopeptidase [Haemophilus influenzae 7P49H1] Length = 358 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 130/360 (36%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L T L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTIMKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|215489604|ref|YP_002332035.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|215267676|emb|CAS12134.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] Length = 360 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMQVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + N I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSIRGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 359 >gi|315634607|ref|ZP_07889891.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC 33393] gi|315476555|gb|EFU67303.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC 33393] Length = 355 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 138/360 (38%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY K L T L + L +I E +G+ Y I + +P Sbjct: 1 MNTLERYIGKSILGTIFATLFMLVGLSAIIKFVEQFRSVGK-GTYDILQAIAYTVLTMPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ NL SELV+ ++ G S ++ + +I L + T+++ Sbjct: 60 DVETFFPMAALLGALIALGNLASRSELVVMQSSGFSRIRIGIAVMKTTIPLVLLTMVIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ D+ + G W + N + + + ++ D Sbjct: 120 WGIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYV-----RSISDDVELNDIYI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 T +++ ++ K A+ A N K L++V E + I++ + + D Sbjct: 175 YTFNEQRQLEKMKHANQASFNNGKWTLRQVNESRIQPDEVVTINRLNEDWETNLTPDKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + ++F ++ E ++ ++ P+ + M ++A S Sbjct: 235 VASLRPTSLSISGLSNYIAFLKETGQDSRN-FELTYWRKLLQPVSVGVMMMLALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF+ Y + + F P+ AL+P +L + ++ +L ++ Sbjct: 294 LRSVTAGARILIGISFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLLITWWLLARR 353 >gi|294507117|ref|YP_003571175.1| conserved hypothetical protein, membrane [Salinibacter ruber M8] gi|294343446|emb|CBH24224.1| conserved hypothetical protein, membrane [Salinibacter ruber M8] Length = 410 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 121/362 (33%), Gaps = 10/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 R+ K LK + F+ ++ V+ E + + V VP Sbjct: 50 MSTFERHIIKRLLKGFVLFVGALLVFFIVLHWVEYSDDFLDGGATIWEVFTVFYPNYVPE 109 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II+ P + I + L + +LV + G+S++QL+ P++ +L+ +F Sbjct: 110 IIRLTSPLALFLSCIYLTGTLAQELQLVALQTSGVSLYQLMRPYLGVGLLVTVFMFGFNG 169 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + ++ K + H + Sbjct: 170 WVVPKTNEVVVRYENEYLPGNQKSVQTSEIHRRNGPNSILSVGYYDADRERAHT---VSL 226 Query: 182 ITIDKKNKIIHRKDADLAIIYN--DKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMD 235 + ++ R DA+ + + +L V + + + S + + Sbjct: 227 QQLAGDARLARRVDANRMEWDDSLEVWRLDDVTRRTFVKGETQRKRTIASLDTTLQVYPR 286 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + A+ + + ++ +S + R +Y P + + LI ++ Sbjct: 287 DLARSKNDVAAMTIPAAAEYLAALRRSGVGGLTRPLVAYYNKFAYPFANLLLVLIGVPIA 346 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + A G+ F+ ++ + + G +G L P A +P + +++L+L Sbjct: 347 -STRRRGGQAVRFAIGLLIAFVYLSVQKLAEPLGYAGTLSPAWTAWLPHLTFAVVALLVL 405 Query: 356 LQ 357 Sbjct: 406 WW 407 >gi|170767103|ref|ZP_02901556.1| putative permease [Escherichia albertii TW07627] gi|170124541|gb|EDS93472.1| putative permease [Escherichia albertii TW07627] Length = 360 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 124/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMMLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAMGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA GE++ + Q G + W + N I F Sbjct: 123 WIAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNE 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 NRRLQSVRYAASAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFVISLWLLMRK 359 >gi|315125734|ref|YP_004067737.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] gi|315014248|gb|ADT67586.1| hypothetical protein PSM_A0636 [Pseudoalteromonas sp. SM9913] Length = 355 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 131/361 (36%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y + L+TT + L+ + + +I E +G +Y I + +P Sbjct: 1 MMKTLDWYLGRSILQTTGFALMVLVGISTLIKFIEQLKSVG-RGSYDIMTAMLYTIYSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P L+ + L SELV+ +A G+S Q++ + +I + + + + Sbjct: 60 DDLVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAIFMALCVMALG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A + + ++ Q GD + W + +N +I + + +N + Sbjct: 120 EWGAPAAQLHAKEMRNQAIHGGDVFNAQKGVWAKDANNFINI-----EDVDQNGMLRGVN 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGF 237 DK + A A+ + L+ V + I + + + Sbjct: 175 MYHFDKSLSLTQITKAKEAVGRDSGWLLRDVNKVMISEELITTEQVSEEFYPSQLTAEKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + S SF + +++ + N + + ++ P+ + M L+A S Sbjct: 235 GVVSVKPESLSFSGLWSYLAYL-QQNEQDTSTYDLALWRKLMQPVSIAVMLLVALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ + G+ +G + + I + + A++P IL + ++ + Sbjct: 294 PLRTVTMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSILFTGFAAYLMNK 353 Query: 358 K 358 + Sbjct: 354 R 354 >gi|255658902|ref|ZP_05404311.1| permease, YjgP/YjgQ family [Mitsuokella multacida DSM 20544] gi|260848851|gb|EEX68858.1| permease, YjgP/YjgQ family [Mitsuokella multacida DSM 20544] Length = 364 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 136/359 (37%), Gaps = 7/359 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y F+ K ++ + + + S+S + +P +I Sbjct: 5 ILDKYIFREVFKAFIFGICAFSAVFIGSGTLFKIAKYITDYGASLSAVIKVFVFGLPSVI 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ F L+ +SE+ ++ GI +++ P V+ L+ I + + Sbjct: 65 MWTFPMSMLLATLLTFGRLSSSSEITAMKSCGIGFYRIAAPAVIMGFLVSIGAIAFNEYV 124 Query: 124 ATSGEKIGID-LIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + + + N + + I I + + + A++ + + T Sbjct: 125 VPWANTAYRNVVYYEIQGNNGMKSQEHIILKDIQDGKIQRLVYARRYDGDTQTLQGVTMQ 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGFQ 238 ++ K+ H ++A+ A DK + + Y + ++ L I Sbjct: 185 DFNQDGKVSHVENAEYAEYSMDKWIMHNGMLYDISEGQSEHSMRFDTQVLPIKANPKQIV 244 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ +++ + E + Y I +P+ + LI + L+ Sbjct: 245 REQKDPEELTMKELRAQINIMKTQ-YVDTNKLEAELYQRITVPMASLIFALIGVPLGLQP 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R++ A + F Y ++T+ + +SG + P+ A IP I+ + +++ + Sbjct: 304 TRNSSSA-GFAMSVIIIFFYYALMTMGNALARSGAVAPIIAVWIPNIVGLIAGFILIRR 361 >gi|319776037|ref|YP_004138525.1| inner membrane protein [Haemophilus influenzae F3047] gi|329123195|ref|ZP_08251764.1| YjgP/YjgQ family membrane protein [Haemophilus aegyptius ATCC 11116] gi|317450628|emb|CBY86848.1| conserved inner membrane protein [Haemophilus influenzae F3047] gi|327471540|gb|EGF16984.1| YjgP/YjgQ family membrane protein [Haemophilus aegyptius ATCC 11116] Length = 358 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 129/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFSTLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|16273590|ref|NP_439845.1| hypothetical protein HI1703 [Haemophilus influenzae Rd KW20] gi|260581044|ref|ZP_05848866.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1176473|sp|P45332|LPTG_HAEIN RecName: Full=Lipopolysaccharide export system permease protein lptG gi|1574557|gb|AAC23349.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260092284|gb|EEW76225.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 358 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 128/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDTRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTIMKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|330873093|gb|EGH07242.1| hypothetical protein PSYMP_02386 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963183|gb|EGH63443.1| hypothetical protein PSYAC_00745 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 353 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 120/360 (33%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L + LV + + + + Y++ P Sbjct: 1 MVK-LDRYIGKSVFLAILAVLGIILGLVSLFAFIDEMGDINDT--YTLLDALSYVMMTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL + VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D + ++ A A D +LK V + + ++ + Sbjct: 173 RYRFDDQRHMLTSSFAKEAHFKTDYWELKDVSTTHFKEGRTEVVNAPDERWDVSLSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF I ++ P+ A LIP + +L + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLIPAAACAFAGLYLLRR 351 >gi|15602062|ref|NP_245134.1| hypothetical protein PM0197 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720420|gb|AAK02281.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 356 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 132/361 (36%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MMSTLDRYLGKSILGAIFATLIMLVGLSGIIKFVEQFRSVGK-GTYDIWQAILYTVLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELV+ +A G S ++ + ++ L I T+L+ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVVMQASGFSRLKIGFAVMKTALPLVILTMLIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + N I I D Sbjct: 120 EWGIPQTEQFARDMRSKAISGGSLLSVKNGIWAKDGNEFIYIKRITDDIA-----LSDVY 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVV---EYQYGRIPIDKNSTTLNIPIKMDGF 237 + ++ K A+ A K L ++ + +++ + + D Sbjct: 175 IYRFAENRQLQQVKHANTATYQEGKWILHRLTESAISENEITTVNRVNAEWQTNLTPDKL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + S S + ++F ++ + E ++ + PL + M ++A S Sbjct: 235 GIASLRPTSLSISGLSNYITFLRETGQESK-KFELTYWRKLFQPLSVGVMMMLALSFIFG 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + GI GF+ Y + I + P+A AL+P +L + ++ +L + Sbjct: 294 PLRSVTAGARIVTGICFGFLFYVVNEIFGPLSLVYNVTPLAGALMPSVLFLLITWWLLSR 353 Query: 358 K 358 K Sbjct: 354 K 354 >gi|309972901|gb|ADO96102.1| Lipopolysaccharide export permease, LptG [Haemophilus influenzae R2846] Length = 358 Score = 139 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 130/360 (36%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + +G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSSGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|227824355|ref|ZP_03989187.1| permease [Acidaminococcus sp. D21] gi|226904854|gb|EEH90772.1| permease [Acidaminococcus sp. D21] Length = 362 Score = 139 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 125/364 (34%), Gaps = 7/364 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K L+ + + + Q S S L +P Sbjct: 1 MRILDKYILKQMLQPFAFGVAAFSTIFVASSFLFRVTQYITQYGASYSSLFRLFLCLMPE 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I P L+ +++ L+ SE+ R+ G+S ++ P + ++ +F+V+ Sbjct: 61 VINYTFPMSMLLASLLTMGQLSGNSEITAMRSGGMSFRRIAMPILAAGFVVSLFSVVWAE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + +IQQ N K ++ ++ + Q + + E + Sbjct: 121 KVVPPAKAEYERIIQQEIKNNTKPRTQDHILLKNISKGQLTRLTYARTFDEKAGVMKDIT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP-----IDKNSTTLNIPIKMDG 236 I K +++ + A N ++K + + + L I Sbjct: 181 IEDWDKGRVVRIQRTPEAKWQNGTWIMEKGTITEITNEEGLTRTMTFDKQVLPITETPKT 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + E+ + + + Y +PL LI + + Sbjct: 241 ITLDQKDPDEMTIGELKMYIGILE-RQYQPTSKYVMEIYSRFTVPLASFFFALIGVPLGV 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R+ + + + + F+ Y+I+T M G+ G++ P AA +P L ++ Sbjct: 300 QSQRAG-TSMGLGFSVVIIFIYYSIMTFMTGLGQGGVIPPFIAAAVPNFLCGCAGAYLIW 358 Query: 357 QKED 360 QK+ Sbjct: 359 QKDH 362 >gi|157960740|ref|YP_001500774.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] gi|157845740|gb|ABV86239.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] Length = 352 Score = 139 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 125/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + T+ LL L +I + +G +Y++ V +P Sbjct: 1 MKILDLYIARILISTSSLALLVLTGLSGIIKWVDQLRVVG-RGSYTMMDAGVYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ ++ G+S Q+ + +I L I +++ Sbjct: 60 DIELFFPMAVLLGALIGMGMLASNSELVVMQSSGLSRLQITMSAMKTAIPLMILVMMLTE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E ++ + G +S+ W + I + +++ D T Sbjct: 120 WVAPVAELRAKEIKRTKVSGGSLIESNRGIWAKDGPLFVSIGG-----VVDSNHLRDITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI---DKNSTTLNIPIKMDGFQ 238 + AD A + +L V + + + + Sbjct: 175 YEFSDTTDLTSTVHADSAEYRDKYWQLFDVRRTTLKDEQVVLVNLEQDKWISSLTPEKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + +N R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSIEGLLDYLDYLESNNQASE-RYELALWRKLMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L +A +P ++ ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYICSEIFGPLSIVYGLPAFISAGMPALIFSVGALYYIRK 352 >gi|302392908|ref|YP_003828728.1| permease [Acetohalobium arabaticum DSM 5501] gi|302204985|gb|ADL13663.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] Length = 364 Score = 139 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 129/364 (35%), Gaps = 9/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY L L+ + + D+ + S L +P Sbjct: 1 MKIIDRYLLTELLSPLLFGIFAFTSIFVGTDILFELADLMIEWGVSAVTAGQLFILSLPE 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I P L+ ++ F L+ SE+V +A G+S +L+ P ++ ++LL T+L Sbjct: 61 VIVLTFPMSMLLATLLSFGRLSGDSEVVALKAGGVSFIRLIIPVLIVALLLSGLTILANE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ--ISNPQQDIFIGAKKILPENHIWEDF 179 I + ++ K + + + +I + + + Sbjct: 121 TIVPQSKDAYRRIVWNIKHQEKMPTTQKNLRIAPLDKKTGKIDYIFYAYHFDGSDLTMEE 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKM 234 S+ + K++ +A A +++ + Y + T + + Sbjct: 181 VSLQDYQNGKLVQVIEAKRARWTDERWQFIDGTIYNVNSKDKVPTMEFETYTVKKLNREP 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + S E+ + ++ + + +Y IP LI A + Sbjct: 241 KEISRAQKDPDEMSIEELNRHINLKEEEG-KDVASLKVLYYQRYAIPFSCFIFALIGAPL 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ +RS I + I F+ YT++TI + G++G L P A + I+ + + Sbjct: 300 GLQPNRSG-ASIGLGLSIVIIFIYYTLMTIGSTLGQTGTLPPAVGAWLQNIIFGLVGTGL 358 Query: 355 LLQK 358 +++ Sbjct: 359 IIKM 362 >gi|120599781|ref|YP_964355.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|146292283|ref|YP_001182707.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|120559874|gb|ABM25801.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|145563973|gb|ABP74908.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|319425583|gb|ADV53657.1| inner membrane component of lipopolysaccharide transporter, LptG [Shewanella putrefaciens 200] Length = 352 Score = 139 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 120/359 (33%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T+ LL L +I + +G Y++ + +P Sbjct: 1 MKILDLYIARVILSTSALCLLVLTGLSGIIKWVDQLRLVG-RGTYTMMDAGIYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ + G+S Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQVSGLSRLQITLSAMKTAVPLMLMVMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E+ +L G KS W + + +I + + T Sbjct: 120 WGAPVAEQKANELQAIKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VENITKLNNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 + + K+ A+ A+ D +L V + + D Sbjct: 175 YKFNSELKLTKVVHAERAVFTRDSWRLFDVKRTDLTYDQVTLEHLEEDIWQSSLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + ++ R E ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSIQGLLGYLDYLKTNSQ-DPSRYELALGRKLMQPVTVGVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A+ P +L ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYISNEIFGPMSIVYELPAYVGAMAPSLLFTGIAFYFIRR 352 >gi|261867782|ref|YP_003255704.1| permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413114|gb|ACX82485.1| conserved permease [Aggregatibacter actinomycetemcomitans D11S-1] Length = 355 Score = 139 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 133/360 (36%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY K L T LL + L +I E +G+ Y I + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGK-GTYDILQAIAYTVLTMPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ NL SELV+ ++ G S ++ + ++ L + T+++ Sbjct: 60 DVETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGFAVMKTTLPLVLLTMVIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ D+ + G W + N + + D Sbjct: 120 WGIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYVRRITDDVE-----LNDIYI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 T +++ ++ K A+ A + K L++V E + I + + D Sbjct: 175 YTFNEQRQLEKLKHANRATFNSGKWTLQQVNESRIQPENIQTTNRLNEEWQTNLTPDKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + ++F ++ E ++ + P+ + M ++A S Sbjct: 235 VASLRPTSLSISGLSNYITFLRETGQDSKN-FELTYWRKLFQPISVGVMMMLALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF+ Y + + F P+ AL+P +L + ++ +L ++ Sbjct: 294 LRSVTAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFLIITWWLLARR 353 >gi|237653448|ref|YP_002889762.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] gi|237624695|gb|ACR01385.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] Length = 358 Score = 139 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 119/362 (32%), Gaps = 9/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY + + L+ + L D +G+ Y++ + V +P Sbjct: 1 MSPVLLRYLAREIFAASALVLVAFLGLFAFFDFINELEDVGK-GGYTLYQALVYVGLTLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ + L + SE+ + RA G+S L + + + + LV Sbjct: 60 ARVYELMPIAVLIGTLYALATLAKNSEITVMRASGMSNALLTSVLGLIGGVFAVLIFLVG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + Q+ W++ + + + ++P+ + Sbjct: 120 EYVAPPAEAAAEEWKLTATQATVSQQLRSGLWVK----DGRLVLNVRTLMPDRSMRGARI 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGF 237 + + A + + KL V ++ + + + Sbjct: 176 YAFDEDYALESIAEAATGVFDGSGEWKLLDVQRTRFHGDRTEIERLPEIRWRSELTPEVL 235 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 F + ++ +N + R E + ++ P + M +A Sbjct: 236 GVLMVSPEHMPFGRLWTYINHLRDNNQ-NADRFEIALWKKLIYPFTALVMMALAMPFGFI 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ G + + + + G P AAL P ++ ++ + ++ + Sbjct: 295 HDRMGGASARIFMGVMLGVGFHLLNGLFSNLGMINAWPPFMAALTPSLIFLAAAFWLMHR 354 Query: 358 KE 359 E Sbjct: 355 VE 356 >gi|260582801|ref|ZP_05850587.1| permease [Haemophilus influenzae NT127] gi|260094127|gb|EEW78029.1| permease [Haemophilus influenzae NT127] Length = 358 Score = 139 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 129/360 (35%), Gaps = 2/360 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGAIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FT+++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E+ D+ + G W + + + ++ F Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKNGVWAKDGHHFVFVRRVTDDTKLDDIYIYTFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K K ++ ++ + I + S T + D Sbjct: 180 QQHNLIKLKHANQASYSEDEAKWTLRQVNHSTIMKDEIITTNHLSETWETSLTPDKLGAV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + +SF ++ R E F+ I P+ + M L+A S R Sbjct: 240 SLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSVGVMMLLALSFIFGSLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI GF+ Y + I+ + + ALIP +L I + +L +K D Sbjct: 299 SVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPSLLFIVMIWWLLSRKRD 358 >gi|170718033|ref|YP_001785073.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] gi|168826162|gb|ACA31533.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] Length = 356 Score = 139 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 134/360 (37%), Gaps = 4/360 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L T L LL + L +I E +G+ Y + + + +P Sbjct: 1 MMNTLDRYIGKNILGTILATLLMLVGLSAIIKFVEQFRSIGK-GTYDVIQATLFTLLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ +++ NL SEL++ ++ G S +++ + ++ L + T+++ Sbjct: 60 KDIETFFPMAALLGSLIALGNLASRSELIVIQSAGFSRFRIGLAVMKTALPLMLITMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E D+ + G W + I++G + ++ Sbjct: 120 EWGIPQTEHFARDMRAKAISGGSMLSVKNSIWAKDG--NDFIYVGRITNDISLNDIYIYS 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ++ H A + + + I++ + + D Sbjct: 178 FDDKRQLKQVTHANQASFEHGKWKLSGINQSQIFADEIKTINRLKDNWSTTLTPDKLGIA 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + + F ++ R E F+ + P+ + M L+A S R Sbjct: 238 SLRPTSLSMTGLYNYIKFMKETGQ-DAKRFELTFWQKVFQPVSVAVMMLLALSFIFGSLR 296 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GIF GF+ Y I I+ + V AALIP +L + L +L +K + Sbjct: 297 SVTAGARIVTGIFFGFLFYVINEILGRLSLLYDIPIVLAALIPSLLFMILIWWLLNRKRE 356 >gi|193212079|ref|YP_001998032.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] gi|193085556|gb|ACF10832.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] Length = 383 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 124/345 (35%), Gaps = 9/345 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +L + L L +I+L E ++ + + + + +P Sbjct: 28 IIDRYIIRQFLTIFFFSLASFAALFIIINLIENLDRFMSRQ-IPVGQIIIYYLSGLPDTF 86 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ V L+ SEL +A G+S+ +L+ PF++ + + F ++ I Sbjct: 87 LLTSPLSVLLASLFVTGKLSMQSELPALKAAGMSLSRLMKPFLLATFFITAFNLVNSCFI 146 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + +Q+ + + + N + + + + + Sbjct: 147 TPAMYDLSKGYEKRYLKSQKEQQEEAVHIRESKNRILTVGQINRDRQSAVSVSLETFDGS 206 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQK 239 D+ + + + TL + + + F Sbjct: 207 RLASRLD---ADSLRISSNGRHWVFYNTKQRTFVNGRETLVANPGADTLKLALAKNTFTM 263 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + ++ +S + RAE + I +PL + + LI +S Sbjct: 264 IDADPDEMNLVQHLAFIAQKKRSGLPGLERAEVELQTKIALPLASMLIVLIGVPLSTRKK 323 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 RS + A + G ++ + S G G++ PV AA +P Sbjct: 324 RSG-LALEAATSLLIGLFYLGMLKTIGSLGYDGLINPVLAAWLPN 367 >gi|253997572|ref|YP_003049636.1| permease [Methylotenera mobilis JLW8] gi|253984251|gb|ACT49109.1| permease YjgP/YjgQ family protein [Methylotenera mobilis JLW8] Length = 356 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 128/361 (35%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY FK L L + + DL + +G +Y +S+ + A P Sbjct: 1 MKIITRYLFKEITVNVLLITLALIAMFSFFDLIQELESLGH-GSYGLSKILLFVALSAPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P LV + L R SEL++ R GIS++ L + +L + T L+ Sbjct: 60 HVYEVMPVAVLVGCMYSLGQLARYSELIVLRVSGISLYSLAATLIKIGMLFTVITFLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I EK+ + + D+ Q W++ + ++ + + + Sbjct: 120 LITPLSEKMAQRIRIKATDSVIVQDFKSGLWVKDGHSFVNVEE-----VLADTTLLNIHI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQ 238 D K + A + +++ LK V + + + T I+ + Sbjct: 175 YEFDDKFNLRTVSHAHKGLYEDEQWHLKSVSQTHLDKDSNHVEHLDKATWRSLIRPELLN 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + +N R + + +V PL + M ++A + Sbjct: 235 VLLVLPEKMSAWNLYAYIDHL-AANKQKTTRYKMALWAKLVYPLASLVMVILALPFAFIQ 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + GI G + T+ G P +A+ P L + + +L Sbjct: 294 QRATGASTKIFIGIMLGILYQTLNQTFVHLGLLNDWAPAFSAITPTALFLLGGLAMLHHI 353 Query: 359 E 359 + Sbjct: 354 D 354 >gi|119471262|ref|ZP_01613765.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] gi|119445728|gb|EAW27011.1| hypothetical protein ATW7_11360 [Alteromonadales bacterium TW-7] Length = 354 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 125/360 (34%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y + L+TT + LL + + +I E +G +Y + + +P Sbjct: 1 MKTLDWYLGRSILQTTGFALLVLVGISTLIKFIEQLKSVG-RGSYDLITAMLYTLYSIPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L+ + L SELV+ +A G+S Q++ + ++ + I + + Sbjct: 60 DLVVFFPMAALIGGLTGLGALASNSELVVMQAAGMSRLQIIGSVMKTAMFMAICMMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + ++ Q GD + W + N +I + + E+ Sbjct: 120 WGAPEAQLRAKEMRNQAIHGGDVFSAQKGVWAKDGNNFINI-----EDVDESGKLNGLHM 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 D ++ A AI D L+ V + I + + Sbjct: 175 YYFDSSLELTQITKAKEAISRKDGWLLRDVNKVIITDELITTELHPEEFYPSQLTAEKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S SF + +S+ N + + + P+ + M L+A S Sbjct: 235 VVSVKPESLSFTGLWSYLSYLE-QNEQDTSTYDLALWRKFMQPVSVAVMLLVALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + G+ +G + + I + + A++P ++ I + ++ ++ Sbjct: 294 LRTVTMGARIIMGVVTGIVFHLTNEIFGPVVMVYQIPAIIGAVLPSVIFIGFATYLMNKR 353 >gi|170725440|ref|YP_001759466.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] gi|169810787|gb|ACA85371.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] Length = 352 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 124/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + T+ LL L +I + +G +Y++ + +P Sbjct: 1 MRILDFYIARTLVSTSALCLLILTGLSGIIKWVDQLRVVG-RGSYTMLDAGIYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ ++ G+S Q+ + ++ L + + + Sbjct: 60 DIEMFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITLSAMKTAVPLMLIIMALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + E+ +L G KS W + + +I + + + + T Sbjct: 120 WGAPAAEQKAYELQATKISGGSLIKSSRGIWAKDGDLFVNIGE-----VEDINNLRNITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 + + A+ + D +L V + + + D Sbjct: 175 YKFNSDLALTRTIHAERGVFSKDHWRLLDVRQTDLTDERVTLTDLTLYRWESTLTPDKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S +I + + +N R E + + P+ + M L+A S Sbjct: 235 VVSVKPESLSIQGLIGYLDYLEVNNQ-DASRYELALWRKFMQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L A++P ++ +I + + Sbjct: 294 LRTVTMGARVLLGVIAGFSFYISSEIFGPLTLVYGLPAYIGAMMPALIFGVGAIYFIRK 352 >gi|299138457|ref|ZP_07031636.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] gi|298599703|gb|EFI55862.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX8] Length = 785 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 15/368 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P IL Y +L+ L + L + E+ + + + +P Sbjct: 418 PLILDEYVMGSFLRNFGLVLTSLVGLFLIFTFFELIGDIIKYR-TPLVTVGEYLLNLIPF 476 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ + P +LV ++ F L+RTSEL +A G+S++++ P ++ ++ L Sbjct: 477 ILYNVTPLCSLVAVLITFGALSRTSELTAMKATGVSLYRIATPVLLVALALSAILFAFDE 536 Query: 122 PIATSGEKIGIDLI-------QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + + L Q D++ + + Sbjct: 537 TYLPAANRKQEALRSVIKGKPAQTFLRADRKWMSGQTLGNKEPTRIFYYQFFDSDKNVFA 596 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-----STTLN 229 F + ++ + + + I ++ Sbjct: 597 NLTVFEFQPGTFTLTRRIFATSARWDDSVNRWVFENGWQRTFSGDAISSYQPFTLNSFPE 656 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 I + F+K Q S+ E+ K + +S F R Q I PLM + M + Sbjct: 657 IHEQPGYFKKEDRQSQEMSYSELSKYIRDLKQSG-FDTTRLRVQLNRKIAYPLMALVMAI 715 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 +A +L + + GI + I I ++ G L + AA P IL Sbjct: 716 LAVPFALSTGKRGGLA-GMGAGIGVAISYWVIAAIFENLGNVNSLPSILAAWSPDILFAM 774 Query: 350 LSILILLQ 357 + +LL+ Sbjct: 775 VGTYLLLR 782 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 42/370 (11%), Positives = 99/370 (26%), Gaps = 12/370 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY + + L + ++F+ L + + S + L +P Sbjct: 1 MRIFTRYILREVVGYALLGGVLFTFILFMRYLLALME-LAVHGAASFADILRLIGYLLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP L+ ++ L SE+ RA G+ + + + ++L ++ Sbjct: 60 FLTLTIPMAVLIGILLGLSRLAADSEITAMRASGMGVLSFVRIVSIVAVLSWAVGLVNSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + Q + + + F + Sbjct: 120 YVAPRAAAALLQYEAQGASGEAAIQVQPRVFYEDFKNYVLYVQDVVPGSGAAEWKNVFLA 179 Query: 182 ITIDKKNKIIHRKDADLAIIYND-----KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 I L +++L + ++ + ++ Sbjct: 180 DLTQPATPHIITSQEALVTGTPGDPQTLRMQLSDGSRHDIAGNNPNQYDISTFASTELPI 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNK-----SNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 E+ + S + + + + + P + + L+ Sbjct: 240 QTGQQEEDSHISRRDTPIQALSMGELWKFAHGSGDTQPYFIELHRRFSYPAACLVLMLVG 299 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 + L R A + F Y + + + + G L A I+ Sbjct: 300 VPLGLSSKR-GGKGTGFAITLVLVFAYYILSFVGSALARQGKLSAFAGVWGANIIFGVAG 358 Query: 352 ILILLQKEDG 361 +L+L Q G Sbjct: 359 VLLLQQMSRG 368 >gi|91792233|ref|YP_561884.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] gi|91714235|gb|ABE54161.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] Length = 351 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 132/357 (36%), Gaps = 10/357 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL Y + L T+ LL L +I + +G +Y++ + +P I Sbjct: 2 ILDLYIARAILATSSLCLLILTGLSGIIKWVDQLRLVG-RGSYTMIDAGIYVLFLIPRDI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P L+ ++ L +SELV+ +A G+S Q+ + ++ L + +++ Sbjct: 61 EMFFPMAVLLGALIGMGMLASSSELVVMQASGMSRLQISMSAMKTAVPLMLLVMVLGEWG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A E+ +L G KS W + + +I + + + T Sbjct: 121 APVAERSAKELQATKLSGGSLIKSHRGIWAKDGDLFVNIGE-----VETVNSLNNITLYE 175 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI---DKNSTTLNIPIKMDGFQKF 240 D+ K++ A A ++ +L++V + I ++ + N + D Sbjct: 176 FDEAMKLVKVIHAQEAQFKDEAWQLQQVKTTVFSDEKITLVEQPLQSWNSSLTPDKLGVV 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + + S ++ + + N R + I+ P+ + M L+A S R Sbjct: 236 SVKPEALSIQGLLDYLDYLEV-NQQDPSRYNLALWRKIMQPVTIAVMMLVALSFVFGPLR 294 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + V G+ +GF Y I L A+ P +L + ++ + + Sbjct: 295 TVTMGARVLLGVVAGFGFYISNQIFGPMSIVYELPAAVGAIAPSLLFTTAAVYYIRK 351 >gi|313159015|gb|EFR58390.1| permease, YjgP/YjgQ family [Alistipes sp. HGB5] Length = 367 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +L T + + +I+V + D E + EL +P Sbjct: 8 FKILDRYILGKFLATYFFAIAMIIIVVVLFDYVEKIDDFTELHAPLRDVIFDYYLNFIPF 67 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I Q T + I + +E+V + G+S +L+ P+ +G++++G ++ + Sbjct: 68 FINQFSGLFTFIACIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIGSLSLTLNL 127 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ ++ Q+ K + + QI G + Sbjct: 128 WLIPISQRHIVNFESQYIKRKQNNKFNRHIYRQIEPGTFAYIRGYNDASQQASFLALEHY 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD--GFQK 239 + + E+ + + L+ I ++ + Sbjct: 188 YSGTMTRSLEASDVKFNPETKCWTAPRYTKREFDSLGVEKFEQFRNLDTLINLEVTELGE 247 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ + + E+ + + E + + PL +TLI S+S Sbjct: 248 INDLIQTMNITELNEFLDQQRAKGSDAINIIEVEKHARFAYPLSTFILTLIGVSLSSRKV 307 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + G F + F KSG L P A +P I+ + +++ + Sbjct: 308 R-GGTGLHIGIGTGLCFSYILFNRFFEEFAKSGTLPPGLAVWLPNIIYLFIAVYL 361 >gi|28868484|ref|NP_791103.1| hypothetical protein PSPTO_1273 [Pseudomonas syringae pv. tomato str. DC3000] gi|213968382|ref|ZP_03396526.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301384648|ref|ZP_07233066.1| hypothetical protein PsyrptM_18507 [Pseudomonas syringae pv. tomato Max13] gi|302058899|ref|ZP_07250440.1| hypothetical protein PsyrptK_02847 [Pseudomonas syringae pv. tomato K40] gi|302133012|ref|ZP_07259002.1| hypothetical protein PsyrptN_16559 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851722|gb|AAO54798.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213927020|gb|EEB60571.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|331015231|gb|EGH95287.1| hypothetical protein PLA106_04712 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 353 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 120/360 (33%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L + LV + + + + Y++ P Sbjct: 1 MVK-LDRYIGKSVFLAILAVLGIILGLVSLFAFIDEMADINDT--YTLVDALSYVMMTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL + VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWSVMKPMLLLMVAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D + ++ A A D +LK V + + ++ + Sbjct: 173 RYRFDDQRHMLTSSFAKEAHFKTDYWELKDVSTTHFKEGRTEVVNAPDERWDVSLSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF I ++ P+ A LIP + +L + Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLIPAAACAFAGLYLLRR 351 >gi|330504704|ref|YP_004381573.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] gi|328918990|gb|AEB59821.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] Length = 354 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 121/356 (33%), Gaps = 10/356 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY L L + L + + + +Y + + P Sbjct: 4 LDRYIGTQVFFAILAVLGIILGLALLFAFIDELGDL-NKGDYGLGQALWYVLLTAPRRAY 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +++P L+ ++ L SEL I RA G+SI +++ + ++L + +L+ +A Sbjct: 63 EMLPMAALIGCLIGLGTLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGILIGEYVA 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E + G Q S W + I + + T Sbjct: 123 PLTENQAQADRALAQGGGAAQSSKRGMWHRQGQEYVHI-----NAVQPGGVLLGVTRYRF 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQKFS 241 D + +++ A A ++ L V + + +I + + Sbjct: 178 DDERRLLSASFARRAEYRDNHWMLSNVKTTLLHEDHSEVVNQREERWDIELNPELLGTVV 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + S + + + + ++ +N R F+ ++ PL+ A+ L+A S RS Sbjct: 238 MEPEALSVTGLWQYIHYLSEQG-LNNARYWLAFWTKVLQPLVTGALVLMAISFIFGPLRS 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V G+ GF+ ++ P+ A L+P + + +L + Sbjct: 297 VTLGQRVFTGVLVGFIFRIAQDLLGPSSLVFGFSPLLAVLVPAGICALAGVWLLRR 352 >gi|298369120|ref|ZP_06980438.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] gi|298283123|gb|EFI24610.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] Length = 356 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 135/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ ++ ++P Sbjct: 1 MKLIPRYIIRQMSVMAVYALLAFLALYSFFEVINEMGDVGK-GSYTGAKMVQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ ++ L SEL + +A G+S +LL ++ + TV++ Sbjct: 60 RAYELMPLGVLIGGLIALSQLASGSELTVIKASGMSTKRLLAVLSQFGLIFALATVVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + ++ + + + +Q+ I +++LP++ + Sbjct: 120 WVAPDLSRRAENMKASAINGRISAGASG-----LWMKEQNNIINVREMLPDHTLLGVKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 D+ + A+ + +LK V ++S + ++ Sbjct: 175 QHDDRYQLASAAEAESAALNPDGSWQLKNVSRSVLKGEQVAVSSESSQRWPVALQSGLLD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S E+ ++ SN ++ ++ P+ M L+A + + + Sbjct: 235 VLLVDPDQMSVSELTTYIAHLK-SNHQKTDTYSVAWWRKLMYPIAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A ++P ++ L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLVFHFAGRLFGFTSQLYSVPPFLAGMLPTVIFALLAVYLIRRQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|152978628|ref|YP_001344257.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] gi|150840351|gb|ABR74322.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] Length = 354 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 65/362 (17%), Positives = 131/362 (36%), Gaps = 11/362 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY K L T LL + L +I E +G+ Y + + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLTLVGLSAIIKFVEQFRSVGK-GTYDSLQAVLYTILTIPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ NL SEL++ ++ G S ++ + +I L + T+++ Sbjct: 60 DVETFFPMAALLGALIALGNLASRSELIVMQSAGFSRLKIGIAVMKTAIPLVLITMVIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ D+ + G W + N + + + Sbjct: 120 WGIPQTEQYARDMRAKAISGGSLMSVKNSVWAKDGNDFIFVRQVREDANLRD------VY 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 I ++ A+ A K +L ++ I + + D Sbjct: 174 IYHFDNRQLQRLSHANSATYERGKWQLHQLNVSDIQAEQIFTKNYVSQEWKTSLTPDKLG 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + ++F +++ + + E ++ + P+ + M ++A S Sbjct: 234 IVSLRPTSLSISGLSEYIAFLHQTGQ-DSKKFELTYWRKLFQPISVGVMMMLALSFIFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF+ Y I I + P+ AL+P IL + ++ +L +K Sbjct: 293 LRSVTAGARIVTGICFGFLFYVINEIFGPLSLVYNVTPIVGALMPSILFLVITWWLLSRK 352 Query: 359 ED 360 D Sbjct: 353 RD 354 >gi|330811513|ref|YP_004355975.1| permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379621|gb|AEA70971.1| Putative permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 353 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 123/360 (34%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY L L + L + + + + + Y+++ A P Sbjct: 1 MVK-LDRYIGSSVFMAILAVLGIILGLATLFAFIDEMSDVSDT--YTLTDVASYVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P L+ ++ +L SEL I RA G+SI +++ + ++L + VL+ Sbjct: 58 RRLYDMLPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGVLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA + E + GD Q + W + + I + N I T Sbjct: 118 EYIAPATENTAQANRSLAQGGGDAQSAKHGLWHRQGDEFIHI-----NSVQPNGILYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D + ++ A A D +L V + + ++ I Sbjct: 173 RYRFDDQRHMLSSSFAKRANFAEDHWQLSDVTTTLFHDKRTEVVAAPQERWDVSISPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + +N R F+ ++ PL+ A+ L+A S Sbjct: 233 STVVMAPESLSITGLWGYIHYLADQG-LNNGRYWLAFWVKVLQPLVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF ++ P+ A L+P + + +L + Sbjct: 292 PLRSVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICALAGLWLLRR 351 >gi|218778208|ref|YP_002429526.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759592|gb|ACL02058.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 129/357 (36%), Gaps = 9/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + K L L +++ +D E + + R+P Sbjct: 1 MKIISKYIARALFKNLLTILFAVVVIYVAVDFFEKIDDFM-AAKIPLLTVGYFFLLRIPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q++P L+ +VV + R +E++ + G S + LL P V ++ +F Sbjct: 60 VAAQVLPVGVLLSAMVVIGLMARHNEIIAYASGGGSSFSLLKPIAVMGVIASLFLFAFNE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + Q + + + + K +PE H D T Sbjct: 120 IIVPAAAAEANQIWYQDVRKEGDVGTRTTWF-----HRNGLIGRVDKYIPETHTARDITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM--DGFQK 239 D K+I R DAD A I L+ +E GR + L + + D Sbjct: 175 NYYDPSFKLIKRIDADDATISGTVWTLRNAMESVSGRASDIRQHKELKVEMDFTADQLHD 234 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ S ++ + + + R I PL+ + M+++ +++L Sbjct: 235 RVKRSDEMSLVQLKEHIHKIESEG-YKAVRFRVDLASKISFPLVCLIMSVLGGAMALRGK 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + G+ F + + ++ S G +G+ P+ +A + L+ + + Sbjct: 294 RGEGLAVNIVMGMGLAFAYWVVHSLCLSLGYAGMYSPIFSAWTANAVFAVLAAVFIY 350 >gi|223936058|ref|ZP_03627972.1| permease YjgP/YjgQ family protein [bacterium Ellin514] gi|223895280|gb|EEF61727.1| permease YjgP/YjgQ family protein [bacterium Ellin514] Length = 372 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 119/372 (31%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L Y L G +I DL +Q E + VP Sbjct: 1 MRLLDRYLLRELLIPLRYCLGGFLIFWISFDLINSIHQFQEAK-LHLFDVVQYYLITVPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P L+ + N R E+ RA GIS+W++ P+V ++ + Sbjct: 60 FLVIVLPMALLLALLYTLSNHARHHEITAIRAAGISLWRICIPYVAVGLVFSAAVFAINE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ D++ ++K N + + +D Sbjct: 120 YWIPDSDQKAQDILDKYKPNRPDGSNKDVYRNFGIPNGRDKRTWDIGSYNLKTEIMTDPK 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD------ 235 ++ N + HR A+ A ND V E++ + N+ + Sbjct: 180 VSWIDTNNLPHRLIAERAERTNDVWTFYNVTEFETMPDGFMGPTMKTNVVAHPEFSETPD 239 Query: 236 ----------GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 + + A +I+ + + + TQ + + P + Sbjct: 240 QIRREIKFSKRLTSHNAKAAEVPIVDILDYLDLHPVLTKKNKWWLYTQLHGRLAAPWTCL 299 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + +A R + VA I F Y ++ + + G G + A +P Sbjct: 300 VVVFLAIPFGAASGRR-NIFVGVASSIVIVFAYYVLLKLGLALGTGGYVPAWVAGWLPDF 358 Query: 346 LTISLSILILLQ 357 + + I +LL+ Sbjct: 359 VFGAAGIWMLLR 370 >gi|254294287|ref|YP_003060310.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] gi|254042818|gb|ACT59613.1| permease YjgP/YjgQ family protein [Hirschia baltica ATCC 49814] Length = 368 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 155/364 (42%), Gaps = 8/364 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + Y F + L L + + ++D+ E +G S+ L A + P +I Sbjct: 6 IQTYIFWECVAGLLMTLGIILGAILLVDMVEQLRTVGARTELSLLGAFQLTALKAPQLIL 65 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +PF LV +++ + LNR+SEL RA G+S W+ L P + LG + +I+P+A Sbjct: 66 ETMPFAILVGSMLAYSKLNRSSELSAIRASGVSAWRFLAPTFFLAAFLGCIAMTIIDPLA 125 Query: 125 TSGEKIGIDLIQQWKDN----GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 T D+ D K W++ I + + +N ++ Sbjct: 126 TFSNAKYETEKTLLLDDTGAVKDSAKRQKKVWLRQGTDTTQSVIHGEVLPNDNSSLQNVE 185 Query: 181 SITIDKK---NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++K + R DA A + +L+ V EY PI ++ L + Sbjct: 186 IFILEKDGDEFEFQRRIDAKKATLRPGFWQLEGVTEYSSDNEPIKQDYLALTTTLDPSTI 245 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S SF+++ + + + ++ + + + L+ +P++L AM LI A V L Sbjct: 246 LDRGTDEKSISFWKLPQLIQDARRAG-LDADKYILKLHTLLAMPVLLGAMALIGAVVCLR 304 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS ++A GI +GF+L+ + + K SG P AAA P ++ + + I+ Sbjct: 305 LRRSGGVTQLLAAGIGAGFLLFFVNQVSKGLASSGATPPQAAAWAPALIALFSVLSIIAF 364 Query: 358 KEDG 361 EDG Sbjct: 365 AEDG 368 >gi|158521443|ref|YP_001529313.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510269|gb|ABW67236.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 359 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 131/358 (36%), Gaps = 10/358 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY LK + +++ +D E + +SR AV ++PLI+ Sbjct: 3 ILSRYIIAEILKALAVVMAVVIVIYVAVDFFEKIDDFLG-AGVPLSRMAVFFLFKIPLIV 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q P L+ ++VVF +NR +E+ ++ GI L P V + + ++V + Sbjct: 62 VQTAPVGVLIASLVVFGLMNRRNEVTALKSSGIGPASLFKPAAVVGVGCCVLLLIVSEIV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + Q I + + P D Sbjct: 122 VPRTISRANYIWLQQVRQKTSSVDQKNN---IWLKDDRTIVHIRHYQPREKKAFDVVLHD 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMDGFQ 238 +D+ ++ R DA + + L+ V++ Q+ ++ + + + + + Sbjct: 179 LDEGFRVTRRIDAARGLYDGGQWTLRNVLDQQFDVAGNVQLVEFRERLKIELDLLPEDLD 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +E F +++ ++ + + + + P + + M LI A++ + Sbjct: 239 RAAESADEMGFVQLLDRIRQVERQG-YSVVSHRVDLHAKLSFPFVCLLMGLIGAALGIMG 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 AYG+ + F+ + + S G G+L P+ AA ++ + ++L Sbjct: 298 RTRGGITANAAYGVGASFVYWIFHSFCISLGYGGMLPPLIAAWSANLVFGGATAAVIL 355 >gi|113460663|ref|YP_718729.1| permease [Haemophilus somnus 129PT] gi|112822706|gb|ABI24795.1| conserved permease [Haemophilus somnus 129PT] Length = 356 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 134/360 (37%), Gaps = 4/360 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L LL + L +I E +G+ Y + + + +P Sbjct: 1 MMNTLDRYIGKNILGAILATLLMLVGLSAIIKFVEQFRSIGK-GTYDVIQATLFTLLTMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ +++ NL SEL++ ++ G S +++ + ++ L + T+++ Sbjct: 60 KDIETFFPMAALLGSLIALGNLASRSELIVIQSAGFSRFRIGLAVMKTALPLMLITMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 E D+ + G W + S I++G + ++ Sbjct: 120 EWGIPQTEHFARDMRAKAISGGSMLSVKNSIWARDS--NDFIYVGRITNDIRLNDIYIYS 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ++ H A + + + I++ + + D Sbjct: 178 FDDKRQLKQVTHANQASFEHGKWKLSGINQSQIFADEIKTINRLKDNWSTTLTPDKLGIA 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S S + + F ++ R E F+ + P+ + M ++A S R Sbjct: 238 SLRPTSLSMTGLYNYIKFMKETGQ-DAKRFELTFWQKVFQPVSVAVMMMLALSFIFGSLR 296 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GIF GF+ Y I I+ + V AALIP +L + L +L +K + Sbjct: 297 SVTAGARIVTGIFFGFLFYVINEILGRLSLLYDIPIVLAALIPSLLFMILIWWLLNRKRE 356 >gi|156935579|ref|YP_001439495.1| hypothetical protein ESA_03443 [Cronobacter sakazakii ATCC BAA-894] gi|156533833|gb|ABU78659.1| hypothetical protein ESA_03443 [Cronobacter sakazakii ATCC BAA-894] Length = 360 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 69/356 (19%), Positives = 126/356 (35%), Gaps = 3/356 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + T + L + L +I + + GE +Y+ VP I Sbjct: 6 VLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLKKTGE-GSYTALGAGTYTLLSVPKDI 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q P L+ ++ L + SELV+ +A G + Q+ + +I L IFT+ + + Sbjct: 65 QIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAASVMKTAIPLVIFTMAIGEWV 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A GE++ +L Q G + W + N I + F Sbjct: 125 APQGEQMARNLRAQQMYGGSLLSTQQGMWAKDGNNFVYIERVKGENELGGISIYAFNDKR 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST-TLNIPIKMDGFQKFSE 242 + + D ++ + +I + T T + D + Sbjct: 185 RLESVRYAANAKFDAEHKLWRLSQVDESNLKNPQQITGSQTLTGTWKTNLTPDKLGVVAL 244 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + S + + + S R + + I PL + M L+A S RS Sbjct: 245 DPDALSISGLRNYVKYLKASGQ-DASRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSV 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + V GI GF+ Y + I + P+ AL+P +S+ +L+++ Sbjct: 304 PMGVRVVTGISFGFIFYVLDQIFGPLSLVYGIPPIIGALLPSASFFLISLWLLMKR 359 >gi|83945295|ref|ZP_00957644.1| hypothetical protein OA2633_00970 [Oceanicaulis alexandrii HTCC2633] gi|83851465|gb|EAP89321.1| hypothetical protein OA2633_00970 [Oceanicaulis alexandrii HTCC2633] Length = 367 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 83/368 (22%), Positives = 148/368 (40%), Gaps = 8/368 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G LWRY F L + + ++ +ID E +G S + L+ + P Sbjct: 1 MIGRLWRYLFIQTLIGLIGAAVIITAVILLIDFVETSRDIGTRVGISAFQALHLSLLKAP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L++Q +PFI L + FF LNR SEL++ RA G S W++L P + + L G + L + Sbjct: 61 LLVQDTLPFIVLFGVLFTFFRLNRRSELIVMRASGYSAWRILAPVAILAALTGAISTLAL 120 Query: 121 NPIATSGEKIGIDLIQ---QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 NP+ + + + + W++ + I I A++ ++ Sbjct: 121 NPLGAASNARFEATREALFEGEGQSSGANQSGPIWLRETTATGYIMITAQQQGGDDATLT 180 Query: 178 DFTSITIDKKNK----IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + + R A+ A + L +EY G + L + Sbjct: 181 EPVFRQYVLSESGAPLLDRRITAERAELNGGFWSLTNAIEYAPGGQATELGDVALPTNVG 240 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + + SF+++ ++ + + + E +++ L+ PLMLVA L+ + Sbjct: 241 RQALFERARSPGAVSFWQLPAVIASARDAG-LSSLAYELRWHGLLAQPLMLVAAALMGIA 299 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +L R A G +GF+LY +M G SG + P+ AA L + Sbjct: 300 ATLRLHRLGGAAGFAAAGATAGFILYFSQELMLGLGASGAITPLTAAWTTPALFSLAGLF 359 Query: 354 ILLQKEDG 361 + EDG Sbjct: 360 FIAATEDG 367 >gi|262045293|ref|ZP_06018318.1| YjgP/YjgQ family membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037349|gb|EEW38595.1| YjgP/YjgQ family membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 360 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 122/358 (34%), Gaps = 3/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + +Y + VP Sbjct: 4 FGVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKK-SGQGSYDALGSGLYTILSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQAFGFTRLQVALAVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + + I F Sbjct: 123 WVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAFNP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + ++ + S T + D Sbjct: 183 ERRLQSVRYAASAKFDSENKVWRLSQVDESDLTDPKQVTGSQMVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I PL + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + V GI GF+ Y + I + P+ AL+P +S+ ++++K Sbjct: 302 SVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRK 359 >gi|116624897|ref|YP_827053.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] gi|116228059|gb|ABJ86768.1| permease YjgP/YjgQ family protein [Candidatus Solibacter usitatus Ellin6076] Length = 777 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 124/367 (33%), Gaps = 11/367 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 +P ++ Y ++ + L + L + + E+ N M N S+ P Sbjct: 411 LPQLVDTYILSNFVTYLVLMLASFVSLELIRNFFELINDML-RNNISLKIMFKYLFFLSP 469 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +I Q++P LV + F +++ +E+ +A G+S+++L P +VGS+LL Sbjct: 470 QLIYQMLPVSILVAVLAAFGVMSKQNEITAFKACGVSLFRLAAPILVGSVLLSGGLFAFD 529 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIP-WMQISNPQQDIFIGAKKILPENHIWEDF 179 + +I L Q K + W + + E + Sbjct: 530 FYYVANANRIQDALRDQIKGRATQTYLRPDRTWKMGYDSLRIFNYRYFDNSGEESTMSEA 589 Query: 180 TSITIDKKNKIIHRKDADLAIIYN---DKVKLKKVVEYQYGRIP-----IDKNSTTLNIP 231 + ++ K + R+ +N + +Y + +T + Sbjct: 590 SVFELEPKTFRLQRQIFARQAHWNASLKTWVFEDGWTCEYKGPNCDAYARFQATTFRELT 649 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 D F K + + +F ++ + +S + + +FY +PL + M LIA Sbjct: 650 EPPDYFLKEARKDEQMNFLQLDSYIKDLTQSGFEGTSKLQVRFYRKFSLPLFALIMALIA 709 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 + I + + + G +L P AA P ++ Sbjct: 710 VPFGFLVGSRGAMT-GIGISIGIAVAYIALGQLFEKVGDVNLLSPATAAWAPDVVFALAG 768 Query: 352 ILILLQK 358 + L+ Sbjct: 769 TYLFLRM 775 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 43/369 (11%), Positives = 110/369 (29%), Gaps = 11/369 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY F+ L + + L A ++F+ ++ I + + + + + L A +P Sbjct: 1 MRLLGRYIFREILTSAVLGTLLASFILFLRSVDPIFELLVKSSSANTNLVLQLFALAIPN 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IPF LV ++ L E++ RA G+S +++ P ++ + L G Sbjct: 61 VLPFTIPFGVLVGILIGLGRLASDGEIIAMRAAGVSSRKVIFPVLLFAALGGGVAAFATL 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP-----------QQDIFIGAKKIL 170 + D++ Q + +++ ++ Sbjct: 121 RLTPYSIHKYTDIVNQLEATQLTADVPSRVFVENFPNTILYVGEVKPGNPSVWKNVFVAD 180 Query: 171 PENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 I + A + + Y + D +S Sbjct: 181 VAPPEKRSAGMRDKAMGPMITVAEQAIAVPDVTNNRLQLTLRNYSTHEMSKDLSSRDTIA 240 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 P + + + + + + +P+ + + ++ Sbjct: 241 PTGQQALTASPPSQTPLRSIGMGTRQLLAYPRGKPDWVEYQIELHKRFALPVACIMLAMV 300 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + + + V + F Y + + L A +P + + Sbjct: 301 GIPLGIATRKGGRSAGYVNAIFVAFFCYYMGFVSLIGLARQKTLPVPVALWLPNAVFFVV 360 Query: 351 SILILLQKE 359 ++ L + E Sbjct: 361 GVIFLARLE 369 >gi|292669943|ref|ZP_06603369.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292648414|gb|EFF66386.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 366 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 129/359 (35%), Gaps = 7/359 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y F+ + L+ + + Q S+ + +P ++ Sbjct: 7 ILDKYIFREVFSSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGVV 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ +++ F L+ SE+ ++ GI ++ P ++ ++ + + + Sbjct: 67 MWTFPMAMLLASLLTFGRLSSASEITAMKSCGIGFGRIAAPAILLGFIVSVGAIFFNEHV 126 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSI 182 ++I + KS ++ Q + A+ E + Sbjct: 127 VPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEEGQIRRLVYARSYDAEQERLTGISLQ 186 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGFQ 238 K+ H ++A+ A + + Y + + L + Sbjct: 187 VFGDDGKVTHVENAEYAEWTGTEWIMHNGDVYDIADEHLERRMRFETQVLPVQKDPRQII 246 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ +++ ++ + + E + Y + +P+ + TLI + L+ Sbjct: 247 REQKVPEEMTMRELRHQIA-LMQTQYVNTSKLEAELYQRVSVPMASLIFTLIGVPLGLQP 305 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R++ A + F Y ++T+ +F + +L P+ A IP I+ I ++L + Sbjct: 306 TRNSSSA-GFAMSVIIIFFYYALMTMGNAFARGEVLPPMLAVWIPNIVGIIAGTILLRR 363 >gi|251792101|ref|YP_003006821.1| permease [Aggregatibacter aphrophilus NJ8700] gi|247533488|gb|ACS96734.1| conserved permease [Aggregatibacter aphrophilus NJ8700] Length = 355 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 136/360 (37%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY K L T LL + L +I E +G+ Y I + +P Sbjct: 1 MNTLERYIGKSILGTIFATLLMLVGLSAIIKFVEQFRSVGK-GTYDIWQAIAYTVLTMPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ NL SELV+ ++ G S ++ + +I L + T+++ Sbjct: 60 DVETFFPMAALLGALIALGNLASRSELVVMQSSGFSRMRIGLAVMKTTIPLVLLTMIIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ D+ + G W + N + + + D Sbjct: 120 WGIPQTEQFARDMRSKAISGGSMLSVKNGIWAKDGNNFVYVRNISDDVE-----LRDIYI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 T +++ ++ K A+ A + K LK+V E +++ + + D Sbjct: 175 YTFNEQRRLEKLKHANHAAFNDGKWMLKQVNESTIQPDSVNTVNRLNEEWQTNLTPDKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + ++F ++ E ++ + P+ + M ++A S Sbjct: 235 VASLRPTSLSISGLSSYITFLKETGQDSKN-FELTYWRKLFQPISVGVMMMLALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI GF+ Y + + F P+ AL+P +L ++++ +L +K Sbjct: 294 LRSVTAGARILIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSMLFLAITWWLLARK 353 >gi|238897462|ref|YP_002923139.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465217|gb|ACQ66991.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 367 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 126/356 (35%), Gaps = 3/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 GIL RY + L T + L + L +I E ++GE NYS+ A+ VP Sbjct: 3 FGILDRYIGRSILNTIIMTLFMLVSLSGIIKFIEQLRKVGE-GNYSVFAAAIYTLLSVPN 61 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P L+ I+ L SELV+ +A G S Q++ + +I+L + ++++ Sbjct: 62 DIMIFFPMAALIGGILGLGALATRSELVVVQASGFSHMQIVLSVMKTAIILFLLSIIIGE 121 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ + G + W + + I F + Sbjct: 122 WLAPLADQTASHYRTKMIYGGSVISTQSGIWAKDKSDFIYINQVINHHELSGVHIYHFDA 181 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + + + S + + Sbjct: 182 HDRLISIRYAATAIFEKGAWQLSQIDESNLSDTKKIQGSQTL-SEKWETSLTPYKLGIVA 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S S + + + + + R E + + I P + M L++ S RS Sbjct: 241 MDPDSLSIMGLYDYVKYLKQVGQ-DSDRYELKMWQKIFSPFSITVMILLSLSFIFGPLRS 299 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + GI GF+ Y + I P+ A +P +L S+S+ +LL+ Sbjct: 300 TATGLRIVTGICFGFVFYLLDKIFGPLSLLYQFSPILGAALPSVLFFSISLYLLLK 355 >gi|146308540|ref|YP_001189005.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] gi|145576741|gb|ABP86273.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] Length = 354 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 119/356 (33%), Gaps = 10/356 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY L L + L + + + + +Y + + P Sbjct: 4 LDRYIGAQVFFAILTVLGIILGLALLFAFIDELSDL-NKGDYGLGQALWYVLLTAPRRAY 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +++P L+ ++ L SEL I RA G+SI +++ + ++L + +L+ +A Sbjct: 63 EMLPMAALIGCLIGLGTLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGILIGEYVA 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E + G Q S W + I + + T Sbjct: 123 PLTENQAQADRALAQGGGAAQSSKRGMWHRQGQEYVHI-----NAVQPGGLLLGVTRYRF 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQKFS 241 D + ++ A A D L+ V + + +I + Sbjct: 178 DDERRLQSASFARRAEHRGDHWVLRNVQTTFLHDNRSEVVNQREERWDIELSPQLLSTVV 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S S + + + + + +N R F+ ++ PL+ A+ L+A S RS Sbjct: 238 MEPESLSITGLWQYIHYLAEQG-LNNARYWLAFWTKVLQPLVTGALVLMAISFIFGPLRS 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V G+ GF+ ++ P+ A L+P + + +L + Sbjct: 297 VTLGQRVFTGVLVGFIFRIAQDLLGPSSLVFGFSPLLAVLVPAGICALAGVWLLRR 352 >gi|218679276|ref|ZP_03527173.1| permease YjgP/YjgQ family protein [Rhizobium etli CIAT 894] Length = 312 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 119/311 (38%), Positives = 182/311 (58%), Gaps = 2/311 (0%) Query: 52 AVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSIL 111 ++ A R+PLI+QQ +PFI L V + V LNR ELV++RA GIS+WQ ++PF+ GS+L Sbjct: 3 ILMTAVRLPLILQQTVPFIALFVGMTVLIGLNRKYELVVTRAAGISVWQFMSPFIAGSLL 62 Query: 112 LGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKIL 170 LGI T+ +NP+A G++ + + W+ + IPW++ + + D+ IGA + Sbjct: 63 LGILTMTALNPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAHTVQ 122 Query: 171 PENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 D I D ++I R+DA A + + +L VVE + G IP+ K S L Sbjct: 123 ENGTKLIDAVLIHFDSSGQVILRQDAATAKLEDGYWQLNNVVERKPGEIPVRKASVQLRT 182 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 +K D Q+ + F+++ +++ + I ETQF L+ PL+LVAMT I Sbjct: 183 NLKQDFVQERLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTFI 241 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 AA+VSL+FSR NQ R ++ GI SGF+LY I ++K+FG SG++ P A IPV++ ++L Sbjct: 242 AATVSLKFSRFNQSRSVILGGILSGFVLYVITVLVKAFGSSGVVPPFVATWIPVVVALAL 301 Query: 351 SILILLQKEDG 361 ILL +EDG Sbjct: 302 GATILLHREDG 312 >gi|254282266|ref|ZP_04957234.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR51-B] gi|219678469|gb|EED34818.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR51-B] Length = 353 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 123/361 (34%), Gaps = 12/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I RY + L T L + L + + + + + Y +P Sbjct: 1 MGKI-DRYIGRAILGGTFAVLGVLVGLDALSTIVDEAEDLSDR--YGFIDMMSYVGLTLP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + +PF L+ +V L +SELV+ R+ G+SI QL + ++L + +V Sbjct: 58 RRIHEFMPFAALIGALVGLGRLAGSSELVVVRSAGVSIGQLAISVMKPALLAAVVGFVVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + IA S E++ I + + + W + + + + Sbjct: 118 DFIAPSSEQLAITQRALAQRSESTVSARHGSWNRDGG-----TFIHVSAVQRGGVAYGLS 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 + D+ ++ +A+ D L++VV Q + N I D Sbjct: 173 LFSFDEDKHLVRSLNAERGTYRGDHWLLEEVVLTQLESEKTTVSQYLTWRWNTQITPDLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + S +++ F + E F+ + PL + + L+A S Sbjct: 233 VLEVVEPESLPVFKLWPWAKFLEQQG-LTATDIELAFWRKVTQPLAIAGLVLVAMSFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ G M L PV AA+ P++ I +L + Sbjct: 292 PLREGSMGARIFAGVIVGVMFRISQDFFGPASVLFGLPPVLAAITPILFCWLAGIWLLNR 351 Query: 358 K 358 + Sbjct: 352 R 352 >gi|37520500|ref|NP_923877.1| hypothetical protein gvip124 [Gloeobacter violaceus PCC 7421] gi|35211494|dbj|BAC88872.1| ycf84 [Gloeobacter violaceus PCC 7421] Length = 387 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 126/369 (34%), Gaps = 17/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + L+ + + I ++ ++ + R+P II Sbjct: 18 IMDRYLASELVLPFLFGVAAFASIGMAIGSLFELVRLISENGLPLTTALQVFLLRMPQII 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L ++ + L+ E+ +A G+SI +++ P ++ S+++ + T + Sbjct: 78 TYTFPMSVLFATLLAYGRLSGDLEITALQASGVSILRVVVPTLLLSVIVSVITFFFNEVV 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP----------QQDIFIGAKKILPEN 173 + + + + GD+ + + I + + + Sbjct: 138 VPTANQEASTTLARAIGGGDRPRFTKDNILYPEYNWVPGKAGEREYALIRLFYARRYSDG 197 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTL 228 ++ + + D+ D + + Y R + + Sbjct: 198 IMYGLTILDYSQENLNQVITADSAYFDPKTDAWRFRNGTSYLIGNDGTYRNILQFQEQQV 257 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMT 288 I F + + + E+ + + ++ Y IP + A Sbjct: 258 KISEDPLKFAQEVRRPEEMTTVELRRYIE-LAQNARQEIRGLLVSLYQKYAIPSVCFAFA 316 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 L+ A + L R++ + + I F Y + I ++ G++G+L P A +P ++T+ Sbjct: 317 LVGAPLGLRRQRTSN-ALGLGLSILIIFSYYIFLFIAQALGQTGVLPPWLGAWLPALITM 375 Query: 349 SLSILILLQ 357 ++ +L + Sbjct: 376 AVGAYLLWR 384 >gi|330827963|ref|YP_004390915.1| putative permease [Aeromonas veronii B565] gi|328803099|gb|AEB48298.1| Predicted permease [Aeromonas veronii B565] Length = 356 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 132/362 (36%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M GIL RY + + L + + L +I E +G+ NY + +P Sbjct: 1 MFGILDRYIGRVIFMSILLCEITLVGLAGLIKYVEQLKSVGD-GNYDMINALYYVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 P L+ ++ L +SELV+ +A G S ++ + +I L I L+ Sbjct: 60 KEAVLFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMIMVGLMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +++ D+ G S W + N +I + + T Sbjct: 120 EYVAPIAKRMADDIKAGALSEGRLTVSAYGVWARDGNNFVNING-----VRNDGALTGIT 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDG 236 + K+I A + LK+ ++ + + + Sbjct: 175 LYRFTPERKLIDVVQAQEGVFERHHWLLKQTQVTRFDDPAQIRSEQHDKMEWSSELTPKQ 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S + S ++ + + + +N R + + + ++ PL +VAM L+A+S Sbjct: 235 LGVVSIDPENLSVSGLLDYIGYLD-ANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + GI +GF +Y + + P+ AA+ P +L +S IL Sbjct: 294 GPLRSVSMGARMLMGIMTGFAVYVSDRVFGPISLVYAVPPILAAIAPSLLFGGISFYILS 353 Query: 357 QK 358 +K Sbjct: 354 RK 355 >gi|149279360|ref|ZP_01885491.1| hypothetical protein PBAL39_13617 [Pedobacter sp. BAL39] gi|149229886|gb|EDM35274.1| hypothetical protein PBAL39_13617 [Pedobacter sp. BAL39] Length = 367 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 113/355 (31%), Gaps = 3/355 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I+ Y YL T LY L ++++ + DL+E + ++ A +P Sbjct: 9 KIIDWYIISKYLGTFLYTLTLFVVIIVIFDLSEKLDDFLSNNLTFWQVVSLYYAGSIPFY 68 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + + P I + I + +E+V + G+S + L P+ + + ++ + Sbjct: 69 VNMLSPLINFIAVIFFTAKMADQTEIVPILSGGVSFNRFLLPYFISASIIFAANLGANLY 128 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + + D I + + K D + Sbjct: 129 VLPYTNTLKNTFENTYVKKNDPSSKSDIHMKLDARTYIYMRSFDNKNKTGAQFSLDNFNG 188 Query: 183 TIDKKNKI--IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + D+ ++ + + + + ++ D F + Sbjct: 189 DEMTRKIVADEIKWDSLKRSWKLTNYSIRDIKGLKETMTNGAGKTKDTILDMRPDDFSAY 248 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 F + S E+ K+ + Y + PL +TLI ++S R Sbjct: 249 DNIFENLSNQELSDKIKKEKIRGSGIMNDLLFERYKRYLHPLSAYVLTLIGVALSSRKVR 308 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + GI F K F G P+ A L+P I+ L +L Sbjct: 309 -GGVGLPLGIGILLSFTYIVFNQFAKMFSLKGEFPPLLAVLMPTIIFGILGFYLL 362 >gi|167622904|ref|YP_001673198.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] gi|167352926|gb|ABZ75539.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] Length = 352 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 123/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + T+ LL L +I + +G Y++ V +P Sbjct: 1 MRILDFYIARTLISTSSLALLVLTGLSGIIKWVDQLRLVG-RGTYTMMDAGVYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ L SELV+ ++ G+S Q+ + +I L I +++ Sbjct: 60 DIELFFPMAVLLGALIGMGMLASNSELVVMQSAGLSRLQITMSAMKTAIPLMIIVMMLTE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E ++ + G S+ W + + +I + + D T Sbjct: 120 WVAPVAELRAKEIKRTNISGGSLIDSNRGIWAKDGDLFVNIGG-----AADINNLRDITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 D + AD A + +L V + + + Sbjct: 175 YEFDDTTTLTSTIHADSAEYKDKYWQLYDVRRTTLTDDRVVLTNLKEEKWVSSLTPEKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + S ++ + + +N R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPEALSIEGLLDYLDYLKSNNQASE-RYELALWRKLLQPVTVAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y I L +A +P ++ ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYICSEIFGPLSIVYGLPAFISAGMPALIFSVGALYFIRK 352 >gi|313895766|ref|ZP_07829321.1| permease, YjgP/YjgQ family [Selenomonas sp. oral taxon 137 str. F0430] gi|312975595|gb|EFR41055.1| permease, YjgP/YjgQ family [Selenomonas sp. oral taxon 137 str. F0430] Length = 366 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 134/359 (37%), Gaps = 7/359 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y F+ + L+ + + Q S+ + +P ++ Sbjct: 7 ILDKYIFREVFVSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGVV 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ +++ F L+ SE+ ++ GI+ ++ P V+ ++ + +L + Sbjct: 67 MWTFPMSMLLASLLTFGKLSSASEITAMKSCGINFTRIAAPAVLLGFVVSVGAILFNEYV 126 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSI 182 ++I + KS ++ Q + A+ E + + Sbjct: 127 VPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEITDGQIRRLVYARAYDAEQQRLTNVSLQ 186 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLNIPIKMDGFQ 238 K+ H ++A+ A + + Y ++ + L + Sbjct: 187 VFGDDGKVSHVENAEYAEWTGKEWIMHSGDVYDIADEHMERHMRFETQVLPVQKDPRQII 246 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ ++++ ++ + + E + Y + +P+ + TLI + ++ Sbjct: 247 REQKSPEEMTMRELRRQIA-LMQTQYVNTNKLEAELYQRVSVPMASLIFTLIGVPLGIQP 305 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R++ A + F Y ++T+ +F + G+L P+ A IP I+ I ++ + Sbjct: 306 TRNSSSA-GFAMSVIIIFFYYALMTMGNAFARGGVLPPMLAVWIPNIVGIIAGAILFRR 363 >gi|304437499|ref|ZP_07397457.1| permease YjgP/YjgQ family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369549|gb|EFM23216.1| permease YjgP/YjgQ family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 376 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 134/359 (37%), Gaps = 7/359 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y F+ + L+ + + Q S+ + +P ++ Sbjct: 17 ILDKYIFREVFLSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGVV 76 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ +++ F L+ +SE+ ++ GI ++ P ++ L+ + +L + Sbjct: 77 MWTFPMSMLLASLLTFGRLSSSSEITAMKSCGIGFGRIAAPAILLGFLVSVGAILFNEHV 136 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSI 182 ++I + KS ++ Q + A+ E + Sbjct: 137 VPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEGGQIKRLVYARSYNAEQQQLTGVSLQ 196 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGFQ 238 K+ H ++A+ A + + K Y + + L + Sbjct: 197 IFGADGKVSHVENAEYAEWTGSEWIMHKGDVYDIADEHLERRMRFETQVLPVEKDPRQII 256 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ +++ ++ + + E + Y + +P+ + TLI + L+ Sbjct: 257 REQKSPEEMTMRELRHQIA-LMQTQYVNTSKLEAELYQRVSVPMASLIFTLIGVPLGLQP 315 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R++ A + F+ Y ++T+ +F + +L P+ A IP I+ I I++L + Sbjct: 316 TRNSSSA-GFAMSVIIIFIYYALMTMGNAFARGEVLPPMLAVWIPNIVGIIAGIILLRR 373 >gi|189345952|ref|YP_001942481.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] gi|189340099|gb|ACD89502.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] Length = 360 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 134/356 (37%), Gaps = 5/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L+R+ F+ ++ + L+ + L +I + E ++ + IS +P Sbjct: 1 MKLLYRHIFRQFMTSFLFASIAFAALFTLITMVENLDEFFDR-GIGISGIVWYYLLALPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q P L+ +I+ L+ +SEL R+ G+ + QL+ P+V+G +L+ +L + Sbjct: 60 TFQITAPVAALLASILTAGRLSASSELAAIRSAGVGMSQLMRPYVLGGLLISGINLLNAS 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + K I +Q + + I + + I + Sbjct: 120 FLEPAAAKEKISFEKQVLNETRSGLHEGTNIHVIEPENRIVTIESFDAKHLQASKVTVEQ 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + K + G I + TLN+ + + Q Sbjct: 180 FNGSRLISRKDASRMVFDPAIDRWIMQKAAIRSFGADPGEISFSTGNDTLNLLLSIQSLQ 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S Q + + + + ++ RA + + +PL + + I +S Sbjct: 240 ELSLQPEEMNLMQHYRYVKEKMQAGFPGLDRARVKLHAKTALPLASLVIIFIGVPLSTVK 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS +A +F GF+ + + S G +GI+ P AA +P+IL + L+ Sbjct: 300 KRSG-LAAEIAIALFIGFLFLGMQKTVASLGYNGIIEPWIAAWLPIILFLGAGALL 354 >gi|304413751|ref|ZP_07395195.1| inner membrane component LptG of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] gi|304283842|gb|EFL92236.1| inner membrane component LptG of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] Length = 358 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 78/362 (21%), Positives = 141/362 (38%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L T L L + L +I E ++GE +YS+ + VP Sbjct: 3 MFGVLDRYIGRNILHTILMTLFMLVSLSGIIKFIEQLRKLGE-GSYSVLGAGIYTLLSVP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ + L SEL++ +A G + Q+ + + +I L + T+++ Sbjct: 62 KDIEIFFPMAALLGVLFGLGTLASRSELIVMQASGFTRTQIASAVMKTAIPLVLLTMVIG 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E+I D + G + W + I + ++ Sbjct: 122 EWVAPLSERIASDYRTKMIFGGAILTTQSGLWARDGENFLYINH-----ILNDNTLSGVN 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT----LNIPIKMDG 236 ID++N+++ + A A ++ +L +V E S T I + D Sbjct: 177 IYHIDQENRLLSVRYAATATFKDNVWQLSQVDESDLSDAKKINGSKTLTGEWKINLTPDK 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S + + + N + R + + I PL + M L+A S Sbjct: 237 LGIVSVDPDSLPISGLRDYIQYLK-QNKQESLRYQLIMWNKIFSPLSVAVMMLVALSFIF 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R+ + V GI GF+ Y + I + PV AL+P +L + +S +LL Sbjct: 296 GPLRTVTMGVRVMVGIAVGFLFYVLNQIFGPVSLVYKMPPVIGALLPSLLFLLVSWYLLL 355 Query: 357 QK 358 ++ Sbjct: 356 KR 357 >gi|296104923|ref|YP_003615069.1| lipopolysaccharide export system permease protein LptG [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059382|gb|ADF64120.1| lipopolysaccharide export system permease protein LptG [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 360 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 115/347 (33%), Gaps = 3/347 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A GE++ + Q G + W + I F Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGQNFVYIERVKGDDELGGVSIYAFND 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 + + D ++ + +I + S T + D Sbjct: 183 ERRLQSVRHASSAKFDPEHKQWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVV 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + + + S R + + I P+ + M L+A S R Sbjct: 243 ALDPDALSISGLHNYVKYLKSSGQ-DAGRYQLNMWSKIFQPMSVAVMMLMALSFIFGPLR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 S + V GI GF+ Y + I + P+ AL+P Sbjct: 302 SVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASF 348 >gi|241760405|ref|ZP_04758500.1| permease YjgP/YjgQ [Neisseria flavescens SK114] gi|241319283|gb|EER55761.1| permease YjgP/YjgQ [Neisseria flavescens SK114] Length = 356 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 141/361 (39%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ ++ ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGK-GSYNSAKLGQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ ++ L SEL + +A G+S +LL ++ I TV + Sbjct: 60 RAYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 DK + + + +LK + G ++ ++ I +K + Sbjct: 175 QRNDKNELTQAAEAESAVLNPDGSWQLKNIRRSILGEDKVEVSTAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + K+N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIDHLEKNNQ-NTQVYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P +L L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTVLFALLAVYLIRRQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|317402625|gb|EFV83184.1| membrane protein [Achromobacter xylosoxidans C54] Length = 392 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 124/370 (33%), Gaps = 20/370 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + ++ L+ + L L + + +G+ +S+ + A +P + + Sbjct: 6 RYLAREIYRSCAVVLMALLGLFTFFALVDDLDNVGDK--FSMMALLYMQALAIPTRLYDL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +LL + +I L I L+ + Sbjct: 64 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLRMLWIVTIPLMIGAALLSEYVTPW 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + ++ + + W + I L + T K Sbjct: 124 AEMKSGEANLMFRGKAGGDRLNSGYWFKEPTANGGTRIINIAALQGDGQVTGVTLYEFKK 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-----------------NSTTLN 229 + A + + + LK V E + + T++ Sbjct: 184 DLTLSVLSTAPNGLFAHGDLVLKDVSETRLDDNAAETLADARPPKNPPAVVVKVPERTVD 243 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S ++ + + +N R + + P L+ M Sbjct: 244 TTLSAERLLARVLTPERMSIVTLLDYVDYLR-NNQLQYGRQVVALWRKLAYPFTLLVMIT 302 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 IAA + L +R V GI G + + + + G G P AL P I ++ Sbjct: 303 IAAPIGLMQTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLGKWPPWLTALGPNIGAMA 362 Query: 350 LSILILLQKE 359 L++ + E Sbjct: 363 LALGAMSYME 372 >gi|304311790|ref|YP_003811388.1| Predicted permease YjgP/YjgQ [gamma proteobacterium HdN1] gi|301797523|emb|CBL45743.1| Predicted permease YjgP/YjgQ [gamma proteobacterium HdN1] Length = 352 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 127/359 (35%), Gaps = 11/359 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY L + LL + L V + Y + + +P Sbjct: 1 MRLLDRYIGVSVLTSVAGMLLLIVGLDVVFSFIGELEDL--KNQYQMPQALQYILLTIPR 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P TL+ ++ L TSEL + RA G+S+ +++ V +L+ + +++ Sbjct: 59 RVYDYVPVATLIGCLIGLGMLANTSELTVIRAAGVSVMRIVWSAVKPVLLVVVGALVLGQ 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E+ L W D D S W + + + + + Sbjct: 119 YVVPKTEQYAQGLRTLWIDGSDTISSRNGFWYREGD-----EFFHVNAIQTDGVVYGLAR 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQ 238 D +++ + A+ + D +L+ V ++ + S+T I Sbjct: 174 YVFDGDQRLLEAEYAERGVFEGDHWRLENVRRTRFDQDHTQYATMESSTWRSQITPQLMS 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S ++ + ++ +I + + F+ + P + M IA S Sbjct: 234 LVVLKPTALSLTDLYTFARYRDQQSI-SSGQFYYAFWKKTLQPATTIVMVFIAISFIFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + GI G + ++ + P+ AA +P+ + + + I +L + Sbjct: 293 LRSVTMGQRLITGIIVGLVFTYAQDMLGHISVVYNVPPLIAAGLPIAIFLGVGIKLLRR 351 >gi|260596297|ref|YP_003208868.1| lipopolysaccharide ABC transporter permease [Cronobacter turicensis z3032] gi|260215474|emb|CBA27593.1| Lipopolysaccharide export system permease protein lptG [Cronobacter turicensis z3032] Length = 359 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 128/356 (35%), Gaps = 3/356 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + T + L + L +I + + GE +Y+ VP I Sbjct: 5 VLDRYIGRTIFNTIMMTLFMLVSLSGIIKFVDQLKKTGE-GSYTALGAGTYTLLSVPKDI 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q P L+ ++ L + SELV+ +A G + Q+ + +I L IFT+ + + Sbjct: 64 QIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVAASVMKTAIPLVIFTMAIGEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A GE++ +L Q G + W + + I + F Sbjct: 124 APQGEQMARNLRAQQMYGGSLLSTQQGMWAKDGSNFVYIERVKGENELGGISIYAFNDKR 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST-TLNIPIKMDGFQKFSE 242 + + D ++ + +I + T T + D + Sbjct: 184 RLESVRYAASAKFDAEHKLWRLSQVDESNLKNPQQITGSQTLTGTWKTNLTPDKLGVVAL 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + S + +++ S R + + I+ PL + M L+A S RS Sbjct: 244 DPDALSISGLRNYVTYLKASGQ-DASRYQLNMWSKILQPLSVAVMMLMALSFIFGPLRSV 302 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + V GI GF+ Y + I + P+ AL+P +S+ +L+++ Sbjct: 303 PMGVRVVTGISFGFIFYVLDQIFGPLSLVYGIPPIIGALLPSASFFLISLWLLMKR 358 >gi|319637673|ref|ZP_07992439.1| hypothetical protein HMPREF0604_00062 [Neisseria mucosa C102] gi|317400828|gb|EFV81483.1| hypothetical protein HMPREF0604_00062 [Neisseria mucosa C102] Length = 356 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 141/361 (39%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ ++ ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGK-GSYNGAKLGQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ ++ L SEL + +A G+S +LL ++ I TV + Sbjct: 60 RAYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 DK + + + +LK + G ++ ++ I +K + Sbjct: 175 QRNDKNELTQAAEAESAVLNPDGSWQLKNIRRSILGEDKVEVSTAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + K+N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIDHLEKNNQ-NTQVYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P +L L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTVLFALLAVYLIRRQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|229588598|ref|YP_002870717.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360464|emb|CAY47321.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 359 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 125/362 (34%), Gaps = 17/362 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY L L L + L + + + + Y++ A P + Sbjct: 4 LDRYIGSSVLIAILAVLGIILGLASLFAFIDEVGNVSDT--YTVWDVLSYVALTAPRRLY 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P L+ ++ +L +SEL I RA G+SI +++ + +LL +VL+ +A Sbjct: 62 DMMPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMACSVLIGEYVA 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E + +GD Q S W + I + + T T Sbjct: 122 PPAETTAQANRALAQGSGDAQSSKHGLWHRQGEEFIHI-----NAVQPGGLLIGVTRYTF 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---------STTLNIPIKMD 235 DK+ ++ A A +K +L V + I N S +I +K + Sbjct: 177 DKERHLLESSFAKRAQYSGEKWQLSDVTTTYFRNIGQGTNARTEVINVPSEEWDIALKPE 236 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 S + + + +N R F+ ++ P++ A+ L+A S Sbjct: 237 LLNTVVMIPESLPISGLWSYIHYLKDQG-LNNGRYWLAFWVKVLQPVVTAALVLMAISFI 295 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS V G+ GF ++ P+ A L+P + +L Sbjct: 296 FGPLRSVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPTAICALAGFWLL 355 Query: 356 LQ 357 + Sbjct: 356 RR 357 >gi|325954886|ref|YP_004238546.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] gi|323437504|gb|ADX67968.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] Length = 365 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 124/363 (34%), Gaps = 7/363 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L T + +L + +ID + +++ + Sbjct: 1 MKILDKYIVKNFLGTFFFMVLILTSIAIIIDFTQKLDRIDSTGSTVTEALIHFYPYWGVW 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ +P + I L +E+V + GIS ++L P+V+ + L ++V N Sbjct: 61 IVNTFLPVAVFISVIYFTSRLTAQTEIVGMLSGGISFYRLTRPYVIVAAGLAFTAMMVNN 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + +K + + + ++ + + + Sbjct: 121 VVLPWANIKKNKYQYEHLLSMRARKEYYKQQVISAQISSNEYVFVESYDRIEKRSDSYFL 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPIDK----NSTTLNIPIKMD 235 ++ + A + L+ V E + D +S + + D Sbjct: 181 YQKFDSVQLKEQIMASSFTWDDKDSSYILQNVFERKVLSPKKDSIAYLSSKKIKLKATPD 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + +E++K + + E + + P +T++A S+S Sbjct: 241 EILPEGYVAETMNSFELMKFIESQKNKGSANVVVYENELQQRVSSPFSTFILTILALSLS 300 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + +A GI F+ I +F + G + P AA IP ++ L+ + Sbjct: 301 -SKKRRGGIGVNLAVGITLAFVYIFFSQIATTFSEQGYVTPFVAAWIPNVVFGLLTTFLY 359 Query: 356 LQK 358 ++ Sbjct: 360 FRR 362 >gi|254498610|ref|ZP_05111329.1| permease [Legionella drancourtii LLAP12] gi|254352150|gb|EET10966.1| permease [Legionella drancourtii LLAP12] Length = 354 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 129/359 (35%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K L + L + L + L + +G+L +Y I++ A ++P Sbjct: 1 MRILDRYIAKTVLTSIGLVTLMLVGLQILFYLFDQLGDLGKL-DYGITQAAFFVLMQMPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P +L+ ++ + SELV+ RA G+SI Q+ + S+LL ++ Sbjct: 60 QVYLFFPMASLLGCLIGLGAMANHSELVVMRASGMSILQITGAVLKASVLLIFLVTVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + D G ++ W++ N + + N++ ++ Sbjct: 120 TVVPYLSHYANDYKTASVSGGQTIRTAKGFWLRHGNDFISVGR-----ILPNNVLQNIYQ 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 D+++ + + A V + ++ + ++P+K Sbjct: 175 FRFDEQHHLKLARLIREAKYSEQGWVAYNVQQTEFVVDHTRAQTFATLPWDVPVKPKILN 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + +E+ + + +S + + + F I+ P + M ++A Sbjct: 235 ISSIEPDEMTLHELNRYIREQKRS-HQNVHNYQFAFLQRIIQPFTTMVMMVLAIPFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + G GF + + L AAL P L L + ++ + Sbjct: 294 LRSSTMGSKLLVGAAVGFGFHILSRFFGPVSSVFQLPAGLAALGPTFLFALLGLYLMRR 352 >gi|253702061|ref|YP_003023250.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776911|gb|ACT19492.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 360 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 125/355 (35%), Gaps = 7/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + YLK L + + V+D E ++ S A+ T++P +I Sbjct: 3 ILTRYIARAYLKMLSLCLGSFLTIYLVVDFMEKVSRFT-RAGASWKHLALFFITKIPEMI 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ L+ TSEL R+ G+S++++ P +V S+L+ + + + + Sbjct: 62 IDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGEFV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + Sbjct: 122 LPKSFAQRTYIQEVLIQKKSASAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWDLQ 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNIPIKMDGFQK 239 + R +ADLA++ L+ V Q+ + + +K + Sbjct: 182 PGTGEPL-KRTEADLALLGPKGWVLRDAVVRQFRDGEVSATQKYRELPVQLQLKPADLKT 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + S S E+ + S + R TQ + I +P M + +L Sbjct: 241 LGKYSDSMSLVELNRYCRKLRASG-YDPTRYVTQMHSRISMPFGCAVMAFLGIPFALRGG 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS+ V I GF+ + +++ S G+ G+L PV AA + + Sbjct: 300 RSSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWL 354 >gi|323140935|ref|ZP_08075848.1| permease, YjgP/YjgQ family [Phascolarctobacterium sp. YIT 12067] gi|322414673|gb|EFY05479.1| permease, YjgP/YjgQ family [Phascolarctobacterium sp. YIT 12067] Length = 363 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 130/360 (36%), Gaps = 8/360 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY K L ++ + + + Q + A L +P +I Sbjct: 5 LLDRYVLKELLYPFVFGIAAFSSIFIASTMLFKITQYMTKYGAPLETVARLFMYNLPEVI 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ F L+ +SE+ +A G+S ++++ P +V + +F+++ + Sbjct: 65 NYTFPMSMLLAALMAFGKLSGSSEITAMKAGGVSYYRIVAPVLVVGFFVSMFSMVWAEKV 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ + + + + ++ + A K + D T I Sbjct: 125 VPTSKAKASIILNEEIRHNTRPTTQNHIIIKTISGDTQRVTYANKFDEKLGKMTDIT-IE 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLNIPIKMDGFQ 238 K KI + A N ++ + + + + Sbjct: 184 EFNKGKIARIQTAKEGYWENGSWRIVDGNVFALDDKDGVQSSAKFKEQIIPLNFSPKQIS 243 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ + E+ + +S + R + + I IPL +I A + + Sbjct: 244 WEQKEPEEMTIRELREYISMLEEQ-HTSAARQWCEIFMRINIPLASFFFAMIGACLGTQK 302 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R++ I + I F+ Y I+T GK G + P+ A +P IL + + + ++ +K Sbjct: 303 QRTSS-SIGLGISIIVIFIYYAIMTFTTGLGKGGAMPPLLACALPNILCLGVGVYLMKKK 361 >gi|320530395|ref|ZP_08031454.1| hypothetical protein HMPREF9555_01558 [Selenomonas artemidis F0399] gi|320137359|gb|EFW29282.1| hypothetical protein HMPREF9555_01558 [Selenomonas artemidis F0399] Length = 369 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 134/359 (37%), Gaps = 7/359 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y F+ + L+ + + Q S+ + +P ++ Sbjct: 10 ILDKYIFREVFVSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGVV 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ +++ F L+ SE+ ++ GI+ ++ P V+ ++ + +L + Sbjct: 70 MWTFPMSMLLASLLTFGKLSSASEITAMKSCGINFTRIAAPAVLLGFVVSVGAILFNEYV 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSI 182 ++I + KS ++ Q + A+ E + + Sbjct: 130 VPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEITDGQIRRLVYARAYDAEQQRLTNVSLQ 189 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLNIPIKMDGFQ 238 K+ H ++A+ A + + Y ++ + L + Sbjct: 190 VFGDDGKVSHVENAEYAEWTGKEWIMHSGDVYDIADEHMERHMRFETQVLPVQKDPRQII 249 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ ++++ ++ + + E + Y + +P+ + TLI + ++ Sbjct: 250 REQKSPEEMTMRELRRQIA-LMQTQYVNTNKLEAELYQRVSVPMASLIFTLIGVPLGIQP 308 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R++ A + F Y ++T+ +F + G+L P+ A IP I+ I ++ + Sbjct: 309 TRNSSSA-GFAMSVIIIFFYYALMTMGNAFARGGVLPPMLAVWIPNIVGIIAGAILFRR 366 >gi|117619151|ref|YP_858152.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560558|gb|ABK37506.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 356 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 132/362 (36%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M GIL RY + + L L + L +I E +GE NY + +P Sbjct: 1 MFGILDRYIGRVIFMSVLLCELTLVGLAALIKYVEQLKSVGE-GNYDMLSALYYVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 P L+ ++ L +SELV+ +A G S ++ + +I L I L+ Sbjct: 60 KEAVLFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMILVGLMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +++ D+ G S W + N +I + + T Sbjct: 120 EYVAPIAKRMADDIKAGALSEGRLTVSAYGVWARDGNNFVNING-----VRNDGALTGIT 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDG 236 + K+I A + LK+V ++ + + + Sbjct: 175 LYRFTPERKLIDILQAQEGVFEQHHWLLKQVQVTRFDDPRQIMSETQPQMEWSSELTPKQ 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S + ++ + + + +N R + + + ++ PL +VAM L+A+S Sbjct: 235 LGVVSIDPENLPVAGLLDYIGYLD-ANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + GI +GF +Y + + P+ AA+ P +L +S IL Sbjct: 294 GPLRSVSMGARMLMGIMTGFAVYVSDRVFGPISLVYAVPPILAAIAPSLLFGGISFYILS 353 Query: 357 QK 358 +K Sbjct: 354 RK 355 >gi|261364966|ref|ZP_05977849.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] gi|288566764|gb|EFC88324.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] Length = 356 Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 137/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ + A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGK-GSYNGATMAQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL ++ + T + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLVLSQFGLIFALATAALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WIAPVLSQKAENIKSTAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 DK + + + +LK + ++ ++ I +K + Sbjct: 175 ERNDKNELTQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ +S +N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYISHLENNNQ-NTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTIAFALLAVWLIRRQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|326799922|ref|YP_004317741.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] gi|326550686|gb|ADZ79071.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] Length = 358 Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 115/356 (32%), Gaps = 1/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y K YL T ++ + ++ + D++E + + A +P Sbjct: 1 MNIIDKYIIKKYLGTFVFTMAIFTVVAVIFDISERMDDFLKNHAPLSKIVFEYYAGFIPF 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P I + I + +E+V G+S + L P+ + + ++ + T++ Sbjct: 61 YLNFLSPLINFIAVIFFTAKMADQTEIVPILNGGMSFRRFLRPYFIAASIICLVTLIFNI 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I K+ I + D N I + + Sbjct: 121 YIIPRTNKLKIGFENIYVKPIDNNSKSSTHMQIDKNSFVYIDNFDNDRKVGYNFILETFK 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ I R D + I S + + F+ Sbjct: 181 GQELQEKLIADRITWDSVKNNWKIENYTIRIVNGLNEKMIKGTSKDTTLDMSPRDFEIRD 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 F + + E+ + + + + Y + P +TL+ S+S + R Sbjct: 241 NVFMAMTTQELNENIEKEKIRGTGRMTDLKLEKYKRFIYPFSAYILTLMGVSLSSKKVR- 299 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + GI F I F G L P+ AA IP ++ + + + +L + Sbjct: 300 GGIGLSLGVGIALSFTYILFIQFANMFSLKGGLPPLLAAFIPSLIFLGVGLYLLYK 355 >gi|255531333|ref|YP_003091705.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] gi|255344317|gb|ACU03643.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] Length = 367 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 116/357 (32%), Gaps = 3/357 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL Y YL T LY L ++++ + DL+E + ++ A +P Sbjct: 9 KILDWYIISKYLGTFLYTLTLFVVIIIIFDLSEKLDDFLSANLTFWQVISLYYAGSIPYY 68 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + + P I + I + +E+V + G+S + L P+ V + ++ + Sbjct: 69 VNMLSPLINFIAVIFFTAKMADQTEIVPILSGGVSFNRFLLPYFVSAFVIFAVNLASNLY 128 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I ++ + D I N + K D Sbjct: 129 ILPYTNQLKNTFENTYVKKNDPSSKSNIHMKLDDNTYIFMDNFDNKSKTGTKFSLDNFKG 188 Query: 183 TIDKKNKI--IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + K I + D+ ++ V + + + + ++ D F + Sbjct: 189 DVLTKKLIADEIKWDSLKRSWKLTNYSIRYVNGLKETFVSGTSLTKDTVLDMRPDDFSAY 248 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 F + S E+ +K+ + Y + PL +TLI ++S R Sbjct: 249 DNVFENLSNKELSEKIRKERIRGSGIWNDLLFEQYKRYLHPLSAFVLTLIGVALSSRKVR 308 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + GI F K F G + P+ A + P + L +L + Sbjct: 309 -GGVGLPLGIGILLSFAYIVFNQFAKMFSLKGGMPPLLAVIAPTLFFGLLGFYLLRK 364 >gi|121534980|ref|ZP_01666798.1| permease YjgP/YjgQ family protein [Thermosinus carboxydivorans Nor1] gi|121306393|gb|EAX47317.1| permease YjgP/YjgQ family protein [Thermosinus carboxydivorans Nor1] Length = 361 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 136/361 (37%), Gaps = 8/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K L ++ + + + S+ L +P Sbjct: 1 MRILDKYILKEMLGPFIFGIAAFSSVFIGTSTLFRLARYITEYGASVYSVTKLFIYSLPG 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P L+ +++ F L+ +SE+ ++ G+S ++L P + + ++ I V++ Sbjct: 61 IIVLTFPMSMLLASLLAFGRLSASSEITAMKSGGLSFFRLAAPVFIAAFVVSIVAVILNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++++ + + + I + + + + A+K + T Sbjct: 121 AVVPRANNAYQNVLRYEIEKSRPKTQEHIVIKDVKDGEIERLTYARKFDEAANAMYAVTV 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDG 236 K +++ ++A+ AI N + ++ + Y + + + Sbjct: 181 QEF-DKGRLVRVENAEKAIWDNGRWIMESGIIYDVAPEGQLQRTLRFDKQFMPVEKSPRE 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + ++ + E+ + + + E + + + IP + LI + L Sbjct: 240 IAREQKKPEEMTIKELKQHIKVL-QREYVKTSTYEVELHQRLAIPAASLVFALIGTPLGL 298 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + RS+ + I F+ YTI+T+ + G+ G + V AA IP I+ I + ++ Sbjct: 299 QPHRSSSSIGLGIS-IIIIFIYYTIMTVFTALGQGGAIPAVLAAWIPNIVFIIIGAFLIR 357 Query: 357 Q 357 + Sbjct: 358 K 358 >gi|237807324|ref|YP_002891764.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] gi|237499585|gb|ACQ92178.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 128/362 (35%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M GIL RY + + L + + L +I + +GE + +P Sbjct: 1 MFGILDRYVGRTVIMAILMCTVMLVGLSSLIKFVDQLQNVGEGSFTTFHAILR-VLYAIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 P L+ ++ L +SELV+ +A G+S +++ + I + +L+ Sbjct: 60 GDTVLFFPMAALLGGVIGLGQLASSSELVVLQAAGLSRAKIVISALKTVIPVMFLIMLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E+ D+ G S W++ + I + T Sbjct: 120 EYVAPIAEQKAHDIKTSAISGGKITASTYGIWVKEGHDFISIDTLF-----RDGSLRGVT 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDG 236 + ++ + +A+ LK +V Q K + D Sbjct: 175 LYRFNLNGELQEVIRSAMAVYQQQAWHLKDIVITQLQDKQQIKFKNLTDWVWKTNLTPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S + +S+ + E +F+ ++ P+ ++AM L+AAS Sbjct: 235 LGVVSVSPDELSAQGLYNYISYMKSNGQQ-VDDYELEFWRKLLAPVSVIAMLLLAASTIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + G+ GF + ++ F + PV A +P ++ + ++I +L Sbjct: 294 GPLRSVSMGARLISGVMMGFAFFVANQVLGPFSLVYNVPPVIGASVPSLIFMGVAIYMLQ 353 Query: 357 QK 358 ++ Sbjct: 354 RR 355 >gi|145300688|ref|YP_001143529.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853460|gb|ABO91781.1| predicted permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 133/362 (36%), Gaps = 11/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M GIL RY + + L L + L +I E +GE NY + +P Sbjct: 1 MFGILDRYIGRVIFMSILLCELTLVGLAALIKYVEQLKSVGE-GNYDMINALYYVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 Q P L+ ++ L +SELV+ +A G S ++ + +I L I L+ Sbjct: 60 KEAVQFFPLAALLGGLIGLGQLATSSELVVMQAAGRSKISIVMAALKTAIPLMILVGLMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +++ D+ G S W + N +I + + T Sbjct: 120 EYVAPIAKRMADDVKAGALSEGRLTVSAYGVWARDGNNFVNING-----VRNDGALTGIT 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDG 236 + K+I A + LK+V ++ + + + Sbjct: 175 LYRFTPERKLIDILQAREGVFEQHHWLLKQVQITRFDDPAQILSETQAQMEWSSELTPKQ 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S + ++ + + + +N R + + + ++ PL +VAM L+A+S Sbjct: 235 LGVVSIDPENLPVAGLLDYIGYLD-ANKQDAGRYKLEMWRKLLSPLSVVAMILLASSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + GI +GF +Y + + P+ AA+ P +L +S IL Sbjct: 294 GPLRSVSMGARMLMGIMTGFAVYVSDRVFGPISLVYAVPPILAAIAPSLLFGGISFYILS 353 Query: 357 QK 358 +K Sbjct: 354 RK 355 >gi|71277954|ref|YP_267493.1| putative permease [Colwellia psychrerythraea 34H] gi|71143694|gb|AAZ24167.1| putative permease [Colwellia psychrerythraea 34H] Length = 355 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 132/357 (36%), Gaps = 10/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y + TT L + + +I E +G NY ++ A+ VP Sbjct: 1 MRIIDFYIGRVIASTTFITLAVFVSVSGIIKFVEQMRAIG-RGNYDLAHAALYVLYAVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ L SEL++ +A G+S ++ + ++LL I ++ + Sbjct: 60 DVEVFFPMSALIGGLIGIGMLASNSELIVMQAAGLSRLDIIKSVMKTAVLLIIVSMAIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A SGE ++ Q G + W + + +I + + Sbjct: 120 WLAPSGEAKAREIRAQAISGGSLIAAKNGVWAKDGDYFVNIGEVLDR-----GQLKKVQI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 + + KI A AI + L V E+ I S N + Sbjct: 175 YGFNDELKIDSWLSAKSAIYQDKSWLLTDVEEFSLTENEIITKSHSQKIWNSSLTPKKLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S S +I + + +N R + F+ I+ PL + M L+A S Sbjct: 235 VVTVTPESLSLRGLIDYLDYLE-ANEQDPSRYKLAFWRKIMQPLTVAVMLLVALSFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 RS + G+F+G + + ++ S L P+ A+IP + + ++ + Sbjct: 294 LRSVSMGARIMMGVFTGILFFISNEVLGSLSLVYQLPPILGAMIPSLFFVGIAWYFI 350 >gi|238927586|ref|ZP_04659346.1| permease YjgP/YjgQ family protein [Selenomonas flueggei ATCC 43531] gi|238884511|gb|EEQ48149.1| permease YjgP/YjgQ family protein [Selenomonas flueggei ATCC 43531] Length = 379 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 132/359 (36%), Gaps = 7/359 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y F+ + L+ + + Q S+ + +P ++ Sbjct: 20 ILDKYIFREVFLSFLFAICAFSAVFIGSGTLFRIAQYITDYGASLPSVIKIFVFSLPGVV 79 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ +++ F L+ +SE+ ++ GI ++ P ++ ++ + VL + Sbjct: 80 MWTFPMSMLLASLLTFGRLSSSSEITAMKSCGIGFGRIAAPAILLGFVVSVGAVLFNEHV 139 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSI 182 ++I + KS ++ Q + A+ E + Sbjct: 140 VPRANTAYRNVIYYEIEGNSGMKSQEHVIIKEIEGGQIKRLVYARSYDAEQQHLTGVSLQ 199 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGFQ 238 K+ H ++A+ A + + + Y + + L + Sbjct: 200 IFGADGKVSHVENAEYAEWTGSEWIMHQGDVYDIADEHLERRMHFETQVLPVEKNPRQII 259 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ ++ ++ + + E + Y + +P+ + TLI + L+ Sbjct: 260 REQKAPEEMTMRELRHQI-TLMQTQYVNTNKLEAELYQRVSVPMASLIFTLIGVPLGLQP 318 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R++ A + F+ Y ++T+ + + G+L P+ A IP I+ I ++L + Sbjct: 319 TRNSSSA-GFAMSVIIIFIYYALMTMGNALARGGVLPPMFAVWIPNIVGIFAGGILLRR 376 >gi|268317250|ref|YP_003290969.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] gi|262334784|gb|ACY48581.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] Length = 361 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 122/358 (34%), Gaps = 4/358 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ + L L+F ++ V+ E + + V + +P I+ Sbjct: 3 LIDRHIVRRLLLGYLFFTGALIVFFIVLHYVEYIDDFMDRGASMREVFLVYYPSYIPEIV 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + + V + + E+V + G+S+++LL P V ++++ F + Sbjct: 63 RLTSPLALFLACLYVTGRMAQGLEIVALQMSGVSLYRLLRPCVALALIVTGFMFWFNGWV 122 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ +Q Q Q + + Sbjct: 123 VPVTNRTVVAFDEKYLSKTPRQFDLSHLHRQARPGQFLSVGYYDRERRIAYRIALQQFAE 182 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + V + + + + L++P+ + Sbjct: 183 GRRLAYRLDAPRMEWNDSLQAWVVPEGIARHFEPDGREVRRPVRRQQLDLPLYPRDLART 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + + ++ +S H R +Y P + + LI ++ R Sbjct: 243 EREVEAMTLPDAAAHLAALRRSGAGHLGRPLVAYYSKFAYPFANLILVLIGVPLA-SVRR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + G+ F + +++ FG + L P+ A +P ++ ++ +++++ + Sbjct: 302 RGGQAVQIGIGLGVAFAYLALQKLIEPFGYTETLPPLLVAWLPHLVFLAGALVLVART 359 >gi|134095576|ref|YP_001100651.1| hypothetical protein HEAR2399 [Herminiimonas arsenicoxydans] gi|133739479|emb|CAL62530.1| putative permease [Herminiimonas arsenicoxydans] Length = 382 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 117/382 (30%), Gaps = 26/382 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +YF ++ ++ L+ + L DL +G Y I + +P Sbjct: 1 MKILQKYFAAEIGRSVIFVLIAFLALFGFFDLIAELKAVGH-GGYKIQHALLFVLLSMPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I SE I RA +S + ++ I T +V Sbjct: 60 YLYELMPIAALIGTIWTLSQFAARSEFTIMRASSMSTGMAGLMLIKIGLVFAIVTFVVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD-------IFIGAKKILPENH 174 + + + + + Q+ W + + + + Sbjct: 120 FVVPASSNMAEKIRTLNQGGSLSQEFRSGLWTKDMIRSNGKDGEAIGSRFLNVRTVQPDG 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK-----------------VVEYQYG 217 D ++ + A A D V L + Sbjct: 180 QLTDLKIYEFNRNFHLTALITAARADYQGDNVWLLSNGSQAEFGETELMGAAVATDITTA 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + S L + + A S Y+++ + ++N R E + Sbjct: 240 ISTRNFASKPLISEVTPEILSVGFSDPAKMSAYDLVNYTQYLAENNR-ETARYEIALWKK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 +V P + M +A + RS + + GI G I ++ G P Sbjct: 299 VVYPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPF 358 Query: 338 AAALIPVILTISLSILILLQKE 359 A A++P +L + +I LL E Sbjct: 359 ATAILPSLLFLLAAIGALLWVE 380 >gi|319941841|ref|ZP_08016163.1| hypothetical protein HMPREF9464_01382 [Sutterella wadsworthensis 3_1_45B] gi|319804774|gb|EFW01641.1| hypothetical protein HMPREF9464_01382 [Sutterella wadsworthensis 3_1_45B] Length = 377 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 128/378 (33%), Gaps = 23/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ R F K L +T++ L+ + L DL + +G +Y+I R + + +P Sbjct: 1 MSVISRQFAKDILLSTIFVLIVLIALFAFFDLIGQLDDLG--ADYTIGRAFLTTSLTLPS 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ ++ TSE + RA G S W+L ++ ++ + T + Sbjct: 59 RAYEVMPLAVLLASVYTMSKWASTSEFTVLRASGCSPWRLARSLLIPGVICVLATYGLGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF-- 179 +A + ++ ++ + + W++ + + I N D Sbjct: 119 IVAPAAQRFAQEVRSGTNASLSIRGFASGAWVRDVINSPEDGRVERYINVRNLSASDRQL 178 Query: 180 -----TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--------- 225 +++ A+ +L V Y + K++ Sbjct: 179 TGAWRMFEFNRDDGRLLRLVRAESGRWTGTGWELTNAVIIHYPAVTATKDAPQQGSVTTE 238 Query: 226 ----TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP 281 L + D + + S E+ + + ++ + F+ P Sbjct: 239 HVDALKLTSTVNPDILSVMTTKPDRMSMDELNRFIEHLDQV-HQDTEHYVSVFWSKAFYP 297 Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + + M +A + +RS + + G+ G Y + I + P A Sbjct: 298 FICLVMLAVAMPFAYMNARSGGMAVKIFCGVLVGIAFYALNNIFLYLSVLSSMPPALMAA 357 Query: 342 IPVILTISLSILILLQKE 359 +P IL + L L E Sbjct: 358 LPSILMCFAAALSLWWLE 375 >gi|291532164|emb|CBL05277.1| Predicted permeases [Megamonas hypermegale ART12/1] Length = 361 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 141/360 (39%), Gaps = 6/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K + T ++ + + Q S S L +P Sbjct: 1 MRILDKYILKETIMTFIFGICAFSAVFLGSGTLLRIAQYITQYGASFSAIVRLIIYSLPG 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P L+ ++ F L+ SE++ +A G+S +L+ P + S+ + IF++ Sbjct: 61 IIVWTFPMSMLLAALLTFGRLSGNSEIIAMKACGVSFKRLVTPVIAFSLGVSIFSIGFNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + DL++ +S ++ + + D S Sbjct: 121 YVVPASNQAYADLVRYEIQGNTSPESQEHIIIKQIQDGNIQRLVYARKYDAETGNLDNLS 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNIPIKMDGF 237 I ++ K++ ++A+ A D+ + V Y + + +S L I Sbjct: 181 IQEFEQGKMVRVENAEYAKWSVDEWVMYNGVLYDLSQPNTERMMKFDSQVLPINQTPKQI 240 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 K ++ + E+ ++++ S + E + Y +P+ + LI A + ++ Sbjct: 241 IKSQKKPDEMTIKELREQINIMK-SQYVDTKKLEIELYQRFTVPMASLMFALIGAPLGIQ 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +RS+ I F+ YT++T+ + G++ + PV A IP I+T+ I ++ + Sbjct: 300 PNRSSSSIGFGIS-IIIIFIYYTLMTLAGAIGQNSFIPPVIAVWIPNIVTLIAGIYLIRK 358 >gi|332292438|ref|YP_004431047.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] gi|332170524|gb|AEE19779.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] Length = 358 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K Y+ T + L+ + + +++L E +++ A+ Sbjct: 1 MKILDWYIVKRYIGTFVTMLVLFIPIGIIVNLAEKIDKIL-ANEAPFGEVALYYLNFTIY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + G+S ++ L P+++G+ ++ + + Sbjct: 60 FANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFYRFLRPYLIGATIVCVGAFFLGT 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFT 180 +A K + I ++ K + + QI + + + + Sbjct: 120 YLAPRANKGYNEFIFEYLKKNKKDRETQNVYRQIDTGDYIYVSSFTPRTKTGRNFTWEHF 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + KK + G I K MD Sbjct: 180 EGNKMTYKMSAIRIRYNEEDTTYTLNSFKKRTITENGDILESKAKLDTVFNFDMDDLTPV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S E+ K ++ + R E +P+ +T+IA +VS R Sbjct: 240 EYIAETLSTPELRKFIAKEKSRGSSYISRYEVTLQKRYSLPVAAYILTIIAVAVSA-MKR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I +A+GI F+ + + + P+ A P IL L++ +L Sbjct: 299 RGGMGINLAFGIVLAFVFIFFDKVFGTLAEQSDFPPLVAVWTPNILFAILAVYLL 353 >gi|312142810|ref|YP_003994256.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] gi|311903461|gb|ADQ13902.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] Length = 366 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 119/364 (32%), Gaps = 8/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +Y +K + L+ + + DL + + L +P Sbjct: 1 MKTVDKYIYKELIAPFLFGVAAFTGIFIGTDLIFEVTEYYIEWGVDVLTLLRLFFLSLPE 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P L+ I+ + L+ SE+ RA GISI ++ P ++ ++ T+ + Sbjct: 61 IIILTFPMAALLGTIMAYNRLSGDSEITAMRAGGISIMAIVLPALIMGLVTSGITIAITE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ--ISNPQQDIFIGAKKILPENHIWEDF 179 I +I Q+K + + ++ S + ++ K + Sbjct: 121 FIVPGANYQAEQIIHQFKHGERRPDTQYDLFLTPLDSRTSRPDYMLYAKSFNAENGRMTD 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKM 234 + + + +A+ A+ D Y R + Sbjct: 181 VVLQSFEDGRPRSVLEAEEALWLRDGWSFFNGTVYFLDREDRSPSLEFSQYRSREDIHSP 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 K + + E+ + ++ + +F+ +P+ L+AA + Sbjct: 241 AQAGKLGKDIDEMNIRELNEHIALLEQQGRAAYEE-RVEFHHRFSVPMASFIFALLAAPL 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ RS I F+ Y ++TI + G G + P A + I+ + + Sbjct: 300 GIKPQRSAGSATGFGISIIIIFIYYVLMTIGDALGSQGTIEPWLGAWLQNIIIFLVGSGL 359 Query: 355 LLQK 358 L + Sbjct: 360 LYKT 363 >gi|292493020|ref|YP_003528459.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] gi|291581615|gb|ADE16072.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] Length = 354 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 125/360 (34%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + TL LL + L ++ ++GE NY + A +P Sbjct: 1 MKILDRYVAKAVISNTLLVLLVLIALYTFVEFITELEEVGE-GNYGVMDALRYTAYSIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++P L+ +++ +L SELV RA G S+ ++ + ++ + T+L+ Sbjct: 60 YIYDLLPVAALLGSVLGLGSLAGQSELVAMRAAGFSVGRITRSALATGMIFVVVTILMGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ L K ++++ W + + + N ++D Sbjct: 120 VLAPPAKQAANTLRSLAKTGHLSEQAERGFW-----TRNNNNFNRIGRVLPNGQYQDIEI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 D+++++ A A + D L + + I + + Sbjct: 175 FEFDEQHRLRVISRAAGATYHRDGWHLSDITQRIISSQGITTRRLPEALWESSLSPEMLD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + + + + N + + F+ + P + M +A Sbjct: 235 VVMVDPQQLSAWGLYRYIDYLEE-NKQATEQYQQAFWSKVFAPFNTLIMMFLAIPFIFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + G G + + G AA P +L L +++L + Sbjct: 294 LRSVSMGQRILVGALVGIGFFLFNRLFNQLGLVFEFSSWLAAAFPSLLFFGLGMVMLRRI 353 >gi|148265755|ref|YP_001232461.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] gi|146399255|gb|ABQ27888.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] Length = 359 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 63/362 (17%), Positives = 128/362 (35%), Gaps = 8/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY Y K L + + V+D E + N A+ TRVP Sbjct: 1 MKIFSRYIATAYAKMLGLCLGAFIAIYLVVDFLEKIGRFA-RANAEWKFIALFFLTRVPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II Q L+ ++ L+ SEL R G+S+ ++ P + + + T+ V Sbjct: 60 IICQTASMAVLMATLLTLGMLSLNSELTAMRGCGLSLARITAPIFAIAFAVSLSTLFVSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G + + D I + ++ + A+ P + T Sbjct: 120 FVMPRCNTQGQYIREVLIDKKSPSTF--FRQQNIWHKDENYILKARLFDPATGNLKGITL 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ----YGRIPIDKNSTTLNIPIKMDGF 237 + + R +A + + + VV + + + + +K Sbjct: 178 WKTGTEMEPQQRIEATQGELRGNDWLFRDVVIREMAGGNIISTKSFPALLVKLNLKAADL 237 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + E+I + + R Q + I + V M I ++ Sbjct: 238 KVVGKFSDNMGIRELISY-CDKLRKGGYDPTRFLAQMHSRISLSFAPVIMAFIGIPFAMR 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + + + GF + I +++ SFG++G+L P+ +A ++ I + I ++ Sbjct: 297 GGRSSGIALGIGTSLGIGFAYFIINSVILSFGQAGVLPPLVSAWATNLIFIMIGIWFGMK 356 Query: 358 KE 359 E Sbjct: 357 VE 358 >gi|253991456|ref|YP_003042812.1| hypothetical protein PAU_03983 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782906|emb|CAQ86071.1| similar to putative membrane protein yjgq of escherichia coli [Photorhabdus asymbiotica] Length = 358 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 141/362 (38%), Gaps = 9/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L+T L L + L +I + ++G+ Y+ + A VP Sbjct: 1 MFGVLDRYIGRTILQTILMTLFMLVSLSGIIKFVDQLRKVGQ-GEYTTISAGLYALLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IQ P L+ ++ L SELV+ +A G + Q+ + +I L I T+++ Sbjct: 60 KDIQIFFPMAALLGALLGLGALATRSELVVMQASGFTRMQVAGSVMKTAIPLVILTMIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + I + Sbjct: 120 EWVAPQGEQMARNYRAQKMFGGSLVSTTKGMWAKDGADFIYIQRVMSDTEI---KGVNIY 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDG 236 DKK + D+ + ND KL +V E S ++ K + Sbjct: 177 HFNDDKKLLSVKYADSAVYDENNDLWKLSQVEESDLTDSKKITGSQRISADWKTRLTPEQ 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + + +S+ +S R + + I PL + M L+A S Sbjct: 237 LGVVALDPEALSISGLYQYISYLKQSEQESG-RYQLNMWKKIFAPLSVAVMMLMALSFIF 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R+ + + GI GF+ Y + I + V AAL+P +L ++LSI +LL Sbjct: 296 GPLRTVPMGVRIITGITLGFLFYLLNEIFGPLSLVYSMPAVLAALLPSLLFLTLSIYLLL 355 Query: 357 QK 358 ++ Sbjct: 356 KR 357 >gi|119511693|ref|ZP_01630798.1| hypothetical protein N9414_06074 [Nodularia spumigena CCY9414] gi|119463678|gb|EAW44610.1| hypothetical protein N9414_06074 [Nodularia spumigena CCY9414] Length = 371 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 112/354 (31%), Gaps = 16/354 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RYF K + L+ + L ID + IS + + P I Sbjct: 2 DRYFTKELVAPFLFGVGAFSSLGVTIDAVFELVRKIVESGLPISIAIQVFLLKFPNFIVL 61 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 P TL+ ++ + L+ SEL+ R G+S+++++ V+ S+++ T + IA Sbjct: 62 AFPMSTLLATLMTYSRLSGESELIAMRGCGVSVYRMVLTAVMLSLVVTGITFIFNEQIAP 121 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + +++ + + + +IL + F + Sbjct: 122 AANYQATVTLEKALKSDRPTFQQSNIFYPEYRDVEQPDGSRNRILARLFYADQFDGKQMK 181 Query: 186 KKNKIIH---------RKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLNIP 231 I ++ ++ Y R + L +P Sbjct: 182 GLTIIDRTTEGLNQIVVSESAQWNASDNVWDFYNGTVYLVAPDSSYRNILRFEHQQLQLP 241 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLI 290 + + E ++++ R + + +P + V L+ Sbjct: 242 RTPLNLVERRRDSGEMNIRESLEQLEIQRIGGDRKEIRKLQVRIQQKFSLPFVCVVFGLV 301 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 +++ RS + + F Y I I + G++G+L P A +P Sbjct: 302 GSAMGSRPQRSGR-GTSFGVSVIVIFTYYLIFFISGAMGQAGVLSPFMGAWLPN 354 >gi|148261610|ref|YP_001235737.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|326405100|ref|YP_004285182.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] gi|146403291|gb|ABQ31818.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|325051962|dbj|BAJ82300.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] Length = 376 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 147/368 (39%), Gaps = 9/368 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P L Y + +L + G + + D ++ Q + P + R L RVP Sbjct: 10 PLTLSLYIGRRFLGAVVAMQAGLTAIGALFDFLDLLRQSADKPQATFWRMLALEVLRVPW 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + QI+PF L+ I F+ L R+SELV++RA G S+WQ L V G+ L+G+ + Sbjct: 70 LGMQILPFAVLLGGIFAFWRLTRSSELVVARATGTSVWQFLAVPVAGAALIGVLATTAGS 129 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ--------DIFIGAKKILPEN 173 PI+ L + S + + + A + + Sbjct: 130 PISAIMFARAEVLYSTYLGVDSGPLSLQGGQLWLRQADDAGGKGGIAILHADAVHLHGKV 189 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 T + + + + R +A + +L+ P ++ + + Sbjct: 190 LTTGHITVLRLTAQTTLQERIEAARGQLEPGGWRLESARILTPDGEPRAVSALRIPTTLT 249 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + Q+ ++ SF+ + + +S F + E F L+ +PL+ M L+AA Sbjct: 250 VGRVQESFASPSALSFWALPGFIRLLRRSG-FSATQHELAFQSLLALPLLCATMVLVAAG 308 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 S+ SR ++ G+ GF+L+ + + GKSG L AA P + L++ Sbjct: 309 FSMRPSRRGGAIQMIGAGVGCGFLLFMLSEVAAQLGKSGALPVGLAAWAPAAAGLMLALA 368 Query: 354 ILLQKEDG 361 +LL EDG Sbjct: 369 LLLHLEDG 376 >gi|124267133|ref|YP_001021137.1| hypothetical protein Mpe_A1944 [Methylibium petroleiphilum PM1] gi|124259908|gb|ABM94902.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 373 Score = 134 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 124/368 (33%), Gaps = 16/368 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + R + L + + + L F ID E + +G Y + A+ +P Sbjct: 1 MRTVRRLLYADVLGAVTFVAVSFLSLFFFIDFVEELDDIG-RGAYRVHHAALYCLLELPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I L ++SE I R G+ + L+ + + T +V + Sbjct: 60 RLYELLPIAVLIGTIYAMARLAQSSEFTILRTGGLGPGRALSLLAKIGLAFAVLTFVVGD 119 Query: 122 PIATSGEKIGIDLIQQWK-------DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + + L + +N K + I + + Sbjct: 120 YVGPYFDAKAQTLRSTLRGSASGGGNNSAWLKDRRAAAPGELPAGERIDSINIGNVGPDG 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-------RIPIDKNSTT 227 + +D ++ +++ R A+ A++ + +LKKV ++ + ++ Sbjct: 180 LLDDVRIYEFSEEGQLLARVAAEHAVVEDGAWRLKKVRLTRWHAASGDGLPVDERRDELR 239 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM 287 + S S ++ + MS N R E QF+ + PL + M Sbjct: 240 WPTRLTPSVVGAAVSPLKSMSTVDLYRYMSHL-SQNEQAAQRQEIQFWKKALYPLACLVM 298 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 +A + +R+ + V GI G + + G P AA P Sbjct: 299 VGLALPFAYLHARAGGVSVKVFGGILLGISFVLLNNVSTHLGLLRDWTPWIAAAAPGAFY 358 Query: 348 ISLSILIL 355 + LS+ Sbjct: 359 LLLSMAAF 366 >gi|255066290|ref|ZP_05318145.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] gi|255049500|gb|EET44964.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] Length = 356 Score = 134 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 138/361 (38%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ + A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGK-GSYNGATMAQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL ++ I T + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGLIFAIATAALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WIAPVLSQKAENIKSAAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + DK + + + +LK + ++ ++ I +K + Sbjct: 175 VRNDKNELRQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ +S +N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYISHLENNNQ-NTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTIAFALLAVWLIRRQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|325919211|ref|ZP_08181260.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325550311|gb|EGD21116.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 368 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 121/365 (33%), Gaps = 9/365 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP + Y + L T L + L V +G+ +Y+ A VP Sbjct: 4 MPRVHDWYVGRAVLFTVLLTWAVLLGLDLVNAFASEAKNIGQ-GSYTFGHAFAYVAYTVP 62 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P ++ ++ L TSEL RA+G+S ++ V LL V+ Sbjct: 63 RRAYTLFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTAGMVISG 122 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---W 176 + + L + N D + W + + + G +K+L Sbjct: 123 ETVGPWAQNQADTLKTSARYNSDMAMARYSGLWAREGDTFLNALSGEEKLLDGGGTALDL 182 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIK 233 D +D ++ A LA N L++V + + + + + Sbjct: 183 HDVRLYHLDASGRLQQLTYAALAENRNGAWTLRQVRRDTFQERSVQRETFPELPWQSQLS 242 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + S ++ + + + ++ E Q++ PL ++A+ L A Sbjct: 243 PAALAAGLAKPRNLSARDLEQSIEYRRRNG-LDARDYEDQYWSRWFYPLNVLALCLAAIP 301 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 S RS + GI + + + L A +P ++ + +S Sbjct: 302 FSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAW 361 Query: 354 ILLQK 358 + ++ Sbjct: 362 LFRRR 366 >gi|257468008|ref|ZP_05632104.1| hypothetical protein FulcA4_01652 [Fusobacterium ulcerans ATCC 49185] gi|317062294|ref|ZP_07926779.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687970|gb|EFS24805.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 362 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 119/361 (32%), Gaps = 7/361 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I+ +Y K ++K+ L+ + + V L ++ + + +S + T +P I Sbjct: 4 KIIDKYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSD-GRFSANESITYILTMIPKI 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + + P L+ +++ ++ E++ + GIS +++ + S ++ + + + Sbjct: 63 LIDVAPLAVLLGSLMTVSSMASNLEIISLKTAGISFKRIVLFPICISAVIAVMVFYINDS 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + ++ + + +++ N +G + + Sbjct: 123 LYPYSVRKNREIKDGERAKREMPVEKKNAFLRGENSNYVYLMGKINRETGFGENIEIVDL 182 Query: 183 TIDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL---NIPIKMDGFQ 238 + LK Y ++ K + + F Sbjct: 183 NEEFNKVERIITAKEGRYNFSKKVWVLKDANIYDGEKLEKPKEVKIFTENKYDDEPEKFI 242 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + E+ K + + P ++ + S+ + Sbjct: 243 TKSVEPKTLTIKELKKSVREIKSIGG-DTRELLVEIGNRYSFPFSSFIISFLGLSLGSRY 301 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R I +A + G+ Y + ++ +G L P + IP I+ + + I + + Sbjct: 302 VR-GASAISMALSVALGYGYYIVQASFEALSINGFLNPFISGWIPNIIFLGIGIYFMYRA 360 Query: 359 E 359 E Sbjct: 361 E 361 >gi|237745417|ref|ZP_04575897.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] gi|229376768|gb|EEO26859.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] Length = 382 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 114/382 (29%), Gaps = 26/382 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RYFF +K+ ++ L+ + L DL + +G Y + V P Sbjct: 1 MKILQRYFFSQIVKSVVFILVAFLGLFAFFDLISELSSVG-RGGYQLHHVFVYILLGFPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +++PF L+ I SE I R +S ++ +FT LV Sbjct: 60 YIYELMPFAVLIGTIYAMALFASNSEFTIMRVSSLSTRDACWMLAKVGLVFLVFTFLVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI-------FIGAKKILPENH 174 + ++ + K W + + + K + + Sbjct: 120 VLTPYTSRMASEFRNNLIGRNLSDKFRTGMWSKDTIRENGREGEIIGSRFMNIKTMRPDG 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---------------- 218 E +++ +++ A + V + Sbjct: 180 TIEQIKLYEFNRELELVKTVTAQNGHYLGNHEWQLNGVVESLIKSSGKSKGKRFPDSAPV 239 Query: 219 -IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 ++S L + D S S YE+ N + F+ Sbjct: 240 VDTEKRDSIRLVSDVTPDILSVISVDANKMSAYELAVYNRHL-VENKQDATSYQIAFWKK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 I+ P + M +A + RS + + GI G I + G P Sbjct: 299 IIYPFSVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVAFILINNLFSHVGLLNTWPPF 358 Query: 338 AAALIPVILTISLSILILLQKE 359 A+IP +L + ++ L E Sbjct: 359 LTAVIPSVLFLLSAVFALWWVE 380 >gi|322435367|ref|YP_004217579.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] gi|321163094|gb|ADW68799.1| permease YjgP/YjgQ family protein [Acidobacterium sp. MP5ACTX9] Length = 813 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 54/393 (13%), Positives = 111/393 (28%), Gaps = 39/393 (9%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P IL Y + + T L ++ + E+ + + +P Sbjct: 422 PLILDDYIMREFGATFALVLAAFSMVFLIFTFFELIGDIIRNR-IAFVTVGDYLLNLIPY 480 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ + P LV +V F +L +TSE +A G+S+++++ P +V + ++ Sbjct: 481 ILYNVTPLCVLVAVLVTFGSLAKTSEFTAMKASGVSLYRVVTPVLVLTAVIACSLFAFDE 540 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW----------------------------- 152 + L K + Sbjct: 541 FYLPQANRRQEALRSVIKGKPAQTFLRPDRQWISGQTVLDPISLAQSRSWAPIAPAVVHI 600 Query: 153 --MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK 210 + + F ++ ++ + Sbjct: 601 GDTAKQPARIFYYQFFDPDHDAFANLTVFEFDPATFTLTRRIFAESAKWDSNVNQWIFEN 660 Query: 211 VVEYQYGRIPIDKNSTTL-----NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF 265 + D I + F+K Q SF E+ +S +S F Sbjct: 661 GWSRTFSGEVADTYKPFTLANFPEIHEQPQYFKKEDRQSQQMSFGELSSYISDLRQSG-F 719 Query: 266 HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM 325 + R Q + P + + M ++A +L + A I + + ++ Sbjct: 720 NTMRLSVQLNRKLAYPAITLVMAILAIPFALSSGKRGGVT-GFAIAILLAVVYLGVSSLF 778 Query: 326 KSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ G L P+ AA P +L LL+ Sbjct: 779 EAMGNVNTLPPMLAAWTPDLLFTFAGAYFLLRT 811 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 114/370 (30%), Gaps = 18/370 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L L + ++F L +I + + S+S A L A +P Sbjct: 1 MRLLTRYILREVLSHALLGGVLFTFVLFTSRLGKILE-IVVRNSASLSDVARLIAYFLPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP LV ++ L SE+ RA G+ + + SI + Sbjct: 60 ALIVTIPMAVLVGILLGLSRLAADSEITAMRASGMGALDFVRIVSLVSIGALALGLFNSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAK---KILPENHIWED 178 +A + L K + + + + + + H++ Sbjct: 120 YLAPRSAANLLALENSLKYSQASFEVEPRVFDEDFKNIVLYVQDVRPGSGAALWRHVFVA 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG-- 236 + K + A N + L ++Q ++ + + + Sbjct: 180 DLTEPSAPKITTADQALVTSAGPGNLNLHLTDGAQHQISPTDANQYNISTFQVTDIPMQT 239 Query: 237 -------FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR----AETQFYFLIVIPLMLV 285 + + S E+I++ + + H+ R + + P + Sbjct: 240 GAQEDAHLSRSDTPILALSLPELIQRGNQAAAPGPKHDVRAARLYKIELNKRFSYPFACL 299 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + L+ + L R I F+ Y + ++ + G L PV + Sbjct: 300 VLMLVGVPLGLSSKR-GGKSTGFVLTILLVFVYYFLSSVGVALANQGKLPPVLGVWGANL 358 Query: 346 LTISLSILIL 355 + + L+L Sbjct: 359 IFAAFGALLL 368 >gi|332187143|ref|ZP_08388883.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] gi|332012843|gb|EGI54908.1| hypothetical protein SUS17_2304 [Sphingomonas sp. S17] Length = 366 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 125/358 (34%), Gaps = 3/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + Y K +L T L +I++ +D+ + P ++ + R P II Sbjct: 11 TIAIYMAKMFLLRTFAILFALVIVLQALDILSESGAILATPGNGEAQVWRYVSLRAPQII 70 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+PF L+ I+ FF +N+ SE++ +A G+S Q+L P +V S + + + + I Sbjct: 71 AFILPFSVLLGTILTFFTMNQNSEVIALKAAGLSAHQVLAPLLVASAGVAVLSFAFNDRI 130 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + Q+ S + + + I + + N T Sbjct: 131 VPRATAT-LSAWQKVDYGPIPIDSGDRSNVWVRDGDDLISVDLVQGRGANTQLGGVTLYD 189 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFSE 242 + A D ++ ++ + S + + + S Sbjct: 190 RKGGGSLQAIVRAPRGRRMGDGWQIGPATRFEVASGKLTSIPSMIIGRGVTPEQLTLASV 249 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 SF + + ++ E + + P+ + M L+ A + +RS Sbjct: 250 NADGLSFKGLSNAIDDLREAGRPTKTL-EGSLWHKLSAPMSAILMPLLGAVAAFGIARSG 308 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + G+ GF + + G G P AA P++L + +L + E+ Sbjct: 309 KLFVRAVIGMALGFAFFVADNFSMAMGDLGAYPPFLAAWAPILLFFLIGEAVLFRTEE 366 >gi|70728450|ref|YP_258199.1| hypothetical protein PFL_1068 [Pseudomonas fluorescens Pf-5] gi|68342749|gb|AAY90355.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 353 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 125/360 (34%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY L L + L + + + E Y++ A P Sbjct: 1 MVK-LDRYIGSSVFMAILAVLGIILGLASLFAFIDEMGAVNET--YTVVDVMSYVALTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ +L SEL I RA G+S+ +++ + ++L + VLV Sbjct: 58 RRVYEMLPMAGLIGCLIGLGSLASNSELTIMRAAGVSVGRIVWAVMKPMLVLMLVGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + E + +GD Q S W + + I + N + T Sbjct: 118 EYVAPATETQAQASRALAQGSGDAQSSKHGLWHRQGDEFIHI-----NAVQPNGLLYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D + ++ A A + D +L V + + S ++ + Sbjct: 173 RYHFDDQRHMLSSSFARQARFHEDYWQLTDVTTTYFRDGHTEVISVPGERWDVALSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + +N R F+ ++ PL+ A+ L+A S Sbjct: 233 STVVMAPESLSISGLWGYIHYLADQG-LNNGRYWLAFWVKVLQPLVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF ++ P+ A L+P + + +L + Sbjct: 292 PLRSVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICAVAGVWLLRR 351 >gi|197119770|ref|YP_002140197.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089130|gb|ACH40401.1| membrane protein, YjgQ-related protein [Geobacter bemidjiensis Bem] Length = 360 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 124/357 (34%), Gaps = 7/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + Y+K L + + V+D E ++ S A+ T++P Sbjct: 1 MNILTRYIARAYVKMLSLCLGSFIAIYLVVDFMEKVSRFTRY-GASWKHLALFFITKIPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I P L+ ++ L+ TSEL R+ G+S++++ P +V S+L+ + + + Sbjct: 60 MIIDAAPLAVLMATLLTLGTLSLTSELTAIRSCGVSLFRISLPILVISVLMSLGVLAIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + + + Sbjct: 120 FVLPKTYAQRTYIQEVLIQKKSPSAFFRQQNIWFREEGTVLRASLFEPARNELKGITLWE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNIPIKMDGF 237 + + R +ADLAI+ + V Q+ + + +K Sbjct: 180 LQPGTGEPL-KRTEADLAILGAKGWMFRDAVVRQFRDGEVSSTQKYRELPVELQLKPADL 238 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S S E+ + S + R TQ + I +P M + +L Sbjct: 239 KTLGKFSDSMSLVELSRYCRKLRASG-YDPTRYVTQMHSRISMPFGCAVMAFLGIPFALR 297 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS+ V I GF+ + +++ S G+ G+L PV AA + + Sbjct: 298 GGRSSGIAFGVGLSIGVGFLYVIVNSVIISVGQVGLLPPVVAAWATNFIFFVAGAWL 354 >gi|188993098|ref|YP_001905108.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris str. B100] gi|167734858|emb|CAP53069.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris] Length = 368 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 124/365 (33%), Gaps = 9/365 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP + Y + L T L + L V +G+ +YS A VP Sbjct: 4 MPRVHDWYVGRAVLFTVLLTWAVLLGLDVVNAFASEAKSIGQ-GSYSFGHAIAFVAYTVP 62 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P ++ ++ L TSEL RA+G+S ++ VV LL V+ Sbjct: 63 RRAYTLFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVVAMALLTATMVISG 122 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---W 176 + + L + D + W + + + G +++L Sbjct: 123 ETVGPWAQSQADTLKTSARYQSDMTSARYSGLWAREGDTFLNALSGEEQLLDNGGTALTL 182 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIK 233 D +D K ++ A +A + + L++V + + + + + Sbjct: 183 HDVRLYHLDAKGQMQQLTYAAVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQLN 242 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + S +++ + + + ++ E Q++ PL ++A+ L A Sbjct: 243 PKALAAGLAKPRNLSVHDLGQSIEYRRRNG-LDASDYEDQYWSRWFYPLNVLALCLAAIP 301 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 S RS + GI + + + L A +P ++ + +S Sbjct: 302 FSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAW 361 Query: 354 ILLQK 358 + ++ Sbjct: 362 LFRRR 366 >gi|323436074|ref|ZP_01050240.2| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] gi|321496389|gb|EAQ39255.2| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] Length = 358 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 121/358 (33%), Gaps = 9/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K Y+ T + L+ + + +++L E +++ A+ Sbjct: 1 MKILDWYIVKRYIGTFVTMLVLFIPIGIIVNLAEKIDKIL-ANEVPFGEVALYYLNFTIY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + G+S + L P+++G+ ++ ++ Sbjct: 60 FANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFTRFLRPYLIGATVVCAGAFVMGT 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A K + I ++ + + QI +I A P +FT Sbjct: 120 YLAPRANKGYNEFIFEYLKKKKNDRDTRDVYRQIDAGD---YIYASSFNPRTKRGRNFTW 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVK----LKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + D KK + + G + I + +D Sbjct: 177 EHFEGNKMTYKMSATQIRFNEEDTTYTLYGFKKRIIGEDGDVLIKQAKIDTTFAFDIDDL 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + E+ + ++ + R E +P+ +T+IA +VS Sbjct: 237 TPVEYIAETLNTPELREFIAKEKARGSSYISRYEVTLQKRYSLPVAAYILTIIAVAVSA- 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R I +A+GI F+ + + + P+ A P IL L+ +L Sbjct: 296 MKRRGGMGINLAFGIVLAFVFIFFDKVFGTLAEQSDFPPLVAVWTPNILFAILAAYLL 353 >gi|118580062|ref|YP_901312.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118502772|gb|ABK99254.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 359 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 140/355 (39%), Gaps = 8/355 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY +L+ L + + V+D+ E + + + A A ++P +I Sbjct: 3 IIDRYIAMTWLRLLLLCQGSFLSIYLVLDMMERIPRFLRVQGA-LVDIARFFAWKLPEMI 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q F L+ ++ L R+SE+V R+ GIS+ ++ P ++ + + ++ I Sbjct: 62 GQTAAFSVLMATLLTLGLLTRSSEIVAMRSCGISLPRISLPMLLLGGGVSLLLLVNAELI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + + P + + + Sbjct: 122 VPDSYERMSRIERVDIKKQAGSAVFKRNNIWFRSDNRIMQARL--FDPRSQVLRGVVVWS 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGFQK 239 +D+ + R DA+ A + + L+ V ++ + ++++ +K+D + Sbjct: 180 LDQYTNPLSRLDAESAELRGESWLLRGVELKEFTAGEGVVVRKLPTRSIDLNLKVDDLRV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + SF ++ + + +++ T + PL + M ++ +L S Sbjct: 240 LDKNADNLSFGKLREYADNLR-KGGYEDFKYRTMMHTKFAAPLSALVMVILGIPFALRGS 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS + V + GF + + ++ S+G+SG+L P+ AA L I + + Sbjct: 299 RSGGVAMGVGASVTIGFAYFVVNAVLLSYGRSGVLPPLVAAWGANFLFILGGLWL 353 >gi|116074701|ref|ZP_01471962.1| possible permease [Synechococcus sp. RS9916] gi|116067923|gb|EAU73676.1| possible permease [Synechococcus sp. RS9916] Length = 389 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 38/367 (10%), Positives = 109/367 (29%), Gaps = 15/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ + ++ + ++ + + + + + R+P + Sbjct: 18 LLDRWLISELVGPLIFAIAAFTVVSLSVGVMFELVRKIVESGLPVLIALQVLLLRLPSFL 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SEL R++G++ +++ P + S+++ T + + I Sbjct: 78 VISFPMATLMATLLAYSRLSANSELTALRSVGVTARRMIAPALALSLVMTTLTFVFNDVI 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS----------NPQQDIFIGAKKILPEN 173 + +Q+ + + + + + Sbjct: 138 VPRANRNAEVTLQRALGKAIATEKGDDIVYSRFGRLAGADEGDRTRGLAQLFYAREFRKG 197 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLN 229 + + D K + + Sbjct: 198 TMQGVTLLDFSRVGFTQMLVADEAKWNDKEGKWEFLNGQSVTLTPEGGTITAQFDRYLYP 257 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 + K + + + E ++ + R + +P+ + Sbjct: 258 LSAAPVRIAKLPKDANNMTVLEAVEAEQLLRDAGDRKEARRLRVRIQEKFTLPMACLVFG 317 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI +S+ + + + + Y + S G G L P+ AA +PV++++ Sbjct: 318 LIGSSLGAKPNNRTSRSQGFGISVVLILVYYVLSFSFSSLGVKGTLPPLLAAWMPVLISL 377 Query: 349 SLSILIL 355 + +L Sbjct: 378 AGGWTLL 384 >gi|311103830|ref|YP_003976683.1| hypothetical protein AXYL_00610 [Achromobacter xylosoxidans A8] gi|310758519|gb|ADP13968.1| hypothetical protein AXYL_00610 [Achromobacter xylosoxidans A8] Length = 392 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 120/370 (32%), Gaps = 20/370 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + ++ L+ + L L + + +G+ +S+ + A +P + + Sbjct: 6 RYLAREIYRSCAVVLMALLGLFTFFALVDDLDNVGDK--FSMMALLYMQALAIPTRLYDL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +LL + +I L I L+ + Sbjct: 64 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMKLLRMLWIVTIPLMIGAGLLSEYVTPW 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + ++ + + W + I L + T K Sbjct: 124 AEIKSGEANLLFRGKAGGDRLNSGYWFKEPTADGGTRIINIGELKGDGQVSAVTLYEFKK 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----------------KNSTTLN 229 + A + + LK V E + + ++ Sbjct: 184 DQTLSALSTAPTGLFTQGDLLLKDVTETRLDDEAAEALANARPPKHPPATVVKLPERNID 243 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S ++ + + +N R + + P L+ M Sbjct: 244 TTLSAERLLARVLTPERMSIATLLDYVDYLR-NNQLQYGRQVVALWRKLAYPFTLLVMIT 302 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 IAA + L +R V GI G + + + + G G AL P I + Sbjct: 303 IAAPIGLMQTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLGKWPAWLTALGPNIGAMI 362 Query: 350 LSILILLQKE 359 +++ + E Sbjct: 363 VALGAMGYME 372 >gi|284051460|ref|ZP_06381670.1| permease YjgP/YjgQ [Arthrospira platensis str. Paraca] gi|291568812|dbj|BAI91084.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 392 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 118/370 (31%), Gaps = 17/370 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + + ++ + + + + +S + ++P + Sbjct: 21 VLDRYIIQELIPPFIFGVGLFTSVAVTVGTVFELVRRVAESGLPVSVAFQVFLLKMPDFM 80 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P ++ ++V+ L+ SEL+ R+ GIS+++L+ P ++ S ++ T I Sbjct: 81 VLAFPMSMILTTLMVYGRLSSDSELIAIRSCGISLYRLVIPAIIFSFVVTGMTFAFNEII 140 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ---------------QDIFIGAKK 168 + +Q+ + S + A Sbjct: 141 VPAANFQATMTLQKALNEDALNISSTNIFFPEYERVSVEGTNRRVNVLRRLFYAEEFADG 200 Query: 169 ILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL 228 + I + + + + + + V R + L Sbjct: 201 KMSGVTILDRSRAGITQIISSRTAIWNPQESTWDFYNGTVYIVDPDGSYRNIARFDHKQL 260 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNY-RAETQFYFLIVIPLMLVAM 287 ++ + + + + + S + + + +P + V Sbjct: 261 HLSRVPLDLASQDRDYGEMNIAQTKEYLELMKLSGDQAKILKTKVRIQQKYALPFVCVVF 320 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 L+ +S+ R+N+ + F Y + I + G+ GI+ P AA +P +L Sbjct: 321 GLLGSSLGSRPGRTNR-ATSFGISVMIIFAYYLLSFITGAIGQKGIISPFMAAWLPTMLG 379 Query: 348 ISLSILILLQ 357 + +S +L + Sbjct: 380 LGVSGFLLYR 389 >gi|194334630|ref|YP_002016490.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] gi|194312448|gb|ACF46843.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] Length = 387 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 131/357 (36%), Gaps = 5/357 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 + + Y + + T ++ L + L V+DL E ++ + I ++ + +P Sbjct: 27 LLKRIDTYIARQFGLTCIFASLSFLALFVVLDLIENIDRFIDNS-VDIQHISLYYLSFLP 85 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P L+ ++ V L+ +SEL + G+S+ +++ PF S+++ +F ++ Sbjct: 86 EVFLATTPIAVLLSSLYVTGRLSSSSELSAIFSAGLSLRRIMLPFAFVSLVITVFNIVNA 145 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I ++++ + + + + + IG + Sbjct: 146 GWILPETTAYKNTFMREFLGKNSEHLFPESRIHILESRDRILSIGKLEPNTGQAEKITLE 205 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 + + I + + + + + + + TL + + Sbjct: 206 TFDGSTITQRIDAEKMNYNADLDRWIMTGTRNRTFLPDTTLYRYDPGNDTLKLSLTASSL 265 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 ++ + + + + + + + A + + I +P+ + + LI +S Sbjct: 266 KELHLRPEEMNIVQHYRYIEEKKDAGFSNLQTAIIELHSRIALPITSLIIILIGVPLSTR 325 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS I I GF+ ++ + + G G+ PV A +P I+ + + I++ Sbjct: 326 KKRSG-LAIEAGISILIGFLYISLEKTIHAIGNGGMADPVLTAWLPNIIFLGVGIVL 381 >gi|291514726|emb|CBK63936.1| Predicted permeases [Alistipes shahii WAL 8301] Length = 367 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +L T + + +++V V D E + EL S +P Sbjct: 8 FKILDRYILGKFLSTYFFAIAMIIVIVVVFDYVEKIDDFTELHAPLKSVILDYYLNFIPY 67 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I Q T + I + +E+V + G+S +L+ P+ +G++++ ++ + Sbjct: 68 FINQFSGLFTFIACIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIASLSLTLNL 127 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + QQ+ K D + QI G + + Sbjct: 128 WLIPISQRHIVAFEQQYIKRKQNTKYDRHIYRQIEPGIFAYIRGYNDGARQASFFVLERY 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD--GFQK 239 + + + E+ + L+ I ++ + Sbjct: 188 ESGTMTHSLEASDAKFNPETKRWTAPRYTKREFDSAGTETFEQFRNLDTLINLEATELGE 247 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ + + E+ + E + + PL +TLI S+S Sbjct: 248 INDLIQTMNISELNAFLDQQRAKGSDSINLIEVEKHARYAYPLSTFILTLIGVSLSSRKV 307 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + G F + F KSG L P A +P I+ + +++ + Sbjct: 308 R-GGTGLHIGIGTGLCFSYILFNRFFEEFAKSGTLPPGLAVWLPNIIYLGIAVYL 361 >gi|312959169|ref|ZP_07773688.1| membrane protein [Pseudomonas fluorescens WH6] gi|311286939|gb|EFQ65501.1| membrane protein [Pseudomonas fluorescens WH6] Length = 359 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 119/361 (32%), Gaps = 8/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY L L L + L + + + + + Y++ P Sbjct: 1 MVK-LDRYIGSSVLIAILAVLGIIIGLASLFAMVDEMKSINDT--YTVWNVLNYVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ +L SEL I RA G+SI +++ + +LL + +VL+ Sbjct: 58 RRLYEMMPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLLLMVCSVLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKI----LPENHIW 176 +A E + +GD Q + W + + I + Sbjct: 118 EYVAPPAEATAQANRALAQGSGDAQSAKHGLWHRQGDEFIHINAVQPGGLLIGVTRYRFD 177 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 ++ ++ + + Q I+ S I +K + Sbjct: 178 KERHMLSSSFAKSAQYSNEKWQLTDITTTYFRNVGQGTQASTEVINVPSEEWGISLKPEL 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S + + + +N R F+ ++ P++ A+ L+A S Sbjct: 238 LNTVVMIPESLPISGLWSYIHYLKDQG-LNNGRYWLAFWVKVLQPVVTAALVLMAISFVF 296 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS V G+ GF+ ++ P+ A L+P + +L Sbjct: 297 GPLRSVTLGQRVFTGVLVGFIFQIAQNLLGPLSLVFGFSPLFAVLVPTTICALAGFWLLR 356 Query: 357 Q 357 + Sbjct: 357 R 357 >gi|58580459|ref|YP_199475.1| hypothetical protein XOO0836 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425053|gb|AAW74090.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 396 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 121/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V +G+ +Y+ A VP Sbjct: 37 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQ-GSYTFGHAVAYVAYTVPRRAYT 95 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ I Sbjct: 96 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGP 155 Query: 126 SGEKIGIDLIQQWKDNGDKQKS-DIIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N D S W + + + G +K+L D Sbjct: 156 WAQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTALDLHDVRL 215 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + + L++V + + + + + Sbjct: 216 YHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 275 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + + +++ E Q++ PL ++A+ + A S Sbjct: 276 AGLAKPRNLSAHDLEQSIEYRSRNG-LDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 334 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S + ++ Sbjct: 335 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRR 394 >gi|21230126|ref|NP_636043.1| hypothetical protein XCC0651 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769883|ref|YP_244645.1| hypothetical protein XC_3583 [Xanthomonas campestris pv. campestris str. 8004] gi|21111656|gb|AAM39967.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575215|gb|AAY50625.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 368 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 122/365 (33%), Gaps = 9/365 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP + Y + L T L + L V +G+ +YS A VP Sbjct: 4 MPRVHDWYVGRAVLFTVLLTWAVLLGLDVVNAFASEAKSIGQ-GSYSFGHAIAFVAYTVP 62 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P ++ ++ L TSEL RA+G+S ++ VV LL V+ Sbjct: 63 RRAYTLFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVVAMALLTATMVISG 122 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---W 176 + + L + D + W + + + G +++L Sbjct: 123 ETVGPWAQSQADTLKTSARYQSDMTSARYSGLWAREGDTFLNALSGEEQLLDNGGTALTL 182 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIK 233 D +D ++ A +A + L++V + + + + + Sbjct: 183 HDVRLYHLDANGQMQQLTYAAVAEHREGRWTLRQVRRDTFQARSVQRETFPELPWQSQLN 242 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + S +++ + + + ++ E Q++ PL ++A+ L A Sbjct: 243 PKALAAGLAKPRNLSVHDLGQSIEYRRRNG-LDASDYEDQYWSRWFYPLNVLALCLAAIP 301 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 S RS + GI + + + L A +P ++ + +S Sbjct: 302 FSFGSLRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAW 361 Query: 354 ILLQK 358 + ++ Sbjct: 362 LFRRR 366 >gi|77457218|ref|YP_346723.1| permease YjgP/YjgQ [Pseudomonas fluorescens Pf0-1] gi|77381221|gb|ABA72734.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 353 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 126/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L + L + + + + Y++ P Sbjct: 1 MVK-LDRYIGSSVFIAIIAVLAIILGLATLFAFIDEMGDVSDT--YTLVDVLSFVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P L+ ++ +L +SEL + RA G+SI +++ + ++L + VL+ Sbjct: 58 RRLYDMLPMAALIGCLIGLGSLASSSELTVMRAAGVSIGRIVWAVMKPMLVLMLAGVLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + E + + +GD Q + W + + I + N T Sbjct: 118 EYVAPATESMAQANRSLAQGSGDAQSAKHGMWHRQGDEFIHI-----NSVQPNGRLYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 DK+ ++ A A D +L V ++ + +T ++ + Sbjct: 173 RYHFDKERHLLSSSFAKRAEFDTDHWQLTDVTTTKFHERSTEVVNTPVERWDVSLSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + + N R F+ ++ PL+ A+ L+A S Sbjct: 233 STVVMAPESLSITGLWGYIHYLADQG-LSNGRYWLAFWVKVLQPLVTAALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ GF + ++ P+ A L+P + + +L + Sbjct: 292 PLRSVTLGQRVFTGVLVGFTFRIVQDLLGPSSLVFGFSPLFAVLVPAGVCALAGVWLLRR 351 >gi|313674434|ref|YP_004052430.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941132|gb|ADR20322.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 357 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 2/353 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L T ++ +L + +V VID E + E N + +P Sbjct: 1 MKILDKYILKKFLSTFVFVVLIILAIVTVIDYTEKNDDFME-HNLGLIDVLPYYGAFIPW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I I P + + V + +E+V A G+S +LL P+++G+ L+ + + + Sbjct: 60 IGNLITPITIFIAAVFVTSKMAGHTEIVAMLASGMSFRRLLVPYMIGAGLVALSSFYLNA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K I + I + + + Sbjct: 120 YVIPDANKTRIAFETAYIKKPFYFTERDIHLKIAPETYAYMESYNNQRDVGYRFTLELIE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K+ R + D A + + I F Sbjct: 180 DKNLKEKLSARRIEWDSAQSNWKVKDWTLRKFDGLTETYSEGKELDTVLNITPKDFGNTY 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ +S + + + Y + P + +T I +S + R Sbjct: 240 GLQETLTLTELNDYISLLKERGADNVKIYLIERYIRFMAPFAAIILTFIGVILSSKKKR- 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +A G F+ + K+ ++ + P+ A +P I + +++ Sbjct: 299 GGTGFQIALGFVIAFIFIIFFILSKAIAENSTMNPILAVWLPNITFSIVGLIL 351 >gi|260466947|ref|ZP_05813129.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029244|gb|EEW30538.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 360 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 114/359 (31%), Positives = 191/359 (53%), Gaps = 3/359 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RYFF Y+ T++F LG + LVF+ID E+ + LP ++ ++ R+P+I+ Sbjct: 4 TLGRYFFFRYVAITIWFFLGLLALVFLIDFTELSGRTTGLPGFTYGTAMAISGLRMPMIM 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q +PF+ L + +LNR ELVI+R+ G+S WQ L P +G++L G+ +V +INP+ Sbjct: 64 LQTVPFVGLFSAMATLVSLNRRYELVIARSAGVSAWQFLLPCCIGALLFGVVSVGIINPL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKS-DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A + + Q + S D PW++ D IGA+ IL + D Sbjct: 124 AAHAFSLSEQIETQLRSGKSNTVSADAAPWIRQKTSSGDTIIGARAILNQGLEMSDAVFF 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +D++ I RKDA A + + +L+ V ++ G I N + +K + Q+ Sbjct: 184 ILDQQGNIAERKDAVRAYLRDGYWELQDVKTFRNGVIQSAAND-RVPTNLKPEFVQERLA 242 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + FY++ K+ + + N QF L+ +P +LVAMTLIAA+VS+ F+R Sbjct: 243 RPETIPFYDLPGKIEVARSFGLKANA-FAMQFDSLVALPFLLVAMTLIAATVSMRFARMG 301 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 Q ++ G+ +GF+LY + ++K+FG +G + AA +PV++ + + LL KEDG Sbjct: 302 QSATMILGGVVAGFLLYVVSVLVKAFGVAGFVPTAVAAWVPVVVAMFFGVTFLLYKEDG 360 >gi|222054622|ref|YP_002536984.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] gi|221563911|gb|ACM19883.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] Length = 357 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 134/362 (37%), Gaps = 10/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I R+ Y + L + + V+D E + + + A+ TR+P Sbjct: 1 MKIFNRFVAAAYARILCLCLGTFIAIFLVVDFLEKIGRFA---GANPAYIALFFLTRIPE 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I Q L+ ++ + +SEL R G+S+ ++ P +V + + I + + Sbjct: 58 VICQTSAMAVLMATLLTLGMFSMSSELTAMRGCGLSLGRIAMPILVIAFSVSILNLAINE 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G + + + M I + + + A P + + T Sbjct: 118 YVLPRCIVQGQYIREVLIEKKSPNLF--FRQMNIWHRDDNFILKANLFDPASGQLKGITV 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD----GF 237 + + R DA A + L VV ++ I K S ++P+ ++ Sbjct: 176 WRMGAGMQPEQRLDAATAKLDAGGWLLTDVVAREFSESNIIKTSEVASMPVPLNLRATDL 235 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + E+ + R Q + I + + M + ++ Sbjct: 236 KVMRKFSDNMGIRELAAYCEKLR-KGGYDPTRYLAQMHGRISLAFAPLVMAFLGVPFAVR 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 SRS+ + ++ + GF + + +I+ SFG++G+L PV +A + + + I L+ Sbjct: 295 GSRSSGIALGISASLGIGFGFFVLNSIVLSFGQAGVLSPVISAWSTNGIFLMIGIWFALK 354 Query: 358 KE 359 E Sbjct: 355 AE 356 >gi|209526011|ref|ZP_03274544.1| permease YjgP/YjgQ family protein [Arthrospira maxima CS-328] gi|209493537|gb|EDZ93859.1| permease YjgP/YjgQ family protein [Arthrospira maxima CS-328] Length = 392 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 47/373 (12%), Positives = 115/373 (30%), Gaps = 17/373 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + + ++ + + + + +S + ++P + Sbjct: 21 VLDRYIIQELIPPFIFGVGLFTSVAVTVGTVFELVRRVAESGLPVSVAFQVFLLKMPDFM 80 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P ++ ++V+ L+ SEL+ R+ GIS+++L+ P ++ S + T I Sbjct: 81 VLAFPMSMILTTLMVYGRLSSDSELIAIRSCGISLYRLVIPAIIFSFFVTGMTFAFNEII 140 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ---------------QDIFIGAKK 168 + +Q+ + + A Sbjct: 141 VPAANFQATITLQKALNEDALNIRSTNIFFPEYERVSVEGTNRRVNVLRRLFYAEEFADG 200 Query: 169 ILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL 228 + I + + + + + + + V R + L Sbjct: 201 KMSGVTILDRSRAGITQIISSRTAIWNPEESTWDFYNGTVYIVDPDGSYRNIARFDHKQL 260 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNY-RAETQFYFLIVIPLMLVAM 287 + + + + + + S + + + +P + V Sbjct: 261 YLSRVPLDLASQDRDYGEMNIAQTKEYLELMKLSGDQAKILKTKVRIQQKYALPFVCVVF 320 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 L+ +S+ R+ + F Y + I + G+ GIL P AA +P +L Sbjct: 321 GLLGSSLGSRPGRT-NRATSFGISVMIIFAYYLLSFITGAMGQKGILSPFMAAWLPTMLG 379 Query: 348 ISLSILILLQKED 360 + +S +L + D Sbjct: 380 LGVSGFLLYRSAD 392 >gi|254410176|ref|ZP_05023956.1| putative permease, YjgP/YjgQ family [Microcoleus chthonoplastes PCC 7420] gi|196183212|gb|EDX78196.1| putative permease, YjgP/YjgQ family [Microcoleus chthonoplastes PCC 7420] Length = 380 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 122/361 (33%), Gaps = 8/361 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY + L+ + + I + + + +P + Sbjct: 18 VMDRYIITELIPPFLFGMGMFSSVGVTIGSLFDLMRRAVDEGLPATLVLKVLLLSLPQFM 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ R+ G+SI++L+ P ++ S+++ T + Sbjct: 78 AYAFPTSVLLATLLTYSRLSSDSELIALRSCGVSIYRLVLPALLLSLVVTGITFGFNEYV 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + + + + + + + T + Sbjct: 138 VPASNYQATITLEKALGEEKPTFKERNIFYREYAEDKTLKRLFYAQNFDGERMKGLTILD 197 Query: 184 IDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLNIPIKMDGF 237 +++ D+ + + Y R + L +P Sbjct: 198 WSQQSLNQIVTADSAIWNVAQSTWDFYNGTIYLVSPDASYRNIVRFEHQQLQLPRIPLDL 257 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + + +++ +S + R + + +P V L+ S+ Sbjct: 258 ARKDRDYDEMNITQARERLELERQSGDEEDIRKLKIRISQKFALPFACVVFGLVGGSLGN 317 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R+++ + F Y ++ I + G S L P+ +A +P ++ ++ +L+ Sbjct: 318 QPQRTSK-ATGFGISVLVIFAYYMLMAIGDALGLSNYLPPLISAWLPNLMGFAVGGFLLI 376 Query: 357 Q 357 + Sbjct: 377 R 377 >gi|289663726|ref|ZP_06485307.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668603|ref|ZP_06489678.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 368 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 120/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V +G+ +Y+ A VP Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKNIGQ-GSYTFGHAVAYVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ I Sbjct: 68 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N D S W + N + G +K+L D Sbjct: 128 WAQNQADTLKASARYNSDMASSRYSGLWAREGNTFLNALSGEEKLLDGGGTALDLHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + + L++V + + + + + Sbjct: 188 YHLDPSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + + ++ E Q++ P+ ++A+ + A S Sbjct: 248 AGLAKPRNLSAHDLEQSIEYRRRNG-LDARDYEDQYWSRWFYPVNVLALCMAAIPFSFGS 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRR 366 >gi|254424599|ref|ZP_05038317.1| putative permease, YjgP/YjgQ family [Synechococcus sp. PCC 7335] gi|196192088|gb|EDX87052.1| putative permease, YjgP/YjgQ family [Synechococcus sp. PCC 7335] Length = 397 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 117/359 (32%), Gaps = 17/359 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K L+ + + I + S + + +P Sbjct: 25 IMDRYIAKELTLPFLFGVGAFSSIAVSIGALFELIRKVADAGLSATLAFEIFLLSLPTFT 84 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + + SEL+ R G+SI +++ P V+ S+L+ + V I Sbjct: 85 VLAFPMSTLLATMMTYSRFSSDSELIAMRGCGVSINRIVAPAVILSLLVTGLSFSVNEII 144 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP----------QQDIFIGAKKILPEN 173 A + + L+ + D+ + Q P + + Sbjct: 145 APASTERAALLLARALDDEKPPFREGNIVFQQQEPAADGSGDELVRFFYARNFDGTTMRD 204 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTL 228 DF+ + K I DA + + Y R I + L Sbjct: 205 ITVVDFSQEDSEDGLKQIVSADAATWDFTRNLWEFTNGTIYAVSPTGSFRQIIRFDKQDL 264 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ-FYFLIVIPLMLVAM 287 +P +++ + E + ++ ++ R IP V Sbjct: 265 QLPRTPLDLANRTKKQEEMNIAETKEYLTILQQTGDEKAVRKLAVAIQRKYAIPFACVVF 324 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 L+ A+V + R+ + + F Y + I + G+SG++ P A +P+ + Sbjct: 325 GLVGAAVGVRPQRTGK-ATSFGISVVIIFGYYLLSFITSAMGESGVITPFLAGWVPLFI 382 >gi|148556807|ref|YP_001264389.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] gi|148501997|gb|ABQ70251.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] Length = 364 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 127/357 (35%), Gaps = 2/357 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + Y + +L L +I++ +DL + P ++ + R P II Sbjct: 10 TMTLYMARMFLVRFAAVLAALVIVLMALDLLGESGDILAYPGNGDAQLWLYVTLRTPQII 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +PF L+ ++ F LN+ SE++ +A GIS Q+L P VV S+ +GI + + Sbjct: 70 ARFLPFAALLATLITFVTLNQNSEIISMKAAGISAHQILAPLVVASLGVGIVSFTFNERV 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + Q + I+P + + + I A + + T Sbjct: 130 VARATAT-LTAWQDADYGPIPRDRGIVPNIWVRDGDDLIHATAVRGRGAQARLDSVTIYD 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D I K + + + D F + Sbjct: 189 RDGGRLISIIKGERAVQAAGGWRITGASRFDVAKGVTLRLAGFDFAKGVTADRFTLANVD 248 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 AS+S ++ ++ + + ++ + PL V M L+AA + +RS Sbjct: 249 PASKSIVQLRTAIADLDAAGRPTGPLRAGLWH-KLSGPLSAVLMPLLAAVAAFGLARSGH 307 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 I G+ GF + + G G P AA P +L + + +L++ E+ Sbjct: 308 LFIRAVIGMALGFAYFVADNFALAMGNLGAYPPFLAAWAPFLLFLLIGETVLIRTEE 364 >gi|16332044|ref|NP_442772.1| hypothetical protein sll0496 [Synechocystis sp. PCC 6803] gi|1001356|dbj|BAA10843.1| sll0496 [Synechocystis sp. PCC 6803] Length = 394 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 44/371 (11%), Positives = 119/371 (32%), Gaps = 16/371 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + L+ + L I N +++ A + +VP + Sbjct: 25 DRYVARQLIPPFLFSVGVVASLGLAIGNLSDLGNKIVEKNLPVAKAAEVLLLKVPEFLAY 84 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P ++ ++ F L+ E++ R+ G+S+++L+ P VV S+L+ + ++ + Sbjct: 85 SLPVAVMLATMMTFGRLSGDCEIIAIRSCGVSLYRLILPAVVLSLLVTGWAFVLTEWVVP 144 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ--------------DIFIGAKKILP 171 ++ + D + + + K + Sbjct: 145 VANYRATSILIESIDEEHPFWQNRDVFYPEFEEIKLDNGQTARRLKSLVYAEKFDGKEMQ 204 Query: 172 ENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP 231 + + + + D + ++ E + + + + + +P Sbjct: 205 NLTVLQWTENHLKHIVLSDNATWNNDNKRWDFFHGTVYRLTETEDYQEAVPFTNKQIALP 264 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLI 290 F + + E + + + + + P + + ++ Sbjct: 265 QSAFDFARQGRDPYEMTIAEAQDYIKILKLIGDEKKTQFFQVRTEQKLAFPFVCIVFAVV 324 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 +++ R ++ I F Y + S G G++ P AA +P + + + Sbjct: 325 GSAIGARPQRISR-ATGFGLTIVIIFAYYILGFFSGSLGIVGLISPTLAAWLPNFVGLGV 383 Query: 351 SILILLQKEDG 361 I +L + G Sbjct: 384 GIWLLYEFNQG 394 >gi|260221416|emb|CBA29957.1| hypothetical protein Csp_A14750 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 384 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 124/372 (33%), Gaps = 17/372 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP--NYSISRGAVLAATR 58 + L + + + LG M L F D+ E + + Y + + + A Sbjct: 16 LMKTLRKLLYGEVITAVTLVTLGFMALFFFFDVVEELQSVSRIASSGYQVPQALIYVALM 75 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +P + ++ P L+ I V L R+SE I R G+ W+ L + + +FT Sbjct: 76 IPAHVYELFPITVLIGTIFVMARLARSSEFTILRTSGLGPWRALRTLLALGLGFVLFTFA 135 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 V + +A +K L ++ G W++ + + + + + Sbjct: 136 VGDYVAPLADKTAQLLKSRF--QGKISVGKTGAWLKERQAYGSYSVNVGALSSDATLKDV 193 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID--------KNSTTLNI 230 ++ + + ++ L + V ++ P S Sbjct: 194 RVYEFDNQGKVVSLTEAKAGTFGDDESWMLTQGVRTEFTSGPDQVSKVDRVAFESFRWPT 253 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 I + + ++ + + N + + E QF+ + PL + M ++ Sbjct: 254 QISAEMVAAAVLRPERMGTIDLFQYIRHLNANGQ-SAQKYEIQFWKKVFYPLSCLVMVVL 312 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + RS G+ +G + ++ G P A +P ++ Sbjct: 313 SLPFAYLHFRSGSIAGYTFGGVMAGISFVLLNNVLNDLGNLQGWQPWITAALPGLIYSFF 372 Query: 351 SI----LILLQK 358 S+ ++L++ Sbjct: 373 SLAAFTWLVLRR 384 >gi|313894646|ref|ZP_07828209.1| permease, YjgP/YjgQ family [Veillonella sp. oral taxon 158 str. F0412] gi|313440836|gb|EFR59265.1| permease, YjgP/YjgQ family [Veillonella sp. oral taxon 158 str. F0412] Length = 363 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 131/359 (36%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K ++ L+ + + Q + +P Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ F L+ TSE+V+ RA G+S +L P + ++++ I V Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALMISIGAVAFNE 120 Query: 122 PIATSGEKIGIDL-IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + ++ N Q + I ++ + + AK E T Sbjct: 121 FVVPRTNHMYQTIVREEIMKNATPQTQNHIVLKAMNGDELGTLMYAKSYNAETKQLSMIT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMD 235 + K+ ++AD AI ++ + Y + +L I Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDVSAGDGVERTMKFKEQSLPIKSAPK 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + + E+ ++ + K+ + + E + Y IPL L+ A + Sbjct: 241 DIQQDQRKPEELTIKELRHQIK-AYKAAYTNANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ RS+ + F+ Y ++T + GK G L V AALIP L I + + Sbjct: 300 LQKQRSSSSIGFGISILII-FIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIAGLYL 357 >gi|218961269|ref|YP_001741044.1| putative Permease [Candidatus Cloacamonas acidaminovorans] gi|167729926|emb|CAO80838.1| putative Permease [Candidatus Cloacamonas acidaminovorans] Length = 362 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 131/363 (36%), Gaps = 7/363 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y + +L+T L L + + VID+ + ++ + + + R+P Sbjct: 1 MRILDKYIIREFLRTYLIIFLSFVAIFVVIDVIDNLPRLI-RNGATAQQATIYYLMRLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ + + L++ +E + RA GISI + + P +++ I + Sbjct: 60 LLVLTSPVTVLLTGLFMMSALSKHNESIAIRAAGISIKRAMLPLFGIGLIISIAVAVFGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E + + + D + +N++ + Sbjct: 120 YVVPWAETTKNYVYNVQIKGQQPDDQMLKARIHYQGKANDFYYFGFFDGYKNNLKIIDLT 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-----NSTTLNIPIKMDG 236 K +I A A + LK ++ + + + ++ Sbjct: 180 RIDFKTKQITEHITASSADWNGSRWILKDCDLRRFANGKQVFMAHYPQTDLVILDVQPQD 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F + S++ S +F+++ + + K + R + I PL + + ++ Sbjct: 240 FIRISQKTLSLNFWQLKEYIGRMKKLGD-NAAREIVDLHMKISFPLTNLIVIFFFIPIAT 298 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS I+ G+ F+ ++ + +S G + I+ P AA P I L + L Sbjct: 299 SNIRSKGRGWIIMLGLVVCFIYLIVVRVCQSLGYNSIINPFWAAWFPNIFFTLLGLGFLH 358 Query: 357 QKE 359 + E Sbjct: 359 KAE 361 >gi|291614864|ref|YP_003525021.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] gi|291584976|gb|ADE12634.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] Length = 358 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 132/362 (36%), Gaps = 10/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + ++L ++DL N MG +Y + + +P Sbjct: 1 MRLLTRYLRREIYASVALVFAALIMLFALLDLVNELNSMG-RGDYRLGYVLLFVTLTIPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++ P L+ I + +SEL + R+ G+S+ Q++ V + L + L Sbjct: 60 HIYELFPVAVLIGTIFALVQMAASSELTVYRSSGVSLKQMIVMLVKIGLPLVVLCFLFGE 119 Query: 122 PIATSGEKIGIDLIQQWKD-NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA E++ +L + ++ ++ W + FI + +LP+ + + Sbjct: 120 VIAPPSERMAQELRMKAQNLKVSVKEFRSGVW----AKDERSFINVRSMLPDTSLLDVSI 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 + + + D+ +L V + + + ++ + + D Sbjct: 176 YEFDATYHLRSITSAEHASYLDEDRWQLDGVRQTLFSKQGATTDNRPRAEWHTSLNPDIL 235 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + + + + N R E + +V PL ++ M L+A S Sbjct: 236 SVLLVVPEQMSAWNLYQYTMHLRE-NHQKTSRYEIAMWNKLVYPLAVLVMMLLALPFSAY 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + GI G + + + + G P+ +A L ++L++ +L + Sbjct: 295 QRREGGISGKIFMGIVLGLSFHFVGRLFANVGALNDWSPLLSATAMSWLFLALAMGMLWR 354 Query: 358 KE 359 E Sbjct: 355 TE 356 >gi|320107369|ref|YP_004182959.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] gi|319925890|gb|ADV82965.1| permease YjgP/YjgQ family protein [Terriglobus saanensis SP1PR4] Length = 782 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 116/368 (31%), Gaps = 14/368 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P +L Y + +L + L ++L V E+ + + +P Sbjct: 416 PLLLDDYVMREFLTSLALVLSSFLVLSVVFSFFELIGDIIRNR-TPLVTVGGYLLNLIPY 474 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I + P L+ +V LNR+SEL +A G+S+++++ P V + +L + + Sbjct: 475 MIYSLTPLCALIAVLVTVGGLNRSSELTAMKASGMSLYRIVAPIFVLAAVLAVGLFAFDD 534 Query: 122 PIATSGEKIGIDLIQQWKDN------GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI 175 + L + K +K S + + Sbjct: 535 LYLPQANRRQEALRSEIKGKPAQTFLRPDRKWISGQEANGSPTRIFYYQFFDSDKDVFAN 594 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNI 230 F + + + +++ + + ST I Sbjct: 595 LTVFEFQPGSFLLQRRIFATSARWNPQVQQWEMENGWQRTFNHESIATYQPFATSTFPEI 654 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 F+K S S+ ++ + +S F R Q I PLM + M + Sbjct: 655 HELPAYFKKESRPSQEMSYGDLSAYIHDLKQSG-FDTMRLRVQLNHKIAYPLMTLVMAIF 713 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A ++ + A I I ++ +S G L P+ AA +L Sbjct: 714 AVPFAMMMGKRGSLAGY-ATAIGMAIAYQLIASVFESMGNVNALPPMLAAWSVDLLFALG 772 Query: 351 SILILLQK 358 +LL+ Sbjct: 773 GTYLLLRT 780 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 102/360 (28%), Gaps = 7/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + + + ++F+ ++ + + + + +P Sbjct: 1 MRILTRYILREVVSHAMLGGALFTFVLFMQRDLGHILELAVRGSATPNDVGRILLYSLPA 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP LV ++ L+ SE+ RA G + Q + + +++ + ++ Sbjct: 61 TLTFTIPMTVLVGILLGLGRLSADSEVTAMRASGFGVMQFVRVVSMSTVVALLVGLVNSL 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP----ENHIWE 177 IA + L K + + + + + ++ Sbjct: 121 YIAPKSTASLLRLENDLKSSQASFEVQPRVFYEDFKNYVLYVQDTQPSQGATIWKHVFLA 180 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 D T A + P N +T Sbjct: 181 DLTQPATPYITTANQAVVAVGKQQTLRLHFMDGSTHQISPTDPNQYNISTFAENDVPMQA 240 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF--YFLIVIPLMLVAMTLIAASVS 295 + + +RS + + R + P+ V + L+ + Sbjct: 241 GQQEDIKLTRSDAPMAAMTAGQLWQAQPGPQRRAAMIELNRRLSYPIACVVLMLVGVPLG 300 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L SR I F+ Y + ++ + K G L PV +L +L+L Sbjct: 301 LS-SRRGGKSTGFVLTIVLVFLYYFLSSVGVALAKQGKLHPVIGVWAANVLFGFAGVLLL 359 >gi|270157966|ref|ZP_06186623.1| putativeYjgP/YjgQ family permease [Legionella longbeachae D-4968] gi|289163767|ref|YP_003453905.1| membrane protein [Legionella longbeachae NSW150] gi|269989991|gb|EEZ96245.1| putativeYjgP/YjgQ family permease [Legionella longbeachae D-4968] gi|288856940|emb|CBJ10754.1| putative membrane protein [Legionella longbeachae NSW150] Length = 356 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 125/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + + L + L I + + +G + +Y I + ++P Sbjct: 3 MKILDRYIAKTVIGSIGLVTLMLIGLQIFILFVDQISDLGRV-DYGIVQATFFVMLQMPY 61 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P +L+ ++ L SELVI RA G+SI Q+ + S+LL IF ++ Sbjct: 62 QVYLFFPMASLLGTLIGLGILANHSELVIMRASGMSIGQITVAVLKASVLLIIFVTVLGE 121 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + D G ++ W++ +N + ++ N++ + Sbjct: 122 TLVPYLSHYANDYKTAAISGGQTLRTSKGFWLRYNNDFISV-----GVVLSNNVLNNIYQ 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQ 238 D ++ + + V + ++G S ++ +K Sbjct: 177 FRFDNQHHLKMSRFIREVRHTPTGWIAYDVQQTEFGGDQTKAQAFASLPWDVSVKPKILT 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + E+ + + N + + + F ++ P + M +++ Sbjct: 237 ISSIDPDEMNLRELNRYIRAQK-LNHQNIHNYQFAFLQRLIQPFTTMVMMILSIPFIFGP 295 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + G GF + + L P +AL P ++ L + ++ + Sbjct: 296 LRSTTMGSKLLVGAAVGFSFHILNRFFGPLSTVFQLPPELSALGPTVIFALLGLYLMKR 354 >gi|294012649|ref|YP_003546109.1| putative permease [Sphingobium japonicum UT26S] gi|292675979|dbj|BAI97497.1| putative permease [Sphingobium japonicum UT26S] Length = 367 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 118/357 (33%), Gaps = 2/357 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y + +L T L + ++ +DL + ++ A R P I+ Sbjct: 12 LGWYMARLFLTRTFAVLAMLVAVLQTLDLLGESGDILAYAGNGDAQLWHYVALRAPQIVA 71 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +PF L+ +++ +LN+ SE++ +A G+S Q+L P + ++ + + + I Sbjct: 72 RFLPFSVLLGTLIMLASLNQNSEIISMKAAGLSAHQILAPLLAAALGVALISYAFNERIV 131 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + I Sbjct: 132 ARSTARLSAWQAVDYGPLPPETGVKASPWVRDGNNLVTAAIVAGRGTAVQLRKVEIFNRI 191 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFSEQ 243 + I + L+ ++ R + + I+ D F Sbjct: 192 NNTLTTIVQAPRGHYDASTRSWVLEDARQFDVARGTERQIGTVRFGRDIRPDQFTLAKVD 251 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + +F ++ +S + + E + + PL + M ++ + + +RS Q Sbjct: 252 PDALTFSQLQAAISDLHDAGRP-TAELEGSLWHKLSGPLSALLMPILGSVAAFGLARSGQ 310 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G+ GF + + G G P AA P +L + + +L + E+ Sbjct: 311 LFVRAVLGMALGFAYFVADNFSLAMGNLGAYPPFLAAWAPFLLFLLVGETVLFRTEE 367 >gi|121591646|ref|ZP_01678888.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121546494|gb|EAX56709.1| conserved hypothetical protein [Vibrio cholerae 2740-80] Length = 338 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 116/340 (34%), Gaps = 3/340 (0%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 L+ + L +I E ++GE +Y + + + +P ++ P L+ ++ Sbjct: 1 MVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIPRDVEMFFPMAALLGALIG 59 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 L +SELV+ +A G S + + +I L I L+ A +K+ D+ Sbjct: 60 LGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKMARDMRAFA 119 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADL 198 G W + +N I + L ++W + + Sbjct: 120 TSGGAIMSVRTGVWARDANDFIFIAKVENEHLYGLNLWRFDENKKLSTVIFSEQVDYVAN 179 Query: 199 AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 L ++V + D + + S + + + Sbjct: 180 NEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGLSDYVHY 238 Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 ++ + R E + + P+ + M L+A S RS + G+ +GF Sbjct: 239 LK-ASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGARILSGVIAGFSF 297 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 Y L P+ AL P ++ +++++ +L +K Sbjct: 298 YISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 337 >gi|89075942|ref|ZP_01162317.1| putative permease [Photobacterium sp. SKA34] gi|89048383|gb|EAR53961.1| putative permease [Photobacterium sp. SKA34] Length = 338 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 107/338 (31%), Gaps = 2/338 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + T L + L +I E ++G+ +Y + + +P Sbjct: 1 MFKILDWYIGRTIIATFSLTLSTLVGLSAIIKYVEQLRKVGQ-GSYDLLKALYFVLLSMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P L+ ++ L +SELV+ +A G S + + ++ + I VL+ Sbjct: 60 QDIIMFFPMAVLLGALIGLGMLASSSELVVMQAAGFSKLDIGLSTLKTAVPMMIVVVLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ + W G + W + N + + F Sbjct: 120 QWGAPQAQKMAREYRSAWIYGGSVIAAQSGVWAKNDNSFIYMGRVHDLNKVDVVNIWQFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + R D A + + S + D Sbjct: 180 NKGQLEDVTSAKRASYDKATGWTMHDVTITDMIGSSQLTNSQIASKHWETTLTPDKLAVV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +++ ++ R + F+ + P+ + M L+A S R Sbjct: 240 TVKPEELSLSGLYHYVNYLKET-KQDASRYDLAFWRKALQPISIAVMMLLALSFVFGPLR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 S V G+ GF Y + L P+ Sbjct: 299 SVTMGARVLSGVIFGFAFYISDQVFGPMILVYRLPPIL 336 >gi|15677421|ref|NP_274577.1| hypothetical protein NMB1571 [Neisseria meningitidis MC58] gi|304387020|ref|ZP_07369275.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|7226818|gb|AAF41924.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|304338892|gb|EFM04991.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|308389705|gb|ADO32025.1| hypothetical protein NMBB_1800 [Neisseria meningitidis alpha710] gi|316983819|gb|EFV62799.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325130630|gb|EGC53373.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis OX99.30304] gi|325134626|gb|EGC57266.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M13399] gi|325140779|gb|EGC63293.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis CU385] gi|325199830|gb|ADY95285.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis H44/76] gi|325201753|gb|ADY97207.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240149] gi|325204535|gb|ADY99988.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240355] gi|325205694|gb|ADZ01147.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M04-240196] gi|325208503|gb|ADZ03955.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis NZ-05/33] Length = 356 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 136/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++IP L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELIPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G ++ + I +K + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|288799848|ref|ZP_06405307.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333096|gb|EFC71575.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] Length = 377 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 113/354 (31%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL Y K ++ T ++ +L + + V D+NE + + + A VP Sbjct: 18 KILDWYIIKKFIGTYIFSILLIISVAIVFDVNENLARFAQYHAPLKAIVFDYYANFVPYF 77 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ L+ + + + + Sbjct: 78 ANLFSPLFVFIAVIFFTSKLAGNSEIISILAAGVSFKRLMRPYMISCALISMLSYYLSSN 137 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +K+ +D + I D + Sbjct: 138 VIPHGTVIRQNFEALYKNKTKNTSADNVLLQVDKGVIAYIQHYDNNSKRGYGFSLDKFNN 197 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D + + + + I ++ Sbjct: 198 KKLVSHLTATEIQYDTISDTKYHWTISNWKTRKLEGLKEKITTGAQRDTIIMMEPTDLVY 257 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + ++ +S + + + +++ I +T I S+S Sbjct: 258 SKGQQETFTSAQLQDYISKQIDRGSSNVVQYQVEYHKRIASSFASFILTTIGLSLSSR-K 316 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + P+ AA IP I+ ++ Sbjct: 317 RKGGMGLYMGIGLALSFGYIMLQTVSATFAINANTPPIIAAWIPNIIFSLVAYF 370 >gi|260754017|ref|YP_003226910.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553380|gb|ACV76326.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 364 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 125/367 (34%), Gaps = 10/367 (2%) Query: 1 MPGILW------RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVL 54 M L+ Y K ++ L + ++ +D+ ++ + + Sbjct: 1 MIKRLFASRQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQAELFHY 60 Query: 55 AATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGI 114 R P +I + +PF L+ ++ LN+ SE++ +A GIS Q+L P + L+G Sbjct: 61 VLLRTPQLIARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGC 120 Query: 115 FTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + + + + T + + + + I + + +N Sbjct: 121 VSFVFNDHLVTRATAKLDAWQA-VDYGQPPPAATSGVNIWLRDGDHLIHVDNVQGYGDNV 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS-TTLNIPIK 233 T + ++ AD L KV + + + S +N + Sbjct: 180 RLSGITVYN-RSQKTLVSILSADTGQWTGHGWHLNKVKSFDVAADTVTEKSVLDINTDLP 238 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + F + + + + + + + + + + M ++ + Sbjct: 239 PERFTLADVKADEMEVVPLYRAIKALDAAGRPTDELKASLIH-RFTGAFAAILMPILGSV 297 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +RS + + + G+ GF + + G G P+ A+ P IL + + Sbjct: 298 AGFGLARSGRLFVRIVIGMSLGFAYFVADNFALAMGNLGTYPPLLASCSPFILFLLIGEA 357 Query: 354 ILLQKED 360 +L++ E+ Sbjct: 358 VLIRTEE 364 >gi|149186432|ref|ZP_01864745.1| predicted permease [Erythrobacter sp. SD-21] gi|148830021|gb|EDL48459.1| predicted permease [Erythrobacter sp. SD-21] Length = 365 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 133/358 (37%), Gaps = 3/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY K ++ L L+ ++++ ++DL ++ + A+ RVP +I Sbjct: 10 TLTRYLAKLFVVRILAVLVMLVLVLMMLDLLSNSGKILAVEGNGQGELLKYASLRVPQLI 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+ +P+ L+ ++ LN+ SE++ +A G+S Q+L P ++ ++++G + + + Sbjct: 70 QRFLPYSVLLATLISLVTLNQNSEVIAMKAAGLSAHQVLAPLLLTALVVGGVSFVFNERV 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 T ++ S D T Sbjct: 130 VTRATATLKAWDAADWGPVPEESSVRANVYLADGSNVLTAAQLTGSGDAI-RMRDVTWYR 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFSE 242 + I+ + DA A +L+ + ++ +S + + D Sbjct: 189 RSPEGTIVEQVDAARATYAGPGWRLENIERFEVAAAASSTGDSLVVGEGLTPDQIDLAKI 248 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F+E+ +++ + +++ + PL M L+ A + +RS Sbjct: 249 DPDAVPFWELGERIDAFEDAGRR-TGEMRAKWWHKLSGPLSSFLMPLLGAVAAFGLARSG 307 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 Q + G+ GF + + + G G P+ AA P L + +L++ E+ Sbjct: 308 QLFVRALIGMALGFAYFVVDNAALAMGNFGGYPPLLAAWAPFFLFALIGETVLIRTEE 365 >gi|218768539|ref|YP_002343051.1| hypothetical protein NMA1760 [Neisseria meningitidis Z2491] gi|121052547|emb|CAM08887.1| conserved hypothetical integral membrane protein [Neisseria meningitidis Z2491] gi|319410788|emb|CBY91173.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] gi|325128630|gb|EGC51499.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis N1568] gi|325144869|gb|EGC67157.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240013] Length = 356 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 136/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G ++ + I +K + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|161870426|ref|YP_001599598.1| hypothetical protein NMCC_1474 [Neisseria meningitidis 053442] gi|254805326|ref|YP_003083547.1| putative permease [Neisseria meningitidis alpha14] gi|161595979|gb|ABX73639.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 053442] gi|254668868|emb|CBA06970.1| putative permease [Neisseria meningitidis alpha14] Length = 356 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 136/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGIWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G ++ + I +K + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|257095655|ref|YP_003169296.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048179|gb|ACV37367.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 357 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 121/362 (33%), Gaps = 11/362 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY + + L LLG + L D+ +G+ Y + R+P Sbjct: 1 MKLYRRYVGREVMGAVLLVLLGFLALFAFFDMLGEIRNVGQ-GGYQLHHAFAFVLLRIPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ + L R SE+ + R G+S LL + +L + T L+ Sbjct: 60 RVYELMPIAVLIGTLYALSTLARHSEITVLRVSGLSSGGLLTVLFQVAGVLAVLTFLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E+ L + + Q W++ ++ +I+ + Sbjct: 120 YVAPPSERAAFQLRSKERTGMVGQDLRSGLWVKDERSFINV-----RIVLPDTRLRGIRI 174 Query: 182 ITIDKKNKIIHRKDADLAIIY-NDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 D+ K+ +A D +L VV+ + S + D Sbjct: 175 FEFDEDAKLRSMTEAAEGEYVVPDSWRLTNVVQTVLEGGRAEVRSVPDMQWRSALNPDIL 234 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + N R + F+ ++ PL + M +A Sbjct: 235 AVLLVSPDRMSLRHLSAYTKHLAD-NHQTTNRYDIAFWKKVIYPLAGLVMVALALPFGGA 293 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 SR + + G+ G + + + + + G P+ +A P IL + + ++ Sbjct: 294 HSRVEGVGLKIFVGVMIGTLFHMLNGLFSNLGAINHWSPLLSAATPSILFLLAATAMIWW 353 Query: 358 KE 359 E Sbjct: 354 VE 355 >gi|218440672|ref|YP_002379001.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] gi|218173400|gb|ACK72133.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] Length = 388 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 63/372 (16%), Positives = 126/372 (33%), Gaps = 16/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I+ RY F L L+ + L I + S++ + + ++P Sbjct: 16 PSIVDRYLFMELLIPFLFGMGLFTSLGIAIGTLFDLVRKVTESGLSLTVALQILSLKMPE 75 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P L+ ++ + L SEL+ R+IG+S ++LL P ++ S+++ T + Sbjct: 76 FIVLAFPMSILLATLMAYSRLASDSELIALRSIGLSPYRLLVPSIILSLMVTGVTFFFSD 135 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + ++ + + +L E F Sbjct: 136 YVAPQATQQAKQILADALKKDQPAFVEDNIIYPEYRKITLENGRDQTVLTRLFYAEKFDG 195 Query: 182 ITIDKKNKIIHRK---------DADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTT 227 + + + + + + ++ Y R + Sbjct: 196 QQMQGLTILDRSQPGVNQIVTSQSAMWNLDSNSWDFYNGTIYLIAPDGSYRNIVRFQHQK 255 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS-NIFHNYRAETQFYFLIVIPLMLVA 286 L++P K + A S E + + S N + E + +P + + Sbjct: 256 LDLPRAPLDIAKGKQNPAEMSIAEAKEYLRIVKLSKNEPRARKVEVRIQEKYALPFVCIV 315 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 LI +++ L+ +N I F Y + I S G GI+ PV +A +P L Sbjct: 316 FGLIGSAIGLKPQ-NNNKATSFGICIILIFSYYLLSFIASSMGIWGIISPVVSAWLPNTL 374 Query: 347 TISLSILILLQK 358 I ++L+Q Sbjct: 375 GIIAGTVLLVQT 386 >gi|34498371|ref|NP_902586.1| hypothetical protein CV_2916 [Chromobacterium violaceum ATCC 12472] gi|34104225|gb|AAQ60584.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 358 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 123/358 (34%), Gaps = 2/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY ++TL+ LL + L DL +G NY+ A A +P Sbjct: 1 MKLIHRYIVSTLTQSTLFTLLALLGLYGFFDLLGEVPALGT-GNYTAGVMATYVALLIPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L +SE + R G+++ Q+ + + + T+L+ Sbjct: 60 HAYELMPLAVLIGGMVAMTQLASSSEYTVIRTSGVTLKQIAATLLKFGLGFAVLTILLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + + ++ W++ + ++ + Sbjct: 120 FAAPWAMQEAERTRLTATHSIVAKEFRSGTWVKDNQNFINVHEMLPDNTLLGIRIYTYDQ 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ +I R +K+ V I + ++ + Sbjct: 180 DFKLERTRIAERGTFSKQDRSWQLENVKETVLAPNRTISAVYPTLKWKSIVEPEILSVLL 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S + ++ + N R E + + PL ++M L+A + + + R Sbjct: 240 VVPEQMSAHNLLTYIEHLK-KNKQQTQRYEIALWSKLFYPLACISMALVALAFTPQQRRH 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 Q I + GI G + + + G + +A +P ++ + I I+ ++E Sbjct: 299 GQLGIKLFAGICLGVTFHFVNRLFGHLGLLYDWNAILSATLPTLIFLLGGIAIIAKQE 356 >gi|325198681|gb|ADY94137.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis G2136] Length = 356 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 132/361 (36%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ + + I +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAINGKISTGNTDI-----WLKEKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G ++ + I +K + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|121635228|ref|YP_975473.1| hypothetical protein NMC1491 [Neisseria meningitidis FAM18] gi|120866934|emb|CAM10694.1| conserved hypothetical integral membrane protein [Neisseria meningitidis FAM18] gi|261392197|emb|CAX49711.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] gi|325142744|gb|EGC65119.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis 961-5945] Length = 356 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 135/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGIWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G ++ + I +K + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|84622419|ref|YP_449791.1| hypothetical protein XOO_0762 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578606|ref|YP_001915535.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366359|dbj|BAE67517.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523058|gb|ACD61003.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 368 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 121/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V +G+ +Y+ A VP Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKDIGQ-GSYTFGHAVAYVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ I Sbjct: 68 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKS-DIIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N D S W + + + G +K+L D Sbjct: 128 WAQNQADTLKASARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGDTALDLHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + + L++V + + + + + Sbjct: 188 YHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + + +++ E Q++ PL ++A+ + A S Sbjct: 248 AGLAKPRNLSAHDLEQSIEYRSRNG-LDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRR 366 >gi|325132744|gb|EGC55427.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M6190] gi|325138629|gb|EGC61188.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis ES14902] Length = 356 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 135/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGIWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G ++ + I +K + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLTGRFFGFTSQLYGIPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|307294586|ref|ZP_07574428.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] gi|306879060|gb|EFN10278.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] Length = 367 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 117/357 (32%), Gaps = 2/357 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + Y + +L T L + ++ +DL + ++ A R P I+ Sbjct: 12 ISWYMARLFLTRTFAVLAMLVAVLQTLDLLGESGDILAYAGNGDAQLWHYVALRAPQIVA 71 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +PF L+ +++ +LN+ SE++ +A G+S Q+L P + ++ + + + I Sbjct: 72 RFLPFSVLLGTLIMLASLNQNSEIISMKAAGLSAHQILAPLLAAALGVALISYAFNERIV 131 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + Sbjct: 132 ARSTARLSAWQAVDYGPLPPETGVKASPWVRDGNNLVTAAIVAGRGTAVQLRKVEIFNRV 191 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFSEQ 243 + I + L++ ++ R + + I+ D F Sbjct: 192 NNMLTTIVQAPKGHYDPVAKSWVLEEARQFDVARGTERQVGTVRFGRDIRPDQFTLAKVD 251 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + +F ++ + + E + + PL + M ++ + + +RS Q Sbjct: 252 PDALTFSQLQAAIGDLRDAGRP-TSELEGSLWHKLSGPLSALLMPILGSVAAFGLARSGQ 310 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G+ GF + + G G P AA P +L + + +L + E+ Sbjct: 311 LFVRAVMGMALGFAYFVADNFSLAMGNLGAYPPFLAAWAPFLLFLLVGETVLFRTEE 367 >gi|302342717|ref|YP_003807246.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] gi|301639330|gb|ADK84652.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] Length = 359 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 121/359 (33%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y +LK + L+ + L + D E + E S + +VP Sbjct: 1 MRILGLYVAGEFLKVFGFLLVAFVSLFTLFDFIEKVDNFHEAL-VPASTMLMYFLLQVPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II + P L+ I+ +++ E + ++ G+S+ + P V+ ++ + + T L+ Sbjct: 60 IISLLSPLAVLLGTIIALGLMSKRGETIAIKSSGVSVMRFTLPIVLLALTITLSTALINE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + P + + Sbjct: 120 MALPGTKARTNHIWNVMVEKRPSSAYSHEKF---WFKGNGSIYHIGLFDPLGQVLSNVVY 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKV----KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 D + R DA A K L + Q G + + N+P + + F Sbjct: 177 YRFDDHFNLAERIDARRATYIGGKWLFFLGLHQQRLPQGGYSAVVFDELEKNLPERPEDF 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + S+ E+ + + + R + + I P + V M LI ++L Sbjct: 237 SRLSKPSEEMGLAELSDHVGKVDAEG-YDTRRYQVDMHCKISYPFICVIMALIGIPLALF 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKS-FGKSGILLPVAAALIPVILTISLSILIL 355 R + G+ + + +S FG G+L P+ AA +P + + ++ Sbjct: 296 RERGRALAPGIVVGMLVALVYWISFGYARSIFGYGGVLPPMMAAWLPNAMFALAGVGMI 354 >gi|21244279|ref|NP_643861.1| hypothetical protein XAC3554 [Xanthomonas axonopodis pv. citri str. 306] gi|21109927|gb|AAM38397.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 368 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 121/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V L +G+ +Y+ A VP Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNALASEAKNIGQ-GSYTFGHAVAYVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ I Sbjct: 68 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N D S W + + + G +K+L D Sbjct: 128 WAQNQADTLKASARYNSDMASSRYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + + L++V + + + + + Sbjct: 188 YHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + + ++ E Q++ PL ++A+ + A S Sbjct: 248 AGLAKPRNLSAHDLEQSIEYRRRNG-LDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRR 366 >gi|103487658|ref|YP_617219.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] gi|98977735|gb|ABF53886.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] Length = 366 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 114/353 (32%), Gaps = 1/353 (0%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + +L T L ++++ +DL ++ +P S R+P II+ + Sbjct: 15 YVGRLFLFRTFAILFALVLILQTLDLLGESGKILAVPGNGDSDVWRYVGMRMPQIIETFL 74 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PF L+ I+ LN+ SE+V +A G+S Q+L P + ++L+ + I T Sbjct: 75 PFSVLLGTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVAGISFAFNERIVTRS 134 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + + P + Sbjct: 135 TAALGAWQKVEYKRVPVDSGVRSNIWVRDGDDLINAETVETSGPAVVLRGVTIYERTRGV 194 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + D+ A+ + + ++ D F Sbjct: 195 LSSMLSADSARALPGGGWEMANARRFSRRSGTLEPLGTIVAAPNVRPDQFTLADVDGDEL 254 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 F ++ + + + + + I PL + M L+ A + +RS + + Sbjct: 255 PFLKLKAAIDDLEAAGRPVDA-LKGVLWHKISGPLSAILMPLLGAVAAFGLARSGKLFVR 313 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 G+ GF + + G G P AA P IL + +IL++ E+ Sbjct: 314 AIIGMALGFAYFVADNFALAMGDLGAYSPFLAAWGPFILFALIGEMILIRTEE 366 >gi|238019692|ref|ZP_04600118.1| hypothetical protein VEIDISOL_01566 [Veillonella dispar ATCC 17748] gi|237863733|gb|EEP65023.1| hypothetical protein VEIDISOL_01566 [Veillonella dispar ATCC 17748] Length = 363 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 130/359 (36%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K ++ L+ + + Q + +P Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ F L+ TSE+V+ RA G+S +L P + ++++ I V Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 122 PIATSGEKIGIDL-IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +Q N Q + I ++ + AK E T Sbjct: 121 FVVPRTNNMYQTIVREQIMKNASPQTQNHIVLKTMNGNDLGTLMYAKSYNAETKKLSMIT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMD 235 + K+ ++AD A+ ++ + Y + +L I Sbjct: 181 VQQFGEGGKLQQVENADTAVWNGQYWVMQNGIIYDISAGDGVERTMKFKEQSLPIKSAPK 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + + E+ ++ + K+ + + E + Y IPL L+ A + Sbjct: 241 DIQQDQRKPEELTIKELRHQIK-AYKAAYTNANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ RS+ + F+ Y ++T + GK G L V AALIP L I + + Sbjct: 300 LQKQRSSSSIGFGISILII-FIYYGVMTFAGALGKGGALPTVFAALIPDTLGIIAGLYL 357 >gi|167753885|ref|ZP_02426012.1| hypothetical protein ALIPUT_02170 [Alistipes putredinis DSM 17216] gi|167658510|gb|EDS02640.1| hypothetical protein ALIPUT_02170 [Alistipes putredinis DSM 17216] Length = 372 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 119/355 (33%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +L T + + +++V + D E + E + +P Sbjct: 13 FKILDRYILGKFLSTYFFAIAMIIVVVVIFDYVEKIDNFTETKAPLKAIIFDYYLNFIPF 72 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I Q T + I + +E+V + G+S +L+ P+ +G++++ ++ + Sbjct: 73 FINQFSGLFTFIAVIFFTSKMAYQTEIVAMLSGGMSFRRLMWPYFLGALIIASLSLGLNL 132 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + Q+ + + D + QI K + + Sbjct: 133 WLIPVSQRSCVAFENQYIPRKARFQYDKNIYRQIEPGTFAYIRNYSKESNQASFFSLEEY 192 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD--GFQK 239 + + + + + + L+ I +D + Sbjct: 193 ESGAMTASLEAAEVRFNPETKRWSARRYTTRTFDSLGVETFTQHRNLDTLINLDVNELGR 252 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + E+ + + + + + P+ +TLI S+S Sbjct: 253 TDQLIKTMNIVELNQFLEQQRSKGSDSINIIQVEQHARYAYPVGTFILTLIGVSLSSRKV 312 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + GI F I + F KSG L P A IP IL + +++ + Sbjct: 313 R-GGTGLHIGIGIALCFSYILFIRFFEEFAKSGTLPPWIAVWIPNILYLCIAVYL 366 >gi|56552290|ref|YP_163129.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543864|gb|AAV90018.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 364 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 124/367 (33%), Gaps = 10/367 (2%) Query: 1 MPGILW------RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVL 54 M L+ Y K ++ L + ++ +D+ ++ + + Sbjct: 1 MIKRLFASRQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQAELFHY 60 Query: 55 AATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGI 114 R P +I + +PF L+ ++ LN+ SE++ +A GIS Q+L P + L+G Sbjct: 61 VLLRTPQLIARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGC 120 Query: 115 FTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + + + + T + + + + I + + +N Sbjct: 121 VSFVFNDHLVTRATAKLDAWQA-VDYGQPPPAATSGVNIWLRDGDHLIHVDNVQGYGDNV 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS-TTLNIPIK 233 T + ++ AD L KV + + + +N + Sbjct: 180 RLSGITVYN-RSQKTLVSILSADTGQWTGHGWHLNKVKSFDVAADTVTEKPVLDINTDLP 238 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + F + + + + + + + + + + M ++ + Sbjct: 239 PERFTLADVKADEMEVVPLYRAIKALDAAGRPTDELKASLIH-RFTGAFAAILMPILGSV 297 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +RS + + + G+ GF + + G G P+ A+ P IL + + Sbjct: 298 AGFGLARSGRLFVRIVIGMSLGFAYFVADNFALAMGNLGTYPPLLASCSPFILFLLIGEA 357 Query: 354 ILLQKED 360 +L++ E+ Sbjct: 358 VLIRTEE 364 >gi|325136762|gb|EGC59362.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M0579] Length = 356 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 136/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ ++ L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLLSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I +++LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G ++ + I +K + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSIAAEENWPISVKRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|187479476|ref|YP_787501.1| permease [Bordetella avium 197N] gi|115424063|emb|CAJ50616.1| putative permease [Bordetella avium 197N] Length = 389 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 123/370 (33%), Gaps = 20/370 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + ++ LL + L L + + +GE +S+ + A +P + + Sbjct: 6 RYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGEK--FSMLALLYMQALALPTRLYDL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +L+ V +I + I L+ + Sbjct: 64 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLMRMLWVVTIPVMIGATLLSEFVTPI 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + ++ + + W + I + L + D T + Sbjct: 124 AEIKSGEADLTFRGKAGGGRLNSGYWFKEPTRDGGTRIINIQTLLADGQVRDVTLYELKP 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----------------KNSTTLN 229 ++ A + + + L VV+ + S L+ Sbjct: 184 DLELESLSKAAKGVFTDGDLLLSDVVQTRIAPEAAQALANAKQPPKPPAEVETLASLRLD 243 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S +I + + N R + V P L+ M Sbjct: 244 TTLSPERLLARVLTPERMSAATLIDYIDYL-HHNQLQADRQVVALWRKFVYPFTLLVMIT 302 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 IAA ++ +R V GI G + + + + G P AL P + Sbjct: 303 IAAPIAFMQTRRGGVGAKVFIGILMGVAFFMVNQLSLNVGMLSRWPPWLTALGPNAAAMI 362 Query: 350 LSILILLQKE 359 +++ L+ E Sbjct: 363 VALGALVMME 372 >gi|325917725|ref|ZP_08179913.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536054|gb|EGD07862.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 368 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 120/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V +G+ +YS A VP Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQ-GSYSFGHAVAFVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ + Sbjct: 68 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETVGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N D + W + N + G +K+L D Sbjct: 128 WAQNQADTLKTSARYNSDMAMARYSGLWAREGNTFLNALGGEEKLLANGGTALSLHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + + L++V + + + + + Sbjct: 188 YNLDTNGRLQQLTYASVAEHRDGRWTLRQVRRDTFQDRSVQRETFPELPWQSQLSPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +E+ + + + ++ E Q++ PL ++A+ + A S Sbjct: 248 SGLAKPRNLSAHELQQSIEYRRRNG-LDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRR 366 >gi|294793349|ref|ZP_06758494.1| membrane protein, YjgP/YjgQ family [Veillonella sp. 6_1_27] gi|294455780|gb|EFG24145.1| membrane protein, YjgP/YjgQ family [Veillonella sp. 6_1_27] Length = 363 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 131/359 (36%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K ++ L+ + + Q + +P Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ F L+ TSE+V+ RA G+S +L P + ++++ I V Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 122 PIATSGEKIGIDL-IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +Q N Q + I ++ + + AK E T Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLLYAKSYDAETKQLSMIT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMD 235 + K+ ++AD AI ++ + Y + +L I Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSAPK 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + + E+ ++ + K+ + + E + Y IPL L+ A + Sbjct: 241 DIQQDQRKPEELTIKELRHQIR-AYKAAYTNANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ RS+ + F+ Y ++T + GK G L V AALIP L I + + Sbjct: 300 LQKQRSSSSIGFGISILII-FIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIAGLYL 357 >gi|298492659|ref|YP_003722836.1| permease YjgP/YjgQ family protein ['Nostoc azollae' 0708] gi|298234577|gb|ADI65713.1| permease YjgP/YjgQ family protein ['Nostoc azollae' 0708] Length = 391 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 124/369 (33%), Gaps = 16/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY L L+ + +V ID + I+ + ++P ++ Sbjct: 20 IMDRYLAMQLLPLFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFILKLPYVM 79 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SEL+ R G+S+++++ V+ S L+ T + I Sbjct: 80 VYSFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVLTAVLLSSLVTAMTYIFNEQI 139 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + ++Q + + ++ KIL + F Sbjct: 140 APAANYEATRTLEQALKSDKPSFKQHNIYYPEYREVKEKDGSTTKILSRLFYADQFDGKQ 199 Query: 184 IDKKNKIIH---------RKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLN 229 + I ++ Y + R + L Sbjct: 200 MQGLTIIDRSREGLNQILVSESAQWNASQKVWNFYNGTIYLVAPDRSYRNILRFEHQQLQ 259 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 +P + S + + + ++++ + R E + I P + + Sbjct: 260 LPRTPLNLAENSRDYGEMNISQALQQLEVERLAGNPQKIRKLEVRIQQKIAFPFVCIIFG 319 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 L+ +++ R+ + + F Y ++++ + ++ IL P+ A +P + Sbjct: 320 LVGSAMGTIPQRTGR-GTSFGISVIVIFSYYLLLSVSGALAQADILSPLIGAWLPNSFGL 378 Query: 349 SLSILILLQ 357 + +L++ Sbjct: 379 VTGLFLLMR 387 >gi|269797613|ref|YP_003311513.1| permease YjgP/YjgQ family protein [Veillonella parvula DSM 2008] gi|269094242|gb|ACZ24233.1| permease YjgP/YjgQ family protein [Veillonella parvula DSM 2008] Length = 363 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 131/359 (36%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K ++ L+ + + Q + +P Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ F L+ TSE+V+ RA G+S +L P + ++++ I V Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 122 PIATSGEKIGIDL-IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +Q N Q + I ++ + + AK E T Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLMYAKSYDAETKQLSMIT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMD 235 + K+ ++AD AI ++ + Y + +L I Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSAPK 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + + E+ ++ + K+ + + E + Y IPL L+ A + Sbjct: 241 DIQQDQRKPEELTIKELRHQIR-AYKAAYTNANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ RS+ + F+ Y ++T + GK G L + AALIP L I + + Sbjct: 300 LQKQRSSSSIGFGISILII-FIYYGVMTFAGALGKGGALPTLLAALIPDTLGIIAGLYL 357 >gi|213855150|ref|ZP_03383390.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 356 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 119/349 (34%), Gaps = 3/349 (0%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 K T + L + L +I + + G+ NY + VP IQ P Sbjct: 9 KTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPKDIQIFFPMA 67 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + +A GE++ Sbjct: 68 ALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQM 127 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 + Q G + W + N I F + + Sbjct: 128 ARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRLQSVRY 187 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFSEQFASRSF 249 D ++ + +I + S T + D + + S Sbjct: 188 AASAKFDPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSI 247 Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 + + + S R + + I PL + M L+A S RS + V Sbjct: 248 SGLHNYVKYLKSSGQ-DAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVV 306 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 GI GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 307 TGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 355 >gi|29654138|ref|NP_819830.1| putative permease [Coxiella burnetii RSA 493] gi|161831591|ref|YP_001596891.1| putative permease [Coxiella burnetii RSA 331] gi|29541404|gb|AAO90344.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493] gi|161763458|gb|ABX79100.1| putative permease [Coxiella burnetii RSA 331] Length = 355 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 130/360 (36%), Gaps = 11/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L RY + T +L + + ++ +Q+G + +Y + + + T++P Sbjct: 1 MP-LLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSV-HYGLGQAFLYVLTQLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + Q+ P + ++ L +SEL++ R G+SI + V ++L+ + + Sbjct: 59 SDLYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVVMTFIG 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA E G + K+ W+ + I + + + + Sbjct: 119 EVIAPQLEASGEETKLTELSKAVGYKALGDVWLHGAQSFIHI-----GSVDAKNKISEVS 173 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 I+ K++++ A L V + Q+ + L I D Sbjct: 174 QFFINNKHQLLSAVYAPKGEYVKGHWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHL 233 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 Q+ + +S + + + ++ R F+ + PL V M + Sbjct: 234 QQGRKMVDRQSIVGLYHTIRYHQQAG-LQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG 292 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + GI GF Y + F + P+ AAL+P +L +++L Sbjct: 293 SLRQASMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRY 352 >gi|253583478|ref|ZP_04860676.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834050|gb|EES62613.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 362 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 119/361 (32%), Gaps = 7/361 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I+ RY K ++K+ L+ + + V L ++ + + +S V T +P I Sbjct: 4 KIIDRYISKNFIKSFFLSLIAFVGIFLVSQLFKVIRYVSD-GRFSADESIVYILTMIPKI 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + + P L+ +++ ++ E++ + GIS +++ + S ++ I L+ + Sbjct: 63 LIDVAPLAVLLGSLMTVSSMASNLEVISLKTAGISFKRIVLFPIFISAVIAIIVFLINDS 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + ++ + +++ N +G + + Sbjct: 123 LYPYSVRKNREIKDGGNTRREMPVEKRNAFLRGENSNYVYLMGKINRETGFGENIEIVDL 182 Query: 183 TIDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 + LK Y + + T + D F Sbjct: 183 NEEFNKVERIITAKEGRYNFTKKVWVLKDANIYNGKELKKAEEVKLFTEDKYDDEPDKFI 242 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + E+ K + + P ++ + S+ + Sbjct: 243 TKSVEPKTLTIKELKKSVREIKSIGG-DTRELLVEIGNRYSFPFSSFIISFLGLSLGSRY 301 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R I +A + G+ Y + ++ +G L P + IP I+ + + I + + Sbjct: 302 VR-GASAISMALSVALGYGYYIVQASFEALSINGFLNPFISGWIPNIIFLGIGIYFMYRA 360 Query: 359 E 359 E Sbjct: 361 E 361 >gi|167856192|ref|ZP_02478929.1| hypothetical protein HPS_08251 [Haemophilus parasuis 29755] gi|167852681|gb|EDS23958.1| hypothetical protein HPS_08251 [Haemophilus parasuis 29755] Length = 355 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 129/363 (35%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L + + L + L +I E +G +Y A +P Sbjct: 1 MNVLERYIGRTILASIMLTLFMLVGLGAIIKFVEEFRSVG-RGSYDGLHAAYYTLLTMPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ L SELV+ ++ G S +++ + +I L + T+++ Sbjct: 60 DIETFFPIAALLGSLMGLGGLASRSELVVMQSAGFSRFRIGLAVMKTAIPLMVLTMIMGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + G + W + N I ++ + Sbjct: 120 WGVPQTEQYARNMRSIAQSGGSMLATQGGFWAKDGNDFIYIR------QIQDERNLNNIL 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 I + K A+ A L+KV + + + T I Sbjct: 174 IYQFDNQVLKSIKQAEKATYSEQGWLLQKVDKSEIHESGITQTRETDQTWKTSITPSKLG 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F + R E F+ + P+ + M L+A S Sbjct: 234 IASLKPESLSISGLADYVGFLKDTGQ-DPKRFEITFWRKVFQPISMAVMMLLAISFIFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK-SGILLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GF+ Y + + L ALIP +L +S+ +L + Sbjct: 293 LRSSTMGAKIVIGILTGFVFYVANIVFGNLSLVVSWLPVPIGALIPSLLCLSVVWWLLNK 352 Query: 358 KED 360 K D Sbjct: 353 KRD 355 >gi|304321347|ref|YP_003854990.1| putative permease [Parvularcula bermudensis HTCC2503] gi|303300249|gb|ADM09848.1| predicted permease [Parvularcula bermudensis HTCC2503] Length = 364 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 154/359 (42%), Gaps = 6/359 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y K L L LL ++V +DL E + +P L R P +I + Sbjct: 7 YLAKRTLGGVLGLLLVIWLIVVSVDLIEAMRDIARIPGAGPIAALRLTLLRTPQLILSLS 66 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PFI L + + + R SE+ + RA G+S+W+L+ P V+ ++ G+ ++P+A Sbjct: 67 PFIFLFGTLWAYGQMARMSEIAVLRAAGLSVWRLIFPPVILAVAAGLLIATTLDPLAARL 126 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISN--PQQDIFIGAKKILPENHIWEDFTSITID 185 + + + + + W++ + + A++ + + E+ T Sbjct: 127 AETAQTVKNEARSGEEAAAKRPHLWLRQNEIGSDGIALLHAERYRENDPVLEEVTVWRRT 186 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI--PIDKNSTTLNIPIKMDGFQKFSEQ 243 + I R DA A+I ++L + P + + + I + + + Sbjct: 187 QDGAFIERLDAPRALIDAQVLRLMQARRSTSIATTAPQIEAEIEVPVAIDLRLLDQDRQT 246 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE-FSRSN 302 + S + + + + + + + +++ L +PL L AM ++A + +L +R Sbjct: 247 ADTLSVWALPETIRLMGDAGM-TTTKFRLRYHALWSLPLKLAAMVILACAFALGMNARGG 305 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 +++ GI +GF+L+ + + + ++ I+ AA P +L + ++ +LL +EDG Sbjct: 306 GTALLMGMGILAGFLLFILSELSAAIAEAAIVPVGLAAWAPALLAVLFAVTLLLYREDG 364 >gi|78049235|ref|YP_365410.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925500|ref|ZP_08186891.1| putative permease [Xanthomonas perforans 91-118] gi|78037665|emb|CAJ25410.1| putative YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544092|gb|EGD15484.1| putative permease [Xanthomonas perforans 91-118] Length = 368 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 120/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V +G+ +Y+ A VP Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQ-GSYTFGHAVAYVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ I Sbjct: 68 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N D S W + + + G +K+L D Sbjct: 128 WAQNQADTLKASARFNSDMASSRYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + + L++V + + + + + Sbjct: 188 YHLDPSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + + ++ E Q++ PL ++A+ + A S Sbjct: 248 AGLAKPRNLSAHDLEQSIEYRRRNG-LDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRR 366 >gi|282850060|ref|ZP_06259442.1| YjgP/YjgQ family [Veillonella parvula ATCC 17745] gi|282580249|gb|EFB85650.1| YjgP/YjgQ family [Veillonella parvula ATCC 17745] Length = 363 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 131/359 (36%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K ++ L+ + + Q + +P Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMQAFVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ F L+ TSE+V+ RA G+S +L P + ++++ I V Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 122 PIATSGEKIGIDL-IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +Q N Q + I ++ + + AK E T Sbjct: 121 FVVPRTNHMYQTIVREQIMKNASPQTQNHIVLKTMNGDELGTLMYAKSYNAETKQLSMIT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMD 235 + K+ ++AD AI ++ + Y + +L I Sbjct: 181 VQQFGEGGKLQQVENADTAIWNGQYWVMQNGIIYDLSAGNGVERTMKFKEQSLPIKSAPK 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + + E+ ++ + K+ + + E + Y IPL L+ A + Sbjct: 241 DIQQDQRKPEELTIKELRHQIR-AYKAAYTNANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ RS+ + F+ Y ++T + GK G L V AALIP L I + + Sbjct: 300 LQKQRSSSSIGFGISILII-FIYYGVMTFAGALGKGGALPTVLAALIPDTLGIIAGLYL 357 >gi|197287278|ref|YP_002153150.1| permease [Proteus mirabilis HI4320] gi|227357022|ref|ZP_03841393.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|194684765|emb|CAR46795.1| putative permease [Proteus mirabilis HI4320] gi|227162825|gb|EEI47785.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 359 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 125/344 (36%), Gaps = 3/344 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L +Y + L++ L L + L +I + ++G+ +++ + A + Sbjct: 1 MFGVLDKYIGRTILQSILMTLFLLVSLSGIIKFVDQLRKVGQ-GDFTTLDAGIYAVLNIL 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +Q P L+ ++ L SELV+ +A G + Q+ + +I L + TVL+ Sbjct: 60 KDVQIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTVLIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A GE+ + + ++ W + N I + + +F Sbjct: 120 EWGAPQGEQYARNYRAEKIMGNSLVSTNRGMWAKDGNQFIYINRIKSQNEMQGITLYNFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 + + + D ++++ +I K S + + Sbjct: 180 NNRKLETVRYASSATYDPDKKVWLLKQVEQSDLTSPQKITGKKQVSLEWQTRLTPEKLSV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + + + +S E F+ I P+ + M L+A S Sbjct: 240 VALDPDALSISGLYQYVKYLKQSGQESAN-YELNFWKKIFAPISVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 R+ + V GI GF+ Y + + + V AAL+P Sbjct: 299 RTVPMGLRVVTGIAFGFLFYIVNEVSGRLSLVYGIPAVVAALVP 342 >gi|300725025|ref|YP_003714351.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] gi|297631568|emb|CBJ92277.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] Length = 359 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 72/359 (20%), Positives = 130/359 (36%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L+T L L + L +I + ++G+ Y+ + VP Sbjct: 1 MFGVLDRYIGRTILQTILMTLFMLVSLSGIIKFVDQLRKVGQ-GEYTALSAGIYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IQ P L+ ++ L SELV+ +A G + Q+ + +I L + T+++ Sbjct: 60 KDIQIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQVAGSVMKTAIPLVLLTMVIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE++ + Q G + W + I K Sbjct: 120 EWVAPQGEQLARNYRSQKMFGGSLMSTTKGLWAKDGRDFVYIQSVGKDNALNGVSIYHVD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 K D ++++ ++GRI + S N + + Sbjct: 180 ENRKLLSVKYAASAVYDKDNQQWKLSQVEESDLTKFGRIIGSQRVSAEWNSQLTPEKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + S + + +++ R + + + PL + M L+A S Sbjct: 240 VSLDPDALSIRGLHQYITYLK-LGQQDAGRYQLNMWKKVFAPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R V GI GF+ Y + I + P+ AL+P +L LS+ +LL K Sbjct: 299 RCVPMGFRVVVGISMGFLFYVLNEIFGPLSLVYSMPPLLGALLPSLLFFGLSVYLLLHK 357 >gi|166713423|ref|ZP_02244630.1| hypothetical protein Xoryp_18790 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 368 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 121/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V +G+ +YS A VP Sbjct: 9 DWYVGRVVLSTVLLTWAVLLGLDLVNAFASEAKNIGQ-GSYSFGHAVAYVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ I Sbjct: 68 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAALALLTAIMVISGETIGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKS-DIIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N D S W + + + G +K+L D Sbjct: 128 WAQNQADTLKTSARYNSDMAASLYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + L++V + + + + + Sbjct: 188 YHLDSSGRMQQLTYASVAEHRDGHWTLRQVRRDTFQERSVQRETFPELPWQSLLNPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + + +++ E Q++ PL ++A+ + A S Sbjct: 248 AGLAKPRNLSAHDLEQSIEYRSRNG-LDARDYEEQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S+ + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSVWLFRRR 366 >gi|224368912|ref|YP_002603074.1| putative permease [Desulfobacterium autotrophicum HRM2] gi|223691629|gb|ACN14912.1| putative permease [Desulfobacterium autotrophicum HRM2] Length = 359 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 133/360 (36%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY+ K + + + + + +D + N+S+ +G ++P Sbjct: 1 MSILHRYWLKEFTRFFAIVQMLLLCIFLAVDYLSNMEKFL-RSNFSLIQGLGYILLKIPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q P ++ IVVF +NR +EL+ + G+S++ LL P V+ ++L + + + Sbjct: 60 MFVQFTPAGVVLATIVVFSLMNRNNELLALKGSGVSVYHLLKPVVLVGVILAMTMIFLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + K + W I + I P ++ T Sbjct: 120 TIVPYTMAKANHIRSSTLKKNKKIYAT---WENIWIRDGNKIIHINYFNPADNSISGITI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDG 236 + KI R DA+ + + +L V+E + + + ++ Sbjct: 177 TSFGADFKIATRVDAENGRFDSGQWQLSNVLEQNNPGDEHNADIQFYDHKAFALDVEPAD 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + +++ S E+ + + F+ I P++ + M L+ A + Sbjct: 237 LKTVAKKTDQMSIQELKAYIHKIENEG-YDATHYIVDFWAKIAFPIICLVMALVGAGAGM 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + +A GI F + + S G G++ P +A ++ I L+ + L+ Sbjct: 296 LSAAKENMPLGIALGIGVAFCYWVVHGFCTSLGYGGMIPPFLSAWTADLIFICLTTIFLV 355 >gi|294625210|ref|ZP_06703851.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664572|ref|ZP_06729914.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600484|gb|EFF44580.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605656|gb|EFF48965.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 368 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 120/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L V +G+ +Y+ A VP Sbjct: 9 DWYVGRVVLFTVLLTWAVLLGLDLVNAFASEAKNIGQ-GSYTFGHAVAYVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S ++ V LL V+ I Sbjct: 68 LFPTAAVIGALMGLGQLAATSELTALRALGVSRKRMSASVVAAMALLTASMVISGETIGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L + N + S W + + + G +K+L D Sbjct: 128 WAQNQADTLKASARYNSNMASSRYAGLWAREGDTFLNALSGEEKLLDGGGTALDLHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 +D ++ A +A + + L++V + + + + + Sbjct: 188 YHLDSSGRMQQLTYASVAEHRDGRWTLRQVRRDTFQERSVQRETFPELPWQSQLNPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + + ++ E Q++ PL ++A+ + A S Sbjct: 248 AGLAKPRNLSAHDLEQSIEYRRRNG-LDARDYEDQYWSRWFYPLNVLALCMAAIPFSFGS 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + L A +P ++ + +S + ++ Sbjct: 307 LRSGGLGKRLFLGILFALGFWLLQLFFGRMAGALKLDYRIAYALPPMVMLGVSAWLFRRR 366 >gi|197119769|ref|YP_002140196.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089129|gb|ACH40400.1| membrane protein, YjgP-related protein [Geobacter bemidjiensis Bem] Length = 391 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 113/362 (31%), Gaps = 4/362 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+ Y FK L ++ ++ + ++ + E S + A +P Sbjct: 5 MKKTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEK-GIPFSDVVRMVAYLLP 63 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IP L+ ++ F L+ SE+ ++ GIS++ LL P ++ + + + V Sbjct: 64 PFWLFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPMLFAACATLACLWVT 123 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWED 178 G L+ + + + I D Sbjct: 124 VYAVPWGNSGFKKLMVEIAQSSAGIAIKEKIFNNAFPGMVVYTQSLDTKAQTMGGVIVHD 183 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + +L+ ++ + +++ Sbjct: 184 ERDPRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAEEQGGYRMVQFQEYNLRVALAD 243 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ S + + + + + +++ + +P TL+A + ++ Sbjct: 244 GSNKATRKVSEMTLDELLHPPKGTQQKEIISRDLEYHSRLALPFSCFVFTLLAIPLGIQN 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + + I + Y ++ + G+ G L P+ A P ++ + + + Sbjct: 304 RRSGK-AAGFSLSIGVILLYYVTLSAFDTLGERGTLPPLLAGWSPNLIFLLAGAYLFKKT 362 Query: 359 ED 360 D Sbjct: 363 SD 364 >gi|295132762|ref|YP_003583438.1| permease [Zunongwangia profunda SM-A87] gi|294980777|gb|ADF51242.1| predicted permease [Zunongwangia profunda SM-A87] Length = 358 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 127/357 (35%), Gaps = 3/357 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T LL + + ++L E +++ E A Sbjct: 1 MKILDWYILKRYLGTFSMMLLLFIPIGITVNLAEKIDKILE-NEVPFVEVAEYYLNFTIY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + G+S ++ L P+++G+ ++ I + + Sbjct: 60 FANLLFPLFLFLSIIWFTSKLANNTEVIAFLSSGVSFYRFLRPYIIGATIVCIAALGLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A K + ++ G + + + Q+++ + + + + Sbjct: 120 FLAPKASKGFNEFKYEYLKRGHETQETKDVYRQVNDNEVIYASHFRPKTHTANNFVIEHF 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY-QYGRIPIDKNSTTLNIPIKMDGFQKF 240 K KI + + + G I ++ +P + D Sbjct: 180 EGNQLKFKISASRLKFNTEDSTYTLTNVDKRIIGENGDIMSNQAKLDTILPFEFDELTPE 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + SF E+ + + ++ + Y + IP+ +T+IA +VS R Sbjct: 240 TYIAETLSFSELNEFIKKESRRGSGNMNMYLVAAYKRVSIPVSAFILTIIAVAVS-SMKR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +A GI F+ + + + P+ A IP I L++ +LL+ Sbjct: 299 RGGMGVNLAVGISLAFIFIFFDKVFGTIAEQSTFSPLLAVWIPNISFGILAVFLLLK 355 >gi|153007032|ref|YP_001381357.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152030605|gb|ABS28373.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 358 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 122/358 (34%), Gaps = 7/358 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL+RY + + L G + + +D + L A + +++ Sbjct: 2 ILFRYAARRTFAAFVGSLAGVVAIFLAVDFVDNSASFTGPGWIPA--VLELYANKTAVVV 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q+ P ++ + RT E RA+G+ W+L P ++L G V+V + Sbjct: 60 RQVAPAAMVLGAAIAVSTFRRTREYTAMRALGLGPWRLAGPVAAVTLLAGAALVVVHDVW 119 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ G +Q + + I + T + Sbjct: 120 GVEATARAEEIRATRFSRGVRQFQQAREPKRWFRSRDGRRIYHLGASLPGGGFARVTVLA 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQK 239 + ++ R DA D L++V + + + +S P + F Sbjct: 180 VTPDFRLAGRIDAARMRPDGDAWMLEEVQDRTFLPDGSVRLERADSRRYEFPEPPEAFAV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + ++ +++ + + Y + P V L+A +++L + Sbjct: 240 VPGRPSQLRWRTLVAQIAVRRHLG-LATEEFQLERYDRVAYPFAGVPGALLAVALALRRN 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + + + + + + G SG + P AA P L ++L I + + Sbjct: 299 RKGHVSAALVESVGVSLLFWGVQGVSFALGLSGRVAPWVAAWAPNALFLALGIAAVRR 356 >gi|150005671|ref|YP_001300415.1| hypothetical protein BVU_3161 [Bacteroides vulgatus ATCC 8482] gi|212693333|ref|ZP_03301461.1| hypothetical protein BACDOR_02845 [Bacteroides dorei DSM 17855] gi|254884104|ref|ZP_05256814.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|265753721|ref|ZP_06089076.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294776587|ref|ZP_06742057.1| putative membrane protein [Bacteroides vulgatus PC510] gi|319640869|ref|ZP_07995580.1| hypothetical protein HMPREF9011_01177 [Bacteroides sp. 3_1_40A] gi|149934095|gb|ABR40793.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|212664098|gb|EEB24670.1| hypothetical protein BACDOR_02845 [Bacteroides dorei DSM 17855] gi|254836897|gb|EET17206.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|263235435|gb|EEZ20959.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|294449575|gb|EFG18105.1| putative membrane protein [Bacteroides vulgatus PC510] gi|317387506|gb|EFV68374.1| hypothetical protein HMPREF9011_01177 [Bacteroides sp. 3_1_40A] Length = 390 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 120/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T + + + + V D+NE ++ + +P Sbjct: 33 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 92 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T + Sbjct: 93 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 152 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G +D ++K ++ + S I D Sbjct: 153 VIPKGNVTRLDFEDRYKKKKKQEYVRNVQLEVDSGVIAYIERYENYNKTGYRFSLDKFDD 212 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ +K + E + R I + + I ++ F Sbjct: 213 KKLVAHLTARSVTYDTASVHKWTIKNYMIREMEGMREKITRGDRLDTIIKMEPQDFLIMK 272 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + E+ + + + + E ++Y I + +T I S+S + Sbjct: 273 GQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSLSSRKMK- 331 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F T+ +F +G P+ A IP IL ++I + Sbjct: 332 GGMGLHLGVGLALSFSYILFQTVSATFAVNGNTPPIIAVWIPNILYTFIAIYL 384 >gi|290473525|ref|YP_003466395.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] gi|289172828|emb|CBJ79599.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] Length = 358 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 132/359 (36%), Gaps = 3/359 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L+T L L + L +I + ++G+ YS + VP Sbjct: 1 MFGVLDRYIGRTILQTILMTLFTLVSLSGIIKFVDQLRKVGQ-GEYSAFAAGIYTLLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IQ P L+ ++ L SELV+ +A G + Q+ + +I L T+++ Sbjct: 60 KDIQIFFPMAALLGGLLGLGALATRSELVVMQASGFTRLQVAGSVMKTAIPLVFLTMVIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A GE+I + Q G + W + N I K + F Sbjct: 120 EWVAPQGEQIARNYRSQKMFGGSLMSTAKGMWAKDGNDFVYIKSVDKDNALRDVSIYHFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQK 239 K D ++++ Q GRI + S + + Sbjct: 180 DNKKLLSVKYAATAVYDQNNRQWKLSQVEESDLRQIGRITGSQRISAEWKSLLTPEKLGV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + +++ R + + + PL + M L+A S Sbjct: 240 VALDPDALSIRGLQQYITYLK-QGQQDAGRYQLNMWKKVFAPLSVAVMMLMALSFIFGPL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V GI +GF+ Y + I + P+ AL+P +L +S+ LL + Sbjct: 299 RSVAMGVRVIAGISTGFIFYVLNEIFGPLSLVYSMPPLLGALLPSLLFFVVSVYFLLHR 357 >gi|241761652|ref|ZP_04759739.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373960|gb|EER63493.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 364 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 124/367 (33%), Gaps = 10/367 (2%) Query: 1 MPGILW------RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVL 54 M L+ Y K ++ L + ++ +D+ ++ + + Sbjct: 1 MIKRLFASRQIAFYLSKLFVVRCFAVLAALIFILQTLDMLGESARILAVKGNGQAELFHY 60 Query: 55 AATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGI 114 R P +I + +PF L+ ++ LN+ SE++ +A GIS Q+L P + L+G Sbjct: 61 VLLRTPQLIARFLPFAVLLGVLITLSTLNQNSEIISMKAAGISAHQILMPLIASCFLIGC 120 Query: 115 FTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + + + + T + + + + I + + +N Sbjct: 121 VSFVFNDRLVTRATAKLDAWQA-VDYGQPPPAATSGVNIWLRDGDHLIHVDNVQGYGDNV 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS-TTLNIPIK 233 T + ++ AD L KV + + + +N + Sbjct: 180 RLSGITVYN-RSQKTLVSILSADTGQWTGHGWHLNKVKSFDVAADTVTEKPVLDINTDLP 238 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + F + + + + + + + + + + M ++ + Sbjct: 239 PERFTLADVKADEMEVVPLYRAIKALDAAGRPTDELKASLIH-RFTGAFAAILMPILGSV 297 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +RS + + + G+ GF + + G G P+ A+ P IL + + Sbjct: 298 AGFGLARSGRLFVRIVIGMSLGFAYFVADNFALTMGNLGTYPPLLASCSPFILFLLIGEA 357 Query: 354 ILLQKED 360 +L++ E+ Sbjct: 358 VLIRTEE 364 >gi|166367866|ref|YP_001660139.1| hypothetical protein MAE_51250 [Microcystis aeruginosa NIES-843] gi|166090239|dbj|BAG04947.1| hypothetical protein MAE_51250 [Microcystis aeruginosa NIES-843] Length = 389 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 119/369 (32%), Gaps = 17/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY F L L+ + L I + + + ++P I Sbjct: 18 ILDRYIFVELLLPFLFGMGLFTSLGVAIGTLFDLVRRITESGLPFTLALKILLLKMPEFI 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L SEL+ ++IGIS+++L+ P +V S+++ T + + + Sbjct: 78 VLAFPMSILLAALMAYSRLASDSELIALKSIGISVYRLIIPAIVLSLIVTGLTYVFNDYV 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS----------NPQQDIFIGAKKILPEN 173 A + + + K + + + Sbjct: 138 APAASYEANATMTKALRPNRKSFIEDNIIYPEYGKVRQPDGGEPQTVLRRLFYAERFNGQ 197 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTL 228 + + I ++ I + Y R + L Sbjct: 198 EMLGLTILDRTQPEVNQIITSESASWNIEKNIWDFYNGTIYLIDPKGSYRNIVRFQHQQL 257 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAM 287 +P + + + + + + S R + Q I +P + + Sbjct: 258 ALPRTPLDLAFRARDGSEMTLRQAREYLEILQLSGNPTKIRKLQVQIEQKISLPFVCLVF 317 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 +I A++ L ++ I F Y + + S G G+L P+ AA +P IL Sbjct: 318 GMIGAALGLRPQ-NSNKATSFGICIVLIFSYYLLSFVTSSLGIGGVLTPLMAAWLPNILG 376 Query: 348 ISLSILILL 356 ++ ++LL Sbjct: 377 LTAGGILLL 385 >gi|159028498|emb|CAO87305.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 389 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 118/369 (31%), Gaps = 17/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY F L L+ + L I + + + ++P I Sbjct: 18 ILDRYIFVELLLPFLFGMGLFTSLGVAIGTLFDLVRRITESGLPFTLALKILLLKMPEFI 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L SEL+ ++IGIS+++L+ P +V S+++ T + + + Sbjct: 78 VLAFPMSILLAALMAYSRLASDSELIAFKSIGISVYRLIIPAIVLSLIVTGLTYIFNDYV 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD----------IFIGAKKILPEN 173 A + + + K + + + + Sbjct: 138 APAASYEANATMTKALRPNRKSFIEDNIIYPEYGKVRPPDGGEAQTVLRRLFYAERFNGQ 197 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-----STTL 228 + + I + I + Y +N L Sbjct: 198 EMLGLTILDRTQPEVNQIITSETASWNIEKNIWDFYNGTIYLIDPNGSYRNIVRFQHQQL 257 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAM 287 +P + + + + + S R + Q I +P + + Sbjct: 258 ALPRTPLDLAFRGRDGSEMTLRQAREYLEILQLSGNPTKTRKLQVQIEQKISLPFVCLVF 317 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 +I A++ L ++ I F Y + + S G G+L P+ AA +P IL Sbjct: 318 GMIGAALGLRPQ-NSNKATSFGICIVLIFSYYLLSFVTSSLGIGGVLTPLMAAWLPNILG 376 Query: 348 ISLSILILL 356 ++ ++LL Sbjct: 377 LTAGGILLL 385 >gi|120553895|ref|YP_958246.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] gi|120323744|gb|ABM18059.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] Length = 353 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 118/360 (32%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I Y + ++ + L + Y + A +P Sbjct: 1 MHKI-DGYVMRTVGGAMFLVMVVVLSLDVIFAFIAELED--TRNEYQTLQALWYVALTLP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I +P + +V ++ +SEL + RA G+S+ +++ + ++++ + V + Sbjct: 58 RRIYDYLPLGAFMGCLVGLGSMASSSELTVIRAAGVSLKRIVWSAMKPALIVVLLGVAIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + E+I G S W + N + + N + + Sbjct: 118 EYVAPTTERIAQSDKAVALGAGSSVASAEGVWHREGNTFMHL-----NAVQPNGVLHGVS 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGF 237 D ++ A+ AI D L+ V + ++ S + Sbjct: 173 LFRFDDARQLQVASFAERAIYQGDYWLLENVTSTRIEPERTVRDVSASLRWETGLSPSVL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S + ++ + + F+ ++PL M L+A S Sbjct: 233 SVLIVKPENLSMTGLYTYAAYLGEQG-LSAAQYWLAFWKKALMPLGTAVMVLVAISFVFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ G + + ++ P+ A L P+++ + +++ + Sbjct: 292 PLRSVTMGFRVFTGLLVGLLFKYMQDLLGPMSMVYGFNPLIAVLAPIVVNGIVGAVLMRR 351 >gi|237723640|ref|ZP_04554121.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229437988|gb|EEO48065.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 390 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 119/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T + + + + V D+NE ++ + +P Sbjct: 33 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 92 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T + Sbjct: 93 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 152 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G +D ++K ++ + S I D Sbjct: 153 VIPKGNVTRLDFEDRYKKKKKQEYVRNVQLEVDSGVIAYIERYENYNKTGYRFSLDKFDD 212 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D ++ +K + E + R I + + I ++ F Sbjct: 213 KKLVAHLTARSVTYDTVSVHKWTIKNYMIREMEGMREKITRGDRLDTIIKMEPQDFLIMK 272 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + E+ + + + + E ++Y I + +T I S+S + Sbjct: 273 GQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSLSSRKMK- 331 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F T+ +F +G P+ A IP IL ++I + Sbjct: 332 GGMGLHLGVGLALSFSYILFQTVSATFAVNGNTPPIIAVWIPNILYTFIAIYL 384 >gi|254481253|ref|ZP_05094498.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] gi|214038416|gb|EEB79078.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] Length = 353 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 122/357 (34%), Gaps = 6/357 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L R+ L L + L + + + + + Y+ + + +P Sbjct: 1 MRK-LDRHVGWTVFVAILLVLAIIVGLDAIAAFIDEADDISKT--YTFGQVGLYILLTLP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + IPF L+ ++ L +SELV+ RA G+S +L+ + ++L+ I + Sbjct: 58 GRLYEFIPFAALIGCMLGLGQLATSSELVVMRAAGVSTGRLVWVAMKPALLIAIMGFSLG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E++ ++ G+ W + N + +F Sbjct: 118 EFVAPETEQMAETQRALAQNPGESFGGRYGIWNREGNTFLHFNAVEAGGVVHGITMLEFD 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + R + + L +Q + I + Sbjct: 178 EDLLMEYSLRARRASFEGGYWTMEDAVLTNFSSWQ--TTRETHEVMRWDTGITPELLTVM 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + ++ + + + + + I+ P + A+ L+A S R Sbjct: 236 AVEPEYLPISDLYRFSRYLQSQG-LDSDDYQLALWGKILQPAAIGALVLVAISFIFGPLR 294 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ G + T ++ P+ AAL+P++L + +L+LL+ Sbjct: 295 EGTMGFRIFAGVIVGIVFRTSQDLLGPASLVFGFAPIYAALVPILLCGAAGMLLLLR 351 >gi|258544322|ref|ZP_05704556.1| membrane protein [Cardiobacterium hominis ATCC 15826] gi|258520402|gb|EEV89261.1| membrane protein [Cardiobacterium hominis ATCC 15826] Length = 350 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 129/356 (36%), Gaps = 11/356 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY + L T+L L + + +++ ++ + +G+ NY+++ + +P + Sbjct: 4 FDRYLLRTILATSLIALAFLLAVDYIVQISVDADDLGQ-GNYTLAILLLQLLLVLPEKLL 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P L+ I+ L +E+ + RA GIS +L + ++++G+ ++ +A Sbjct: 63 LYTPAAVLIGTIMGLGQLAAQNEIAVVRAAGISRLRLARAGIAFALIVGVLNIVNGETLA 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L Q + W++ N I + Sbjct: 123 PQLADRSRLLRNQALGQSSDPGREQGIWLKQQNTHIHIGALNPD-------GSLARIRSY 175 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK--NSTTLNIPIKMDGFQKFSE 242 I +AD A +L+ ++ ++ + S Sbjct: 176 YSDADSITISEADRATWQAPDWQLENPRAWRTRADKTERLTAPESWQNGATPQALHALSA 235 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 ++ + E+ F + ++ + + + ++ PL AM L+A + +RS Sbjct: 236 VKSAETLRELYTLTRFMAANG-LNHQQQSLKLWQRLLTPLTTAAMVLLALPFTFGNARSG 294 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 Q + GI G Y I ++ + P+ A +P+++ +++L+++ Sbjct: 295 QQGTRLVTGILLGVAYYVISGVIANLALLLHWPPLLGAALPILIFTLPPLILLMRQ 350 >gi|282897128|ref|ZP_06305130.1| permease YjgP/YjgQ [Raphidiopsis brookii D9] gi|281197780|gb|EFA72674.1| permease YjgP/YjgQ [Raphidiopsis brookii D9] Length = 391 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 131/372 (35%), Gaps = 17/372 (4%) Query: 1 MP-GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 MP I+ RY L L+ + +V ID + I+ + ++ Sbjct: 16 MPFSIMDRYLAMQLLPIFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFVLKL 75 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P ++ P TL+ ++ + L+ SEL+ R G+S+++++ V+ S L+ T + Sbjct: 76 PYVMVYSFPMSTLLATLMTYSKLSSDSELIALRGCGVSVYRMVLTAVLLSGLVTGMTYVF 135 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 I+ + ++Q + + ++ G ++L ++F Sbjct: 136 NEYISPAANYEASITLEQALKSDQPSFKQENIYYPEYREEKTKDGGTSRLLARLFYADEF 195 Query: 180 TSITIDKKNKIIH---------RKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNS 225 + I ++ Y Y + R + Sbjct: 196 DGKKMKGLTIIDRSKAGVNQIVVSESAQWNAYKQVWDFYNGTIYLVAPDRSYRNILRFEH 255 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLML 284 L +P K S + + + ++++ + + E + I P + Sbjct: 256 QQLKLPSTPLIVAKNSRDYEEMNIAQSLQQLEIEKLAGNPQRIKKLEVRIQQKIAFPFIC 315 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + L+ +++ R+ + I F+ Y ++++ + ++ IL P A +P Sbjct: 316 IIFGLVGSAMGTIPQRTGR-GRSFGVSIIVIFIYYLLLSVCGALAQAEILSPFVGAWLPN 374 Query: 345 ILTISLSILILL 356 + + + I+IL+ Sbjct: 375 LCGLGMGIVILM 386 >gi|33865647|ref|NP_897206.1| permease [Synechococcus sp. WH 8102] gi|33632817|emb|CAE07628.1| possible permease [Synechococcus sp. WH 8102] Length = 385 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 110/367 (29%), Gaps = 15/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ L L+ + ++ I + + + +P + Sbjct: 14 LLDRWLVGEILAPLLFAVAAFTVVGLSIGVMFELVRRLVEDGLPAWTALQVMLLSLPRFL 73 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL ++ + L SEL R++G+S +L+ P +V S LL T+L + I Sbjct: 74 VLSFPMATLFATLLAYSKLTANSELTALRSVGVSTVRLVVPALVLSALLTGMTLLFNDVI 133 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ----------ISNPQQDIFIGAKKILPEN 173 +Q+ + + + + + + Sbjct: 134 VPQANTQAEVTLQKALGRALATEKGKDIIYSRFGRVREPGSERSGRGLKQLFYSRRFDKG 193 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLN 229 + + + + + L K + + +D + Sbjct: 194 EMVDVTVLDFSRAGFRQMLVAERALWNEGEAKWEFRDGQILTLNLNGSTTRVDFDRYLYP 253 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 + + + + + E I+ ++ R + + P+ V Sbjct: 254 LSSGPLKVARLPDDANNMTIAEAIEAERVEAEAGNLKAARKLQVRIQEKFTFPMACVVFG 313 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI +S+ I Y + S G G+L + AA +PV++++ Sbjct: 314 LIGSSLGSRPGSRTSRSQGFGISILLILGYYALSFSFSSLGVKGVLPALLAAWLPVLISL 373 Query: 349 SLSILIL 355 L+L Sbjct: 374 GAGTLLL 380 >gi|224024955|ref|ZP_03643321.1| hypothetical protein BACCOPRO_01686 [Bacteroides coprophilus DSM 18228] gi|224018191|gb|EEF76189.1| hypothetical protein BACCOPRO_01686 [Bacteroides coprophilus DSM 18228] Length = 369 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 121/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L +Y +L T + + + + V D+NE + + +P Sbjct: 12 KRLDKYIIIKFLGTYFFAIALIISIAVVFDINENIDDFINNKAPLKAIVFDYYLNFIPYY 71 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +L+ P+++ + ++ + T ++ Sbjct: 72 TNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAGIIALVTYILSTE 131 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + +G + Q +K+ I S + D Sbjct: 132 VIPTGSVTRLKFEQVYKNKKKVDYVRNIQLEVDSGVIAYMERYEDYNRTGYRFSLDKFED 191 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D A ++ ++ + E + R I + + I ++ F Sbjct: 192 HKLVSHLTARRVTYDTATVHKWIIRDYMIREMKGMRETITRGDRMDSIINMEPQDFLITR 251 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + ++ + + K + E ++Y I +T+I S+S R Sbjct: 252 GQQETMTSPQLREYIDKQKKRGFANIKIFEVEYYKRIATSFAAFILTVIGLSLS-SQKRK 310 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + GI F TI +F +G + P A IP IL + ++I + Sbjct: 311 GGMGLHLGIGIGLSFSYILFQTISSTFAINGNVPPNLAVWIPNILYLFIAIYL 363 >gi|119486322|ref|ZP_01620381.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] gi|119456535|gb|EAW37665.1| hypothetical protein L8106_16749 [Lyngbya sp. PCC 8106] Length = 392 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 113/370 (30%), Gaps = 17/370 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L+ + + ID + + + ++P + Sbjct: 21 ILDRYIISELIAPFLFGVGLFTSVALSIDTVFDLVRKVAESGLDVGIAMQIFLLKMPEFV 80 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P ++ ++V+ ++ SE+V R+ GISI++L+ P ++ S+ + + I Sbjct: 81 VLSFPMSMVLTTLIVYGRMSSDSEIVALRSCGISIYRLVIPTLIFSLFITASMFVFNELI 140 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ---------------QDIFIGAKK 168 + ++Q + + K Sbjct: 141 VPATNYRASITLEQALHQDRLPVQEENIFYPEYRTIPIEDSDEEITILVRLFYAQEFDGK 200 Query: 169 ILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL 228 + E I + + + + + R I + L Sbjct: 201 YMNEVTILDKSQQGITQIISSESAVWNGKQQSWDFFDGTVYMIDPKGSYRNIIRFDHKEL 260 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN-YRAETQFYFLIVIPLMLVAM 287 +P ++ + + + + S + + + +P + V Sbjct: 261 KLPRVPLDLASRKRRYDEMNIVQAHEYLELMKSSGNEKIVQKTKVRIQQKYSLPFVCVVF 320 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 L+ A++ + R+ I F Y + I + G+ I+ P A +P+++ Sbjct: 321 GLLGAALGSQHQRT-NRSTSFGISIVIIFSYYMLAFITGAMGQKAIISPFLAGWLPIVIG 379 Query: 348 ISLSILILLQ 357 + S L + Sbjct: 380 LGASGFFLYK 389 >gi|152981500|ref|YP_001354149.1| hypothetical protein mma_2459 [Janthinobacterium sp. Marseille] gi|151281577|gb|ABR89987.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 382 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 52/382 (13%), Positives = 117/382 (30%), Gaps = 26/382 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +YF ++ L+ L+ + L DL +G Y I + +P Sbjct: 1 MKILQKYFSLEIGRSVLFVLIAFLALFAFFDLVGELKSVGH-GGYKIQHAFLYVVLEMPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I SE I RA +S + + ++ + T + Sbjct: 60 YVYELMPIAALIGTIWALSQFAARSEFTIMRASSMSTAMVGAILLKIGVVFALITFVFGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ--------DIFIGAKKILPEN 173 + + + + Q+ W + F+ +++ P+ Sbjct: 120 FVVPITSNMAERIRVNSQGGALSQEFRSGLWTKDVIRSNGQEGEVLGSRFVNVRELRPDG 179 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----------------G 217 + + + L + Sbjct: 180 KLMNLKIYEFNRNFHLTSLITAGSADYAGANTWTLNDGTVAAFGESKLQGATTATDITTA 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + + A+ S ++ + +++N R E + Sbjct: 240 ISTSKFKTQSLVSEMTPEILSVGFTDPATMSAIALVNYTQYLSENNR-DTVRYEIALWKK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 +V P + M +A + RS + + GI G I ++ G P Sbjct: 299 VVYPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPF 358 Query: 338 AAALIPVILTISLSILILLQKE 359 A A++P +L +++++ L+ E Sbjct: 359 ATAILPSLLFLTVAVGALMWVE 380 >gi|153209377|ref|ZP_01947372.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|165919052|ref|ZP_02219138.1| putative permease [Coxiella burnetii RSA 334] gi|212218294|ref|YP_002305081.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] gi|120575377|gb|EAX32001.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|165917247|gb|EDR35851.1| putative permease [Coxiella burnetii RSA 334] gi|212012556|gb|ACJ19936.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] Length = 355 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 129/360 (35%), Gaps = 11/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L RY + T +L + + ++ +Q+G + +Y + + + T++P Sbjct: 1 MP-LLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSV-HYGLGQAFLYVLTQLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + Q+ P + ++ L +SEL++ R G+SI + V ++L+ + + Sbjct: 59 SDLYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVAMTFIG 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA G + K+ W+ + I + + + + Sbjct: 119 EVIAPQLGASGEETKLTALSKAVGYKALGDVWLHGAQSFIHI-----GSVDAKNKISEVS 173 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 I+ K++++ A L V + Q+ + L I D Sbjct: 174 QFFINNKHQLLSAVYAPKGEYVKGHWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHL 233 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 Q+ + +S + + + ++ R F+ + PL V M + Sbjct: 234 QQGRKMVDRQSIVGLYHTIRYRQQAG-LQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG 292 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + GI GF Y + F + P+ AAL+P +L +++L Sbjct: 293 SLRQASMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRY 352 >gi|261492351|ref|ZP_05988913.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496137|ref|ZP_05992545.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308239|gb|EEY09534.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312034|gb|EEY13175.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 365 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 128/362 (35%), Gaps = 5/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K L L + L +I E +G +Y + A +P Sbjct: 6 MNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDVG-RGSYDGLKAAYYTFLTIPR 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ NL SELV+ +A G S +++ + ++ L +FT+++ Sbjct: 65 DIETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTALPLVLFTMIIGE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + G + W + N I + +N + F Sbjct: 125 WGVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGNSFIYINHIKNEKSLDNVLIYQFGE 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 ++ + + + K++K + + + Sbjct: 185 GQNKRELQSVLKAGTANYSDEKGWVLSKVEKSTVGENQIQQAKQPDQVWQTSLTPSKLGI 244 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + S S + + F + R E F+ + P+ + M L+A S Sbjct: 245 VSLKPESLSISGLADYVGFLKDTGQ-DPKRFEITFWRKVFQPISMAVMMLLAISFIFGPL 303 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQK 358 RS+ + GI +GFM Y + + L ALIP +L + + +L +K Sbjct: 304 RSSTMGAKIVIGIVAGFMFYVANIVFGNLSLIATWLPVPVGALIPSLLCLIIVWWLLSKK 363 Query: 359 ED 360 D Sbjct: 364 RD 365 >gi|254446939|ref|ZP_05060406.1| permease YjgP/YjgQ [gamma proteobacterium HTCC5015] gi|198263078|gb|EDY87356.1| permease YjgP/YjgQ [gamma proteobacterium HTCC5015] Length = 347 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 122/354 (34%), Gaps = 11/354 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + L T LL + L + +YS RVP + +P Sbjct: 1 MARAILAATALVLLVILFLDAFFGFLGEGKYVARYADYSYWHAIGYVMLRVPGKAMEFMP 60 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 ITL+ ++ L SEL RA G+S +++ + +++ + L+ +A + Sbjct: 61 AITLIGALLGLGTLASNSELTAMRAAGLSKGRIVWGGMKTGLIIALAVALLGEYVAPQSD 120 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 Q + + K L I++ ++ Sbjct: 121 LKAAAFRAQAQGRAITSELRDFWLKNGDEFVYIKRAEPDKRLRGVRIFQ-------VQEG 173 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQKFSEQFA 245 ++ A A +L +V EY++ + + T + + +D F+ Sbjct: 174 ELKRLLKAASAQHTASGWRLNQVREYRFEDDAVSRKVIGQMTKSQLVDVDLFEVAQLSPE 233 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + E+ +++ + N F+ + PL ++ M L+A RS Sbjct: 234 NMRLLELDNYIAYLDD-NRLEATLYRKAFWKKVTAPLSILVMLLLAMPFIFANRRSGNAG 292 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + GI G Y I +++++ G+ + + A P++ +L +L + E Sbjct: 293 ARLVIGILFGMSYYIISSLIENLGQVYGVPVLLGAFTPIVAFTALGFWLLKRSE 346 >gi|94495767|ref|ZP_01302347.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425155|gb|EAT10176.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 366 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 121/357 (33%), Gaps = 2/357 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + Y + +L T L ++++ +DL + P S ++ R P II Sbjct: 11 ISLYMARLFLTRTFAVLAMLVVVLQTLDLLGNSGDILAYPGNSDAQLWHYVGLRAPQIIA 70 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +PF L+ +V+ LN+ SE++ +A G+S Q+L P V+ ++ + I + + I Sbjct: 71 TFLPFSVLLGTLVMLATLNQNSEIISMKAAGLSAHQILAPLVLAALGVSIISFVFNERIV 130 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + I Sbjct: 131 VRSTAALSAWEAVDYGPVPPDSGVKSNPWVRDGNNLVNAAIVAGRGTAVQLRQVEIYNRI 190 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR-IPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + I + + + L+ ++ R + + I+ D F Sbjct: 191 NNRLTTIVQAPKGHYDVASKSWVLEGARQFDVARGTVSNIGTVRFGRDIRPDQFTLARVD 250 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + +F+E+ + + E + + PL + M ++ + + +RS Q Sbjct: 251 PDALTFHELEAAIGDLRDAGRP-TKELEGSLWHKLSGPLSALLMPILGSVAAFGLARSGQ 309 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G+ GF + + G G PV AA P L + + +L + E+ Sbjct: 310 LFMRAVLGMALGFAYFVADNFSLAMGNLGAYPPVLAAWAPFFLFLLVGETVLFRTEE 366 >gi|237710072|ref|ZP_04540553.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229456165|gb|EEO61886.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 365 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 120/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T + + + + V D+NE ++ + +P Sbjct: 8 KRLDIYIIKKFLGTYFFAIALIISIAVVFDVNENIDRFINNKAPLKAIVFDYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIISVVTFGLGAY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G +D ++K ++ + S I D Sbjct: 128 VIPKGNVTRLDFEDRYKKKKKQEYVRNVQLEVDSGVIAYIERYENYNKTGYRFSLDKFDD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ +K + E + R I + + I ++ F Sbjct: 188 KKLVAHLTARSVTYDTASVHKWTIKNYMIREMEGMREKITRGDRLDTIIKMEPQDFLIMK 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + E+ + + + + E ++Y I + +T I S+S + Sbjct: 248 GQQQTMTSPELKEYIDKQKRRGFANIKEFEIEYYQRIAMSFAAFILTTIGVSLSSRKMK- 306 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F T+ +F +G P+ A IP IL ++I + Sbjct: 307 GGMGLHLGVGLALSFSYILFQTVSATFAVNGNTPPIIAVWIPNILYTFIAIYL 359 >gi|22297556|ref|NP_680803.1| hypothetical protein tlr0012 [Thermosynechococcus elongatus BP-1] gi|22293733|dbj|BAC07565.1| tlr0012 [Thermosynechococcus elongatus BP-1] Length = 379 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 114/359 (31%), Gaps = 9/359 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + ++ ++ + VI + + + + R+P Sbjct: 19 LLDRYILREMIRPFVFGFGIFTAIAAVIGTVFYLIRNMVEHHLGLLSAIQVFFLRLPTFA 78 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L ++ + L+R SEL+ ++ G+S +L+ P ++ + T + + Sbjct: 79 VLGIPMAMLFGALLSYSQLSRRSELIACKSCGVSPVRLVRPALLAGFCALLCTFALNELV 138 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A I ++ + + + + ++ Sbjct: 139 APPLAYRAIKTLEVAIHRPQPTFQTRNIFYRRFGDGHLRQLFF--AHRFDGKVMGQVTVL 196 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDGFQ 238 ++ ++ A A ++ + + P Sbjct: 197 NFEQGELREIITAQEAQWQGSAWLFRQGTYHHLRGDRDYDVAEIFSERRFAYPRTPLDLA 256 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + EI + + +S R Q + +P + ++ +I A + + Sbjct: 257 METRVPEFMTSREIYRYLQILAESGDAKRLRQWRVQLQEKLSLPFLCLSFAVIGAVLGIS 316 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R Q + F Y I +FG+ G + P+ A+ +P + ++++ +L Sbjct: 317 SPRQGQ-GRAFGLSVAIIFGYYVAAFIFTAFGEGGAVHPIVASWLPKGIVSAIALGMLY 374 >gi|198274616|ref|ZP_03207148.1| hypothetical protein BACPLE_00768 [Bacteroides plebeius DSM 17135] gi|198272063|gb|EDY96332.1| hypothetical protein BACPLE_00768 [Bacteroides plebeius DSM 17135] Length = 391 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 118/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L RY +L T + + + + V D+NE + + +P Sbjct: 34 KRLDRYIIVKFLGTYFFAIALIISIAVVFDINENIDDFINNKAPISAIIFDYYLNFIPYY 93 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +L+ P+++ + ++ + T ++ Sbjct: 94 TNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAAIIALVTYVLSTE 153 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + +G + Q +K+ I + + D Sbjct: 154 VIPTGSVTRLKFEQVYKNKKRADYVRNIQLEVDTGVIAYMERYEDYNKTAYRFSLDKFED 213 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFS 241 + R D ++ +K + E + R I + I ++ F Sbjct: 214 HKLVSHLTARRITYDTTTVHRWIIKDYMIREMKGMRETITRGGRMDSIINMEPQDFLITR 273 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + ++ + + + + E ++Y I +T+I S+S R Sbjct: 274 GQQETMTSPQLREYIDKQKQRGFANIKVFEVEYYRRIATSFAAFILTVIGLSLS-SQKRK 332 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + GI F TI +F +G P A IP IL + ++I + Sbjct: 333 GGMGLHLGIGIGLSFSYILFQTISSTFAINGNAHPNLAVWIPNILYLFIAIYL 385 >gi|319788013|ref|YP_004147488.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] gi|317466525|gb|ADV28257.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] Length = 366 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 125/361 (34%), Gaps = 8/361 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L + L + L V+ L+ +G+ +Y + A VP Sbjct: 9 DLYIGRVVLASVLLTWAVLVGLDVVLALSGQLGDLGK-GSYDFPTALAVVAYSVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 I P+ ++ +++ L TSEL RA+G+S +L +LL V+ +A Sbjct: 68 IFPYAAVIGSLLGLGQLAGTSELTALRALGLSRRRLSISVAAALVLLTGLMVVTGETLAP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW--EDFTSIT 183 G++ L K+N W + + + G +++ + D Sbjct: 128 WGQRQADQLKLAAKNNNVAMARYSGLWAREGDTFLNAIDGQERVEGGQRVLELRDVRLYE 187 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQKF 240 + ++ ++ A L + + +L+ V + + + + + + Sbjct: 188 VGEEGEVRSLTRAGLVVHDANGWQLRDVRRVAFTGAGAVEETAEEQKWDSELDANALAAG 247 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S ++ + + ++ E ++ PL ++A+ L A + R Sbjct: 248 VTRPRNLSASDLQASIEYRRRNG-LDARDYEDTYWSRWFYPLNVLALCLAAVPFAFGSLR 306 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 S + GI + + A +P +L ++ S L +++ Sbjct: 307 SGGMGKRLFLGIVFALGFMLLQMQFGRLAGAFRFDYRIAYALPPVLMLATS-WFLFRRKS 365 Query: 361 G 361 G Sbjct: 366 G 366 >gi|87124323|ref|ZP_01080172.1| possible permease [Synechococcus sp. RS9917] gi|86167895|gb|EAQ69153.1| possible permease [Synechococcus sp. RS9917] Length = 388 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 46/369 (12%), Positives = 110/369 (29%), Gaps = 15/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ + L+ + ++ + + + + + R+P + Sbjct: 18 LLDRWLLGELIGPLLFAIAAFTVVSLSVGVMFELVRRIVESGLPVGIAVQVLLLRLPSFL 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SEL R++GIS +++ P + ++++ T + + I Sbjct: 78 VISFPMATLMATLLAYSRLSANSELTALRSVGISATRMIAPALALALVMTGLTFVFNDVI 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS---------NPQQDIFIGAKKILPENH 174 +Q+ + + + K E Sbjct: 138 VPRTSLSAEITLQRALGRSVSTEKGNNIIYSRFGRLVAGDGESETGLAQLFYAKKFNEGV 197 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNI 230 + + D K + D + + Sbjct: 198 MSGVTVLDFSRLGFTQMLVADEARWNERESKWEFLDGQILTLSPSGSVTSADFDRYLYPL 257 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSN-IFHNYRAETQFYFLIVIPLMLVAMTL 289 K + + + E I+ +++ R + +P+ + L Sbjct: 258 SAAPIRIAKLPKDANNMTVAEAIEAERMLDEAGDRKEARRMRVRIQEKFTLPMACLVFGL 317 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 I +S+ + + + + Y + S G G L PV AA PV++ Sbjct: 318 IGSSLGAKPNGRTSRSQGFGISVVLILVYYVLSFSFSSLGVKGTLPPVVAAWAPVLI-SL 376 Query: 350 LSILILLQK 358 +LL++ Sbjct: 377 AGGGLLLRQ 385 >gi|154707760|ref|YP_001424260.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] gi|154357046|gb|ABS78508.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] Length = 355 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 63/360 (17%), Positives = 130/360 (36%), Gaps = 11/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L RY + T +L + + ++ +Q+G L +Y + + + T++P Sbjct: 1 MP-LLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIG-LVHYGLGQAFLYVLTQLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + Q+ P + ++ L +SEL++ R G+SI + V ++L+ + + Sbjct: 59 SDLYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVAMTFIG 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA E G + K+ W+ + I + + + + Sbjct: 119 EVIAPQIEASGEETKLTALSKAVGYKALGDVWLHGAQSFIHI-----GSVDAKNKISEVS 173 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 I+ K++++ A L V + Q+ + L I D Sbjct: 174 QFFINNKHQLLSAVYAPKGEYVKGHWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHL 233 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 Q+ + +S + + + ++ R F+ + PL V M + Sbjct: 234 QQGRKMVDRQSIVGLYHTIRYRQQAG-LQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG 292 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + GI GF Y + F + P+ AAL+P +L +++L Sbjct: 293 SLRQASMGLRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRY 352 >gi|224825294|ref|ZP_03698399.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] gi|224602215|gb|EEG08393.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] Length = 358 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 120/358 (33%), Gaps = 2/358 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +++RY TLY L + L D+ + +G +Y + + + A +P Sbjct: 1 MKLIYRYITTQLTVATLYALAALLALYAFFDIIKEVPDLGH-GSYGVPQMLLYIALLMPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P + L+ +V L +SE I R G+++ Q+ + I + T L+ Sbjct: 60 HAYELMPLVVLIGGMVAMTQLATSSEYTIIRTSGVTLAQVAGVLLRFGIGFAVITGLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A EK + + Q+ W++ ++ + Sbjct: 120 FGAPFSEKQAERMKLSATKSMVTQEFHSGIWVKDDQNFINVGEMLPDNTLLGVRIYTYDK 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + R K+K+ N+ + I+ Sbjct: 180 DYRLVQTRFAERGTYQRPQHVWRLEKVKETTLGDKATTTRQLNTLDWHSVIEPSILDVLL 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S ++ + SN R E + PL ++M L+A + + R Sbjct: 240 VVPEQMSAMDLTTYIEHLR-SNEQKTQRYEIALWSKFFYPLACISMALVALAFTPRQRRH 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 Q I + GI G + + + G + AA +P +L + I I +++E Sbjct: 299 AQLGIRLFVGICLGVAFHFVNRLFAHLGLLYDWNAMFAATLPTLLFLLAGITITVRQE 356 >gi|78222463|ref|YP_384210.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] gi|78193718|gb|ABB31485.1| permease YjgP/YjgQ [Geobacter metallireducens GS-15] Length = 418 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 114/359 (31%), Gaps = 6/359 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL+RY FK + + ++ + L ++ + L +P Sbjct: 30 MTSILFRYIFKETAVPFVLGMAVFTFVLLMGRLLKLAEMVFAK-GVPFLDVCRLILYMLP 88 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IP L+ ++ F L+ SE+ +A G+ + LL P ++L + T + Sbjct: 89 SFLLVAIPMAFLLAVLLSFGRLSADSEVTAMKAGGVGLGSLLTPVFTFAVLAYLVTTFIT 148 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWED 178 G + + ++ ++ + + + D Sbjct: 149 VFALPWGNTSFKRFLYEVIESRAATTIKEKVFIDDFPGLVVYIDDYDQTSHQISGILIHD 208 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + A N ++ L ++ + + + +D Q Sbjct: 209 ERNPDEPMTIFASTGIIAAAPEEKNVRLHLVNGSIHRGIDPGGYRLVEFRSYDLHVDLRQ 268 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAE--TQFYFLIVIPLMLVAMTLIAASVSL 296 + + + ++ +R + + + +P + ++ + + Sbjct: 269 NAKKNQFDEQDMTLKQLIASRGNRQNNEKFRRDVSIELHKRFALPFACIVFAMVGVPLGI 328 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + RS + + GI + Y +++ K+ + IL A +P + + + +L Sbjct: 329 QNQRSGRAG-GFSAGIIILMLYYVVMSAGKTIAEKEILPIPLAVWLPNVFFTAFGVYLL 386 >gi|240014488|ref|ZP_04721401.1| hypothetical protein NgonD_07558 [Neisseria gonorrhoeae DGI18] gi|240121010|ref|ZP_04733972.1| hypothetical protein NgonPI_04426 [Neisseria gonorrhoeae PID24-1] Length = 356 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 129/361 (35%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVCALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ + L SEL + +A G+S +LL + I V + Sbjct: 60 RAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ + + +++ I + +LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAINGKISTDHTG-----LWLKEKNSIINVRGMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G I+ + T I ++ + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|255038424|ref|YP_003089045.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] gi|254951180|gb|ACT95880.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] Length = 360 Score = 129 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 1/353 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K +L T ++ ++++ +ID E + + +P Sbjct: 3 FKILDRYLIKNFLITYVFVAFVIVLIICMIDYTEKVDDFLDKKAPLREIIIDYYLNLIPY 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I I P + + + + +E++ + GIS ++L P++ G+++LGI T + + Sbjct: 63 WINYISPLMVFIATVFFTSRIAARTEIIAMLSSGISFGRMLRPYMAGAVVLGILTFIQVG 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + KI + + N + + + N + Sbjct: 123 WVLPKANKIRNSFEKTYVKNEFYFSGHNVHITIAPDVYAYLESYNTTTQTGNKFTMETIK 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T + + + G I + F+ Sbjct: 183 GTKLLQKFYADKIVWQPKKGKWTLQNYQVRTLDSLGERLSRGTEIDTTINLSPKDFESDY 242 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 F + + E+ + + Y P ++ +T I VS SR Sbjct: 243 NLFETFTLPELNAYIDLLKSRGADGLEVYLIEKYTRFTQPFAILILTAIGVIVSARKSRR 302 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +A G F+ + K ++G + + A +P I+ ++ +L+ Sbjct: 303 G-VGWQIALGFMLAFIYILFFLLSKGVAEAGTINTLFAVWLPNIVFSAIGVLL 354 >gi|294795168|ref|ZP_06760302.1| putative membrane protein, YjgP/YjgQ family [Veillonella sp. 3_1_44] gi|294453960|gb|EFG22335.1| putative membrane protein, YjgP/YjgQ family [Veillonella sp. 3_1_44] Length = 363 Score = 129 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 130/359 (36%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K ++ L+ + + Q + +P Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLVLVMKAFVLALPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ F L+ TSE+V+ RA G+S +L P + ++++ I V Sbjct: 61 IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE 120 Query: 122 PIATSGEKIGIDL-IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +Q N Q + I ++ + AK E T Sbjct: 121 FVVPRTNNMYQTIVREQIMKNASPQTQNHIVLKTMNGNDLGTLMYAKSYNAETKKLSMIT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMD 235 + K+ ++AD A+ ++ + Y + +L I Sbjct: 181 VQQFGEGGKLQQVENADTAVWNGQYWVMQNGIIYDISAGDGVERTMKFKEQSLPIKSAPK 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + + E+ ++ + K+ + + E + Y IPL L+ A + Sbjct: 241 DIQQDQRKPEELTIKELRHQIK-AYKAAYTNANKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ RS+ I F+ Y ++T + GK G L V AALIP L I + + Sbjct: 300 LQKQRSSSSISFGIS-ILIIFIYYGVMTFAGALGKGGALPTVFAALIPDTLGIIAGLYL 357 >gi|240079726|ref|ZP_04724269.1| hypothetical protein NgonF_00194 [Neisseria gonorrhoeae FA19] gi|268595872|ref|ZP_06130039.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|293399674|ref|ZP_06643826.1| hypothetical protein NGNG_01869 [Neisseria gonorrhoeae F62] gi|268549660|gb|EEZ44679.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|291609925|gb|EFF39048.1| hypothetical protein NGNG_01869 [Neisseria gonorrhoeae F62] Length = 356 Score = 129 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 134/361 (37%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ + L SEL + +A G+S +LL + I V + Sbjct: 60 RAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ +++ I + +LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLK----EKNSIINVRGMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G I+ + T I ++ + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|59801588|ref|YP_208300.1| hypothetical protein NGO1229 [Neisseria gonorrhoeae FA 1090] gi|59718483|gb|AAW89888.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] Length = 356 Score = 129 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 133/361 (36%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ + L SEL + +A G+S +LL + I V + Sbjct: 60 RAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ NG + W++ ++ I + +LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLK----EKTSIINVRGMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G I+ + T I ++ + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|212212730|ref|YP_002303666.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] gi|212011140|gb|ACJ18521.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] Length = 355 Score = 129 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 129/360 (35%), Gaps = 11/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L RY + T +L + + ++ +Q+G + +Y + + + T++P Sbjct: 1 MP-LLNRYIRNAIITATALVMLVLLGIEMFMEFIGQLSQIGSV-HYGLGQAFLYVLTQLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + Q+ P + ++ L +SEL++ R G+SI + V ++L+ + + Sbjct: 59 SDLYQLFPMAGFLGCLIGLGRLASSSELMVMRTAGVSIAGVTWAVVKAALLMMVVMTFIG 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA E G + K+ W+ + I + + + + Sbjct: 119 EVIAPQLEASGEETKLTALSKAVGYKALGDVWLHGAQSFIHI-----GSVDAKNKISEVS 173 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 I+ K++++ A L V + Q+ + L I D Sbjct: 174 QFFINNKHQLLSAVYAPKGEYVKGHWILYNVKQTQFTPNRTTEKKIAKFPLTIVFNPDHL 233 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 Q+ + +S + + + ++ R F+ + PL V M + Sbjct: 234 QQGRKMVDRQSIVGLYHTIRYRQQAG-LQTSRYVFAFWQRFIQPLTTVVMICLGVPFIFG 292 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + GI GF Y + F + P+ AAL+P +L +++L Sbjct: 293 SLRQASMGWRILTGIVIGFAFYMLNQFFGPFAMVYQIPPIFAALMPTVLFAVGCVILLRY 352 >gi|225024724|ref|ZP_03713916.1| hypothetical protein EIKCOROL_01610 [Eikenella corrodens ATCC 23834] gi|224942519|gb|EEG23728.1| hypothetical protein EIKCOROL_01610 [Eikenella corrodens ATCC 23834] Length = 356 Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 121/361 (33%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + TLY LL ++L ++ + +G+ NY++ + R+ Sbjct: 1 MKLLTRYLIRRLGTATLYALLALVVLFSFFEVINAVDDVGD-GNYTVLTLILYVGMRLFG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P L+ + L SE + R G S+ +++ +L G+ V + Sbjct: 60 HMYTLLPLAVLIGCLAALSQLASASEWTVIRTSGASLKRIIATVASVGLLAGLLGVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E+ L W + + I +++LP+ + Sbjct: 120 WVAPYMEQRAERLR-LHAVQQTVSLGGSGLWFRQGSDN----INVREMLPDGRLLGIRIY 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + ++ + N LK+V + ++ Sbjct: 175 RYNQHAALESAWQASEGRVNGNGTWTLKQVARTHIAAERTQTEQLASVEWPSDVGVELLG 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + T ++ ++ PL+ M L+A + + + Sbjct: 235 VLLVDTDQMSARSLKMYIDHLQSNGQQTAA-YATVWWRKLLYPLICTVMALVALAFTPQS 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 SR + + GI G + + + + P AA++P + + ++ ++ Sbjct: 294 SRHGNIGVRLFLGICLGLAFHFAGLLSGYVAQLSSMPPFGAAILPGTVFAIAAAWLIRRQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|194097860|ref|YP_002000905.1| hypothetical protein NGK_0280 [Neisseria gonorrhoeae NCCP11945] gi|239998341|ref|ZP_04718265.1| hypothetical protein Ngon3_02528 [Neisseria gonorrhoeae 35/02] gi|240016934|ref|ZP_04723474.1| hypothetical protein NgonFA_07156 [Neisseria gonorrhoeae FA6140] gi|240117143|ref|ZP_04731205.1| hypothetical protein NgonPID_01565 [Neisseria gonorrhoeae PID1] gi|240127074|ref|ZP_04739735.1| hypothetical protein NgonS_00193 [Neisseria gonorrhoeae SK-93-1035] gi|268594203|ref|ZP_06128370.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268602831|ref|ZP_06136998.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268685429|ref|ZP_06152291.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|193933150|gb|ACF28974.1| Conserved hypothetical integral membrane protein [Neisseria gonorrhoeae NCCP11945] gi|268547592|gb|EEZ43010.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268586962|gb|EEZ51638.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268625713|gb|EEZ58113.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|317163630|gb|ADV07171.1| hypothetical protein NGTW08_0197 [Neisseria gonorrhoeae TCDC-NG08107] Length = 356 Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 129/361 (35%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVCALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ + L SEL + +A G+S +LL + I V + Sbjct: 60 RAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ + + +++ I + +LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAINGKISTGHTG-----LWLKEKNSIINVRGMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G I+ + T I ++ + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|92115032|ref|YP_574960.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] gi|91798122|gb|ABE60261.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] Length = 354 Score = 129 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 118/357 (33%), Gaps = 12/357 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY + L L + + L VI + +Y + R+P Sbjct: 6 FDRYIARNVLAAMLVVQVMILGLDLVISYINDLGDV--EGDYGALDVLLYLLMRLPWRFY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q P L+ ++ ++ ++EL + RA G S+ ++L + L+ I T+ + ++ Sbjct: 64 QYAPVGVLIGALIGLGSMASSNELTVMRASGRSLARILWGAMKPLGLVIIVTMAISEWVS 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ + + S+ W + + + + Sbjct: 124 PVTEQYAEAWRLEQLEGEGAILSERGGWQREGDDFYRFGTIRADDVVIDVT------RYH 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQKFS 241 +++ AD A+ + + V ++ +S + Sbjct: 178 FDGTQLVSATHADRAVWEDGSWQWVNVDTTRFEDGRTVVDSQPRQAWETSFTPAQLNRLL 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S+S ++ + S+ + F+ +++P L + L+AAS R+ Sbjct: 238 RPLESQSPSDLWRYASYLGNQG-LEATQPLLYFWQKMLLPFTLAGLMLVAASFVFGPLRT 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 V YGI G + ++ P+ A L+P + L I++L + Sbjct: 297 VAAGTRVFYGIIVGVSFKYLQDLLAPASMLFGFSPIFAVLVPTVACYVLGIVLLRRT 353 >gi|240113704|ref|ZP_04728194.1| hypothetical protein NgonM_09087 [Neisseria gonorrhoeae MS11] gi|240116445|ref|ZP_04730507.1| hypothetical protein NgonPID1_09468 [Neisseria gonorrhoeae PID18] gi|240122359|ref|ZP_04735315.1| hypothetical protein NgonP_00180 [Neisseria gonorrhoeae PID332] gi|240125093|ref|ZP_04737979.1| hypothetical protein NgonSK_02542 [Neisseria gonorrhoeae SK-92-679] gi|254494458|ref|ZP_05107629.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441667|ref|ZP_05795483.1| hypothetical protein NgonDG_11387 [Neisseria gonorrhoeae DGI2] gi|268599772|ref|ZP_06133939.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268602117|ref|ZP_06136284.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268680946|ref|ZP_06147808.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268683688|ref|ZP_06150550.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291045047|ref|ZP_06570755.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513498|gb|EEH62843.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268583903|gb|EEZ48579.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268586248|gb|EEZ50924.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268621230|gb|EEZ53630.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268623972|gb|EEZ56372.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291011050|gb|EFE03047.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 356 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 130/361 (36%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ + L SEL + +A G+S +LL + I V + Sbjct: 60 RAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLILSQFGFIFAIAAVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + ++ + + +++ I + +LP++ + Sbjct: 120 WVAPTLSQKAENIKAAAINGKISTGHTG-----LWLKEKNSIINVRGMLPDHTLLGIKIW 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 DK + + + +LK + G I+ + T I ++ + Sbjct: 175 ARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSAAAEETWPIAVRRNLMD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + ++N + ++ +V P+ M L+A + + + Sbjct: 235 VLLVKPDQMSVGELTTYIRHL-QNNSQNTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQT 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P A +P I L++ ++ ++ Sbjct: 294 TRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLAGALPTIAFALLAVWLIRKQ 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|219871562|ref|YP_002475937.1| permease [Haemophilus parasuis SH0165] gi|219691766|gb|ACL32989.1| permease, inner membrane protein yjgQ [Haemophilus parasuis SH0165] Length = 355 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 130/363 (35%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L + + L + L +I E +G +Y A +P Sbjct: 1 MNVLERYIGRTILASIMLTLFMLVGLGAIIKFVEEFRSVG-RGSYDGLHAAYYTLLTMPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ L SELV+ ++ G S +++ + +I L + T+++ Sbjct: 60 DIETFFPIAALLGSLMGLGGLASRSELVVMQSAGFSRFRIGLAVMKTAIPLMVITMIMGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + G + W + N I ++ + Sbjct: 120 WGVPQTEQYARNMRSIAQSGGSMLATQGGFWAKDGNDFIYIRQ------IQDERNLNNIL 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 I + + K A+ A L++V + + + I Sbjct: 174 IYQFENQVLKSIKQAEKATYSEQGWLLQQVDKSEIHESGITQTRETDQAWKTSITPSKLG 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F + + R E F+ + P+ + M L+A S Sbjct: 234 IVSLKPESLSISGLADYVGFLKDTGQ-DSKRFEITFWRKVFQPISMAVMMLLAISFIFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK-SGILLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GF+ Y + + L ALIP +L +S+ +L + Sbjct: 293 LRSSTMGAKIVIGILAGFVFYVANIVFGNLSLIVSWLPVPIGALIPSLLCLSVVWWLLNK 352 Query: 358 KED 360 K D Sbjct: 353 KRD 355 >gi|86607080|ref|YP_475843.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86555622|gb|ABD00580.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 116/361 (32%), Gaps = 10/361 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y K ++ + G +++ L + + + + +P I+ Sbjct: 31 LEFYLCKEMIRPFFLGVAGGTVMMLGNQLFIYADLLVKK-GAPPLTILHILLLNLPAILV 89 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P L ++ + SE+ RA GI ++L P + +L+ +L I Sbjct: 90 VTFPIAGLFATLLTLGRMGADSEITALRAAGIPYRKVLIPVLCIGLLVSGLALLTNEVIV 149 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + L D D +++ + Sbjct: 150 PETNQKVKTLNTNLILAQDALPFDSEEIVRVDDDLWFHVGSIDPKTGWMRDLLILDRKAE 209 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL--------NIPIKMDG 236 + A A L+ VV +Y + N + + Sbjct: 210 TGHLRYPQVISAQTAHQVGQAWHLQDVVIRRYDERGRTYYEGQVAEMELNIVNKLVGLVY 269 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 +K ++ + +E ++ + + R T+++ IPL L+AA + L Sbjct: 270 AEKVPQEQRAAELWEQCQRYR-AEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGL 328 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R VA I F+ Y ++++ ++ G+ + P AA +P ++ + +L Sbjct: 329 QTVRQTGRYGSVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLW 388 Query: 357 Q 357 + Sbjct: 389 R 389 >gi|218438808|ref|YP_002377137.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] gi|218171536|gb|ACK70269.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7424] Length = 434 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 52/374 (13%), Positives = 124/374 (33%), Gaps = 18/374 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVF-VIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 P ++ RY + + + + + +L+++ N++ E + + + RVP Sbjct: 62 PSLMDRYLTSQLIPPFVLSVGIFTSMGVALANLSDLSNKVFEY-DLPVIDALKILLYRVP 120 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +P L+ ++ + L+ SEL+ R+ GIS+W+ P V+ S+++ T + Sbjct: 121 EFFAYALPISVLLTTLMTYGRLSSESELIALRSCGISLWRATVPAVILSVIVSGITFVFS 180 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +++ + + + + + L E F Sbjct: 181 EGVVPETNYRATEILVKVLHEERNFWQNKDIFYPNYEEVKLANGQTFRQLKTLFYAEKFD 240 Query: 181 SITIDKKNKIIH---------RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP 231 + I D+ + Y K + Sbjct: 241 GQKMRSLTIINWLGDHLNEIVVSDSAQWNANQNIWDFFNGTVYLIDTDKSYKEAVPFKHQ 300 Query: 232 IKMDG-----FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLV 285 F + ++ ++ S N R + + + I P + + Sbjct: 301 QFPLPKEAFEFATQGRNPYEMNLFQALQYKRLLEASGDNKNVRFFDVRIHQKIAFPFVCL 360 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 ++ A++ + + ++ + + F Y + SFG G+L P+ AA +P + Sbjct: 361 VFGIMGAAIGAKPQQMSR-GTSLGLTVGIVFSYYMLNFFTGSFGMIGLLSPMMAAWLPNL 419 Query: 346 LTISLSILILLQKE 359 + + IL + E Sbjct: 420 FGVGIGGWILKKLE 433 >gi|42524172|ref|NP_969552.1| hypothetical protein Bd2760 [Bdellovibrio bacteriovorus HD100] gi|39576380|emb|CAE80545.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 359 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 127/359 (35%), Gaps = 10/359 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY ++ + LL + L +D + M + + S P II Sbjct: 4 IDRYTAWLFVGYFVGGLLVFLTLFTAVDA---MSTMVNYKDVAPSALVNYYLYSFPGIIS 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q++P L+ I+ +LN+ +ELV A G+S+ ++ P ++ ++ + + + Sbjct: 61 QLLPVACLLGVILTLTSLNKANELVALFASGMSLIRIAVPMLLLVAVISALGYMAADRVL 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 K ++ + I +I ++ K + + + T Sbjct: 121 PRATKQKNYILYYDLKKEPHRF-STIRTDRIWYRSKNSIFNIKTLNAKGDGAQGLTMYFF 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDGFQK 239 + ++ A I + L++ + + + ++ + Q Sbjct: 180 SDEWDLVQMITAAQVKIQGAQWLLEQGTVTIFNKDSSFPLTSPFKTKSIVMAEDSKDLQS 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + S E+ + + + E ++ I + M L+ S+ + Sbjct: 240 AGQTADMMSQKELEHFIDKNKAAG-LDTVAYEVDYHSKISFAFAGLVMCLLGIPFSVGRA 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + V + F Y + + G+ G L PVAAA P I+ + ++ ++L + Sbjct: 299 RSGGTMLNVGICLALVFAYYVFYSSGITLGQHGTLPPVAAAWAPNIVMLGVAFVLLKKL 357 >gi|53803847|ref|YP_114531.1| hypothetical protein MCA2101 [Methylococcus capsulatus str. Bath] gi|53757608|gb|AAU91899.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 356 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 126/362 (34%), Gaps = 12/362 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY +K + L + L+ + +GE NY + + P Sbjct: 1 MNTLNRYIGWEVIKGAAFAALVLLALLNFFTFADELRDLGE-GNYGLGSIFLYLTLTSPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++IP L+ +VV N+ ELV +A G+S +++ + I++ + +V++ Sbjct: 60 SLYELIPSGALIGGLVVLGNMANNHELVAMQAAGVSRGRIVWAVLRAGIVISLISVVISE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E+ L ++ W++ N ++ + + D Sbjct: 120 YVIPPAERAAQMLKATATRQQVASQTKYGVWIRDGNVYVNV-----REIENQERLGDIHI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR-----IPIDKNSTTLNIPIKMDG 236 I + A A KL+ + ++ I K + + D Sbjct: 175 FEISPDGRPALAMHAARASFDRGIWKLEDIGLTRFDPAGNAAIAEHKEQEDWSSVLSPDM 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F + + S ++ K M++ ++ E F+ +V PL+ +AM L+A Sbjct: 235 LDVFIVRPENLSAQDLAKYMAYQTENAQKSLA-VEQAFWGRMVNPLITLAMLLLAIPFVF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + G+ G Y ++ G + + P ++ + ++ Sbjct: 294 NARRDVSSGQRIVIGVTIGLGFYLTNRMVSHLGLVYEVNAPLTMVTPPLVVLFAALAAFR 353 Query: 357 QK 358 ++ Sbjct: 354 RR 355 >gi|322418227|ref|YP_004197450.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] gi|320124614|gb|ADW12174.1| permease YjgP/YjgQ family protein [Geobacter sp. M18] Length = 387 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 111/360 (30%), Gaps = 4/360 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+RY F L ++ ++ + ++ + E + + + +P Sbjct: 1 MKRTLYRYIFNEIPPPFLVGMVAFTFVLLMGRFLKLAEMVVEK-GVPFTDVLRMVSYLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IP L+ ++ F L+ SE+ ++ GIS++ LL P +V S+L + + V Sbjct: 60 SFWLFTIPMALLLSILLAFGRLSGDSEVTAMKSCGISLYGLLPPPLVFSLLASLACLWVT 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWED 178 G L+ + N + I D Sbjct: 120 VYAVPWGNSSFKKLMLEIARNSASVSIKEKVFNNAFPDMVIYADTLDTKAQNMEGVIVHD 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 ++ + +LK ++ + +++ + Sbjct: 180 ERDPKAPTTIFAASGALFSDPKAHSMEFQLKNGSIHRSEDGANYRMVQFQEYILRVALAE 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S I + + + + + + +P + T + + ++ Sbjct: 240 PTPKGPRKASEMTIDELVHPPQVAAAKDVLARRLELHSRLALPFSCIVFTFVGVPLGIQN 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + + I Y ++ + G+ +L P + P +L + + ++ Sbjct: 300 RRSGK-ASGFSLSIAVILCYYIALSGFDTLGEKALLPPFLSGWGPNLLFLLAGGYLFVKT 358 >gi|302037952|ref|YP_003798274.1| putative YjgP/YjgQ family permease [Candidatus Nitrospira defluvii] gi|300606016|emb|CBK42349.1| putative Permease, YjgP/YjgQ family [Candidatus Nitrospira defluvii] Length = 363 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 128/362 (35%), Gaps = 8/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL+RY + Y+K G M + VID E + + ++P Sbjct: 1 MNILFRYMLREYVKIFGMCFAGLMTIYLVIDFFEKVRRFLRY-DAHALDVLAYFVLKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I QI P L+ ++ L+R+ E+ R+ GIS++ + +PF+ +L + + Sbjct: 60 ISYQIAPLAVLMATLLTIGLLSRSHEITAMRSCGISLYWITSPFLFLGTVLALVLFAFSS 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + S +S Q + + I P + Sbjct: 120 TVIPLALAKAEQIKTTRIEKRAVPVSVKAAQPWVSLGGQTL-MNIDTIDPGGAVLRKIRL 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLNIPIKMDGF 237 + ++ +A A+ L+ + + + + L + D F Sbjct: 179 YRLSPTFELEQIAEAQRAVYSPQGWVLEDGIRRSFRQDGTVSVNSFQTEPLPLAQIPDDF 238 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + E + I+ R T +Y I P + M ++ ++SL Sbjct: 239 TTWLELDSETMTLPEIRAYVDRLHLGGTILPRLLTDYYGRIAFPCVTFIMVVVGIALSLR 298 Query: 298 FS--RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + R + + + + GF ++ ++ + G+ G L P+ A + ++ ++ +L Sbjct: 299 RTGVRGSGMAMGIGQAMAVGFFYWSTHSVAIALGRGGALAPMLAGWMANLVFLTFGFYLL 358 Query: 356 LQ 357 L+ Sbjct: 359 LK 360 >gi|254432417|ref|ZP_05046120.1| unclassified ABC-type transport system permease [Cyanobium sp. PCC 7001] gi|197626870|gb|EDY39429.1| unclassified ABC-type transport system permease [Cyanobium sp. PCC 7001] Length = 386 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 111/367 (30%), Gaps = 16/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ + ++ + + + + + + +P + Sbjct: 14 LLDRWMLGELIGPLVFGVAAFTAVSLSVGAVFELVRRVAESGLPLDVALQVLLLELPSFL 73 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SEL R++G+ W++L P VV ++ + + T + Sbjct: 74 VLSFPMATLMATLLTYSKLSGNSELTALRSVGVPTWRMLVPAVVLAVAMTMLTFGFNEAV 133 Query: 124 ATSGEKIGIDLIQ---------QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 S + + +DN K + S + I + + Sbjct: 134 VPSTLSQAEATLSRAIGRAVAGEQRDNVVYSKYGRVELPDGSTERGLTHIFYAQRFNKGV 193 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID------KNSTTL 228 + + ++++ D + + + G + + Sbjct: 194 MEDVTLLDLSRSAHRVMLTADRARWSSRDAQWEFLDGQVVGIGSSGSEAITSARFDRYLY 253 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAM 287 + + K + S + +S R + P + + Sbjct: 254 PLGNQPLKVAKLPKDANEMSIGQARTAERLLRESGDLRAARKLRVRIQEKFSFPAVCLVF 313 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 LI +S+ + F Y + S G G L P+ +A +PV++ Sbjct: 314 GLIGSSLGARPHSRRSRSQGFGLTVLLIFGYYLVAFSFSSLGVKGTLTPLLSAWMPVLIG 373 Query: 348 ISLSILI 354 + +++ Sbjct: 374 LGTGLVL 380 >gi|257058053|ref|YP_003135941.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] gi|256588219|gb|ACU99105.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] Length = 395 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 112/367 (30%), Gaps = 16/367 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + ++ + L I N + + + +VP Sbjct: 26 DRYIGGQLITPFIFGVGLVSSLGVAIGYLSDLGNKVVDSNLPLIKALEILLLKVPEFTAY 85 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P ++ ++ + L+ SEL+ RA G+S+ +L+ P + S+++ T + + Sbjct: 86 ALPISVMLTTLLTYGRLSSDSELIALRACGVSLSRLIAPALALSLVVSGITFVFNELVVP 145 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + ++ ++ + + + K L E+F + Sbjct: 146 TANYQATSILVKYLNEEHRFWQQKDIFYPDYEEISLPNGETIKRLKHLFYAEEFDGENMK 205 Query: 186 KKNKIIHRKDADL---------AIIYNDKVKLKKVVEYQYGRIPIDKNST-----TLNIP 231 + D+ + Y+ K++ L + Sbjct: 206 ALTILEWIGDSLNKIVISDSATWNANQNTWDFFNGNIYKIAPDASYKDTFGFKHRQLPLS 265 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLI 290 F + + + N R + + + P + V LI Sbjct: 266 KAPFEFALQGRNPYEMNIIQAQEYTKLLKMIGDQKNLRTFQVRIQQKMSFPFICVVFGLI 325 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + + ++ + F Y + ++ S G G + P AA +P + +++ Sbjct: 326 GSVLGARPQQMSR-STSFGLSVIIIFTYYVLGFLIGSLGLVGAISPFMAAWLPNFIGLAV 384 Query: 351 SILILLQ 357 +L + Sbjct: 385 GGWLLYR 391 >gi|319902150|ref|YP_004161878.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] gi|319417181|gb|ADV44292.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] Length = 378 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 119/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 21 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPYF 80 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ + T + + Sbjct: 81 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFRRMLRPYMVSAAIIAVITFCLGSY 140 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I G I+ ++ + I S I D Sbjct: 141 IIPKGSVTRINFEDKYYKPRKANTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFRD 200 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D ++ VK + + I K + + ++ F Sbjct: 201 KQLVSHLTARSITYDTTSVHKWIVKDYMIRAMDGMKESITKGDRIDTTLFMEPADFLIMK 260 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + + + E +++ I + +TLI S+S + ++ Sbjct: 261 NQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTK- 319 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F TI +F +G + PV A IP +L +++ + Sbjct: 320 GGMGLHLGIGLALSFSYILFQTIASTFAVNGNVPPVIAIWIPNVLYAFVALYL 372 >gi|254360523|ref|ZP_04976672.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|153091063|gb|EDN73068.1| possible inner membrane protein [Mannheimia haemolytica PHL213] Length = 365 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 128/362 (35%), Gaps = 5/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K L L + L +I E +G +Y + A +P Sbjct: 6 MNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDVG-RGSYDGLKAAYYTFLTIPR 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ +++ NL SELV+ +A G S +++ + ++ L IFT+++ Sbjct: 65 DIETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRFRIGLAVMKTALPLVIFTMIIGE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + G + W + N I + +N + F Sbjct: 125 WGVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGNSFIYINHIKNEKSLDNVLIYQFGE 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 ++ + + + K++K + + + Sbjct: 185 GQNKRELQSVLKARTANYSDEKGWVLSKVEKSTVGENQIQQAKQPDQVWQTSLTPSKLGI 244 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + S S + + F + R E F+ + P+ + M L+A S Sbjct: 245 VSLKPESLSISGLADYVGFLKDTGQ-DPKRFEITFWRKVFQPISMAVMMLLAISFIFGPL 303 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQK 358 RS+ + GI +GFM Y + + L ALIP +L + + +L +K Sbjct: 304 RSSTMGAKIVIGIVAGFMFYVANIVFGNLSLIATWLPIPVGALIPSLLCLIIVWWLLSKK 363 Query: 359 ED 360 D Sbjct: 364 RD 365 >gi|90021021|ref|YP_526848.1| SecD export membrane protein [Saccharophagus degradans 2-40] gi|89950621|gb|ABD80636.1| permease YjgP/YjgQ [Saccharophagus degradans 2-40] Length = 352 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 123/360 (34%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY LL + L + DL + + + +Y+ S + +P Sbjct: 1 MTK-LKRYIGHTIAAAVATVLLVILSLDAISDLVDQLSNLS--GDYTFSEAIIFVLLYIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +P LV ++ L +SELV+ RA G+S+ QL+ + + VLV Sbjct: 58 SSAYDYLPLSALVGCLIGLGVLASSSELVVMRAAGVSVLQLVWAVMRPVCVFIGVGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A ++ K + +++ W + N + N T Sbjct: 118 EYVAPYSDQYADSRRALAKGHDRALQAERGVWNREGN-----EYMHFNAVLPNGKLYGIT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGF 237 D+K +++ D AI + + + I+ + + D Sbjct: 173 RYIFDEKGQLLEASFVDSAIYQGEFWFEQDGEVTSFEDGRIEKFGFATREWRTEVSPDLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + ++ +K + + F+ PL + ++ +IA S L Sbjct: 233 NVLVLDADELPMKRLYDYSTYLDKQG-LDSSEYKLAFWHKAFQPLAVASLVMIAISFILG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R V G+ G + T ++ P+ A LIP+++ + L + ++ + Sbjct: 292 PLRQTTMGFRVFIGVIVGLVFQTSQKMLGPASIIMGFSPMFAVLIPIVVCLVLGVFLIRR 351 >gi|227538454|ref|ZP_03968503.1| permease YjgP/YjgQ family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241736|gb|EEI91751.1| permease YjgP/YjgQ family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 359 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 121/357 (33%), Gaps = 2/357 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K YL T ++ + +++ + D++E + + A +P Sbjct: 1 MKIIDWYIIKKYLSTFVFTMAIFTVVMVIFDVSEKLDNFLQYKAPISKIVFQYYAGFIPF 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P I + I + +E+V + G+S ++L P+++ + L+ T + Sbjct: 61 YLNFLSPLINFIAVIFFTSKMADQTEIVPILSGGMSFNRMLRPYMIAASLIFAVTFVFNI 120 Query: 122 PIATSGEKIGIDLIQQWKD-NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I K+ + + + SN I + + + Sbjct: 121 YIIPRTNKMKVSFENVYVKPDKAGGSISATHMQIDSNTYVYIDNFDTRQKIGYNFVLEKF 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K+ I R D V + + +K F+K+ Sbjct: 181 DGDRLKEKMIADRIRWDSVATKWKIENYTNRVINGLHERMDKADQKDTTLDMKPSDFEKY 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 F + + E+ K++ + Y + P +TL+ S+S + R Sbjct: 241 DNMFTAMNTDELSKRIDKEETRGTGMMTELLLEKYKRYIYPFSAFILTLMGVSLSSKKVR 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I F+ +I F G L P+ A +IP ++ +SL + ++ + Sbjct: 301 GGIGLSLGLG-IALSFVYIVLIQFSTMFSLKGGLPPLIAVMIPNLIFLSLGLYLMYK 356 >gi|253702060|ref|YP_003023249.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] gi|251776910|gb|ACT19491.1| permease YjgP/YjgQ family protein [Geobacter sp. M21] Length = 391 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 116/360 (32%), Gaps = 4/360 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+ Y FK L ++ ++ + ++ + E S A + A +P Sbjct: 5 MKKTLYAYIFKEIPTPFLVGMVTFTFVLLMGRFLKLAEMVVEK-GVPFSDVARMVAYLLP 63 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IP L+ ++ F L+ SE+ ++ GIS++ LL P ++ + + + V Sbjct: 64 PFWLFTIPMALLLAMLLAFGRLSGDSEITAMKSCGISLYGLLPPPLLFAACATLACLFVT 123 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWED 178 G L+ + + + I D Sbjct: 124 VYAVPWGNSGFKKLVVEIAQSSAGISIKEKIFNNAFPDMVVYTQSLDTKAQTMGGVIVHD 183 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + +L+ ++ + +++ + Sbjct: 184 ERDPRTPTTIFASTGALVSDPKSNSMEFQLRNGSIHRAEEKGGYRMVQFQEYNLRVSLAE 243 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ S + + + + +++ + +P TL+A + ++ Sbjct: 244 GGNKSPRKVSEMTLDELLHPPKGAQQKEILSRGLEYHGRLALPFSCFVFTLLAIPLGIQN 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + + I + Y ++ K+ G+ G+L P+ A P ++ + I + + Sbjct: 304 RRSGK-ASGFSLSIGVILLYYVALSAFKTLGERGMLPPLLAGWSPNLIFLMAGIYLFKKT 362 >gi|260655096|ref|ZP_05860584.1| putative membrane protein [Jonquetella anthropi E3_33 E1] gi|260630207|gb|EEX48401.1| putative membrane protein [Jonquetella anthropi E3_33 E1] Length = 339 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 126/339 (37%), Gaps = 2/339 (0%) Query: 22 LGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFN 81 + +++ L + S++ L +P ++ +P L+ ++ F Sbjct: 1 MAFSLIMVAGGLLFKLADLIIERGVSLAVAGRLFVYELPGVVVLTLPMSCLLGALLGFGA 60 Query: 82 LNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDN 141 ++ SE+V +A GIS W++ P + ++++ I ++++ + G++ +++ Sbjct: 61 MSTNSEVVALKASGISFWRMNWPVIFWAVIISILSLILNETLVPLGQRAAENVMTFEVAK 120 Query: 142 GDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAI 200 ++Q + + +++ + + + I Sbjct: 121 QKPVLIKQEVFLQAPGGRVVYVGKLDPSSGSMSNVIVQELASGKLTRITVAPNGQWVSGI 180 Query: 201 IYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN 260 Y + ++ E L I + S + S ++ + ++ Sbjct: 181 WYLTDGDVYEMKEPDGVAHLFHFAKQELPISLTPRQIANTSVKPDDLSASDLYRYIAAMK 240 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 +F+F + +P V ++LI S+ + R + I F+ Y Sbjct: 241 MQG-KDISALWVKFHFKLAVPWACVILSLIGTSLGVSHQRHGNRSVGFGQSILIVFLYYV 299 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 ++++ KS G++ L PV A +P I+ + ++ ++ + + Sbjct: 300 LMSVGKSLGQTNALPPVVAGWLPNIIFLVAAVFLIRRAD 338 >gi|218245029|ref|YP_002370400.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|218165507|gb|ACK64244.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] Length = 395 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 111/367 (30%), Gaps = 16/367 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + ++ + L I N + + + +VP Sbjct: 26 DRYIGGQLITPFIFGVGLVSSLGVAIGYLSDLGNKVVDSNLPLIKALEILLLKVPEFTAY 85 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P ++ ++ + L+ SEL+ RA G+S+ +L+ P + S+++ T + + Sbjct: 86 ALPISVMLTTLLTYGRLSSDSELIALRACGVSLSRLIAPALALSLVVSGITFVFNELVVP 145 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + ++ ++ + + + K L E+F + Sbjct: 146 TANYQATSILVKYLNEEHRFWQQKDIFYPDYEEISLPNGETIKRLKHLFYAEEFDGENMK 205 Query: 186 KKNKIIHRKDADL---------AIIYNDKVKLKKVVEYQYGRIPIDKNST-----TLNIP 231 + D+ + Y+ K++ + Sbjct: 206 ALTILEWIGDSLNKIVISDSATWNANQNTWDFFNGNIYKIAPDASYKDTFGFKHRQFPLS 265 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLI 290 F + + + N R + + + P + V LI Sbjct: 266 KAPFEFALQGRNPYEMNIIQAQEYTKLLKMIGDQKNLRTFQVRIQQKMSFPFICVVFGLI 325 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + + ++ + F Y + ++ S G G + P AA +P + +++ Sbjct: 326 GSVLGARPQQMSR-STSFGLSVIIIFTYYVLGFLIGSLGLVGAISPFMAAWLPNFIGLAV 384 Query: 351 SILILLQ 357 +L + Sbjct: 385 GGWLLYR 391 >gi|226943299|ref|YP_002798372.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226718226|gb|ACO77397.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 353 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 128/359 (35%), Gaps = 11/359 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G L RY + L L + L + + + +Y ++ A VP Sbjct: 1 MGKLDRYIGASVSLSILAVLGVLVGLALLFSFVDELGDV--QGDYDLAAAAWYVFLTVPQ 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ ++ +L +SEL + RA GIS+ +++ + ++L + L+ Sbjct: 59 RTYEMLPMGALIGCLIGLGSLASSSELTVIRASGISLGRIVWAVMKPMLVLMVLGGLLGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E + G+ Q + W + N I + + T Sbjct: 119 YLAPWAENKAEAHRSLAQGGGEAQTAKHGLWHRQGNEFVHI-----NAVQPGGVLYGVTR 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 D + ++ A A +L+ V ++ + + +I + Sbjct: 174 YRFDDQRHMLWSSFARKAEFRGGNWQLEDVTTTRFLERSTEVAKAATEQWDILLSPQLLG 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S + + + + +N R F+ ++ PL+ A+ L+A S Sbjct: 234 TVVMDPEALSVTGLWHYIHYLAEQ-ELNNARYWLAFWGKVLQPLVTAALVLMAISFIFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + G+ +GF+ ++ + P+ A L+P L L + +L + Sbjct: 293 LRSVTLGQRLFTGVLAGFVFRMFQDLLGPSSQVFGFSPLLAVLLPAGLCALLGVYLLRR 351 >gi|148265754|ref|YP_001232460.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] gi|146399254|gb|ABQ27887.1| permease YjgP/YjgQ family protein [Geobacter uraniireducens Rf4] Length = 389 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 113/359 (31%), Gaps = 6/359 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+ Y FK L + ++ + L + + ++ + +P Sbjct: 1 MKKTLYLYIFKEIPPPFLLGVATFTFVLLMGRLLRLAEMVVTK-GVPLADVLRMVFYLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IP L+ ++ F L+ SE+ +A G+S++ LL P +++ + + Sbjct: 60 SFLLVTIPMAFLLAILLAFGRLSGDSEITAMKASGVSLYGLLPPVFCFALIAYLAGAFIT 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 G L+ + + + + Sbjct: 120 VYAVPWGNTSFKKLLVEVVEARASLGIKEKIFNDDFPGLVIYTDRYNQQKQTMSGILIQD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLK----KVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + I R + ++L+ + Q ++ I ++ Sbjct: 180 ERDPLEPSTIYARSGVINSDPATKSIRLRLDNGSIHRTQGKTGYRLVEFRNYDLNINLNQ 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + ++ S + + +++ +P + L+ + + Sbjct: 240 AAQTVNKNELDMSLAELRANLASGRFDAKMMRDMRLEYHRRFSLPFACLIFALVGMPLGI 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + RS + I Y +++ K+ G+ +L P+ A P +L +SL I + Sbjct: 300 QNQRSGK-AAGFTMSIGLLLAYYIVLSAGKALGERELLSPLLAVWAPNLLFVSLGIYLF 357 >gi|303230241|ref|ZP_07317009.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-134-V-Col7a] gi|303231004|ref|ZP_07317747.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-049-V-Sch6] gi|302514386|gb|EFL56385.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-049-V-Sch6] gi|302515167|gb|EFL57141.1| permease, YjgP/YjgQ family [Veillonella atypica ACS-134-V-Col7a] Length = 363 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 126/359 (35%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K ++ L+ + + Q + +P Sbjct: 1 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLLLVMKAFFLAMPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II P L+ +++ F L+ TSE+V+ RA G+S +L P + ++L+ I V Sbjct: 61 IILLTFPMSVLLGSLMAFSRLSSTSEIVVMRAGGLSFLRLAMPVYILALLISIGAVAFNE 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++++ ++ ++ N + K + Sbjct: 121 FVVPRTNNMYQTIVREEIMKNASPQTQNHIVLKSMNGDNLSTLMYAKHYDSESKKLSMIT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVK------LKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + +N +V + V + + L I + Sbjct: 181 VQQFNDKGELQQVENAENAEWNGQVWVMHSGIIYDVSAGEGVERTMKFKEQVLPIKSSPN 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + + E+ ++ + K+ ++ + E + Y IPL L+ A + Sbjct: 241 EVQQDQRKPEELTIKELRHQIK-AYKAAYTNSNKLEMEMYQRFTIPLASFVFALVGAPLG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L+ RS+ + F+ Y ++T + GK G L AA+IP L I + + Sbjct: 300 LQKQRSSSSIGFGISILII-FIYYGVMTFAGALGKGGALPTWMAAMIPDTLGIIAGLYL 357 >gi|120611823|ref|YP_971501.1| permease [Acidovorax citrulli AAC00-1] gi|120590287|gb|ABM33727.1| permease YjgP/YjgQ family protein [Acidovorax citrulli AAC00-1] Length = 365 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 130/369 (35%), Gaps = 16/369 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + ++ L + LG + L F D+ + +G + Y +S + + +P Sbjct: 1 MKTIRWLIYREALAAVGFVTLGFLALFFFFDMVDELRYVGRVQGYQMSHALLYVSLGIPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I V ++SE I R G+ W L +V + + T V + Sbjct: 61 HLYELLPITVLIGTIFVMARFAQSSEFTIMRTSGLGPWSALRTLLVLGLGFVMLTFTVGD 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + +++ + ++ G W++ + + + + + + + Sbjct: 121 YLAPATDRLAQLVRARYL--GQITTGATGAWLKERQGDRSVAVNVRALRHDGG-MSNVRI 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR--------IPIDKNSTTLNIPIK 233 D ++ A D +L+ V + R + + S I Sbjct: 178 FEFDGDGRLASTVQAAAGEFGADAWELRDVKRSVFHRRGEAEAHVERLQEASFRWPTHIS 237 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 D + + ++ + + + + E +F+ + P+ + M +++ Sbjct: 238 SDMVAASLLKPDRMATIDLFQYIRHLESNGQA-AQKYEIEFWRKVFYPMSCLVMVVLSLP 296 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI- 352 + RS V G+ +G + + + G P A P I+ LS+ Sbjct: 297 FAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGIIYSLLSLG 356 Query: 353 ---LILLQK 358 ++L++ Sbjct: 357 AFGWLVLRR 365 >gi|23013662|ref|ZP_00053531.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 136/311 (43%), Gaps = 6/311 (1%) Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 ++P ++ I+PF ++ +V F+ L RT ELV++RA GIS WQ + P + + + GIF Sbjct: 3 FLKLPQMLHTILPFAVMIGAMVCFWRLTRTHELVVARAAGISAWQFITPVLAVAGMFGIF 62 Query: 116 TVLVINPIATSGEKIGIDLIQQWK--DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN 173 + NP+A + L + + S++ W++ + ++ + ++ + E Sbjct: 63 EITTFNPMAAAMYSRYERLQDELLAAKSSAFDISEVGLWLREPHDDGEMVVHSETVRQEG 122 Query: 174 HIWE--DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP 231 + D D+ + R A+ A + + ++++ + G+ + K + Sbjct: 123 LVLHIRDAHFFLYDRPDHFYQRIAAETASLEDGAFEVRRAWVMEGGKPSVFKEKMRIPTQ 182 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 + +D + SF+++ + F ++ F + L+ P++ M L+A Sbjct: 183 LTLDRIHDNFASPETLSFWQLPGFIRFFERAG-FTANKHRLYLQSLLASPVLYCGMVLMA 241 Query: 292 ASVSLEFS-RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A SL + RS + G+ +GF +Y ++ + G S L AA P + + Sbjct: 242 AVFSLRPNTRSGGLLARIGGGVAAGFAVYFFSKVIYALGLSATLPQTLAAWTPPLFAGLI 301 Query: 351 SILILLQKEDG 361 + L EDG Sbjct: 302 GLSGLFHLEDG 312 >gi|121594279|ref|YP_986175.1| permease [Acidovorax sp. JS42] gi|120606359|gb|ABM42099.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 369 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 128/372 (34%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP--NYSISRGAVLAATRV 59 + R+ ++ + + L + L F D+ + +G Y +S + A + Sbjct: 1 MKTIRRFIYREVVVGVAFVTLAFLALFFFFDMVDELRWVGRAGANGYQLSHALLFVALSL 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P ++ +++P L+ I V L ++SE I R G+ W+ L+ ++ + TV+V Sbjct: 61 PQLLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLMLGCAFVMVTVIV 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE-NHIWED 178 + IA + EK + + G W++ I + + + P Sbjct: 121 GDYIAPASEKAASLVKARRL--GQISTGATGAWLKERQGDHSIAVNVRAVDPNGAMRGVR 178 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI--------DKNSTTLNI 230 + + + D L++V + + + Sbjct: 179 VFEFDARGRVAATIQAEQATFDDARDAWNLQQVQRTLFEAEADGGMRVSRLQEPTLRWPT 238 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 I D + + E+ + + + R E +F+ + PL + M ++ Sbjct: 239 RISPDMVAASLLKPDKMATIELFRFVRHLEANGQ-SAQRYEIEFWRKVFYPLSCLVMVVL 297 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + RS V G+ +G + + + G P A P ++ L Sbjct: 298 SLPFAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSVL 357 Query: 351 SI----LILLQK 358 S+ ++L++ Sbjct: 358 SLAAFGWLVLRR 369 >gi|282901534|ref|ZP_06309456.1| permease YjgP/YjgQ [Cylindrospermopsis raciborskii CS-505] gi|281193577|gb|EFA68552.1| permease YjgP/YjgQ [Cylindrospermopsis raciborskii CS-505] Length = 388 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 132/372 (35%), Gaps = 17/372 (4%) Query: 1 MP-GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 MP I+ RY L L+ + +V ID + I+ + ++ Sbjct: 13 MPFSIMDRYLAMQLLPIFLFGVGAFTSVVLAIDSLFELLRKVVESGLPINIALKVFVLKL 72 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P ++ P TL+ ++ + L+ SEL+ R G+S+++++ V+ S L+ T + Sbjct: 73 PYVMVYSFPMSTLLATLMTYSKLSSDSELIALRGCGVSVYRIVLTAVLLSGLVTGMTYIF 132 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 I+ + +++ + + ++ G+ ++L ++F Sbjct: 133 NEYISPAANYEASVTLERALKSDQPSFKQQNIYYPEYREEKTKDGGSSRLLARLFYADEF 192 Query: 180 TSITIDKKNKIIH---------RKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNS 225 + I ++ Y Y + R + Sbjct: 193 DGKKMKGLTIIDRSQAGVNQIVVSESAQWNAYKQVWDFYNGTIYLVAPDRSYRNILRFEH 252 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLML 284 L +P K S + + + ++++ + + E + I P + Sbjct: 253 QQLQLPSTPLIVAKNSRDYEEMNIAQSLQQLEIEKLAGNPQRIKKLEVRIQQKIAFPFIC 312 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + L+ +++ R+ + I F+ Y ++++ + ++ IL P A +P Sbjct: 313 IIFGLVGSAMGTIPQRTGR-GRSFGVSIIVIFIYYLLLSVCGALAQAEILSPFVGAWLPN 371 Query: 345 ILTISLSILILL 356 + + + ILIL+ Sbjct: 372 LCGLGMGILILM 383 >gi|256823037|ref|YP_003147000.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] gi|256796576|gb|ACV27232.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] Length = 354 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 125/359 (34%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K L T++ L I+ + L + G+ +Y G + P Sbjct: 1 MNILRFYIGKTILATSVMTLFTLAIIRVLFSLIDESGDFGK-GSYQFVDGLAYSLLLSPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I + P L+ +I L SEL + RA G + Q++ + ++L F + + Sbjct: 60 YIYEFFPMAILIGSIAGLGLLASHSELTVMRAAGKTTMQIVGSALSYGLILIAFAIFLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ D+ + K++ W++ + I + + + + Sbjct: 120 YVAPKTTRMAEDIRNRAILGEQLLKAEQGVWVKDGSKMVHIDE-----MLGSDRMDGVSI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVE---YQYGRIPIDKNSTTLNIPIKMDGFQ 238 D + K+ A A+I +L+ + G ++ I+MD Sbjct: 175 YQFDSQQKLESIIHAPSALISEGVWRLQNGYQSYLTDTGINRERFDAMEWRTNIQMDNLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S+ + + + + + + F+ I+ PL M ++AAS Sbjct: 235 VLSDDPETLDIMSLYRYREYLANNG-LDTQSYDLAFWRKIIQPLSTAIMIVLAASFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ +G + + + A++P + + + +L + Sbjct: 294 MRSVSMGARVLVGVLTGMAYFFAVRTFGPVSLVFGMPAFFGAILPPAIFAAGAWYLLRK 352 >gi|332665471|ref|YP_004448259.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] gi|332334285|gb|AEE51386.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] Length = 365 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 136/358 (37%), Gaps = 8/358 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL Y K +L T + +L +++ ++D +E + E P + + + I Sbjct: 6 KILDWYIIKKFLSTFFFTVLIFLMIAVILDFSEKVEKFIEEPITTREIVLQYYPSFMLWI 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 Q+ TL+ I + +SE++ G+S +L+ + G+ L + +L + Sbjct: 66 GGQLWSVCTLIAVIFFTSRMAYSSEIMSIFNAGVSFNRLMRSYFFGAAFLTLLYLLCTHY 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH-----IWE 177 I GEK D++ ++ D D + + ++ + +K ++ Sbjct: 126 IMPVGEKYRQDIVHKYIDKSDDKGKTTNIHLFVAPNTKVFIGFYRKDDSTARDFRIEHFK 185 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + ++ K ++ + + +++ ++ + TTL++ + F Sbjct: 186 NQQLVSYTKADRAEYLPETRKWRLWDYSSHSFNGLKEDLKMHLAESKDTTLSL--YPEDF 243 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 +S Q + + ++K + N+ + + + Y P+ + +T I +++ Sbjct: 244 VDYSSQQSMMTTPRLMKYIRQQNERGASNTRKYLFELYRRTADPVTIFILTFIGMAIASR 303 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R +A GI G + + F + A +P ++ +++ ++ Sbjct: 304 KVR-GGFGFHLALGIGVGAIFVFLSKFTNVFALGQTIPVWLGAWLPNLVFAFVALRLI 360 >gi|34540317|ref|NP_904796.1| hypothetical protein PG0501 [Porphyromonas gingivalis W83] gi|34396629|gb|AAQ65695.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 360 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 121/350 (34%), Gaps = 2/350 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y K +L T ++ ++ + + V D+NE + + S VP Sbjct: 7 LDKYLIKQFLGTFVFSIILIISVSVVFDINEKIDDFMKPEVSLRSIIFDYYFNFVPYYAN 66 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P + I L SE++ + G+S +L+ P+++ + ++ I T L+ + + Sbjct: 67 LFSPLFVFISVIFFTSKLAEKSEIIAMLSAGVSFKRLMVPYMLSATVIAILTFLLNSFVI 126 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G ID ++ N Q ++ + + + + Sbjct: 127 PPGNATRIDFQNKYIKNKKVQYAESVQLEVKKGVFAFFGSYSDAMRTGYQFSLEEFKGKQ 186 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R D + + +Y + I ++ F + Sbjct: 187 LVSRLTADRIQYDSLYNWRIFNYRIR-HFGKYKETVESGSEMDTVIAVRPADFLVAEDDV 245 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + ++ +S + + + E + + +T+I AS+S + Sbjct: 246 ETMTTTDLHTYISHQKQRGVGNVKLFEIELHKRYAAIFSAFILTIIGASLSSRKVK-GGM 304 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I +A G+ F +T+ +F SG L P AA +P + +++ + Sbjct: 305 GINIAIGLGLSFAYILFMTVAGTFAISGSLPPFMAAWLPNFVFTVIAVSL 354 >gi|33598433|ref|NP_886076.1| hypothetical protein BPP3926 [Bordetella parapertussis 12822] gi|33574562|emb|CAE39209.1| putative membrane protein [Bordetella parapertussis] Length = 422 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 64/370 (17%), Positives = 121/370 (32%), Gaps = 20/370 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + ++ LL + L L + + +G+ +S+ + A +P + + Sbjct: 36 RYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK--FSMLALFYMQALALPTRLYDL 93 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +LL V +I L I L+ + + Sbjct: 94 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEFVTPA 153 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + ++ + + W + PQ I K L + +D T Sbjct: 154 AEIKSGEADLTFRGKAGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLYEFRS 213 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----------------DKNSTTLN 229 ++ A + L V E + L+ Sbjct: 214 DLEMTALWTAPNGRFSRGDLVLTDVSETRIDEHAPSALADAKQPKELPARVTKVPELKLD 273 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S ++ + + N R + +V P L+ M Sbjct: 274 TTLSPERLLARVLTPERMSALTLVDYIEYLRH-NQLQYDRQVVALWRKLVYPFTLLVMIT 332 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 +AA + +R V GI G + + + + G P AL P + + Sbjct: 333 VAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLSRWPPWITALGPNLGALL 392 Query: 350 LSILILLQKE 359 L+ L E Sbjct: 393 LAFGALSMME 402 >gi|85709345|ref|ZP_01040410.1| predicted permease [Erythrobacter sp. NAP1] gi|85688055|gb|EAQ28059.1| predicted permease [Erythrobacter sp. NAP1] Length = 365 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 140/357 (39%), Gaps = 3/357 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y K ++ L L+ ++++ +DL ++ E + A+ R+P +I Sbjct: 11 LTLYLAKMFVVRILAVLVMLVLVLMALDLLGSTGKILEPEGNGQAEIIKYASLRIPQLIA 70 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +P+ L+ ++ LN+ SE+V +A G+S Q+L P ++ + ++ + + + Sbjct: 71 RFLPYSVLLATLITLVTLNQNSEVVAMKAAGLSAHQVLAPLLLTAAVVALISFAFNERVV 130 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 T + ++S + + +++ + + E+ ++ T + Sbjct: 131 TRANSTLKAWEA-VEYGPIPEQSGVRANVYLTDGDNILTASSLIGSGEDIELDNVTWYSR 189 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-KNSTTLNIPIKMDGFQKFSEQ 243 I + A A +L+ + G + + + + + S Sbjct: 190 APGGIISEQIKATGATYAAPGWRLENPKRFDVGSATTEPIDDVVVGEGLTPEQIDLQSVD 249 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++SF+E+ + + + +++ + PL + M L+ + + +RS Q Sbjct: 250 PDAQSFWELSETIDAYEAAGRR-TSEMRAKWWHRLSGPLSALLMPLLGSVAAFGLARSGQ 308 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G+ GF + + + G G P AA P L + + +L++ E+ Sbjct: 309 LFVRAVIGMALGFAYFVVDNAALAMGSFGGYPPFLAAWAPFFLFLLVGETVLIRTEE 365 >gi|300770003|ref|ZP_07079882.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300762479|gb|EFK59296.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 359 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 121/357 (33%), Gaps = 2/357 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K YL T ++ + +++ + D++E + + A +P Sbjct: 1 MKIIDWYIIKKYLSTFVFTMAIFTVVMVIFDVSEKLDNFLQYKAPISKIVFQYYAGFIPF 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P I + I + +E+V + G+S ++L P+++ + L+ T + Sbjct: 61 YLNFLSPLINFIAVIFFTSKMADQTEIVPILSGGMSFNRMLRPYMIAASLIFAVTFVFNI 120 Query: 122 PIATSGEKIGIDLIQQWKD-NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I K+ + + + SN I + + + Sbjct: 121 YIIPRTNKMKVSFENVYVKPDKAGGSISATHMQIDSNTYVYIDNFDTRQKIGYNFVLEKF 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K+ I R D V + + +K F+K+ Sbjct: 181 DADRLKEKMIADRIRWDSVATKWKIENYTNRVINGLNERMEKADQKDTTLDMKPSDFEKY 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 F + + E+ K++ + Y + P +TL+ S+S + R Sbjct: 241 DNMFTAMNTDELSKRIDKEETRGTGMMTELLLEKYKRYIYPFSAFILTLMGVSLSSKKVR 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I F+ +I F G L P+ A +IP ++ +SL + ++ + Sbjct: 301 GGIGLSLGLG-IALSFVYIVLIQFSTMFSLKGGLPPLIAVMIPNLIFLSLGLYLMYK 356 >gi|254491744|ref|ZP_05104923.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxidans DMS010] gi|224463222|gb|EEF79492.1| putative permease, YjgP/YjgQ family [Methylophaga thiooxydans DMS010] Length = 354 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 130/356 (36%), Gaps = 10/356 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + +TL LL + L +D + +G+ NY I A +P Sbjct: 1 MKILQRYIAKNIIASTLLVLLVLLGLYTFMDFITELDDLGK-GNYQILDILSYLALTMPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +++P L+ +++ NL SELV RA G+SI + ++ + LL + +++ Sbjct: 60 RIYELLPVAALMGSVIGLGNLASQSELVAMRAAGVSIKDINKAVLIVAGLLVVVALVMGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ + + +S+ W + N + + + + + Sbjct: 120 VFRPIAEQKARQMQSVSQTGTVGSRSEYGFWTRDGN-----HFNHIERINADGSFSNVAI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 D K+++ A A D L VV+ ++ +S + Sbjct: 175 YEFDDKHRLRILTQAVAAEYQQDSWILSDVVQSTIDEKGVEVSSVAHARWKSQLNPGMVN 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 +++++ + + N + E F+ +++PL M L+A Sbjct: 235 IVVVPPEFLPVWDLLEYVQYLK-RNHQSVAQYELAFWSKMMMPLSTAVMVLLAVPFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS V G G + + G LLP A+ P ++ L+ L+ Sbjct: 294 LRSTPIGGRVLAGTLLGIGFHLFNQSFQHMGLVFGLLPWLASAFPTMVFAGLAWLM 349 >gi|296283031|ref|ZP_06861029.1| permease [Citromicrobium bathyomarinum JL354] Length = 365 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 136/358 (37%), Gaps = 3/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y K + L+ ++++ ++DL Q+ E+P + + + A+ RVP++I Sbjct: 10 TLTLYLAKMFSLRIFAVLVMLVLVLMMLDLLSNSGQILEVPGNTEADLWLYASLRVPMLI 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+ +P+ L+ I+ LN+ SE++ +A G+S Q+L P +V ++L+ + + Sbjct: 70 QRFLPYSVLLATIITLVTLNQNSEVIAMKAAGLSAHQVLAPLIVTALLVAGISFAFNERV 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 T + P D T Sbjct: 130 VTRATAQLTAWEATEFGALPDKPKSKGSIYLEDGQNILTARSYSGGGPAPT-LRDVTYYR 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS-TTLNIPIKMDGFQKFSE 242 +I + DA +A+ D ++ + G + + S T+ I + Sbjct: 189 RSPTAEITQKVDAPMAVHGPDGWAMQNPSVFTVGTASLAQPSQLTVAPGITPATIELQEI 248 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 ++ F+++ + ++ E ++ I PL V M ++ A +RS Sbjct: 249 DPTTQPFWQLGSSIEAYRQAGR-DTEELEANYWHKISGPLAAVLMPILGAVAGFGLARSG 307 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 Q + G+ GF + I + G G P AA P +L + + +L++ E+ Sbjct: 308 QLFMRALIGMALGFAYFVIDNAALAMGDFGGYPPFLAAWAPFLLFLMIGETVLVRTEE 365 >gi|220935306|ref|YP_002514205.1| permease YjgP/YjgQ [Thioalkalivibrio sp. HL-EbGR7] gi|219996616|gb|ACL73218.1| permease YjgP/YjgQ [Thioalkalivibrio sp. HL-EbGR7] Length = 353 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 128/359 (35%), Gaps = 11/359 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y + + TL +L L + +++G +Y + + V A VP Sbjct: 1 MKRLDAYIARNVMGGTLLAMLVLGGLDTLFAFIAELDEIG-RNDYGLIQAVVYTALTVPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ P L+ +++ L SEL RA G+ I ++ + +++ + VL+ Sbjct: 60 RVYELFPTSVLLGSLLSLGALAANSELTAMRAAGVPIAGIVRSVLRAGLMMLVVVVLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E+ + Q + + W + + + + D + Sbjct: 120 AVAPMSEQRAQTIKSQA-SGEEMYRGSAGLWAKDGQRFIQVGVVMPDL-----RLLDLSI 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 +D + ++ A A N L+ + G + + + F Sbjct: 174 YELDAERRLSSMLRAGSASYQNGAWILRDIERSHLGEAGVTGEHVDEERWPRLLAPELFS 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + + + +++ + N + E F+ PL + M L+A Sbjct: 234 VLAVEPRQMAATTLAQYVTYLRE-NDLDSASFELAFWMRFTTPLSSLVMLLLAVPFVFGS 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ + G+ G + + + G L P+ +A +P ++ ++++L L + Sbjct: 293 LRTGGAGQRLFIGLLIGVGFHLLNRTLNHMGLVYGLPPMLSATLPTLIFFAVAMLALRR 351 >gi|33603373|ref|NP_890933.1| hypothetical protein BB4399 [Bordetella bronchiseptica RB50] gi|33577497|emb|CAE34762.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 422 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 121/370 (32%), Gaps = 20/370 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + ++ LL + L L + + +G+ +S+ + A +P + + Sbjct: 36 RYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK--FSMLALFYMQALALPTRLYDL 93 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +LL V +I L I L+ + + Sbjct: 94 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEFVTPA 153 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + ++ + + W + PQ I K L + +D T Sbjct: 154 AEIKSGEADLTFRGKAGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLYEFRS 213 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----------------DKNSTTLN 229 ++ A + L V E + L+ Sbjct: 214 DLEMTALWTAPNGRFSRGDLVLTDVSETRIDEHAPSALADAKQPKEPPARVTKVPELKLD 273 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S ++ + + N R + +V P L+ M Sbjct: 274 TTLSPERLLARVLTPERMSALTLVDYIEYLRH-NQLQYDRQVVALWRKLVYPFTLLVMIT 332 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 IAA + +R V GI G + + + + G P AL P + + Sbjct: 333 IAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLSRWPPWITALGPNLGALL 392 Query: 350 LSILILLQKE 359 L+ L E Sbjct: 393 LAFGALSMME 402 >gi|189500954|ref|YP_001960424.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] gi|189496395|gb|ACE04943.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] Length = 360 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 132/356 (37%), Gaps = 5/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y + Y T ++ + + L V+ L E + + + + +P Sbjct: 1 MKLLDKYIARQYFTTYVFAGISFVSLFIVVSLIENLGSFIDK-GIEAEQIILYYWSLIPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P +L+ ++ + L+ +SEL + G + QLL PF+ ++L+ F +L Sbjct: 60 TILLTSPISSLLASLYITGRLSGSSELTAMKTAGAGMHQLLKPFLAVALLVSFFNILNAG 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + Q+ D + S + + + + IG+ + + Sbjct: 120 WLYPKAAALKNRFETQYFDKTFENISSSNNLHILESRNRILSIGSLDQQNNTGLNISLET 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDK---VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + I K + +V ++ + TL + + + Sbjct: 180 FEGPEIASRIDAKKISYDETLDRWILHETRTRVFSQNGMSYTLNPGNDTLTLSLSATSLR 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S Q + + + ++ + R +F+ + +PL V + L +S Sbjct: 240 DLSIQPDEMDIMQHYRYIDEKREAGFSNLDRVIVKFHNKLALPLASVIVILTGVPLSARK 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS I +F+GF+ + + + G G+L PV AA +P +L +++ I I Sbjct: 300 KRSG-LAIEFGISLFTGFIYLGLQRTLSTAGYRGLLDPVLAAWLPDLLFLAVGIAI 354 >gi|222110916|ref|YP_002553180.1| permease yjgp/yjgq family protein [Acidovorax ebreus TPSY] gi|221730360|gb|ACM33180.1| permease YjgP/YjgQ family protein [Acidovorax ebreus TPSY] Length = 369 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 127/372 (34%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP--NYSISRGAVLAATRV 59 + R+ ++ + + L + L F D+ + +G Y +S + A + Sbjct: 1 MKTIRRFIYREVVVGVAFVTLAFLALFFFFDMVDELRWVGRAGANGYQLSHALLFVALSL 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +++P L+ I V L ++SE I R G+ W+ L+ ++ + TV+V Sbjct: 61 PQHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLMLGCAFVMVTVIV 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE-NHIWED 178 + IA + EK + + G W++ I + + + P Sbjct: 121 GDYIAPASEKAASLVKARRL--GQISTGATGAWLKERQGDHSIAVNVRAVDPNGAMRGVR 178 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI--------DKNSTTLNI 230 + + + D L++V + + + Sbjct: 179 VFEFDARGRVAATIQAEQATFDDARDAWNLQQVERTLFEAEADGGMRVSRLQEPTLRWPT 238 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 I D + + E+ + + + R E +F+ + PL + M ++ Sbjct: 239 RISPDMVAASLLKPDKMATIELFRFVRHLEANGQ-SAQRYEIEFWRKVFYPLSCLVMVVL 297 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + RS V G+ +G + + + G P A P ++ L Sbjct: 298 SLPFAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSVL 357 Query: 351 SI----LILLQK 358 S+ ++L++ Sbjct: 358 SLAAFGWLVLRR 369 >gi|86141356|ref|ZP_01059902.1| putative membrane protein [Leeuwenhoekiella blandensis MED217] gi|85831915|gb|EAQ50370.1| putative membrane protein [Leeuwenhoekiella blandensis MED217] Length = 358 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 127/360 (35%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T + LL + + ++L E ++M A+ Sbjct: 1 MKILDWYILKRYLGTFITMLLLFIPIGITVNLAEKIDKML-ANEVPFVEIALYYLDFTIY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + G+S ++ L P+++G+ ++ + ++ Sbjct: 60 FANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFYRFLRPYLIGATIVCVGAYILGT 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + + ++ NG + + QI++ +I + P + + ++FT Sbjct: 120 YLAPAASQGFNEFTYEYLKNGKAARETRNVYRQINDND---YIYVSRFTPSSKMGQNFTL 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLNIPIKMDGF 237 + + + D + + + D + ++ Sbjct: 177 EHFENNTLQYKIQARSIVYRPEDTLYRLNGYKKRIVGKEGDILISEPKLDTLFSFDLEDL 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + + R E Y +P+ +T+IA +VS Sbjct: 237 TPLEYIAETLTTPRLREFIDKERARGSSAINRYEVVLYKRYSLPVSAYILTIIAVAVS-S 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R I +A GI F+ + + + P+ A +P +L L+I +L + Sbjct: 296 MKRRGGMGINLALGISLAFIFIFFDKVFGTISEQSDFSPMVAVWLPNVLFGILAIYLLNR 355 >gi|225075101|ref|ZP_03718300.1| hypothetical protein NEIFLAOT_00100 [Neisseria flavescens NRL30031/H210] gi|224953585|gb|EEG34794.1| hypothetical protein NEIFLAOT_00100 [Neisseria flavescens NRL30031/H210] Length = 356 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 138/359 (38%), Gaps = 10/359 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY + +Y LL + L ++ +G+ +Y+ + A ++P Sbjct: 3 LISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGK-GSYNGTTMAQYVLMQMPARA 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++P L+ +V L SEL + +A G+S ++L ++ I T + I Sbjct: 62 YELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKILLILSQFGLIFAIATATLGEWI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + ++ NG + W++ +++ I +++LP++ + Sbjct: 122 APVLSQKAENIKAAAI-NGKISTGNTGLWLK----EKNSIINVREMLPDHTLLGIKIWAR 176 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQKF 240 DK + + + +LK + ++ ++ I +K + Sbjct: 177 NDKNELTQATEAESAVLNNDGSWQLKNIRRSTLSEDKVEVSTAAEENWPIAVKRNLMDVL 236 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S E+ +S +N + ++ +V P+ M L+A + + + +R Sbjct: 237 LVKPDQMSVGELTTYISHLENNNQ-NTQIYAIAWWRKLVYPVAAWVMALVAFAFTPQTTR 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + GI G + + + + +LP A +P +L L++ ++ +E Sbjct: 296 HGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVLPFLAGALPTVLFALLAVYLIRCQE 354 >gi|121611823|ref|YP_999630.1| permease [Verminephrobacter eiseniae EF01-2] gi|121556463|gb|ABM60612.1| permease YjgP/YjgQ family protein [Verminephrobacter eiseniae EF01-2] Length = 369 Score = 127 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 123/372 (33%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMG--ELPNYSISRGAVLAATRV 59 + R + L + G + L F DL + +G Y +S + A + Sbjct: 1 MKTIRRLIHREALSAVCFVTAGFLALFFFFDLIDELRWVGLAGREGYHLSHALLFVALGI 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +++P L+ I V L ++SE I R G+ W+ L + + T V Sbjct: 61 PSHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGMGPWRALRTLLTLGGFFVLLTFAV 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +A ++ + W++ + + + + P + + Sbjct: 121 GDYLAPWTDRTAQRIKAHALGGLTS--GATGAWLKERQDRHSFAVNVRALTPNGGMRDVR 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---------TTLNI 230 D+ + + + +L +V ++ R ++ Sbjct: 179 IFEFDDQGRLVTQTRATVGRFATDGAWELAQVRRSRFARGDGQDDARVEHLDAPALRWPT 238 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 I D + + ++ + + N + R +F+ + PL + M ++ Sbjct: 239 RISADMVAASLLKPDRMATLDLFQFIRHLNANGQ-STQRYAIEFWRKLFYPLSCLVMVVL 297 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A + RS V G+ +G + + + G P A P ++ L Sbjct: 298 ALPFAYLHLRSGGTAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGLIYSLL 357 Query: 351 SI----LILLQK 358 S+ ++L++ Sbjct: 358 SLAAFGWLVLRR 369 >gi|126667524|ref|ZP_01738494.1| predicted Permease [Marinobacter sp. ELB17] gi|126627950|gb|EAZ98577.1| predicted Permease [Marinobacter sp. ELB17] Length = 353 Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 120/360 (33%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I RY K ++ + L + + G NY +P Sbjct: 1 MHKI-DRYVMKTVGGAMFLVMVVVLSLDLIFAFIAELD--GTANNYQTLDALWYVFLTLP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I +P + +V ++ +SEL + RA G+SI +++ + ++ + + V + Sbjct: 58 RRIYDYLPLGAFMGCLVGLGSMASSSELTVIRAAGVSIKRIVWSAMKPALFVVLLGVGIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E+I G + W + N + + + + Sbjct: 118 EYLAPPAERIAQSEKAVALGAGSNVAAASGLWHREGN-----VFIHMNAVQPSGVLFGIS 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 +++ +++ A+ AI D L+ V + + N + Sbjct: 173 MFRFNEQRQLLAASFAERAIYQGDHWILENVQTTELAEQGTTRVTHNQLRWESGLSPSVL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + ++ + ++ R F+ ++PL M L+A S Sbjct: 233 SVLIVKPENLAMTGLLTYARYLDEQG-LSASRYWLAFWKKTLMPLGTAVMVLVAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ G + ++ P+ A L+P+ + + IL++ + Sbjct: 292 PLRSVTMGFRVFTGLLVGLSFKYMQDLLGPMSVVYGFEPILAVLVPIAVNAGIGILLMRR 351 >gi|326316898|ref|YP_004234570.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373734|gb|ADX46003.1| permease YjgP/YjgQ family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 365 Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 130/369 (35%), Gaps = 16/369 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + ++ L + LG + L F D+ + +G + Y +S + + +P Sbjct: 1 MKTIRGLIYREALAAVGFVTLGFLALFFFFDMVDELRYVGRVQAYQMSHALLYVSLGIPS 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I V ++SE I R G+ W+ L +V + + T V + Sbjct: 61 HLYELLPITVLIGTIFVMARFAQSSEFTIMRTSGLGPWRALRTLLVLGLGFVMLTFTVGD 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + +++ + ++ G W++ + + + + + + + Sbjct: 121 YLAPATDRLAQLVRARYL--GQITTGATGAWLKERQGDRSVAVNVRALRHDGG-MSNVRI 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR--------IPIDKNSTTLNIPIK 233 D ++ A D +L V + R + ++ I Sbjct: 178 FEFDGDGRLASTLQAAAGEFGTDAWELSDVKRSVFHRRGEAEAHVERLQESRFRWPTHIS 237 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 D + + ++ + + + + E +F+ + PL + M +++ Sbjct: 238 ADMVAASLLKPDRMATIDLFQYIRHLESNGQA-AQKYEIEFWRKVFYPLSCLVMVVLSLP 296 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI- 352 + RS V G+ +G + + + G P A P I+ LS+ Sbjct: 297 FAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGIIYSLLSLG 356 Query: 353 ---LILLQK 358 ++L++ Sbjct: 357 AFGWLVLRR 365 >gi|325860534|ref|ZP_08173638.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|327313657|ref|YP_004329094.1| permease [Prevotella denticola F0289] gi|325481919|gb|EGC84948.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|326944618|gb|AEA20503.1| permease, YjgP/YjgQ family [Prevotella denticola F0289] Length = 405 Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 118/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GIL Y + ++ T +Y +L + + V D NE ++ + + A +P Sbjct: 46 GILDWYIIRKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYY 105 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+SI +L+ P+++ +L+ T + + Sbjct: 106 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIRRLMRPYMISCVLIAGLTFYLNSF 165 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + ++++ ++ + N I + Sbjct: 166 VIPHGTVIRQNFESLYRNSKKNTSAENVQLYVAKNTTAYIQHYDNQYKRGYGFSLVKIKD 225 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQK 239 + D +L + S + ++ Sbjct: 226 KKIVSHMTAMEIQYDTVADTKFHWRLSNWKMRTLKGLKEHIQSGASKDTVLLMEPTDLVY 285 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E++ +S + + E +F+ I + +T+I S+S Sbjct: 286 SKGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSLSSR-K 344 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F P+ AA IP I+ ++ Sbjct: 345 RKGGMGLYLGIGLALSFSYIMLQTVSSTFAIQADTPPLLAAWIPNIIFAVIAYF 398 >gi|158521442|ref|YP_001529312.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] gi|158510268|gb|ABW67235.1| permease YjgP/YjgQ family protein [Desulfococcus oleovorans Hxd3] Length = 391 Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 116/359 (32%), Gaps = 12/359 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + L ++ L + + ++ P + Sbjct: 6 IDRYIMAELVPVFGVSLAVFTLVFLTHQLLD-ITNFIVNYGTGLGVVMLMLVYSTPYFLV 64 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +IP T++ ++ F ++ +E+V ++ G+S+++L P + + + T+L+ Sbjct: 65 YVIPISTMMAVLLTFLRMSGDNEIVALKSSGVSLYRLFYPVMGFCVAACLLTLLMTLWGL 124 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK---------ILPENHI 175 G+ L + + + N K I + Sbjct: 125 PRGKVAFKQLAYTVVTSNPNLGIVDREFNTLFNGITLYVGQFDKKQRVLSDVFIEDQRSA 184 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + T + + + ++ + + I + L++ Sbjct: 185 GKPVTICAPSGTLDVDMVGQVVRLSLADGRMYQVDLRDRSSRVIRFETYDIHLDLERAGQ 244 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S E+ + + + + A + + IP V + L+A + Sbjct: 245 VASTAARSEKEMSLAELFDHIQKAGAAGLPRGS-ARMELHKKFSIPFACVVLGLLAVPLG 303 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ +R + + + + Y +++ + G+SG L P A +P ++ L + + Sbjct: 304 VQ-ARGRKTSSGIGLALVFFLLYYLVLSGGEILGESGFLHPALAMWLPDMVMGGLGLFL 361 >gi|213583965|ref|ZP_03365791.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 342 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 117/343 (34%), Gaps = 3/343 (0%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 + L + L +I + + G+ NY + VP IQ P L+ + Sbjct: 1 IMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPKDIQIFFPMAALLGAL 59 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + L + SELV+ +A G + Q+ + +I L + T+ + +A GE++ + Sbjct: 60 LGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRA 119 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 Q G + W + N I F + + Sbjct: 120 QAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRLQSVRYAASAKF 179 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFSEQFASRSFYEIIKK 255 D ++ + +I + S T + D + + S + Sbjct: 180 DPEHKVWRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNY 239 Query: 256 MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSG 315 + + S R + + I PL + M L+A S RS + V GI G Sbjct: 240 VKYLKSSGQ-DAGRYQFNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFG 298 Query: 316 FMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 F+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 299 FVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 341 >gi|332530549|ref|ZP_08406487.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] gi|332039995|gb|EGI76383.1| permease YjgP/YjgQ [Hylemonella gracilis ATCC 19624] Length = 372 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 124/365 (33%), Gaps = 12/365 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMG--ELPNYSISRGAVLAATRVPL 61 L R F+ L T + L + L D + + +G + P + + + + P Sbjct: 6 TLRRLLFREILFTASFVTLAFLALFVFFDFIDQLSAVGRPDRPGFELPQALIYVVLLAPG 65 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I V L ++SE I R G+ W+ L + + T ++ + Sbjct: 66 HLYELLPITVLIGTIYVMTRLAQSSEFTILRTSGLGPWRALAMLLTAGGVFASATFVIGD 125 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ ++ Q++ G W++ P I +LP+ + Sbjct: 126 YLSPWSNQVAQAYRAQFRKEGA-STIKGGAWLREREPYAKYGINIGALLPDGTLQRVRIY 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG--------RIPIDKNSTTLNIPIK 233 + N + + + I + L V ++ S I Sbjct: 185 EIDNAGNLVSTLQASTARINNDQSWTLMGVERTEFNAAGPDVRRIETTQLPSYRWPTGIS 244 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + ++ + N + R E QF+ + PL + M ++A Sbjct: 245 AEMISAAVLDPDRMNTVDLFLYIGHLED-NAQNAERYEIQFWKKVFYPLSCLVMVMMALP 303 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + R+ + V G+ +G + + ++ G+ P AA P ++ + S+ Sbjct: 304 FAYLHFRNQGISLYVFGGVMAGVTFFFLNSMFGYIGELRHWTPWIAAATPGLIFMLFSLA 363 Query: 354 ILLQK 358 Sbjct: 364 AFAWL 368 >gi|258648441|ref|ZP_05735910.1| putative membrane protein [Prevotella tannerae ATCC 51259] gi|260851193|gb|EEX71062.1| putative membrane protein [Prevotella tannerae ATCC 51259] Length = 428 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 118/358 (32%), Gaps = 5/358 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY +L T ++ + + + + D NE ++ + +P Sbjct: 70 LDRYIIYKFLSTYIFLIGIIISIAIIFDYNEKIDKFEKAHVSWTKIAFDYYLNFIPYFSN 129 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P + I L SE++ ++ G+S +LL P+++ + ++ + + + + Sbjct: 130 LFSPLFVFIAVIFFTSKLADNSEIIAMKSTGMSFRRLLRPYMISAAIIALTSFGLGAYVI 189 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-ISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G ++ ++ + S MQ + I + D Sbjct: 190 PKGNVARVNFENRYIKKLNAPTSVENVQMQVDTGVVVYISRFDNETKSGYGFSLDKFYGK 249 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQKF 240 + D ++ L++V + + + I ++ F Sbjct: 250 KLIDHLTAQSIQYDTLAGKKNQWTLRQVQQRKMRGLRERISYADKVDTIIMMEPQDFFYV 309 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 Q + + E+ + + E +++ +P +TLI S+S R Sbjct: 310 RNQQETMTVPELRQFIDKQQMRGAAGVSLFEVEYHKRFAMPFAAFILTLIGVSLS-SQKR 368 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 N + GI F TI SF + P+ + IP +L + ++ + + Sbjct: 369 KNGMGTSIGVGIALSFSYILFQTISSSFAVNANWSPMLSVWIPNLLFVLIAFGLYKRT 426 >gi|298206762|ref|YP_003714941.1| hypothetical protein CA2559_00860 [Croceibacter atlanticus HTCC2559] gi|83849393|gb|EAP87261.1| hypothetical protein CA2559_00860 [Croceibacter atlanticus HTCC2559] Length = 359 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 119/358 (33%), Gaps = 6/358 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T + LL + + ++L E +++ + A Sbjct: 1 MKILDWYILKRYLGTFVTLLLLFIPIGITVNLAEKIDKIL-ANDVPFIEVAEYYLNFTIY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + G+S ++ L P+++G+ ++ + +++ Sbjct: 60 FANLLFPLFLFLSVIWFTSKLANNTEIIAFLSSGVSFYRFLRPYLIGATIVCLLALIMGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A S K + + +G + + + N + I+ Sbjct: 120 YLAPSASKGFNEFKYTYLKSGGDNQQETKNVYRQINEDEVIYATNFN-PSRQSALNFTLE 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG---RIPIDKNSTTLNIPIKMDGFQ 238 D + + L + G I +P + D Sbjct: 179 HFKDNVLEYKISASRLQYNKEDTTYTLTNFNKRLVGARGDSLIHYRKLDTILPFEFDELT 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + +F E+ K + + + R Y P+ +T+IA +VS Sbjct: 239 PNSYVAETLNFNELNKFIEDEKRRGSGNLNRYLVVAYKRWSTPVSAYILTIIAVAVSA-M 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R I +A GI F + ++ + + P+ A P + L+I +L Sbjct: 298 KRRGGMGINLAIGIAVAFSFVFLDKVLGTIAEQSDFSPLVAVWFPNVSFGILAIYLLY 355 >gi|257465008|ref|ZP_05629379.1| permease, inner membrane protein yjgQ [Actinobacillus minor 202] gi|257450668|gb|EEV24711.1| permease, inner membrane protein yjgQ [Actinobacillus minor 202] Length = 360 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K L L + L +I E +G+ +Y A +P Sbjct: 6 MNVLERYIGKTILSAIFLTLFLLVGLGAIIKFVEEFKAVGK-GSYDALLAAYYTFLTIPR 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ +++ NL SELV+ +A G S +++ + ++ L +FT+++ Sbjct: 65 DVETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTAVPLILFTMIIGE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ D+ + G + W + I + + S Sbjct: 125 WGVPQTEQYARDMRSVAQSGGSMLSTSGGFWARDGENFVYIRR------IGSETQLNNLS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI---PIDKNSTTLNIPIKMDGFQ 238 I K ++ A A ND LKKV + + I Sbjct: 179 IYHFDKKELKSITQAAEAKYTNDNWILKKVEKSTIEGNTIKQSKEKDQPWQTSITPSKLG 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F ++ R E F+ + P+ + M L+A S Sbjct: 239 IVSLKPESLSITGLADYVGFLKETGQ-DPKRFEITFWRKVYQPISMAVMMLLAISFIFGP 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GFM Y + + L ALIP ++ +S+ +L + Sbjct: 298 LRSSTMGAKIVIGIVAGFMFYVANIVFGNMSLIATWLPVSIGALIPSLICLSIVWWLLTK 357 Query: 358 KED 360 K D Sbjct: 358 KRD 360 >gi|330997889|ref|ZP_08321723.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] gi|329569493|gb|EGG51263.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] Length = 368 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 109/353 (30%), Gaps = 4/353 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y K +L T + + + + V D NE ++ A VP Sbjct: 11 LDVYLIKKFLGTYFFSIALIISIAVVFDFNENIDKFTTNHAPWKGIIFEYYANFVPYFSN 70 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P + I L SE++ A G+S +L+ P+++ + ++ + T L+ + Sbjct: 71 LFSPLFVFISVIFFTSKLAENSEIIAMMAAGMSFKRLMRPYMISAAIIAVMTFLLGAYVI 130 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G ++ +K + + + + I + H D Sbjct: 131 PKGSVTRLNFENTYKKKKRTEFAQNVQLQVDTGVIAFIEHFDGRTKTGYHFSLDKFVNKK 190 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQKFS 241 + D ++ + + + I ++ F Sbjct: 191 LVSHLTAASVSYDTLSDERYHWRINNYTLRELKGMREYISHGSRIDSIIAMEPSDFLLTR 250 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + E+ + + + E ++ P +T+I S+S R Sbjct: 251 NQQETLTSPELKEYIVKQRARGSGNVKPFEVEYQKRFATPFASFILTIIGLSLSAR-KRK 309 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ T+ +F + P AA +P I+ ++ + Sbjct: 310 GGMGLYLGIGLALSASYILFQTVSSTFAINADWPPALAAWLPNIIFAFIAFFL 362 >gi|294341187|emb|CAZ89588.1| putative permease YjgP/YjgQ [Thiomonas sp. 3As] Length = 365 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 124/364 (34%), Gaps = 10/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + R+ + L L + L+F ID+ + +G+ P +S+S + A +P Sbjct: 1 MRTVRRFLLLHVLSAVGLVTLAFLALLFFIDMLNDLSNLGK-PGFSLSGTLLHVALSMPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P TLV + +L +SE I R G+S L + + L + L+ Sbjct: 60 RAYEVLPIATLVGGVFALASLAASSEFTILRISGLSPRAALGLLLQLAAALVVTLFLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + ++ L +G + W++ + + K + D Sbjct: 120 WLAPAAGQLSARLQA-GGGSGIGTQLASGVWLRNDSDRSGNQTVNIKAINTRGDLTDIHI 178 Query: 182 ITIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGRIP------IDKNSTTLNIPIKM 234 ++ + +I A L V + + S + Sbjct: 179 YVLNAQAQIAAELHAPSGQYEGGGTWMLHNVTRTELPQQTGAALKVTQLPSYRWRTSLSP 238 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 S ++ + + +N R E Q + + P V M L+A Sbjct: 239 SVLGVLLLSPDKMSAIDLWRYIQHLR-ANHQAAERYEIQLWKKLFYPFSAVVMLLLALPF 297 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +RS V GI G + T+ S G G P A +P++L L +++ Sbjct: 298 AYLHTRSKGVSGKVLAGIVLGIAFILLNTLFSSLGILGTWPPAITAAMPMLLFGGLGLIV 357 Query: 355 LLQK 358 + Sbjct: 358 FAWQ 361 >gi|116747638|ref|YP_844325.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] gi|116696702|gb|ABK15890.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] Length = 360 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 125/363 (34%), Gaps = 17/363 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY +++L + L L ++D E Q E + + P Sbjct: 1 MRIIPRYVLRHFLPVFMLALFTFTSLYLIVDFFENMEQFIEKR-VPAADTIAYFLNKTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q IP L+ ++ L R EL+ A G+ + P V + + +++ Sbjct: 60 VAAQGIPMAALLGALITLGLLKRNRELIALEAAGVKTVTYVTPIVAAAFFIAAVHLVLGE 119 Query: 122 PIATSGEKIGIDLIQQW--KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 ++ S ++ + + + G W N + K+ E Sbjct: 120 TVSRSMNQVSTKIWNEQVQRRKGHFSWGVENVWYHGQNVIYQVRFYDKR----TQTLEKV 175 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL------NIPIK 233 + +D +++ R DA + + ++ + ++ ++ + P Sbjct: 176 SLFFLDPSFRLVQRLDARRFRWDGARWQAEQGLFLKFSESGTEQETFDQRAFTLQETPAD 235 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 G + E+ Y +K+ +++ + + + PL + + ++ Sbjct: 236 FSGLETIPEELDWLDLYRYAEKIRQEGYNSLPYIIE----LHLRVAFPLSAIVLAILGII 291 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 ++L S + V G+ G + + + + +G L PV ++ ++ ++ Sbjct: 292 IALRQSMHGGIALGVGIGLLVGSSYFVVQQLGCALAGAGALPPVVGVWAANVIFLAAAVY 351 Query: 354 ILL 356 + + Sbjct: 352 LWI 354 >gi|304382916|ref|ZP_07365398.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335941|gb|EFM02189.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 402 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 111/354 (31%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L RY + ++ T ++ + + + V D+NE + E + VP Sbjct: 43 KRLDRYIIRKFIGTYIFAIALIISISIVFDVNENLAKFSEYKAPLKAIVFDYYMNFVPYF 102 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A GIS +L+ P++ +L+ + + Sbjct: 103 ANLFSPLFVFIAVIFFTSKLAGNSEIISMLAAGISFRRLIRPYMFSCVLISGLSFYLSAY 162 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +K+ ++ + + + I Sbjct: 163 VIPHGTVIRQNFETLYKNKKKNTSAENVQLQVGKGVIAYMKLYDNTIKKGYGFCLYKFEN 222 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D K Q + S + ++ Sbjct: 223 KKLVSHMTASEIQYDTISDSKYHWKAMDWKIRQLRGLREKITSGITKDTVLQMEPTDLVY 282 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + +++ +S + + + +++ I +T+I S+S Sbjct: 283 SKGQQETFTSPQLLDYISKQIDRGSGNVVQYQVEYHKRIASSFASFILTIIGVSLSSR-K 341 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + P+ AA +P I+ ++ Sbjct: 342 RKGGMGLYLGIGLALSFGYIMLQTVSSTFAINANTPPILAAWLPNIIFAFVAYF 395 >gi|85859085|ref|YP_461287.1| permease [Syntrophus aciditrophicus SB] gi|85722176|gb|ABC77119.1| permease [Syntrophus aciditrophicus SB] Length = 359 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 72/358 (20%), Positives = 147/358 (41%), Gaps = 8/358 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + +L+ L +L + L ++D E + + + R+P+++ Sbjct: 3 ILDRYISREFLRFFLLVILSFLSLFLIVDFFEKLKMLINYS-ATFYQILAFFFFRIPMML 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L+ +++ F +L++ SE+V RA G+S+++ P ++ S L+ +FT + I Sbjct: 62 SLTIPAAVLLSSLLTFGSLSKNSEIVAMRASGVSLYRSSIPILLISFLIALFTFVFSELI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + Q I QI K PE++ T Sbjct: 122 TPYANEKAEYIRKVEIEKKEIQ--GIFKQEQIWYRGTRGIYNFKLFDPEHNTLRGITLNY 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDGFQK 239 +D+K +I R DA+ A+ ++ ++ ++ + L+ P F+ Sbjct: 180 MDRKMNLIMRVDAERAVWDRNQWVFYNLLIVRFDSAGFPVMERYGEKILDFPETPSDFRV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + ++E+ K + + R + I P + V + +I S SL+ Sbjct: 240 IQKDSEQMGYFELRKYVQKIRTEG-YDATRYLADLHGKIAFPFVCVLLAVIGISFSLKTE 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + G+ GF + + S G+SG L P+ AA + +L ++++ Sbjct: 299 RSGGLAGSIFAGLIIGFSYWILFAFSMSLGRSGTLPPLLAAWLANLLFGLSALVLFKH 356 >gi|149378263|ref|ZP_01895975.1| predicted Permease [Marinobacter algicola DG893] gi|149357460|gb|EDM45970.1| predicted Permease [Marinobacter algicola DG893] Length = 353 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 120/360 (33%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I RY +L + L + + +Y + + +P Sbjct: 1 MRKI-DRYVMSTVGGAMFLVMLVVLSLDLIFAFIAELDDA--ENDYQTLQALLYVVMTLP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I +P + +V + +SEL + RA G+S+ +++ + ++++ + VL+ Sbjct: 58 RRIYDYLPLGAFMGCLVGLGTMASSSELTVIRAAGVSLKRIVWSAMKPTLVVVVLGVLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E++ + G+ S W + + + + N + + Sbjct: 118 EYVAPPAERMAQSQKTVAQGAGESIASASGIWHREGDVFMHL-----NAVQPNGVLHGVS 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 D + ++ A+ I D L+ V + + + + Sbjct: 173 LFRFDDERWLVSASFAERGIYQGDHWLLENVATTRLSDEKTTQETHRALRWETGLSPSVL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + S+ + + F+ +++PL M L+A S Sbjct: 233 SVLIVKPEDLAISGLYTYASYLGEQG-LNAANYWLAFWKKVLMPLGTAVMVLVAISFVFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS V G+ G + + ++ PV A ++P+ + + +++ + Sbjct: 292 PLRSVTMGFRVFTGLIVGLLFKYMQDLLGPMSLVFGFNPVLAIILPIAINAVVGAVLMKR 351 >gi|110833358|ref|YP_692217.1| hypothetical protein ABO_0497 [Alcanivorax borkumensis SK2] gi|110646469|emb|CAL15945.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 353 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 121/359 (33%), Gaps = 11/359 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RYF++ + TL L + L + + NY + T P Sbjct: 1 MKLLKRYFWRAVMIPTLAILFIIVGLDCLFGFIYELEFL--RGNYQVMEALQFILTTTPR 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P L+ ++ L + EL + RA G+S ++ + ++L I ++ + Sbjct: 59 RFYEYMPMAILLGTLIGLSLLANSGELSVIRAAGVSTLKVSWLVLRPVLVLIILSIPLGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E++ + G+ +S W + I + N + T Sbjct: 119 YLTPYSEQVAQSNRSMAEGGGEALRSKYGYWHREGPEFIHI-----NAVQPNGVLHGLTR 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 K+ + + AI + L+ + + K+ + Sbjct: 174 YRFSDGQKLTETQYVNRAIYQGESWSLEGIQGTRLFADHVETYQKDQGEWQTELTPQLLS 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + ++++ + + F+ + +PL + M LIA S Sbjct: 234 IVVLKPDNLALVKLLEYTRYLKRQG-LETADYMLSFWQKLFMPLATIGMVLIAISFVFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + GI +G + + P+ AA++P L + L I +L + Sbjct: 293 LREVTMGLRLTAGIVAGLIFHYGQQFFGQLSLVFHTDPLLAAILPPSLCLVLGIWLLQR 351 >gi|307250355|ref|ZP_07532304.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857630|gb|EFM89737.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 360 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 139/363 (38%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + LL + LVF+I L E +G+ +Y + +P Sbjct: 6 MNILERYIGKTIITMVFAVLLMSSGLVFIIKLVEEFKDVGK-GSYDALTATYYSLLMLPS 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I++ IP + L+ ++ NL SELV+ ++ G S +++ + +I L +FT+LV Sbjct: 65 DIKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + G + W + N I EN + S Sbjct: 125 WGIPQTEQYARNMRSIAQSGGSMLSTKGGFWAKDGNDFIYIRH------IENERKLNNVS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQ 238 I + + AD A+ + L++V + + I Sbjct: 179 IYHFEDKALKSVTQADNAVFNGENWTLQRVQTSSLADNSIQQAKEVNKDWQTTITPSKLG 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F ++ + R + F+ + P+ + M L+A S Sbjct: 239 IVSLKPESLSISGLSDYVGFLKETGQ-DSKRFQIAFWRKVYQPISMAVMMLLAISFVFGP 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GF+ Y + + + ALIP ++ +S+ +L + Sbjct: 298 LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTK 357 Query: 358 KED 360 K D Sbjct: 358 KRD 360 >gi|163854870|ref|YP_001629168.1| hypothetical protein Bpet0565 [Bordetella petrii DSM 12804] gi|163258598|emb|CAP40897.1| conserved hypothetical protein [Bordetella petrii] Length = 392 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 63/370 (17%), Positives = 118/370 (31%), Gaps = 20/370 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + ++ LL + L L + + +G+ +S+ + A +P + + Sbjct: 6 RYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK--FSMLALLYMQALALPTRLYDL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +LL + ++ L I L+ + + Sbjct: 64 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLRMLWLITLPLMIGASLLSEFVTPA 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + ++ + D W + I L + E T Sbjct: 124 AEIKSGEASLMFRGKASGTRMDSGYWFKEPTRDGGTRIINIAKLLADGNVEGVTLYEFKP 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVV-----------------EYQYGRIPIDKNSTTLN 229 ++ A DK+ LK VV L+ Sbjct: 184 GLQLTTMSTAATGAFTRDKLVLKNVVETHIDDRAAQALADAKPPRTPPASVTKLPQRELD 243 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S ++ + + N R + + P L+ M Sbjct: 244 TTLSPERLLARVLTPERMSLNTLLDYIDYL-HHNQLDAGRQVVALWRKVSYPFTLLVMIT 302 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 IAA + +R V GI G + + + + G P AL P + Sbjct: 303 IAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLSRWPPWLTALGPNVGATL 362 Query: 350 LSILILLQKE 359 L++ L E Sbjct: 363 LALGALSLME 372 >gi|240948567|ref|ZP_04752940.1| permease, inner membrane protein yjgQ [Actinobacillus minor NM305] gi|240297075|gb|EER47646.1| permease, inner membrane protein yjgQ [Actinobacillus minor NM305] Length = 360 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K L L + L +I E +G+ +Y A +P Sbjct: 6 MNVLERYIGKTILSAIFLTLFLLVGLGAIIKFVEEFKAVGK-GSYDALLAAYYTFLTIPR 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ +++ NL SELV+ +A G S +++ + ++ L +FT+++ Sbjct: 65 DVETFFPIAALLGSLLGLGNLASRSELVVMQASGFSRFRIGLAVMKTAVPLILFTMIIGE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ D+ + G + W + I + + S Sbjct: 125 WGVPQTEQYARDMRSVAQSGGSMLSTSGGFWARDGENFVYIRR------IGSETQLNNLS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI---PIDKNSTTLNIPIKMDGFQ 238 I K ++ A A ND LKKV + + I Sbjct: 179 IYHFDKKELKSITQAAEAKYTNDSWILKKVEKSTIEGNSIKQSKEKDQPWQTSITPSKLG 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F ++ R E F+ + P+ + M L+A S Sbjct: 239 IVSLKPESLSITGLADYVGFLKETGQ-DPKRFEITFWRKVYQPISMAVMMLLAISFIFGP 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GFM Y + + L ALIP ++ +S+ +L + Sbjct: 298 LRSSTMGAKIVIGIVAGFMFYVANIVFGNMSLIATWLPVSIGALIPSLICLSIVWWLLTK 357 Query: 358 KED 360 K D Sbjct: 358 KRD 360 >gi|188995335|ref|YP_001929587.1| hypothetical protein PGN_1471 [Porphyromonas gingivalis ATCC 33277] gi|188595015|dbj|BAG33990.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 363 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 121/350 (34%), Gaps = 2/350 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y K +L T ++ ++ + + V D+NE + + S VP Sbjct: 10 LDKYLIKQFLGTFVFSIILIISVSVVFDINEKIDDFMKPEVSLRSIIFDYYFNFVPYYAN 69 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P + I L SE++ + G+S +L+ P+++ + ++ I T L+ + + Sbjct: 70 LFSPLFVFISVIFFTSKLAEKSEIIAMLSAGVSFKRLMVPYMLSATVIAILTFLLNSFVI 129 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G ID ++ N Q ++ + + + + Sbjct: 130 PPGNATRIDFQNKYIKNKKVQYAESVQLEVKKGVFAFFGSYSDAMRTGYQFSLEEFKGKQ 189 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R D + + +Y + I ++ F + Sbjct: 190 LVSRLTADRIQYDSLYNWRIFNYRIR-HFGKYKETVESGSEMDTVIAVRPADFLVAEDDV 248 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + ++ +S + + + E + + +T+I AS+S + Sbjct: 249 ETMTTTDLHTYISHQKQRGVGNVKLFEIELHKRYAAIFSAFILTIIGASLSSRKVK-GGM 307 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I +A G+ F +T+ +F SG L P AA +P + +++ + Sbjct: 308 GINIAIGLGLSFAYILFMTVAGTFAISGSLPPFMAAWLPNFVFTVIAVFL 357 >gi|329962824|ref|ZP_08300709.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] gi|328529381|gb|EGF56294.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] Length = 378 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 121/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 21 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPYF 80 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ I T + + Sbjct: 81 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAIVTFSLGSY 140 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I+ ++ + I SN I D Sbjct: 141 VIPRGSVTRINFEDKYYKPRKANTARNIQLEVDSNVIAYIERFEDYSKTGYRFSLDKFRD 200 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A I+ +K + E + I K + + ++ F Sbjct: 201 KQLVSHLTARSITYDTASIHKWTIKDYMIREMDGMKESITKGDRIDTTLFMEPADFLIMK 260 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + + + E +++ I + +TLI S+S + ++ Sbjct: 261 NQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTK- 319 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F TI +F +G + PV A IP +L ++ + Sbjct: 320 GGMGLHLGIGLALSFSYILFQTIASTFAVNGNVPPVIAVWIPNVLYTFIAFYL 372 >gi|224539916|ref|ZP_03680455.1| hypothetical protein BACCELL_04827 [Bacteroides cellulosilyticus DSM 14838] gi|224518470|gb|EEF87575.1| hypothetical protein BACCELL_04827 [Bacteroides cellulosilyticus DSM 14838] Length = 391 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 121/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 34 KRLDFYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWKAIIFDYYLNFIPYF 93 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ I T + + Sbjct: 94 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAIVTFFLGSY 153 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I G I+ ++ + I S I D Sbjct: 154 IIPQGSVTRINFEDKYYKQRKSNTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFKD 213 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ +K + E + I K + + ++ F Sbjct: 214 KQLVSHLTARSITYDTASVHKWIIKDYMIREMDGMKENIVKGDRIDSTLFMEPADFLIMK 273 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + +S + + E +++ I + +TLI S+S + ++ Sbjct: 274 NQQEMMTSPQLSEYISRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTK- 332 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F TI +F +G + PV A IP IL ++ + Sbjct: 333 GGMGLHLGIGLALSFSYILFQTIASTFAVNGNVPPVIAVWIPNILYAFIAFYL 385 >gi|189465688|ref|ZP_03014473.1| hypothetical protein BACINT_02049 [Bacteroides intestinalis DSM 17393] gi|189433952|gb|EDV02937.1| hypothetical protein BACINT_02049 [Bacteroides intestinalis DSM 17393] Length = 378 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 121/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + VP Sbjct: 21 KRLDFYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMSHEAPWKAIVFDYYLNFVPYF 80 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ + T + + Sbjct: 81 ANLFSPLFVFISVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGSY 140 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I+ ++ + I S I D Sbjct: 141 VIPKGSVTRINFEDKYYKQRKSNTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFKD 200 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ +K + E + I K + + ++ F Sbjct: 201 KQLVSHLTARSITYDTASVHKWTIKDYMIREMDGMKENIVKGDRIDSILFMEPADFLIMK 260 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + E+ + +S + + E +++ I + +TLI S+S + ++ Sbjct: 261 NQQEMMTSPELSEYISRQRQRGFANIKEFELEYHKRIAMSFASFILTLIGVSLSSKKTK- 319 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F TI +F +G + PV A IP IL ++ + Sbjct: 320 GGMGLHLGIGLALSFSYILFQTIASTFAVNGNVPPVVAVWIPNILYAFIAFYL 372 >gi|148239646|ref|YP_001225033.1| permease [Synechococcus sp. WH 7803] gi|147848185|emb|CAK23736.1| Predicted permease [Synechococcus sp. WH 7803] Length = 388 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 114/366 (31%), Gaps = 14/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ L L+ + ++ + + + ++ + R+P + Sbjct: 18 LLDRWLIGELLSPLLFAIAAFTVVSLSVGVMFELVRQIVESGLPVAIAVQVLLLRLPSFL 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 TL+ ++ + L+ SEL R++G++ +++ P ++ ++L+ T + + + Sbjct: 78 VISFAMATLMATLLAYSRLSANSELTALRSVGVTATRMIVPALIVALLMSGLTFVFNDVV 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI---------FIGAKKILPENH 174 + +++ + QD + + + Sbjct: 138 VPRANRSAEITLRRALGKAIATEKGSNIVYSRFGRIQDPDGSSSKGLAQLFYARQFKDGV 197 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNI 230 + + D + K + D + + Sbjct: 198 MSGVTVLDFTRAGFTQMLVADRAVWNERQAKWQFFDGQILTLTPSGSTTSADFDQYLYPL 257 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLMLVAMTL 289 + + + + E ++ ++ R + + +P+ + L Sbjct: 258 SAAPIRIAQLPKDANNMTVAEALRARELLEQAGDIKEARRLQVRIQEKFTLPMACLVFGL 317 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 I AS+ + + + + Y + S G G L P+ AA PV+++++ Sbjct: 318 IGASLGAKPNSRTSRSQGFGISVVLILVYYVLSFSFSSLGVKGTLPPLLAAWSPVLISLA 377 Query: 350 LSILIL 355 +L Sbjct: 378 GGGWLL 383 >gi|124009520|ref|ZP_01694195.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] gi|123984866|gb|EAY24834.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] Length = 371 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 127/366 (34%), Gaps = 13/366 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L +Y K +L T + ++ + ++ +ID+ E ++ +P Sbjct: 1 MLKRLDKYILKKFLVTFFFVVIILISIIVIIDITEKIGDFNKMDQTVWQIFTKYYLNFIP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P + + + V L +E++ + G+S ++L P+++GS L+ + T +I Sbjct: 61 YWANSLSPILIFIATVFVTARLATHTEIIAILSSGVSFKRMLVPYLLGSSLIAVLTFYLI 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI----- 175 + ++ + + + N I Sbjct: 121 GWVIPKANRVRLKFENTHIKDKFYFTDRNVHLKIAPNTFAYIESYDNTSHVGYKFTLENI 180 Query: 176 -WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL------ 228 ++ KK L K ++ ++ R T Sbjct: 181 SGFEYDGKRQQKKLNSKVECRRILWDKDRKKWVMENYKITEFNRGDSLNYKITYGQSLDT 240 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMT 288 + +K F+ + ++ ++ + + + Y + P ++ +T Sbjct: 241 LMNLKPSDFESKYMFNEQLTSDQLEAYIAELKQRGVGKLETYLVERYERMAYPFAVIILT 300 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 +I VS +R + +A G F+ +I + +S GK+G L P+ AA +P IL Sbjct: 301 VIGVIVSSRKTREG-AGLQIAVGFGLAFIYVMLIMVSRSIGKNGELPPLVAAWMPNILFA 359 Query: 349 SLSILI 354 + +++ Sbjct: 360 LIGLIM 365 >gi|86608831|ref|YP_477593.1| YjgP/YjgQ family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557373|gb|ABD02330.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 370 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 124/362 (34%), Gaps = 12/362 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY F L L + G +L+ V L + ++ E + L +P ++ Sbjct: 10 LLERYLFGEMLTPVLAGVAGGTLLLLVGRLFTLAERLVE-GSVPPLTVLRLLVLDLPEMV 68 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P ++ L+ SE+ RA GI ++ P ++ + + + + N + Sbjct: 69 VLGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFSRIFRPLLLVGLAMSLSAFFISNVL 128 Query: 124 ATSGEKIGIDLIQQ--------WKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI 175 + ++ + QQ K++ W I + + Sbjct: 129 LPASKQQIRQIDQQALLAQATTPVQYDVFFKTEDNLWFFIRQVDPRLNTMQDVTILRVDP 188 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 ++ + + L + L + + Sbjct: 189 LPGGKYQLVEVTLAAQAVWNGLEWSLSEGATHLYGPTGLSIAEQTFHRK--PLQVSQDLA 246 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + S E+ +++S +SN + T+F+ +PL LI+ + Sbjct: 247 ALMQPPVPPSELSLPELAERISRLARSN-LNTQALRTEFHMRFSLPLASFFAVLISLPLG 305 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +R V +GI F Y ++++ +S G+ G L P AAA IL + +++L Sbjct: 306 STTARRVGRYGGVVFGILLVFGYYVVLSVSRSLGEVGALPPWAAAWSFNILFGGIGLVLL 365 Query: 356 LQ 357 + Sbjct: 366 AR 367 >gi|256425866|ref|YP_003126519.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] gi|256040774|gb|ACU64318.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] Length = 359 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 104/358 (29%), Gaps = 3/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I Y + ++ T +Y L+ +++ VID+ E + + +P Sbjct: 1 MTKI-DWYILRKFIGTFIYSLMILLVISVVIDVTEKIDDFMSNNLSFYTIVVDYYFGFIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + P + I + +E+V G+S + L P+ VG+ L G L Sbjct: 60 HIAALLFPLFIFISVIFFTSKMAYRTEIVAILCSGVSFRRFLRPYWVGAFLFGGLLWLGN 119 Query: 121 NPIATSGEKIGIDLIQQW-KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 KI ++ + S ++ + Sbjct: 120 RWTVPVANKIRTKFEAEYVHKKKAQLNMYDKTIRVDSFTYVTFGSYDPNYKSGSNFLYED 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 K R D + K TT+ IP+ + Sbjct: 180 VRGQNIKFKMKADRISWDSVAGKWKLDYVTMRAINGLKERWWSKTDTTIKIPLNPKEMYE 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + E+ ++ + Y +V +TLI ++ + Sbjct: 240 EKNIQEAMTTPELDTYIAREELKGAEGLNTFYVEKYRRTASSGAVVILTLIGGIIASKKV 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +A GI + F L P+ A IP L L+ + L+ Sbjct: 300 R-GGSGLHLAVGIVISASYIIFLQFSTVFSIKADLNPLLAVWIPNFLFGGLAFWLYLR 356 >gi|186681603|ref|YP_001864799.1| permease YjgP/YjgQ family protein [Nostoc punctiforme PCC 73102] gi|186464055|gb|ACC79856.1| permease YjgP/YjgQ family protein [Nostoc punctiforme PCC 73102] Length = 391 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 106/356 (29%), Gaps = 16/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + + + L ID + I + + P I Sbjct: 20 IMDRYLTSELIAPFFFGVGAFSSLGVTIDAVFDLVRKIVESGLPIDIAIQVFLLKFPNFI 79 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SEL+ R G+S+++++ V+ S+++ T + I Sbjct: 80 VLAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRIVLTAVMLSLVVTGMTFVFNEQI 139 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN---------PQQDIFIGAKKILPENH 174 A + + + + + + + Sbjct: 140 APAANYQAGVTLDKALKSDKPAFKQQNIFYPEYQDVIQPDGSKNRILTRLFYADQFDGKR 199 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLN 229 + K I ++ + Y + R + L Sbjct: 200 MTGLTIIDRSTKNLNQIVVSESAQWNPSQNIWDFYNGTIYFVAADRSYRNIVRFEHQQLQ 259 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 +P + S + + E + ++ R E + I +P + V Sbjct: 260 LPRTPLSLAEKSRDYGEMNISEALDQLQVEYLGGDRQKIRKLEVRIQQKISLPFVCVVFG 319 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 L+ A++ R+ + + F Y I I + ++G L P A +P Sbjct: 320 LVGAAMGSIPQRTGR-GTSFGISVVVIFSYYLIFFISGAIAQAGALSPFMGAWLPN 374 >gi|220907915|ref|YP_002483226.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] gi|219864526|gb|ACL44865.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7425] Length = 389 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 118/369 (31%), Gaps = 10/369 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 +P +L RY L ++ + + + + Q +S L ++P Sbjct: 19 LPLLLDRYVLSALLTAFVFSVAAFTGIGVAVGVVFDLVQDFADAQIPLSLLLQLLWLQLP 78 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I +P L+ ++ F L+ SELV +++G+ I++L+ P V+ +L+G Sbjct: 79 YTISFCLPLGVLLASLSTFNRLSADSELVALQSVGVGIYRLVLPVVLFGLLVGGLAFGFN 138 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + L+Q+ G + P ++I + T Sbjct: 139 TSLVPASRSQSSQLLQEVVQQGQAVTQAQNIFYPEYGPDREIQRLFYARQFDGQQMYGLT 198 Query: 181 SITIDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLNIPIKM 234 + + ++ + Y R + L IP Sbjct: 199 VLDFSQTGVNQVITAESAVWDSTISVWTFTNGTIYLVDADGSYRNILQFTEQQLQIPRDP 258 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLIAAS 293 + S E + + R + IP + + LI A Sbjct: 259 LALATPKPSISEMSLAEARRYLEQLQPDGDPREIRKLQLYIQQQYAIPWQGLILGLIGAG 318 Query: 294 VSLEF-SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + ++ R + F Y + + + +SG L P+ AA L + +++ Sbjct: 319 LGIKSQPRRKSRGF--GLSLVIIFAQYVLSFLTAALARSGGLSPLVAAWSVNGLGLGVAL 376 Query: 353 LILLQKEDG 361 +LL+ G Sbjct: 377 WLLLRAAHG 385 >gi|163756243|ref|ZP_02163358.1| hypothetical protein KAOT1_06887 [Kordia algicida OT-1] gi|161323855|gb|EDP95189.1| hypothetical protein KAOT1_06887 [Kordia algicida OT-1] Length = 359 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 126/357 (35%), Gaps = 4/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T LL + + ++D++E ++M + V Sbjct: 1 MKILDWYIIKKYLLTFSVMLLLFVPIGIMVDISENIDKMLASK-APTDEIVLYYVNFVIY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + G+S + L PF+V + ++ I ++ Sbjct: 60 FANLLFPIFLFLSVIWFTSKLANDTEIIAILSSGVSYLRFLRPFLVAASIVAIVAFVMGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + K + ++ G K+ D + + I++ + + Sbjct: 120 YIVPNASKGFNEFRFEYIKKGRKKVRDNLEIYKQVTENDFIYLKSFSFDSKRGDNFTLEH 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + I + + KK + +++ P ++D Sbjct: 180 FEDNVLEYKIQARSIKYNEDDSTYTLRGFKKRIVGAMNDSLVNQRKFDTIFPFEVDDLTP 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + ++ E+ K ++ +S + + Y +P+ +T+IA +VS Sbjct: 240 VTYMAETLNYQELDKFIAKEKQSGSPNVNKHLLVKYKRWSLPITAFILTIIAVAVS-SMK 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R +A+GI F+ I + + P+ A +P ++ L++ +L Sbjct: 299 RRGGMGFNLAFGIAIAFIYIFFDKIFGTMAEKSGFSPMLAVWVPNLVFGVLALYLLY 355 >gi|296137010|ref|YP_003644252.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] gi|295797132|gb|ADG31922.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] Length = 365 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 126/364 (34%), Gaps = 10/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + R+ + L L + L+F ID+ + +G+ P +S+S + A +P Sbjct: 1 MRTVRRFLLLHVLSAVGLVTLAFLALLFFIDMLNDLSNLGK-PGFSLSGTLLHVALSMPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P TLV + +L +SE I R G+S L + + L + L+ Sbjct: 60 RAYEVLPIATLVGGVFALASLAASSEFTILRISGLSPRAALGLLLQLAAALVVTLFLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + ++ L +G + W++ + + K + D Sbjct: 120 WLAPAAGQLSARLQA-GGGSGIGTQLASGVWLRNDSDRSGNQTVNIKAINTRGDLTDIHI 178 Query: 182 ITIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGRIP------IDKNSTTLNIPIKM 234 ++ + +I A L+ V + + I S + Sbjct: 179 YVLNAQAQIAAELHAPSGQYEGGGTWMLQNVTRTELPQQTGAALKVIQLPSYRWRTSLSP 238 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 S ++ + + +N R E Q + + P V M L+A Sbjct: 239 SVLGVLLLSPDKMSAIDLWRYIQHLR-ANHQAAERYEIQLWKKLFYPFSAVVMLLLALPF 297 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +RS V GI G + T+ S G G P A +P++L L +++ Sbjct: 298 AYLHTRSKGVSGKVLAGIVLGIAFILLNTLFSSLGILGTWPPAITAAMPMLLFGGLGLIV 357 Query: 355 LLQK 358 + Sbjct: 358 FAWQ 361 >gi|302342716|ref|YP_003807245.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] gi|301639329|gb|ADK84651.1| permease YjgP/YjgQ family protein [Desulfarculus baarsii DSM 2075] Length = 397 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 115/363 (31%), Gaps = 11/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I+ RY + + L ++ + + E+ + + + L +P Sbjct: 4 PRIIHRYLLREMIGPFFISLGVFTFMLLIAKIMELTDLVVSR-GVGLDVVGRLLLYTLPY 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IP TL+ ++ F ++ E+V +A G+S + L P V +I + T + Sbjct: 63 FFVFTIPMATLLGVLLAFLRMSGDMEVVALKAAGVSPYAFLPPVAVLAICAWLVTSALAF 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 G +L+ Q +M ++ Sbjct: 123 WGLPWGNHRFENLVFQVAKAQTDLALKERVFMDTFPGMVIYISRLPGQGQMTDLFIVDER 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG----- 236 + R A ++L + G+ + Sbjct: 183 EKGRHHTIVAKRGKIFPANNDRLILRLYDGTIHSVGQNLRSAQTAAFVTYDIAVDASTLS 242 Query: 237 --FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 Q+ ++ F E++ +M ++ +Y E + + +P + M LI + Sbjct: 243 AAHQRTTKHEKEMYFGELLAEMDKL-PADSMQHYLIEMEMHKKFSVPFACLVMALIGLPL 301 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + VA + Y +++ SFGK+G P+ P +L +L++ + Sbjct: 302 GMHS--RGGRSWGVAIALVVFLGYYLMLSAAWSFGKTGDYPPIVGMWAPNLLLGALAVEL 359 Query: 355 LLQ 357 + Sbjct: 360 FRR 362 >gi|32035302|ref|ZP_00135309.1| COG0795: Predicted permeases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208576|ref|YP_001053801.1| hypothetical protein APL_1104 [Actinobacillus pleuropneumoniae L20] gi|165976526|ref|YP_001652119.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150429|ref|YP_001968954.1| hypothetical protein APP7_1160 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250151|ref|ZP_07336353.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253324|ref|ZP_07339473.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248124|ref|ZP_07530152.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252739|ref|ZP_07534630.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257155|ref|ZP_07538927.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261583|ref|ZP_07543251.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263772|ref|ZP_07545378.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097368|gb|ABN74196.1| hypothetical protein APL_1104 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876627|gb|ABY69675.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915560|gb|ACE61812.1| hypothetical protein APP7_1160 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648006|gb|EFL78213.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651214|gb|EFL81368.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855301|gb|EFM87476.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859771|gb|EFM91793.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864317|gb|EFM96228.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868706|gb|EFN00515.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870893|gb|EFN02631.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 360 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 139/363 (38%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + LL + LVF+I L E +G+ +Y + +P Sbjct: 6 MNILERYIGKTIITMIFAVLLMSSGLVFIIKLVEEFKDVGK-GSYDALTATYYSLLMLPS 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I++ IP + L+ ++ NL SELV+ ++ G S +++ + +I L +FT+LV Sbjct: 65 DIKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + G + W + N I EN + S Sbjct: 125 WGIPQTEQYARNMRSIAQSGGSMLSTKGGFWAKDGNDFIYIRH------IENERKLNNVS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQ 238 I + + AD A+ + L++V + + I Sbjct: 179 IYHFEDKALKSVTQADNAVFNGENWTLQRVQTSSLADNSIQQAKEVNKDWQTTITPSKLG 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F ++ + R + F+ + P+ + M L+A S Sbjct: 239 IVSLKPESLSISGLSDYVGFLKETGQ-DSKRFQIAFWRKVYQPISMAVMMLLAISFVFGP 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GF+ Y + + + ALIP ++ +S+ +L + Sbjct: 298 LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTK 357 Query: 358 KED 360 K D Sbjct: 358 KRD 360 >gi|113953439|ref|YP_730497.1| membrane protein, YjgP/YjgQ family protein [Synechococcus sp. CC9311] gi|113880790|gb|ABI45748.1| putative membrane protein, YjgP/YjgQ family protein [Synechococcus sp. CC9311] Length = 392 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 113/366 (30%), Gaps = 14/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ + L+ L ++ + + + N + + ++P + Sbjct: 22 LIDRWLLGELIGPLLFALTAFTVVSLSVGVMFDLVRKIVESNLPWTIAVQVLLLKLPSFL 81 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ +++ + L+ SEL R++G++ +++ P + ++L+ + L + I Sbjct: 82 VISFPMATLMASLLAYSRLSANSELTALRSVGVTASRMIAPAIALALLMTSLSFLFNDVI 141 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP---------QQDIFIGAKKILPENH 174 + +Q+ + + + + + Sbjct: 142 VPRTNRSAEFTLQRALGKAIAAEKGDDIVYSRFGRVAEPDGKSSKGLTQLFYAREFEDGT 201 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNI 230 + + D K + D + + Sbjct: 202 MIGVTVLDLSRFGFTQMLVADKAKWNQSQAKWEFNDGQILTLTPSGSTTSADFDRYLYPL 261 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTL 289 K + + + E I+ + + R + +P+ + L Sbjct: 262 SPAPLRIAKLPKDANNMTVSEAIEAEQLLSDAGDRKEARRLRVRIQEKFTVPMACLVFGL 321 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 I +S+ + + + F+ Y + S G G L P AA PV+++++ Sbjct: 322 IGSSLGAKPNSRTSRSQGFGISVVLIFVYYVLSFSFSSLGVKGTLAPFLAAWGPVLISLA 381 Query: 350 LSILIL 355 ++L Sbjct: 382 GGGVLL 387 >gi|321222550|gb|EFX47622.1| putative Permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 336 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 115/337 (34%), Gaps = 3/337 (0%) Query: 23 GAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNL 82 + L +I + + G+ NY + VP IQ P L+ ++ L Sbjct: 1 MLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPKDIQIFFPMAALLGALLGLGML 59 Query: 83 NRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNG 142 + SELV+ +A G + Q+ + +I L + T+ + +A GE++ + Q G Sbjct: 60 AQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGG 119 Query: 143 DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIY 202 + W + N I F + + D Sbjct: 120 SLLSTQQGLWAKDGNNFVYIERVKGDEELAGISIYAFNDQRRLQSVRYAASAKFDPEHKV 179 Query: 203 NDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNK 261 ++ + +I + S T + D + + S + + + Sbjct: 180 WRLSQVDESDLQNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKS 239 Query: 262 SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI 321 S R + + I PL + M L+A S RS + V GI GF+ Y + Sbjct: 240 SGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVL 298 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 I + P+ AL+P +S+ ++L+K Sbjct: 299 DQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 335 >gi|226227979|ref|YP_002762085.1| hypothetical protein GAU_2573 [Gemmatimonas aurantiaca T-27] gi|226091170|dbj|BAH39615.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 362 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 119/354 (33%), Gaps = 4/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + + +LG +LVFVIDL + + E A+ +P + Sbjct: 9 LDRYIATEFTRIFGVTILGFPVLVFVIDLVDNLRKYTERK-LPAKAVALSYFYWIPDTLF 67 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P L + R SE+ ++A GIS ++ + P +V + L + Sbjct: 68 MVLPAAVLFATVFSIGTFTRYSEITAAKASGISFYRFIAPILVMATLALGLDLAFGEIAP 127 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + L + + + + + K + I + Sbjct: 128 PANAIRLDLLEGTSSSRANDRYNFAFASDRGRIYRIYTLNVRDKAVDNIEIEARGSDKKP 187 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST-TLNIPIKMDGFQKFSEQ 243 K D + + ++ + I +S + + Sbjct: 188 GMVVAARRAKWNDARRDWRLDSGVVHIIPDRTRDIAFSFDSLIDRDFHETPAELRTTERD 247 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + F ++ + ++ +S + + I IP+ + + L A ++ R Sbjct: 248 PSEMRFADLTRFITVLERSGA-DVNTLKVERMLKIAIPVTCLIIALFGAPLATSSQR-GG 305 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A + + + +I + K+ G GI+ P AA IP + +I++L + Sbjct: 306 AAYGIAVSLATTVLFLLLIQLTKAIGGKGIVEPELAAWIPNAVVGLFAIVLLSR 359 >gi|86609743|ref|YP_478505.1| YjgP/YjgQ permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558285|gb|ABD03242.1| putative permease, YjgP/YjgQ family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 362 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 115/358 (32%), Gaps = 10/358 (2%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y FK ++ + G +++ L + + + + +P I+ Sbjct: 4 YLFKEMIRPFFLGVAGGTVMMLGNQLFIYTDLLVKK-GAPPLTILHILLLNLPAILVVTF 62 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P L ++ + SE+ RA GI ++ P + +L+ +L I Sbjct: 63 PIAGLFTTLLTLGKMGADSEITALRAAGIPYRKVFIPVLCIGLLISGLALLTNEVIVPET 122 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + L + D + +++ + Sbjct: 123 NQKVKILNKNLILAQDALLFNPEEIVRVDDDLWFHVGSIDPKTGLMQDLLILDRKAETGH 182 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPI--------KMDGFQK 239 + A A +L+ VV +Y + + +K Sbjct: 183 LRYPQVISAQTAQQVGQSWQLRDVVIRRYDEQGRTYYEGQVEEMQLNIVNKLVGLVYAEK 242 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ + +E ++ + + R T+++ IPL L+AA + L+ Sbjct: 243 VPQEQRAGELWEQCQRYR-AEQRPSADVARCLTEYHLKFAIPLASFFAILVAAPLGLQTV 301 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R VA I F+ Y ++++ ++ G+ + P AA +P ++ + +L + Sbjct: 302 RQTGRYGGVALAIVLVFIYYVLMSLGRAMGRVEHIDPWLAAWLPNMIFGGVGFSLLWR 359 >gi|325269119|ref|ZP_08135739.1| hypothetical protein HMPREF9141_0948 [Prevotella multiformis DSM 16608] gi|324988506|gb|EGC20469.1| hypothetical protein HMPREF9141_0948 [Prevotella multiformis DSM 16608] Length = 405 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 118/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GIL Y + ++ T +Y +L + + V D NE ++ + + A +P Sbjct: 46 GILDWYIIRKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYY 105 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+SI +L+ P+++ +L+ T + + Sbjct: 106 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIKRLMRPYMISCVLIAGLTFYLNSF 165 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + ++++ ++ + N I + Sbjct: 166 VIPHGTVIRQNFESLYRNSKKNTSAENVQLYVSKNTTAYIQHYDNQYKRGYGFSLVKIKD 225 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQK 239 + D +L + S + ++ Sbjct: 226 KKIVSHMTAMEIQYDTVADTKFHWRLSNWKTRTLKGLKEHIQSGASKDTVLLMEPTDLVY 285 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E++ +S + + E +F+ I + +T+I S+S Sbjct: 286 SKGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSLSSR-K 344 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F P+ AA IP I+ ++ Sbjct: 345 RKGGMGLYLGIGLALSFSYIMLQTVSSTFAIQSDTPPLLAAWIPNIIFAVIAYF 398 >gi|307246020|ref|ZP_07528102.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255001|ref|ZP_07536819.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259437|ref|ZP_07541162.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852955|gb|EFM85178.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861874|gb|EFM93850.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866373|gb|EFM98236.1| Lipopolysaccharide export system permease protein lptG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 360 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 139/363 (38%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + LL + LVF+I L E +G+ +Y + +P Sbjct: 6 MNILERYIGKTIIAMIFAVLLMSSGLVFIIKLVEEFKDVGK-GSYDALTATYYSLLMLPS 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I++ IP + L+ ++ NL SELV+ ++ G S +++ + +I L +FT+LV Sbjct: 65 DIKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + G + W + N I EN + S Sbjct: 125 WGIPQTEQYARNMRSIAQSGGSMLSTKGGFWAKDGNDFIYIRH------IENERKLNNVS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQ 238 I + + AD A+ + L++V + + I Sbjct: 179 IYHFEDKALKSVTQADNAVFNGENWTLQRVQTSSLADNSIQQAKEVNKDWQTTITPSKLG 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F ++ + R + F+ + P+ + M L+A S Sbjct: 239 IVSLKPESLSISGLSDYVGFLKETGQ-DSKRFQIAFWRKVYQPISMAVMMLLAISFVFGP 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GF+ Y + + + ALIP ++ +S+ +L + Sbjct: 298 LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTK 357 Query: 358 KED 360 K D Sbjct: 358 KRD 360 >gi|238023197|ref|ZP_04603623.1| hypothetical protein GCWU000324_03124 [Kingella oralis ATCC 51147] gi|237865580|gb|EEP66720.1| hypothetical protein GCWU000324_03124 [Kingella oralis ATCC 51147] Length = 355 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 128/361 (35%), Gaps = 11/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY K + Y L + L IDL + +G+ Y++ ++P Sbjct: 1 MNLITRYLIKRLAVASCYALFAILALYSFIDLISETSVVGQNQ-YTLWVATQYILMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q++P TL+ +V L SEL + + G+S ++ + S + I TVL+ Sbjct: 60 RAYQLMPLATLIGGLVALNQLANNSELAVIKTSGLSTANIIGIIIKFSAIFAIATVLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + G ++ + W++ ++ + ++ Sbjct: 120 WLAPELSRRGDEMKANARAGHIAAAH-NGIWIKQPGSMINV-----ASMLPDNTLVGIKI 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQ 238 + + ++ A+ A + N +L P + I Sbjct: 174 WHYNDQFQLTEAISAEKATVANGAWQLHNTHSTTLADNHAQPQQQAEREWQTDIGKPLLN 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + SF + + + + + N + ++ ++ P+ + M L+A + + Sbjct: 234 VLLVKPEQMSFTALTQYIRYLKE-NHQQTQAYDVAWWNKLIYPIATMVMALVALAFTPNS 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + GI G + + + + + + +A++P ++ ++ ++ Sbjct: 293 GRHSNMGLKLFGGICLGLLFFFTGRLFGFTTQLYGVPAMLSAILPTAAFGCWAMYLIRKQ 352 Query: 359 E 359 E Sbjct: 353 E 353 >gi|312131567|ref|YP_003998907.1| permease yjgp/yjgq family protein [Leadbetterella byssophila DSM 17132] gi|311908113|gb|ADQ18554.1| permease YjgP/YjgQ family protein [Leadbetterella byssophila DSM 17132] Length = 360 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 121/356 (33%), Gaps = 4/356 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I RY K +L T ++ + ++++ VID E + E + + P Sbjct: 1 MTKI-DRYLIKRFLTTYVFAVFIIVLVILVIDFVEKNDDFMETKPSNHAIFFDYYLNLAP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P + + + + +E++ G S +L+ P+ +GS ++ I++ +++ Sbjct: 60 YWANYISPLMIFISTVFFTAKMASHTEIIAILGSGTSFRRLMLPYFIGSGIVAIYSFVMV 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I+ ++ N I N + + Sbjct: 120 GWFLPKANVPRIEFENKYIHNDFFFTGRDIHLAVQKNVYAYLSSYDNSSNTAYDFTLEKV 179 Query: 181 SITIDKKNKIIHRKDADLAIIYND--KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + R D ++ ++K+ + +I + F Sbjct: 180 ENNRLVEKLSARRATYDDSLKKWKLYDYNIRKIGISKDEMTYEAITPLDTSIKLYPSDFG 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + ++ + N + ++Y P ++ ++++ VS Sbjct: 240 NSKNRQETMTISQLEDYIDLINSRGAEGVETYKIEYYQRFATPFAVIILSIMGLIVSARK 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +R + +A G F+ + K ++G + P+ A +P I+ +S+++ Sbjct: 300 AR-GGVGLQIAIGFVLAFLYIIFYILSKGIAEAGSMNPILAVWLPNIVFSIISVVM 354 >gi|288928388|ref|ZP_06422235.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] gi|288331222|gb|EFC69806.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] Length = 390 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 115/354 (32%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL Y + ++ T ++ +L + + V D+NE + + + A VP Sbjct: 31 KILDWYIIRKFIGTYVFSILLIISIAIVFDVNENLAKFTQFHAPLKAIVFDYYANFVPYF 90 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L TSE++ A G+S +L+ P++V +L+ + + Sbjct: 91 ANLFSPLFVFIAVIFFTSKLAGTSEIISMLAAGVSFNRLMRPYMVSCLLISCLSFYLSGY 150 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +K++ ++ + I K D Sbjct: 151 VIPHGTVIRQNFESMYKNSKKNTSAENVQLQVDRGVIAYIQHYDDKTKRGYGFSLDKFEN 210 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQK 239 + D ++ + + + I ++ Sbjct: 211 KKLVSHMTASEIQYDTISDSKYHWQVSNWRIREMKALREKITYGDKRDTLIMMEPADLVF 270 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + E +++ I +T I S+S Sbjct: 271 SKGQQETFTNPELSSYISKQIGRGSSNVVQYEVEYHKRIAASFASFILTTIGLSLSSR-K 329 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + P+ AA IP +L ++ Sbjct: 330 RKGGMGLYLGIGLALSFGYILLQTVSATFAVNANTPPMLAAWIPNLLFAVVAYF 383 >gi|33240287|ref|NP_875229.1| putative permease [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237814|gb|AAP99881.1| Unclassified ABC-type transport system permease [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 403 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 113/375 (30%), Gaps = 15/375 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L R+ F+ L + + ++ + + + ++ + ++P Sbjct: 29 MIPLLDRWLFRELLPPFFFAISAFTVVSLSVGVMFDLVRKIVESGLALKFALQVFFLKLP 88 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P L+ ++ F L+ SE+ ++IGIS +++ + +L+ T + Sbjct: 89 SFLVISFPMAILMATLLTFSRLSSNSEVKALKSIGISTKRMIVAAITLGLLMTGITFIFN 148 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS----------NPQQDIFIGAKKIL 170 + I S K +++ + + K Sbjct: 149 DLIVPSANKSAEATLRRGLGVSMHSDYVTDIMYSRFGKIVDPSSNISRDGMTHLFYAKEF 208 Query: 171 PENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNST 226 + + K + + I + Sbjct: 209 QNKTMIDVTLLDFSRLGYKQMLVAKKGYWNNLEANWEFHDGNILTIAPNGGSTSISFENY 268 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLMLV 285 + K + + + K S R E + +P+ V Sbjct: 269 VYPLDSGPKKIAKIPKDANYMTLSDAYKAKDLYKLSGNLKEVRRMEVRIQEKFTLPMACV 328 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 +LI +S++ + + A I Y + + S G SG L P A PVI Sbjct: 329 VFSLIGSSLACSPNTRSTQGQGFALSIVLILAYYILSFVFSSLGVSGALSPFVGAWSPVI 388 Query: 346 LTISLSILILLQKED 360 +++S + +L + +D Sbjct: 389 ISLSGGLYLLNKADD 403 >gi|294678215|ref|YP_003578830.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477035|gb|ADE86423.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 366 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 79/367 (21%), Positives = 149/367 (40%), Gaps = 11/367 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y + + + L ++F+I++ E ++ +S A LAA VP + Sbjct: 2 TLSLYIARRFGQAFLIVAGAFWGVLFLIEMVEQIRRLDPARGA-LSDAAHLAALSVPSTL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I P + ++ +V F L R+SELV+ RA G S ++L V ++L+G+ V V NPI Sbjct: 61 YTIFPLVVMLSGVVAFLGLARSSELVVIRAAGRSALRMLLAPVTVALLIGVLLVAVGNPI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDK--QKSDIIPWMQISNPQ-QDIFIGAKKILPENHIWEDFT 180 ++ K ++ Q + G + WM+ I A + + T Sbjct: 121 VSATSKRAEEIEGQLRAEGRQTVSIGREGLWMRQGTADGGQAVIHAMRGNADATALYQVT 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------QYGRIPIDKNSTTLNIPIKM 234 + D K + R DA A + L + ++ R + +L + Sbjct: 181 FLLFDAKAGPVRRIDAASAWLTPGAWVLSEAKDWPLGRSTNPERDATRAQTISLPSTLTA 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + ++ +E+ + + F R + PLML AM L+AA Sbjct: 241 ESIADSFGAPSAMPIWELPGFIRALEAAG-FSARRHIVWLQVELAQPLMLAAMVLVAAGF 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ +R V + +G L+ + + + G +G + AA P + + L++ + Sbjct: 300 TMRPARFGGTGGRVMLALLAGLALFFLRNVAQVLGDNGQIPAALAAWAPPAIALMLALTL 359 Query: 355 LLQKEDG 361 +LQ+E+G Sbjct: 360 VLQQEEG 366 >gi|91203264|emb|CAJ72903.1| hypothetical protein kustd2158 [Candidatus Kuenenia stuttgartiensis] Length = 357 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 121/356 (33%), Gaps = 5/356 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K + T LL +IDL + + E+ S + A P Sbjct: 1 MFSRLDRYLLKAFFPTFFLCLLIISGTYVIIDLLQKLDDFLEMGINSFGVASRYYAYLFP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +II Q P ITLV +V L+R E++ + GIS++++L P V ++ +G + Sbjct: 61 VIITQFFPAITLVAVGIVLVRLSRNKEILAMQVAGISLYRILLPIFVVTVFMGFASFGDQ 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + ++ + N + I I + Sbjct: 121 EWIVP----RFAEKLEAMQQNTFDSDVQRNLLVHDDENNALIRIWKYSNKTQKMDSVFIL 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S + K + I N V K + R L+ + Sbjct: 177 SRDENGKKRFTLNAKKAEWIGNNTWVLSKILKHVYDERGRWVAPVHRLDTLEFVSSVTPL 236 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + N + + F+ I L + + + + + F R Sbjct: 237 ELGKKKLDSSLLSLEQLNELCEKEPDNPKNKVLFHSRIAYTLTHIVLLFLGIPLVVGFER 296 Query: 301 -SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 S + V+ I + + Y + I + G +G++ PV AA +P++L S+ I Sbjct: 297 MSKNIFLRVSLCILACGVFYAVSFICSNLGNTGMVHPVLAAWMPIVLFGSVGIFFF 352 >gi|332879242|ref|ZP_08446939.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682662|gb|EGJ55562.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 368 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 109/353 (30%), Gaps = 4/353 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y K +L T + + + + V D NE ++ A VP Sbjct: 11 LDMYLIKKFLGTYFFSIALIISIAVVFDFNENIDKFTTNHAPWKGIIFEYYANFVPYFSN 70 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P + I L SE++ A G+S +L+ P+++ + ++ + T L+ + Sbjct: 71 LFSPLFVFISVIFFTSKLAENSEIIAMMAAGMSFKRLMRPYMISAAIIAVMTFLLGAYVI 130 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G ++ +K + + + + I + H D Sbjct: 131 PKGSVTRLNFENIYKKKKKTEFAQNVQLQVDTGVIAFIEHFDGRTKTGYHFSLDKFVNKK 190 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQKFS 241 + D ++ + + + I ++ F Sbjct: 191 LVSHLTAASVSYDTLSDERYHWRINNYTLRELKGMREYISHGSRIDSIIAMEPSDFLLTR 250 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + E+ + + + E ++ P +T+I S+S R Sbjct: 251 NQQETLTSPELKEYIVKQRARGSGNVKPFEVEYQKRFATPFASFILTIIGLSLSAR-KRK 309 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ T+ +F + P AA +P I+ ++ + Sbjct: 310 GGMGLYLGIGLALSASYILFQTVSSTFAINADWPPALAAWLPNIIFAFIAFFL 362 >gi|260592209|ref|ZP_05857667.1| putative membrane protein [Prevotella veroralis F0319] gi|260535843|gb|EEX18460.1| putative membrane protein [Prevotella veroralis F0319] Length = 405 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 119/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GIL Y K ++ T +Y +L + + V D NE ++ + + A +P Sbjct: 46 GILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYY 105 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+SI +L+ P+++ +++ T + + Sbjct: 106 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSIKRLMRPYMLSCVVIAGLTFYLNSF 165 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + ++++ ++ + N I + Sbjct: 166 VIPHGTVIRQNFETLYRNSKKNTSAENVQLFVAKNTTAYIQNYDDQYKRGYGFSLVKIKN 225 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN---IPIKMDGFQK 239 + D KL + S T + ++ Sbjct: 226 KKIVSHLTAMEIQYDTIADSKYHWKLSNWKIRTLKGLKEHIQSGTTKDTVLLMEPTDLVY 285 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E++ +S + + E +F+ I + +T+I ++S Sbjct: 286 SKGQQETFTSPELLDYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLALSSR-K 344 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F PV AA IP I+ ++ Sbjct: 345 RKGGMGLSLGIGLALSFSYIMLQTVSATFAIQDNTPPVLAAWIPNIIFAIIAYF 398 >gi|33591556|ref|NP_879200.1| hypothetical protein BP0325 [Bordetella pertussis Tohama I] gi|33571198|emb|CAE40702.1| putative membrane protein [Bordetella pertussis Tohama I] gi|332380956|gb|AEE65803.1| hypothetical protein BPTD_0320 [Bordetella pertussis CS] Length = 392 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 65/370 (17%), Positives = 121/370 (32%), Gaps = 20/370 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + ++ LL + L L + + +G+ +S+ + A +P + + Sbjct: 6 RYLAREIYRSCAVVLLALLGLFTFFALVDDLDNVGDK--FSMLALFYMQALALPTRLYDL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +LL V +I L I L+ + + Sbjct: 64 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMRLLGMLWVITIPLMIGATLLSEFVTPA 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + ++ + + W + PQ I K L + +D T Sbjct: 124 AEIKSGEADLTFRGKTGGGRLNSGYWFKEPTPQNGTRIINIKTLLADGQVKDVTLYEFRS 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----------------DKNSTTLN 229 ++ A + L V E + L+ Sbjct: 184 DLEMTALWTAPNGRFSRGDLVLTDVSETRIDEHAPSALADAKQPKEPPARVTKVPELKLD 243 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S ++ + + N R + +V P L+ M Sbjct: 244 TTLSPERLLARVLTPERMSALTLVDYIEYLRH-NQLQYDRQVVALWRKLVYPFTLLVMIT 302 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 IAA + +R V GI G + + + + G P AL P + + Sbjct: 303 IAAPIGFMQTRRGGVGAKVFIGILLGVGFFMLNQLALNVGMLSRWPPWITALGPNLGALL 362 Query: 350 LSILILLQKE 359 L+ L E Sbjct: 363 LAFGALSMME 372 >gi|319762859|ref|YP_004126796.1| permease yjgp/yjgq family protein [Alicycliphilus denitrificans BC] gi|317117420|gb|ADU99908.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans BC] Length = 366 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 119/370 (32%), Gaps = 17/370 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + R ++ + + L + L F DL + +G Y +S + A +P Sbjct: 1 MKTIRRLIYREVIVGVAFVTLAFLALFFFFDLVDELRWVGS-NGYRMSHALLFVALSLPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I V L ++SE I R G+ W+ L+ + T V + Sbjct: 60 HLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLTLGCAFVALTFAVGD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE-NHIWEDFT 180 +A E+ + Q G W++ + + + P+ + Sbjct: 120 YLAPISERAAALVRAQQL--GQISTGATGAWLKERQGDHSFAVNVRALTPDGHMRDVRVF 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY--------QYGRIPIDKNSTTLNIPI 232 + D L++V + + L+ I Sbjct: 178 EFDARGRVASTTVAAQATFDDSGDAWNLEQVKRSVFEQRPNGDIRVTRRQEPTLLLHTRI 237 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 D + + + + + R E +F+ + PL + M +++ Sbjct: 238 SPDMVAASLLKPDKMATIGLFHYIRHLEANGQ-SAQRYEIEFWRKVFYPLSCLVMVVLSL 296 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + RS V G+ +G + + + G P A P ++ LS+ Sbjct: 297 PFAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSLLSL 356 Query: 353 ----LILLQK 358 ++L++ Sbjct: 357 AAFGWLVLRR 366 >gi|237736827|ref|ZP_04567308.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420689|gb|EEO35736.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 360 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/362 (11%), Positives = 114/362 (31%), Gaps = 7/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y K ++K+ + L+ M + V L + + + ++ T +P Sbjct: 1 MKIIDKYISKNFIKSFMLSLMAFMGIFIVSQLFRVVKYLSD-GRFTPGDAVYYIITLLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L+ +++ ++ E++ + GI +++ ++ S ++ V + Sbjct: 60 TFIDVAPLAVLLGSMMTISSMASNLEIISLKTSGIKFRRIVLFPIIISAIISGVVFFVND 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + KI DL +++ + + + Sbjct: 120 TLYPISLKINRDLRSGEVQKRVAPLEKRNAFLRGEDSNYIYLMQKVNRETGFAENIEIVD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP----IKMDGF 237 + + + KV + K V YG + + F Sbjct: 180 LNKSFDKIERIITAPEGRYNFGKKVWMLKDVNIYYGDDNKKPETKEFFSDSKYGDNPEHF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + ++ K + + P ++ + ++ Sbjct: 240 ITLTVEPRTLTIKDLKKTIREMKSIGG-DTRELLVELGNRYSFPFASFVISFLGLALGGR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + R + + + G+ Y + ++ +G L P IP I+ + + I +L + Sbjct: 299 YVR-GTSAVSLGICVLLGYGYYVVQASFEALSANGFLNPFVGGWIPNIMFLVVGIYLLNK 357 Query: 358 KE 359 E Sbjct: 358 AE 359 >gi|330824939|ref|YP_004388242.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] gi|329310311|gb|AEB84726.1| permease YjgP/YjgQ family protein [Alicycliphilus denitrificans K601] Length = 366 Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 119/370 (32%), Gaps = 17/370 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + R ++ + + L + L F DL + +G Y +S + A +P Sbjct: 1 MKTIRRLIYREVIVGVAFVTLAFLALFFFFDLVDELRWVGS-NGYRMSHALLFVALSLPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I V L ++SE I R G+ W+ L+ + T V + Sbjct: 60 HLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGLGPWRALSTLLALGCAFVALTFAVGD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE-NHIWEDFT 180 +A E+ + Q G W++ + + + P+ + Sbjct: 120 YLAPISERAAALVRAQQL--GQISTGATGAWLKERQGDHSFAVNVRALTPDGHMRDVRVF 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY--------QYGRIPIDKNSTTLNIPI 232 + D L++V + + L+ I Sbjct: 178 EFDARGRVASTTVAAQATFDDSGDAWNLEQVKRSVFEQRPNGDIRVTRRQEPTLLLHTRI 237 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 D + + + + + R E +F+ + PL + M +++ Sbjct: 238 SPDMVAASLLKPDKMATIGLFHYIRHLEANGQ-SAQRYEIEFWRKVFYPLSCLVMVVLSL 296 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + RS V G+ +G + + + G P A P ++ LS+ Sbjct: 297 PFAYLHFRSGGIAGYVFGGVMAGISFFLLNNVFGFAGNLQNWSPWLTAAAPGLIYSLLSL 356 Query: 353 ----LILLQK 358 ++L++ Sbjct: 357 AAFGWLVLRR 366 >gi|311694208|gb|ADP97081.1| permease YjgP/YjgQ family protein [marine bacterium HP15] Length = 345 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 118/350 (33%), Gaps = 11/350 (3%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + ++ + L + + + NY I +P I +P Sbjct: 2 RSVGGAMFLVMMVVLSLDLIFAFIAELDDI--RNNYQILDALWYVFLTLPRRIYDYLPLG 59 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 + +V ++ +SEL + RA G+S+ +++ + ++++ + VL+ +A E++ Sbjct: 60 AFMGCLVGLGSMASSSELTVVRAAGVSLKRIVWSAMKPALVIVVLGVLIGEYLAPPAERV 119 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 G S W + + + + N + + D ++ Sbjct: 120 AQSYKAVALGAGSNVASASGVWHKEGDSYIHL-----NAVQPNGVLHGVSRFQFDDDRQL 174 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKFSEQFASR 247 + A+ AI D L+ V + + + + + + Sbjct: 175 LAASFAERAIYQGDHWLLENVRTTSFEDDRTVRVDDRTLRWETGLSPGVLSVLIVKPENL 234 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + ++ + + + R F+ ++PL M L+A S RS Sbjct: 235 SMTGLYTYATYLGEQS-LNASRYWLAFWKKALMPLGTAVMVLVAISFIFGPLRSVTMGFR 293 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V G+ G + + + P+ A L+P+ ++ +++ + Sbjct: 294 VFTGLLVGLLFKYMQDFLGPMSLVYGFNPMLAVLVPIAVSAVAGGILMRR 343 >gi|160888237|ref|ZP_02069240.1| hypothetical protein BACUNI_00646 [Bacteroides uniformis ATCC 8492] gi|317480118|ref|ZP_07939228.1| hypothetical protein HMPREF1007_02345 [Bacteroides sp. 4_1_36] gi|156862183|gb|EDO55614.1| hypothetical protein BACUNI_00646 [Bacteroides uniformis ATCC 8492] gi|316903665|gb|EFV25509.1| hypothetical protein HMPREF1007_02345 [Bacteroides sp. 4_1_36] Length = 378 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 122/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 21 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPYF 80 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ + T + + Sbjct: 81 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGSY 140 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I+ ++ + I S I D + Sbjct: 141 VIPKGSVTRINFEDKYYKPRKANTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFND 200 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D ++ K+K + + + I K + + ++ F Sbjct: 201 KQLVSHLTARSITYDTTAVHKWKIKDYMIRQMDGMKESITKGDRIDTTLFMEPADFLIMK 260 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + ++ + + E +++ I + +TLI S+S + ++ Sbjct: 261 NQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTK- 319 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F TI +F +G + PV A IP I+ ++ + Sbjct: 320 GGMGLHLGIGLALSFSYILFQTIASTFAVNGNMPPVIAVWIPNIMYAFIAFYL 372 >gi|302345342|ref|YP_003813695.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] gi|302149873|gb|ADK96135.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] Length = 405 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 119/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GIL Y K ++ T +Y +L + + V D NE ++ + + A VP Sbjct: 46 GILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFVPYY 105 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+SI +L+ P+++ IL+ T + + Sbjct: 106 SNLFSPLFVFIAVIFFTSKLAGNSEIISMMAAGMSIRRLMRPYMISCILIAGLTFYLNSF 165 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + ++++ ++ + N I + T Sbjct: 166 VIPHGTVIRQNFESLYRNSKKNTSAENVQLFVAKNTTAYIQHYDDQYKRGYGFSLVKTKN 225 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQK 239 + D K+ + S + ++ Sbjct: 226 KKIVSHMTAMEIQYDTVADTKYHWKVSNWKIRTLKGLKEHIQSGASKDTVLLMEPTDLVY 285 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E++ +S + + E +F+ I + +T+I S+S Sbjct: 286 SKGQQETFTSPELLNYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSLSSR-K 344 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F P+ AA IP I+ ++ Sbjct: 345 RKGGMGLYLGIGLALSFGYIMLQTVSATFAIKDDTPPILAAWIPNIIFAIIAYF 398 >gi|212636934|ref|YP_002313459.1| permease YjgP/YjgQ [Shewanella piezotolerans WP3] gi|212558418|gb|ACJ30872.1| Permease YjgP/YjgQ [Shewanella piezotolerans WP3] Length = 352 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 126/359 (35%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K + ++ LL L +I + +G YS+ + +P Sbjct: 1 MRILDLYIAKVLISSSSLSLLILTGLSGIIKWVDQLRLVG-RGTYSMMDAGIYVLFLIPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ + L SELV+ ++ G+S Q+ + +I L I +L+ Sbjct: 60 DIEMFFPMAVLLGALTGMGMLASNSELVVMQSSGLSRLQIALSAMKTAIPLMILVMLLSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E ++ + G +S W + + +I + +++ D T Sbjct: 120 YVAPVAEVRAKEIQRTQISGGSLIESTRGVWAKDGDLFVNIGG-----VVDSNNLRDITL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 D + A+ A +L V + + + + Sbjct: 175 YEFDDTTNLTSTVHAETAKYMGKFWQLYDVRRTSLKSEQVVLTNLDEDKWISSLTPEKLS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S ++ + + +N + R E + ++ P+ + M L+A S Sbjct: 235 VVSVKPESLSIEGLLDYLDYLK-NNKQASARYELALWRKLMQPVTIAVMMLVALSFVFGP 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ V G+ +GF Y + L +A +P ++ + ++ + + Sbjct: 294 LRTVTMGARVLLGVVAGFSFYICSEVFGPLSIVYGLPAFISAGMPALIFSAGALYYIRK 352 >gi|258591111|emb|CBE67406.1| putative Permease YjgP/YjgQ family protein [NC10 bacterium 'Dutch sediment'] Length = 426 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 42/369 (11%), Positives = 123/369 (33%), Gaps = 16/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ + + L ++ + + + + + + L + +P Sbjct: 32 LIDRHLLREMAASFALGLGTFTFVLLMDQMMRLMDLIINK-GAPVGVVLRLISYILPFSF 90 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L+ + + ++ E ++ + G+S+++L+ P V+ ++ T+ + + Sbjct: 91 TVTIPMSVLLAVLATYGRVSSEGEAIVLKTSGLSLYRLMAPGVLFGVVATFATLWISTLV 150 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 S K L Q + + ++K H Sbjct: 151 QPSSTKAFKTLTHQLYHTHVLTALENGIFNTEYPGLAIYVDRSEKTDGTLHGILVIDQRN 210 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKL------------KKVVEYQYGRIPIDKNSTTLNIP 231 + II ++ L + + + +Y + + + Sbjct: 211 QADQRLIIAQEGKLLNKDDETEAPIGLQLSRGTLQISSRDHPDRYRNLDFETYDLQILTG 270 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 + Q + E+ +++ NK + + + +P+ + +++I Sbjct: 271 GTVAETVARVRQSKEMNIGELRTEIARLNKDGGKAWP-LQVELHKKFSLPIACLILSMIG 329 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 A +++ ++ + + +A + Y ++ +S G G + P P + ++ Sbjct: 330 APLAMRIKKAGR-GVSLALSVAFAVFYYILLATGESLGSRGRIDPALGVWFPNLTLGMIA 388 Query: 352 ILILLQKED 360 I ++L ED Sbjct: 389 IGLVL-TED 396 >gi|297569344|ref|YP_003690688.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925259|gb|ADH86069.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] Length = 361 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 132/363 (36%), Gaps = 7/363 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY F + + L G + + +ID E + + I ++P Sbjct: 1 MIMLLDRYLFWQFTRNLALVLGGLVAIYLLIDFFERVDSFLD-AGLGIGTAITYLLLKIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI +Q+IP L+ I+ LNR +EL+ ++ G+S+ +++ P ++ ++ + Sbjct: 60 LIFEQLIPVCLLLAGIITLGVLNRHNELMALKSGGLSVRRIIRPLLLAALFFSGLALAAG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + L + + + +I + DF+ Sbjct: 120 QWLLPPTLAETNRLWYEEVRQQTPEGIERN--GRIYYRGAKGIYSFAQPDDPASGLPDFS 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKK----VVEYQYGRIPIDKNSTTLNIPIKMDG 236 +++ ++ A +A + L V+ N T+ +P + + Sbjct: 178 FTAWNEEYQLARLLTAAIAHWEAGRWTLLDGQLKVLTADDQYRTTIFNEMTIELPERPED 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F A R E++ + S + R E Q + + + + I +++ Sbjct: 238 FFLPPYALAERPLSELLARALAPEDSPRRYEARLELQQKISYIFLGLPLLLVGIPLLLAM 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + V F ++ + +I ++ +G L P AA + +L SL +L Sbjct: 298 HRGRGRDLALAVPASCIMAFAVWGLWSICQALASAGHLSPALAAWLVHLLAGSLGFYFIL 357 Query: 357 QKE 359 +++ Sbjct: 358 RQD 360 >gi|261416540|ref|YP_003250223.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372996|gb|ACX75741.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327353|gb|ADL26554.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 366 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 118/364 (32%), Gaps = 15/364 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY +LK L + GA+++ VID + + +P I+ Sbjct: 3 FSRYLIWNFLKMFLIVVCGAVLIFVVIDFVGNIKTWLSR---DMKAVTDYYLSYLPYILY 59 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I P + + N+ R E+ ++ G S ++ L P +L+ I + + Sbjct: 60 LITPVALFIAVLASVGNMARHLEMSAMQSSGQSPFKTLLPIFFLGVLMSIGSYEMSEHWL 119 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAK-----KILPENHIWEDF 179 ++++ + + +++ + K+ + + Sbjct: 120 PDANHKRFEIMETNAQKRKNPRIKEKQDFTFIDSEKNSWFFKHYSGKNKLGRDVVLLVRE 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI------PIDKNSTTLNIPIK 233 +++ + R ++ + + + + + P+ + S + Sbjct: 180 RGRLVERYDVRSIRWIEKDSVTKDGFWRFENGFHRVFKKDGSVDVFPVRQKSMKGKVNTH 239 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + + ++ +S ET F M + + LI A+ Sbjct: 240 PNDLINERQLPDEMDSKMVKARIDVLRRSGE-DTRAMETALQFKYSAHWMNLIVLLIGAA 298 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + +SRS G+ F Y + I G++G L P AA + L+ + Sbjct: 299 LCHRYSRSGGLSQKFGVGLLLVFSYYILERIGLKMGENGALSPFWAAWNSHFIYAGLAFV 358 Query: 354 ILLQ 357 +L + Sbjct: 359 MLYR 362 >gi|16125407|ref|NP_419971.1| hypothetical protein CC_1155 [Caulobacter crescentus CB15] gi|221234150|ref|YP_002516586.1| hypothetical protein CCNA_01213 [Caulobacter crescentus NA1000] gi|13422473|gb|AAK23139.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963322|gb|ACL94678.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 353 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 131/358 (36%), Gaps = 11/358 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y + L L M ++ ++DL ++ + + + ++ AA R+P + + Sbjct: 3 LQLYVLRTVATRILGAALILMSVLQILDLLDVTSDILDR-GLGMAGVGYYAALRLPRLFE 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q+ P L + F L R S +V RA GIS ++++ V ++ + + L +A Sbjct: 62 QVAPIAVLAGGLFAFSQLARESAIVAMRASGISGYRIVGMAVPAAVAVMLLDALCGQVLA 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + W N P + D+ IGA I T Sbjct: 122 P----RADPTLADWWRNTTPVAERKEPVPRTFRAGADLVIGANASADGRTI-TGVTIFRR 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQKFS 241 D K ++ + +A A L++ ++ ++ T+ ++ Q Sbjct: 177 DSKGILVEKVEAPAARYDGKAWTLEQPKTTRFAGDLSQASTAAATSWPTALRPQDVQGLF 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + + T P + + M L++A V+L RS Sbjct: 237 GDDSMPTAASARRALENGG--SDRPESFYATHLQAAFASPFVSLVMLLLSAPVALANFRS 294 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 Q +++ G+ +G M ++ + G+SG L P A + +L++ L E Sbjct: 295 GQGAVLLTGGLAAGLMFLVANGMLTALGESGALTPFLAVWAAPAIFGALAVRTFLALE 352 >gi|71908693|ref|YP_286280.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] gi|71848314|gb|AAZ47810.1| permease YjgP/YjgQ [Dechloromonas aromatica RCB] Length = 362 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 119/356 (33%), Gaps = 8/356 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + + L + L + + +G+ YS+ A+ A +P ++ ++ Sbjct: 10 RYLIRETFASVFLVLAAFLALFAFFNFIDELRTVGK-AGYSVVHAALFVALSMPGLVYEL 68 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 IP TL+ + L R SE+ + RA G++ LL ++LL + T ++ + Sbjct: 69 IPIATLIGTLYALSTLARHSEITVLRASGLATSDLLMTLFRAALLLALLTFVIGEAVVPF 128 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E++G ++ + + + FI +K P+ + + Sbjct: 129 SERLGKEIRAKALS---TVIAQSGFDSGLWVKDGRSFINIRKAAPDEPLEGVRIYHFSQQ 185 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQKFSEQ 243 D +L+ VV ST + Sbjct: 186 NLLESVTDAQAADFEDPDLWRLRGVVRTVLEGDTSRVESTQTGEWRSTVTPTLLAALMVS 245 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + ++ N R E + +V PL + M +A +R Sbjct: 246 PERMSLFGLLNYTKHL-TENKQKTERYEIALWKKVVYPLAALVMVALALPFGYSHNRVGG 304 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + G+ G + Y + + + G P+ +A P L + ++ +L E Sbjct: 305 VSLKIFAGVMLGILFYALNGLSSNLGAINSWSPIISATAPSGLFLLVATGMLWWVE 360 >gi|333030546|ref|ZP_08458607.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] gi|332741143|gb|EGJ71625.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] Length = 363 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 120/360 (33%), Gaps = 9/360 (2%) Query: 1 MPGIL---WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAAT 57 M +L RY K +L T ++ + + + V D E ++ + Sbjct: 1 MKKLLTRIDRYIIKKFLGTYIFAITLVISIAVVFDFTERMDRFMNNNAPWDAIIFDYYFN 60 Query: 58 RVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTV 117 VP + I L SE++ + G+S +L+ P+++ + ++ +FT Sbjct: 61 FVPYFANLFSALFVFIAVIFFTSKLAENSEIIAMLSTGMSFSRLMKPYMISAAIIALFTF 120 Query: 118 LVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 ++ + G ++ Q+ K + I I + + Sbjct: 121 VLGGYVIPKGSVARVEFEDQYYKKRKKSSARNIQLQVEEGLIAYIDRYSDYNKTGYRVIL 180 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKM 234 D + + + LK + + +S + + Sbjct: 181 DKFEGKKLSSHL--TARSITYDSTAVNMWTLKDYTVRDFDGLHEYISKGDSKDTVLAMDP 238 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 F +F Q + E+ + + E +++ I + +T+I AS+ Sbjct: 239 SDFLEFQNQEQMMTNPELRAHIDKQKSRGFGNTKVFEIEYHKRIAMSFAAFILTIIGASL 298 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S ++ + + G+ F TI +F SG++ P+ + IP IL ++ + Sbjct: 299 SSRKAKRG-MGLHLGVGLALSFSYILFQTISGTFAVSGVVSPMVSMWIPNILYAFIAYYL 357 >gi|325279695|ref|YP_004252237.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] gi|324311504|gb|ADY32057.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] Length = 359 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 108/354 (30%), Gaps = 2/354 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y + +L T + L+ + +V V DL+E + E + +P Sbjct: 1 MKKLDLYIIRKFLGTFFFSLVLILCIVVVFDLSEKLEKFLENEAPVKAIVFDYYKNFIPY 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 T + I + SE++ + GIS + L P+++ + ++ I + L+ Sbjct: 61 FANVFSSLFTFISVIFFTSKMAYDSEIIAILSTGISFRRFLFPYLMSATVIAILSFLLGA 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + I+ +Q+ K I + + + Sbjct: 121 FIIPNANEKRIEFEKQYMGKRYANKEQNIHRQIAPGTYIYMSSYSVASNVGYDFSIENFR 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 R D K + + F + Sbjct: 181 GDTLVNKLTSSRITWDKENKKWVIHNWKLREIEGDKETYTTGQKLDTVMAFQPSEFSENP 240 Query: 242 EQFAS-RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ +F E+ + + + + + Y +I +T I S+S R Sbjct: 241 KKIREQLTFPELDRYIDRMKMRGSSNVIEFQIEKYKMIANAFATFILTFIGVSISSRKIR 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F + F +G + P+ A +P IL + + + Sbjct: 301 -GGMGLHLGIGLLISFSYILFMQFSTVFATNGNMNPLLAVWLPNILFAIIGVFV 353 >gi|121997476|ref|YP_001002263.1| permease [Halorhodospira halophila SL1] gi|121588881|gb|ABM61461.1| permease YjgP/YjgQ family protein [Halorhodospira halophila SL1] Length = 350 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 125/359 (34%), Gaps = 14/359 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + + +L L + L FV + + + + A P Sbjct: 1 MRILTGYLARTVIAASLVALAAILALDFVFSMVDGVAD----DGLDTTTMLLKALLGAPA 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + PF TL+ ++ L EL RA G+S+ Q+ +VG ++L + V Sbjct: 57 LAYEAFPFATLIGALMGLGGLAARQELTAMRAAGVSVVQIAGAVLVGGVILALLATAVGE 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E+ + + + + D W + E+ Sbjct: 117 LVVPPAERQAAAVRGLSEADELRTGPDGALWARDGRDFLRAERPRSASHLESVTLY---- 172 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQ 238 + ++ R DAD A + + +L+ VV+ Y +++ + D Sbjct: 173 --RFVEGQLTERIDADGAHYEDGQWRLEGVVKTVYADHRLERRELEAWAWQGALSPDVLA 230 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ E+ + + + +N + + + PL +AM L+ + Sbjct: 231 VVVADPSTLPVPELWTYIQYLD-ANELDSGPYRLALWEKVATPLATLAMLLVTIPLVFTA 289 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + G+ G + + + G + P +AL+PV+ +L + L+ Sbjct: 290 VRSSGAGQRIVIGVLVGVAFFLLNRALGQAGVVYGVPPSLSALLPVVAFAALGLWGTLR 348 >gi|270296760|ref|ZP_06202959.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272747|gb|EFA18610.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 378 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 122/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 21 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWNAIVFDYYLNFIPYF 80 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ + T + + Sbjct: 81 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVVTFCLGSY 140 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I+ ++ + I S I D + Sbjct: 141 VIPKGSVTRINFEDKYYKPRKANTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFND 200 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D ++ K+K + + + I K + + ++ F Sbjct: 201 KQLVSHLTARSITYDTTAVHKWKIKDYMIRQMDGMKESITKGDRIDTTLFMEPADFLIMK 260 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + +S + + E +++ I + +TLI S+S + ++ Sbjct: 261 NQQEMLTSPQLSEYISRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTK- 319 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F TI +F +G + PV A IP I+ ++ + Sbjct: 320 GGMGLHLGIGLALSFSYILFQTIASTFAVNGNMPPVIAVWIPNIMYAFIAFYL 372 >gi|322514885|ref|ZP_08067902.1| YjgP/YjgQ family membrane protein [Actinobacillus ureae ATCC 25976] gi|322119139|gb|EFX91289.1| YjgP/YjgQ family membrane protein [Actinobacillus ureae ATCC 25976] Length = 360 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 137/363 (37%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + LL + LVF+I L E +G+ +Y + +P Sbjct: 6 MNILERYIGKTIITMIFAVLLMSSGLVFIIKLAEEFKDVGK-GSYDALTATYYSLLMLPS 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I++ IP + L+ ++ NL SELV+ ++ G S +++ + +I L +FT+LV Sbjct: 65 DIKEFIPVVALIGGLLGLGNLASRSELVVMQSSGFSRFRIGLAVMKTAIPLIVFTMLVSE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 E+ ++ + + W + N I EN + S Sbjct: 125 WGIPQTEQYARNMRSIAQSGSSMLSTKGGFWAKDGNDFIYIRH------IENERKLNNLS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 I + + A AI L+ V I + + I Sbjct: 179 IYHFEDKSLKSVTQAQNAIFNGKNWTLQNVQTSSIADNSIQQAKEVNKDWQTTITPSKLG 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S S + + F ++ ++ R + F+ + P+ + M L+A S Sbjct: 239 IVSLKPESLSISGLSDYVGFLKETGQ-NSKRFQIAFWRKVYQPISMAVMMLLAISFVFGP 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQ 357 RS+ + GI +GF+ Y + + + ALIP ++ +S+ +L + Sbjct: 298 LRSSAMGTKLFIGIIAGFVFYVSNIVFGNMTLVFSWIPVAIGALIPSLICLSIVWWLLTK 357 Query: 358 KED 360 K D Sbjct: 358 KRD 360 >gi|192358887|ref|YP_001981939.1| putative permease, YjgP/YjgQ family [Cellvibrio japonicus Ueda107] gi|190685052|gb|ACE82730.1| putative permease, YjgP/YjgQ family [Cellvibrio japonicus Ueda107] Length = 352 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 134/360 (37%), Gaps = 13/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I Y + LL + L F+ + ++ Y+ + + VP Sbjct: 1 MRKI-TGYISRTVFSAIALTLLVFISLDFIFSFIDQLGKI--RGGYTSREAFIYMSLTVP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++IP+ L+ ++V L +SEL + RA G+S+ ++ + + + + V++ Sbjct: 58 RRLYELIPYSCLIGSLVGLGLLANSSELTVIRAAGVSVKRIAWMALRPAFVFIVAAVILG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E++ + +DN + ++ + N + + ++ + +LP I+ Sbjct: 118 EYVAPYTEQMADNRRLLVRDNWVRTTTN------MWNREGNEYMHVQAVLPSGVIYGLTR 171 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGF 237 +++ + + + V + G + + S P+K + Sbjct: 172 YQFDEQRRLVAASYTKQAIYQEEGYWQEEDVAVTRIGEQGVSNDLLPSRRWETPLKPNLL 231 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + ++ + N+ F+ + PL +++ LIA S Sbjct: 232 NILVMDPEDMSISNLNYYSNYLKEQNLRPGN-YALAFWQKTLQPLATMSLVLIAISFIFG 290 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + GI G + +M PV A LIP+++ I + + +L + Sbjct: 291 PLRSVTMGQRIFTGIVFGVGFQLLQKLMGPASMVFGFAPVFAVLIPIVICILVGVFLLSR 350 >gi|229496640|ref|ZP_04390354.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229316537|gb|EEN82456.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 358 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 117/357 (32%), Gaps = 8/357 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + +L T +L + + V D+NE ++ VP Sbjct: 1 MFLRLDRYIIRLFLGTYFSSILLILSVAIVFDINERISKFLNPECSLYEIVFHYYLNFVP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 P + I L +E++ A G+S +LL P++ + ++ + T L+ Sbjct: 61 YYANMFSPLFVFLSVIFFTSKLAEKTEIIAILASGVSFKRLLRPYLFSAAIVALLTFLLS 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + G ++ D ++ + + ++ +F +N +F Sbjct: 121 SFVIPPGSRVRNDFQNKYFRDKRQTYAES----VQIQVSPSLFAYIHSYSADNKTGYNFM 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGF 237 + + +L +YG I +K F Sbjct: 177 LDKFEHNTIKSRLTAQTAEYDTLNTWRLYDYSITRYGAKRDTLERGTQLDTTINLKPQDF 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + + + + E + +T+I S+S Sbjct: 237 LISAVDAETYTTPVLHQYIGELKSRGATNVDLLEVELQKRYAAIPAAFILTIIGVSLSSR 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + +A GI F +T+ SF SG L P+ AA +P + ++I + Sbjct: 297 -KRKGGTGLSLAIGIALSFTYILFLTLASSFSASGALSPIVAAQMPNAIYAIIAIFL 352 >gi|172036161|ref|YP_001802662.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] gi|171697615|gb|ACB50596.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] Length = 401 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 46/367 (12%), Positives = 117/367 (31%), Gaps = 16/367 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L+ + +L I N + + + + +VP Sbjct: 32 DRYLASQLIGPLLFSVGLVSVLGVAIGYLSDLADKVVDSNLPLIQASEILLLKVPEFTAY 91 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P ++ ++ + L+ SEL+ R G+S+++L+ P VV S+++ T LV + Sbjct: 92 ALPISVMLSTLLTYGRLSNDSELIAFRGCGVSLYRLIVPAVVMSLVVTGVTFLVSELVVP 151 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP---------QQDIFIGAKKILPENHIW 176 + ++ ++ + + ++ + + ++ Sbjct: 152 AANYRATAILVEYLQEEHPYWQNKDIFYPDYEQVVLPNGEKEKRLKHLFFAEQFDGQNLK 211 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM-- 234 ++++ I D+ + YQ K + Sbjct: 212 TLTVLEWLEERLNRIVVSDSATWNGQEETWDFFDGTIYQLAPDASYKEAYPFEHRQLPLT 271 Query: 235 ---DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLI 290 F + + + M R + + + P + V ++ Sbjct: 272 KAAFEFALQGRDPYEMNIIQARQYMKILKMMGDDKKLRMFQVRIQQKLAFPFICVVFGVV 331 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 +++ + + F Y + ++ S G G++ PV A +P IL +++ Sbjct: 332 GSALG-SMPQQMSRATGFGLSVVIIFSYYLLGFLIGSLGLMGLISPVLAGWLPNILGLAM 390 Query: 351 SILILLQ 357 +L + Sbjct: 391 GGWLLYR 397 >gi|323144744|ref|ZP_08079321.1| lipopolysaccharide export system permease protein LptG [Succinatimonas hippei YIT 12066] gi|322415495|gb|EFY06252.1| lipopolysaccharide export system permease protein LptG [Succinatimonas hippei YIT 12066] Length = 355 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 134/360 (37%), Gaps = 11/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 GIL RY K T L +L +I + +G + A VP Sbjct: 3 FGILDRYIGKNVFFTILLVTFCLTLLTTLITFVDQMRYIG-RGSVDFLFLVSHVALEVPG 61 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ P L+ ++ NL RTSEL++ ++IGIS ++ + I L + V + Sbjct: 62 IVVLFFPVAVLLGGVIALGNLARTSELIVMQSIGISRTGIVLSALKTVIPLILVIVCLGE 121 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E+ + + NG+ ++ W++ + I + Sbjct: 122 FVVPRVEQYAENRLNFASSNGNLSVTNDGLWLREGHSFIGIRYTMSDGSLLD------IV 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + + A + + K ++ V + + + + S ++ + + + Sbjct: 176 RYEVEGKNLKAFSRAKSGVYSDGKWVMRDVRKTVFAENKVIRTSLAEEKWSLNLTPERVE 235 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + +I +++ ++N + Y + PL ++ M L+AAS Sbjct: 236 VVGVKGYNLTARGLIDYINYLEENNQ-DASSYRLELYNKFMSPLTMIVMLLLAASTVFGP 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS V GI GF Y I F + P+ A +P ++ + L+I +L +K Sbjct: 295 LRSMTMGARVLAGIALGFGFYLANQIGAPFALVYGIPPILGASLPTLVFMLLAIALLRRK 354 >gi|86147549|ref|ZP_01065859.1| hypothetical protein MED222_22708 [Vibrio sp. MED222] gi|85834588|gb|EAQ52736.1| hypothetical protein MED222_22708 [Vibrio sp. MED222] Length = 323 Score = 124 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 112/330 (33%), Gaps = 11/330 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++G Y + + +P Sbjct: 1 MFKILDLYIGRTIIATTSLVLVTFVGLSGIIKYVEQLRKVG-RGTYDLLQALYFVLLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ L +SELV+ +A G S + + +I L + L+ Sbjct: 60 RDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGFSKLDIGLSVLKTAIPLMVIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ DL G + W + +N I + ++ ++ Sbjct: 120 QWGAPQAQKMARDLRTISVAGGSIISTQSGVWARDANDFIFIVK-----IDDDKLYGLNM 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMDG 236 + K ++ + ++ ++ V + + + + D Sbjct: 175 WRYDENKALKTAIYSKEVDYVGDNVWTMRDVEVTSFENEIQVTKESLPTFSWETSLAPDK 234 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + +S+ ++ R E + I P+ + M L+A S Sbjct: 235 LAIVTVKPEELSLSGLYDYVSYLK-ASEQDAARYELALWRKITQPISIAVMMLMALSFIF 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 RS + G+ +GF Y Sbjct: 294 GPLRSVTMGARILSGVIAGFTFYISSEFFG 323 >gi|323345623|ref|ZP_08085846.1| hypothetical protein HMPREF0663_12382 [Prevotella oralis ATCC 33269] gi|323093737|gb|EFZ36315.1| hypothetical protein HMPREF0663_12382 [Prevotella oralis ATCC 33269] Length = 412 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 116/354 (32%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L RY K ++ T ++ +L + + V D NE ++ + + A +P Sbjct: 53 KRLDRYIIKKFIGTYIFSILLIIAIAIVFDFNENLSKFTQYHAPLHAIIFDYYANFIPYY 112 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ +L+ + + Sbjct: 113 SNLFSPLFVFIAVIFFTSKLAGNSEIISMLAAGVSFRRLMRPYMISCVLISALSFYLSAY 172 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +++N +D + + I + D Sbjct: 173 VIPHGTVIRQNFESLYRNNRKLTSADNVQLQVGTGIIAYIQHYDDRSKRGYGFSLDKFQE 232 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D ++ Q + S I ++ Sbjct: 233 KKLISHMTATEISYDTISESKYHWTVRNWKIRQLKGLREHITSGGEKDTLIQMEPTDLVY 292 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + ++ +S + + + +++ I +T+I S+S Sbjct: 293 SKGQQETFTSPQLKDYISKQIDRGSGNVVQYQVEYHKRIAASFASFILTIIGVSLSSR-K 351 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + P+ AA +P IL ++ Sbjct: 352 RKGGMGLYLGIGMGLSFGYILLQTVSSTFAINAGAPPMLAAWMPNILFAFIAYF 405 >gi|325297714|ref|YP_004257631.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] gi|324317267|gb|ADY35158.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] Length = 371 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 119/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L RY +L T + + + + V D+NE ++ + +P Sbjct: 14 KRLDRYIIVKFLGTYFFAIALIISISVVFDINENIDRFINNKAPLEAIVFDYYLNFIPYY 73 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +L+ P+++ + ++ T ++ Sbjct: 74 TNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAAIISAVTFMLGTE 133 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G + +++K + I S + D Sbjct: 134 VIPKGSVTRLKFEEKYKKKKSADYARNIQLEVDSGVVAYMERYENYNKTGYRFSLDKFED 193 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D A + ++ + E + + I + I ++ F Sbjct: 194 HKLVSHLTARRITYDTASYHKWIIRDYMIREMRGMKEVITRGERIDSIIKMEPQDFLITR 253 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + ++ + + + + E +++ I + +T I S+S + Sbjct: 254 GQQETMTSPQLREYIQKQKQRGFANIKEFEVEYHRRIAMSFAAFILTAIGLSLSSRKVK- 312 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F TI +F +G + P A IP IL + ++I + Sbjct: 313 GGMGLHLGIGLALSFSYILFQTISATFAINGNMPPALAIWIPNILYLFIAIYL 365 >gi|332969353|gb|EGK08378.1| YjgP/YjgQ family permease [Kingella kingae ATCC 23330] Length = 354 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 133/361 (36%), Gaps = 12/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + Y L + L IDL +G+ NY+++ A ++P Sbjct: 1 MKLLSRYIITRLSLMSAYALFAILSLYSFIDLLSEIGIVGQ--NYTMAVALQYIALQMPA 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q++P TL+ ++ L +SE + + G S +L+ + + +FT+L+ Sbjct: 59 RAYQLMPLATLIGGLIALNQLVSSSEWAVIKTSGWSSKRLIGTILQFGAIFAVFTILLGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + G + + W++ N +I + + D Sbjct: 119 WIAPELSRRGDAIKTLARSQQTTLVH-NGVWIKQPNSMINI-----GAMLPDKTLLDVKI 172 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + + ++ A A N + +L +V + I + T I+ + Sbjct: 173 WQFNDQYQLTESVYAKQARFANGQWQLNQVQSSELADKQIRTSQQGQRTWQFNIQSNMLD 232 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + SF + + + + N + ++ +V P+ + M L+A + + Sbjct: 233 VLMVKPEQMSFINLTQYIGYLKD-NKQQTEAYDVAWWNKLVYPIATMVMALVALAFTSNS 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + GI G + + + + + +A++P + ++ +++++ Sbjct: 292 GRHGNLGLKLFGGICLGLLFFFTGRLFGFTTQLYRVPAFVSAVLPTLGFALWAMWLIVKQ 351 Query: 359 E 359 E Sbjct: 352 E 352 >gi|254521231|ref|ZP_05133286.1| putative YjgP/YjgQ family permease [Stenotrophomonas sp. SKA14] gi|219718822|gb|EED37347.1| putative YjgP/YjgQ family permease [Stenotrophomonas sp. SKA14] Length = 363 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 116/364 (31%), Gaps = 10/364 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 Y + T L + L V+ + +G+ Y++ A VP Sbjct: 3 FDLYLGRTVFTTVLLTWAVLVGLDVVMAFSGEFKDIGK-NGYTLGHAAAWVLYTVPRRAY 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + P ++ ++ L TSEL RA+G+S +L + LL V + Sbjct: 62 TMFPTAAVIGALMGLGQLAATSELTALRALGLSRRRLSVSVAIALSLLTAVMVFSAETLG 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENH---IWEDFT 180 G+ L K D + W + + G ++++ + I D Sbjct: 122 PWGQDRADALKASAKWGRDIATTRYSGLWAREGDTFLSAAGGEEQLVGDKGTRLILRDVR 181 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 I + +I A A D L V +G + N + Sbjct: 182 LYRIAEDGQIASITHAATAEHDRDGWVLTGVRRDTFGERSATRQEVAREPWNSRLDAGAL 241 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + E+ + + ++ E ++ PL ++A+ L A + Sbjct: 242 AAGIAKPRNLRITELRASIEYRERNG-LDARDFEDIYWSRWFYPLNVLALCLAAVPFAFG 300 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + GI + + + A +P I+ +++S +L + Sbjct: 301 SLRSGGMGKRLFLGILFALGFWLLQLFFGRMAGALKFDYRIAYALPPIVMLAVS-GLLFR 359 Query: 358 KEDG 361 ++ G Sbjct: 360 RKSG 363 >gi|74316600|ref|YP_314340.1| hypothetical protein Tbd_0582 [Thiobacillus denitrificans ATCC 25259] gi|74056095|gb|AAZ96535.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 356 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 128/361 (35%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY L + + LL ++L D+ + + Y + ++ VP Sbjct: 1 MNLLARYLAGQVLAASGFMLLALLVLFAFFDVVQELGNL--RAGYGFGQATIVVLLNVPG 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +I+P L+ + L SE + R G+S W++ F V + L + +L+ Sbjct: 59 HLYEILPVAALIGTLFALARLVGNSEYAVMRVSGLSNWRVAAYFGVIGVWLALLVLLLGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ + Q+ W++ FI ++++P+N + Sbjct: 119 YVAPWSDQAAQRYKLSATRSVVAQQFRSGLWVK----DGSTFINVREVMPDNTLRGIEIY 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI---PIDKNSTTLNIPIKMDGFQ 238 + R + +L+ VVE ++ + + + Sbjct: 175 GFDQEGRLDWIRAAEIATWRGDKTWQLQTVVETRFSADGIRAQRSANLAWRSVLTPEILS 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + ++ + R E + + P ++ M LIA +++ Sbjct: 235 VLLVAPEKMSARALWRYIAHLKANGQK-ASRYELALWSKFISPFVIPIMMLIAMPFAIQS 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + V +GI +G + + + G + +P+++ + +++ + Sbjct: 294 PRARGTSVKVFFGILAGLGFHLLSRLFGHLGLLNDWPAFVVSALPLLIFLGIALAGIRWV 353 Query: 359 E 359 + Sbjct: 354 D 354 >gi|190572728|ref|YP_001970573.1| putative transmembrane permease [Stenotrophomonas maltophilia K279a] gi|190010650|emb|CAQ44259.1| putative transmembrane permease protein [Stenotrophomonas maltophilia K279a] Length = 368 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 120/367 (32%), Gaps = 10/367 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P Y + T L + L V+ + +G+ Y++ A VP Sbjct: 5 PMRFDLYLGQSVFTTVLLTWAVLVGLDVVMAFSGEFKDIGK-NGYTLGHAAAWVLYTVPR 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P ++ ++ L TSEL RA+G+S +L + LL VL Sbjct: 64 RAYTMFPTAAVIGALMGLGQLAATSELTALRALGLSRKRLSVSVAIALSLLTAVMVLSAE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENH---IWE 177 + G+ L K D + W + + G ++++ + I Sbjct: 124 TLGPWGQDRADALKSSAKWGRDISTTRYSGLWAREGDTFLSAAGGEEQLVGDKGTRLILR 183 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKM 234 D I + +I AD A D L V +G + N + Sbjct: 184 DVRLYRIAEDGRIASLTHADTAEHDRDGWVLTGVRRDTFGERSATREEVAREPWNSKLDA 243 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + S E+ + + ++ E ++ P+ ++A+ L A Sbjct: 244 GALATGIAKPRNLSVAELRTSIEYRERNG-LDARDYEDVYWSRWFYPVNVLALCLAAVPF 302 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + RS + GI + + + A +P I+ +++S + Sbjct: 303 AFGSLRSGGMGKRLFLGILFALGFWLLQLFFGRMAGALKFDYRIAYALPPIVMLAIS-GL 361 Query: 355 LLQKEDG 361 L +++ G Sbjct: 362 LFRRKSG 368 >gi|194364316|ref|YP_002026926.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] gi|194347120|gb|ACF50243.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] Length = 368 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 62/367 (16%), Positives = 119/367 (32%), Gaps = 10/367 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P Y + T L + L V+ + +G+ YS+ A VP Sbjct: 5 PMRFDLYLGQSVFTTVLLTWTVLVGLDVVMAFSGEFKDIGK-NGYSLGHAAAWVLYTVPR 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 P ++ ++ L TSEL RA+G+S +L + LL VL Sbjct: 64 RAYTFFPTAAVIGALMGLGQLAATSELTALRALGLSRKRLSVSVAIALSLLTAVMVLSAE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENH---IWE 177 + G+ L K D + W + + G ++++ + I Sbjct: 124 TLGPWGQDRADALKSSAKWGQDISTARYSGLWAREGDTFLSAAGGEEQLVGDKGTRLILR 183 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKM 234 D I + +I A A ND L V +G + N + Sbjct: 184 DVRLYRIAEDGQIASLTHAATAEHDNDGWVLTGVRRDTFGERSATREEVAREPWNSKLDA 243 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + S E+ + + ++ E ++ P+ ++A+ L A Sbjct: 244 GALATGIAKPRNLSVAELRTSIEYRERNG-LDARDYEDVYWSRWFYPVNVLALCLAAVPF 302 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + RS + GI + + + A +P I+ +++S + Sbjct: 303 AFGSLRSGGMGKRLFLGILFALGFWLLQLFFGRMAGALKFDYRIAYALPPIVMLAIS-GL 361 Query: 355 LLQKEDG 361 L +++ G Sbjct: 362 LFRRKSG 368 >gi|67924129|ref|ZP_00517574.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] gi|67854019|gb|EAM49333.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] Length = 400 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 116/367 (31%), Gaps = 16/367 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L+ + +L I N + + + + +VP Sbjct: 31 DRYIATQLINPLLFSVGLVSVLGVAIGYLSDLADKVVDSNLPLIQASEILLLKVPEFTAY 90 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P ++ ++ + L+ SEL+ R G+S+++L+ P VV S+L+ T LV + Sbjct: 91 ALPISVMLSTLLTYGRLSSDSELIAFRGCGVSLYRLIIPAVVMSLLVTGVTFLVSELVVP 150 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP---------QQDIFIGAKKILPENHIW 176 + ++ ++ + + +Q + + ++ Sbjct: 151 AANYRATGILVEYLQEEHPYWQNKDIFYPDYEQVVLPNGEKEKQLKHLFFAEKFDGQNLK 210 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM-- 234 ++ + I D+ + Y+ K + Sbjct: 211 NLTVLEWLENRLNRIVVSDSATWNGQEETWDFFNGTLYKLAPDASYKEADPFEHRQLPLS 270 Query: 235 ---DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLI 290 F + + + M R + + + P + V +I Sbjct: 271 KAAFEFALQGRDPYEMNIIQASQYMRILKMMGDDKKLRTFQVRIQQKLAFPFICVVFGVI 330 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 +S+ ++ + F Y + ++ S G G++ PV A +P IL + + Sbjct: 331 GSSLG-STPQNMSRATGFGLSVVIIFAYYLLGFLIGSLGLMGLISPVLAGWLPNILGLVM 389 Query: 351 SILILLQ 357 +L + Sbjct: 390 GGYLLYR 396 >gi|288940379|ref|YP_003442619.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] gi|288895751|gb|ADC61587.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] Length = 354 Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 136/359 (37%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + TL L G + L+ V L++ + +G Y ++ + +P Sbjct: 1 MRILDRYLAWAVMSGTLLTLAGLLPLMGVFILSDELDAIGTER-YGLAEAMLFTLLSLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q+ P TL+ ++ L SELV RA GIS+ +L+ ++G ++L V++ Sbjct: 60 YLYQLFPIATLIGALIGLGTLASRSELVAMRAAGISVGRLVRAALLGGLVLATIAVVLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E+ ++L + Q + W +I + + D Sbjct: 120 LVAPIAEQRAVELRRLALSGEAAQLTPYGFWAIDDGAYVNI-----REIRSGTSLRDIDI 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG---RIPIDKNSTTLNIPIKMDGFQ 238 +D + A+ A + + L+ + + + + + Sbjct: 175 YRVDAAAGTLEASHAEGARYEDGRWVLEGIALSRVDGEGVQVERVEHAEWDSMLDPGLLK 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + K + F + N E F+ ++ P++ ++M LIA + L Sbjct: 235 VVVADPRALPVWGLYKYIRFMSV-NKQDASAYEIAFWSKVLHPVLTLSMILIAIPMLLGS 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 SRS + GI G + Y + + AA+ P +L I ++L+L + Sbjct: 294 SRSTGMGRRMLAGILVGLVYYLVSRTFAYLALLFGMNAFLAAIAPPVLFIGAAMLLLRR 352 >gi|254786689|ref|YP_003074118.1| SecD export membrane protein [Teredinibacter turnerae T7901] gi|237687240|gb|ACR14504.1| SecD export membrane protein [Teredinibacter turnerae T7901] Length = 354 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 116/361 (32%), Gaps = 13/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + + LL + L + DL + +Q+ +Y+ +P Sbjct: 1 MRK-LQRYIAAQVWGSVMGVLLVIVSLDAIADLVDQLSQL--KGDYTFLEALFYVVLYIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P LV ++ L +SELV+ RA G+S+ QL+ + +L I LV Sbjct: 58 SSVCDYLPLAALVGCLIGLGLLANSSELVVMRAAGVSVRQLIWSVMRPVLLFIIVGALVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 ++ ++ + + +S+ W + + + N T Sbjct: 118 EYVSPYTDQYADSRRDLLQGHERALQSERGLWFREGS-----EYMHFNAVLPNGRLYGIT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG----RIPIDKNSTTLNIPIKMDG 236 ++ AI D + Q+ + S I Sbjct: 173 RYKFADGGRLEQASFIRSAIYQGDHWVEQGGEITQFDAEDKVDREEFISRNWYTEISPSL 232 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + ++ K NI + F+ + PL +++ +IA S Sbjct: 233 LNVLVLDPDELPMQRLYAYANYQEKQNI-DSSEYRLAFWQKALQPLATLSLVMIAISFIF 291 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R V G+ G + T + P+ A LIP+ + L++ Sbjct: 292 GPLRQTTMGFRVFIGVIVGLVFQTSQKLFGPMSIIMGFSPMFAVLIPIAFCFAFGWLLIK 351 Query: 357 Q 357 + Sbjct: 352 R 352 >gi|260912301|ref|ZP_05918852.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633602|gb|EEX51741.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 402 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 115/354 (32%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL Y + ++ T ++ +L + + V D+NE + + + A VP Sbjct: 43 KILDWYIIRKFIGTYVFSILLIISIAIVFDVNENLAKFTQFHAPLKAIVFDYYANFVPYF 102 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L TSE++ A G+S +L+ P++V +L+ + + Sbjct: 103 ANLFSPLFVFISVIFFTSKLAGTSEIISMLAAGVSFNRLMRPYMVSCLLISGLSFYLSGY 162 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +K++ ++ + I K D Sbjct: 163 VIPHGTVIKQNFESMYKNSKKNTSAENVQLQVDRGVIAYIQHYDDKAKRGYGFSLDKFEN 222 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQK 239 + D ++ + + + I ++ Sbjct: 223 KKLVSHMTASEIQYDTISDSKYHWQVSNWRIREMKALREKITYGDRKDTLIMMEPADLVF 282 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + E +++ I +T I S+S Sbjct: 283 SKGQQETFTNPELSAYISKQIGRGSSNVVQYEVEYHKRIAASFASFILTTIGLSLSSR-K 341 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + P+ AA IP +L ++ Sbjct: 342 RKGGMGLYLGIGLALSFGYILLQTVSATFAVNADTPPMLAAWIPNLLFAVVAYF 395 >gi|113868947|ref|YP_727436.1| permease [Ralstonia eutropha H16] gi|113527723|emb|CAJ94068.1| predicted permease [Ralstonia eutropha H16] Length = 388 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 118/389 (30%), Gaps = 34/389 (8%) Query: 2 PGIL---WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 IL RYF + + L + L D+ + Y+ + Sbjct: 1 MKILRVYERYFGRLVYGVFAFILFAVLSLFVFFDMLNELENV--NNQYTSLVALFHVLLQ 58 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 P + +++P L+ I VF L SE I R G++ Q L ++ L I T + Sbjct: 59 APTRVYEVLPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLAIVTFI 118 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKIL------PE 172 IA E+ + + W++ + G Sbjct: 119 FGEFIAPRAEQYAQKIKLEAIGATVSSGFRSGVWVKDRDKDAATGGGEITRFVNVAGLRP 178 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVE------------------- 213 + T D + ++ + A ++ + V Sbjct: 179 DQTITGITMYEFDPQYRLRMIRVAQEGRYQGGQLWELQGVNETRFIELASPAQGAKPARD 238 Query: 214 ---YQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + + T++ + S ++ + + N R Sbjct: 239 SLAPDFRAEQVKFPRVTMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRD-NKQDTQRY 297 Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 E F+ ++ PL L M +A + +R+ + V GI G + T+ G Sbjct: 298 EIAFWKKVIYPLTLFVMMALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHVGL 357 Query: 331 SGILLPVAAALIPVILTISLSILILLQKE 359 P+ +AL+P L + +++L L + Sbjct: 358 LHTWPPIISALVPGTLYLMVALLALRWVD 386 >gi|302879721|ref|YP_003848285.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] gi|302582510|gb|ADL56521.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] Length = 358 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 123/361 (34%), Gaps = 8/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + ++L +D MG YS+ + +P Sbjct: 1 MNLLTRYLAREIYASIALVFAALIMLFAFLDFIGQLGTMG-YGQYSLGYVVLFVLLTIPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++ P L+ IV + SEL I RA G S Q+L ++ + + + + Sbjct: 60 HIYELFPVAVLIGTIVALVQMAARSELTIYRASGASTGQMLGALSKIAVPMILLSFICGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA E++ L + + ++ + F+ + ++P+ + + Sbjct: 120 LIAPPSERLAQKLRLKALNTQVSLQAFRS---GVWVKDDASFVNVRSVMPDTSLSDIDIY 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + + + + +L V+E + + S + Sbjct: 177 TFDKSFHMNSVIRAKRASYLEPGVWQLHDVLETSFAARGVSTKSMPVREWQSALTPGILS 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S ++ K S ++ R E + +V P L+ M ++A + Sbjct: 237 VMLVVPEQMSALDLYKYASHLKENKQQSA-RYEIAMWNKLVYPFALLVMMVLALPFASYQ 295 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ I+V GI G + + ++ S G P+ +A + + + +L + Sbjct: 296 RRAGGVSILVFMGIVLGLVFHFAGRLVGSLGSLNDWQPLFSATAMTGVFLLIGAFMLWRV 355 Query: 359 E 359 E Sbjct: 356 E 356 >gi|300312407|ref|YP_003776499.1| permease [Herbaspirillum seropedicae SmR1] gi|300075192|gb|ADJ64591.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 60/376 (15%), Positives = 115/376 (30%), Gaps = 20/376 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RYF ++ L+ L + L ++ Q+G Y + + +P Sbjct: 1 MRVIQRYFTSEITRSVLFALAAFLALFAFFEMMGQLEQVG-RNGYKLQQAVFYVLMGLPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ I L SE I R +S Q + + T++ Sbjct: 60 NVYELMPTAVLIGTIYTLSQLAARSEFTIMRVSSMSTGQAARVLARIGVGFAVLTIVFGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI--------FIGAKKILPEN 173 IA + L Q + + W + + FI + + P+ Sbjct: 120 LIAPKATEWAEKLKLQAQGASLSSQFRSGMWAKDVIRDHGLEGNVVGSRFINIRTVQPDG 179 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----------GRIPIDK 223 I + N + L VV+ + + Sbjct: 180 RIEGVKLYELDSDFHMARMVTAKAGMYDGNHQWTLSDVVQSDFTGGSDRKITEPVKTVKS 239 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 TL + + S Y+++ +N R E F+ IV PL Sbjct: 240 AQLTLVSEVTPEILSVLFADPDRMSAYDLLAYTKHLE-ANNQRTDRYEIAFWKKIVYPLS 298 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M +A + R+ + + GI G I ++ G A +P Sbjct: 299 IFVMLALALPFAYLHFRAGGVSLKIFTGIMIGVCFQLINSLFSHLGLLNTWPAFVTAALP 358 Query: 344 VILTISLSILILLQKE 359 +L ++L+ L E Sbjct: 359 SLLFMALAAGALWWVE 374 >gi|196228189|ref|ZP_03127056.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] gi|196227592|gb|EDY22095.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] Length = 380 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 124/369 (33%), Gaps = 14/369 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + +++ L L G + + +ID+++ N E + T++P Sbjct: 1 MNILDRYVLRSFIEPFLMCLAGFIAIWLIIDVSDNFNDFIE-AHARFRTILEYYVTQLPT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +P ++ + ++RT+EL+ G S+ ++L P + +L+ F + Sbjct: 60 VILMSLPVGLMLGLLFSLSRMSRTNELISQLTAGRSVVRVLAPLIGVGVLMTGFCFWLNW 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A E I D +Q+ K + + + + D +K++ + Sbjct: 120 EHAPHAESIKKDAMQKIKRGKRATDVEPVLAHLFRDRRDDRTWYVRKLIFQPGEERMQGV 179 Query: 182 ITIDKKNKIIHRKDAD----LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL--------N 229 + K + KL+K + ++ + Sbjct: 180 HVTQQDETGHILKKWYASSVYYDPAKQEWKLEKGKIVTFKPDGDVEDQDLFLRGFRIIKD 239 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 P S +E+ + + +++ +P + Sbjct: 240 WPETPWRVASTELNPGGLSVHELHEYLKYNSDFPAVQLAPYRANLADRYALPFQCLLAVF 299 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 +AA + + ++R V + ++ + GK + P + +PVI Sbjct: 300 LAAPLGIVYNRRGVIG-GVTAAMVLLVLMIMSHSFFVMLGKGMRMDPNFSPWVPVIGLGI 358 Query: 350 LSILILLQK 358 + ++++ + Sbjct: 359 IGLVLMYYR 367 >gi|194290553|ref|YP_002006460.1| permease, yjgp/yjgq family [Cupriavidus taiwanensis LMG 19424] gi|193224388|emb|CAQ70399.1| putative permease, YjgP/YjgQ family [Cupriavidus taiwanensis LMG 19424] Length = 392 Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 57/385 (14%), Positives = 116/385 (30%), Gaps = 35/385 (9%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RYF + + L + L D+ + Y+ + P + ++ Sbjct: 9 RYFGRLVYGVFAFILFAVLSLFVFFDMLNELENV--NAQYTSLVALFHVLLQAPTRVYEV 66 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I VF L SE I R G++ Q L ++ L + T + I Sbjct: 67 LPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALVTFIFGEFIGPR 126 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ------DIFIGAKKILPENHIWEDFT 180 E+ + + W++ + F+ + P+ I Sbjct: 127 AEQYAQKVKLEAIGATVSSGFRSGVWVKDRDKDPAGDGEITRFVNVAGLRPDQTITGITM 186 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY-------------------------- 214 + + R + +L+ V E Sbjct: 187 YEFDPQYRLRVIRVAQEGRYQGGQSWELQNVSETRFVELAPHAQGAQPAAATPPRDALAP 246 Query: 215 QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 + + ++ + S ++ + + N R E F Sbjct: 247 DFRAEQVKFPRVAMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRD-NKQDTQRYEIAF 305 Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + ++ PL L M +A + +R+ + V GI G + T+ G Sbjct: 306 WKKVIYPLTLFVMVALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHVGLLHTW 365 Query: 335 LPVAAALIPVILTISLSILILLQKE 359 P+ +AL+P L + +++L L + Sbjct: 366 PPIISALVPGTLYLMVALLALRWVD 390 >gi|126031979|gb|ABN71555.1| putative permease [uncultured bacterium] Length = 365 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 119/357 (33%), Gaps = 1/357 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY K ++ + LL ++++ ++DL ++ P S ++ + R+P ++ Sbjct: 10 TLTRYIAKLFVVRVVGVLLMLVLVLQMLDLLSESGKILSQPGNSEAQLWTYVSLRLPQLV 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P+ L+ I+ LN+ SE+V +A G+S Q+L P ++ ++ + ++ + Sbjct: 70 ARFLPYSALLATIITLATLNQNSEVVAMKAAGLSAHQVLAPLLLTALGVSATSLAFNELV 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 T + + + Sbjct: 130 VTRSSAALKAWQAVDYGVVPRGSAGRTNVYTRDGNDILTAASVSGEGSAMRLVGVTFYRR 189 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + V + + + Sbjct: 190 DVNGAIREKIVSPRANFAQPGWRLEQPVAFDVASVQQKPIAPLVVARAVTPVQVSISTID 249 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ ++ + ++ + E +++ + PL M L+ A + +RS Q Sbjct: 250 ADGQNIVQLGRSIAALKANGRR-TSELEGKWWHKLSGPLSAALMPLLGAIAAFGLARSGQ 308 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 I G+ GF + + + G G P+ AA P +L + + +L++ E+ Sbjct: 309 LLIRAVLGMALGFTYFVVDNAALAMGNFGGYPPLIAAWAPFLLFLLIGETVLVKTEE 365 >gi|301059203|ref|ZP_07200141.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446693|gb|EFK10520.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 358 Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 133/360 (36%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K + K + L + L +ID + + S A ++P Sbjct: 1 MNVLTRYLLKEFFKLLIVCQLVFIALYLMIDFASGIDDFIK-AGAPKSVMIAYFAFKIPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I Q++P L I++F + R +E+V +A G++ WQ+ P V+ + L + Sbjct: 60 IAGQMLPPAVLTTVIILFSLMKRNNEVVALKASGVNTWQVAQPLVLLAAFLSVVLFFFSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I ++ + + + ++ K+ + D T Sbjct: 120 TIVPYASSRCNEIWRIEVKK--EHPGRFHGQNHVWYKGKNCIYFIKQFDSRKMMMVDPTF 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKV----VEYQYGRIPIDKNSTTLNIPIKMDGF 237 D K KI R D AI + +++ E G + + + F Sbjct: 178 YFFDDKFKIARRIDGRRAIWKENGWQVQNGIVQNREKDGGYDLQKFDHLEVKLDENPKDF 237 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + ++ + + R + I P +++ MTL+ ++L Sbjct: 238 IRENVEPEEMGYRQLKRFAQRLKLEG-YDANRYFVELNIKIAFPFIVLIMTLMGIPIAL- 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + V+ GI F+ I+ + ++ G +GIL P+ +A + + + +++ Sbjct: 296 WKKGMGTPVAVSIGIALCFVYLLILGLARTLGFAGILPPLFSAWLANSIFLFFGAYMMIH 355 >gi|73542370|ref|YP_296890.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] gi|72119783|gb|AAZ62046.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] Length = 383 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 108/360 (30%), Gaps = 26/360 (7%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RYF + ++ L + L DL + Y+ V + P I ++ Sbjct: 9 RYFARQVYGVFVFILFAVLSLFVFFDLLSELENV--NGKYTSLIAFVHVLLQAPTRIYEV 66 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I VF L SE I R G++ Q L ++ L + T + I Sbjct: 67 LPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALITFIFGEFIGPR 126 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-----------------------DIF 163 E+ + + W++ + ++ Sbjct: 127 AEQFAQKIKLEAIGATVSSGFRSGVWVKDRDKDPAGGEITRFVNVAGLRPDQTITGITVY 186 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + + + + + + + + ++ + Sbjct: 187 EFDAQYRLRVIRVVKEGRYQGAQSWLLSDVNETRFSELRQPGTASRDGLAPEFRAEQVRF 246 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 S T++ + S ++ + + N R E F+ +V PL Sbjct: 247 PSVTMHSELTPQILSVLLVTPERMSTLDLFRYIRHLRD-NKQDTQRYEIAFWKKVVYPLT 305 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 L M +A + +R+ + V GI G + T+ G P+ +AL+P Sbjct: 306 LFVMMALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHVGLLHTWPPIVSALVP 365 >gi|329118129|ref|ZP_08246841.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] gi|327465789|gb|EGF12062.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] Length = 356 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 127/361 (35%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY + +LY + + L D+ +GE Y+ + A ++P Sbjct: 1 MKTIPRYLIRQLSVMSLYAMFALLALYSFFDIVAEAGGIGEGG-YTAGKMAQYVFLQIPD 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q++P L+ +++ L SEL + + G+S LL F++ ++ T L+ Sbjct: 60 HAYQLMPLAVLIGSLLALSRLAANSELTVIKTSGMSTANLLTVFLIFGLIFATATALLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + + +L NG W++ +Q+ + +++LP+ + Sbjct: 120 LAAPAANRYAENLKTTA-KNGKISTGAEGLWIK----EQNSIVNVREMLPDQTLRGIKAF 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY---GRIPIDKNSTTLNIPIKMDGFQ 238 D I + + + +L+ V I+ Sbjct: 175 RHNDAFQLIESWQADAATVAPDGTWRLENVRRSILGGERVRTERHERENWQAGIRSGLLD 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + ++ + N +++ ++ P V M +A + + + Sbjct: 235 VLLVSPDQMSLAALTAYIAHLEE-NRQKTDLYRIEWWRKLMYPAATVVMAFVAFAFTPQS 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + P AA++P +L + ++ ++ + Sbjct: 294 ARHGNMGLKLFGGICLGLAFHFAGRLFGFTSRLYGIPPFLAAVLPTLLFAAWAVWLIRRH 353 Query: 359 E 359 E Sbjct: 354 E 354 >gi|150024706|ref|YP_001295532.1| hypothetical protein FP0611 [Flavobacterium psychrophilum JIP02/86] gi|149771247|emb|CAL42716.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 361 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 119/358 (33%), Gaps = 5/358 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL +Y K YL T L LL + + +D+ E N++ E I + + Sbjct: 1 MLTILDKYILKRYLATFLVMLLLFIPIGITVDIAEKINKILENK-VPIDKVLSYYVDFII 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P + I L +E++ + GIS + L P+++G+ ++ F +L+ Sbjct: 60 YFTNFLFPIFLFLSIIWFTAKLANNTEIIAILSSGISFSRFLRPYIIGATIVSFFALLMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + + + K + + + + + + + Sbjct: 120 FFLAPKASEGFKNFRYLYLIGNGKDEMRETNDVYRQISETEFIYVSNFDIEAKTAYNFVF 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGF 237 +K + L + +NS + ++ Sbjct: 180 EKFNAEKLVYKISASSIQWNSKEKTYTLLNYSKRTVGALNDKIETENSKPMKFNFDLEDL 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + SF ++ K + K + Y IP+ +T+IA +VS Sbjct: 240 TPVVYIAETLSFTDLNKFIEKEKKRGSANINTYLVVKYRKYSIPISAFILTIIAVAVS-S 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + +A GI F + I + + + P+ A IP + L+ +L Sbjct: 299 MKRRGGMGMNLAIGIAIAFSYIFLDKIFATLAEKSSIEPIIAIWIPNFIFGILAFYLL 356 >gi|307154796|ref|YP_003890180.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] gi|306985024|gb|ADN16905.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] Length = 388 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 123/374 (32%), Gaps = 18/374 (4%) Query: 2 PGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 P I + Y F L+ + L I + SIS + ++ Sbjct: 14 PKIPSVDSYVFMELFIPFLFGMGLFTSLGIAIGTLFDIVRKVTESGLSISIALQILMLKM 73 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + P L+ ++ + L SEL+ R+IGIS ++LL P ++ S+++ T Sbjct: 74 PEFVVLAFPMSILLATLMGYSRLASDSELIAFRSIGISPYRLLVPSLILSLMVTGTTFFF 133 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +A + ++ + + + IL E F Sbjct: 134 SDYVAPQATQQAKSILADALKQDKPLQVEDNIIYPEYKKITQDNGRDQTILTRLFYAEKF 193 Query: 180 TSITIDKKNKIIHRK---------DADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNS 225 + + + + + + + Y R + Sbjct: 194 DGQQMQGLTILDRSQPGVNQIVTSQSAIWNVDQNSWDFYNGTIYLIAPDGSYRNIVRFEH 253 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS-NIFHNYRAETQFYFLIVIPLML 284 L++P K + A S E + + S N + E + +P + Sbjct: 254 QQLDLPRAPLDIAKRKQNPADMSIAEAKEYLKIVKLSKNDQRARKVEVRIQEKYALPFVC 313 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + LI +++ L+ + I F Y + I S G GI+ P +A +P Sbjct: 314 IVFGLIGSAIGLKPQ-NTNKATSFGVCIVLIFSYYLLSFITSSMGIWGIVTPTVSAWLPN 372 Query: 345 ILTISLSILILLQK 358 IL + ++ +L+Q Sbjct: 373 ILGLLAAMSLLVQT 386 >gi|251771422|gb|EES52001.1| permease YjgP/YjgQ family protein [Leptospirillum ferrodiazotrophum] Length = 361 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 122/358 (34%), Gaps = 7/358 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL R+ Y+K L+ + VID E + S A R Sbjct: 1 MKILTRHIMGEYIKIYFLSLVSLEAIYLVIDSVEKIKSFL-AHHAPWSLMGEFFAWRSIE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++IP L+ I+ ++ E+ RA GIS+ + P V+ LL + +L+ Sbjct: 60 VGFRVIPMSALLATILALGIASKNHEITAIRAAGISLGKATFPIVLFGALLSLIELLLNL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++++ + G ++ + + ++IF KI + T Sbjct: 120 WVVPHAYQTTDVIMEERINQGSGWSGEVRRNVWFRHGSREIF-RIAKIEQGGTRLDTVTI 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLNIPIKMDGF 237 K + +A + N V + + + + + F Sbjct: 179 YHKSPKADLQWTIEAKTLLYENGGWVFHDGVRTLFHKDGTLSSESFATLPFPLDRRPADF 238 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + ++ E+ + + + + H + L P M L A + Sbjct: 239 FIRKTHLSHLTYAELSRTIDLLKANGLPHKNFTVLRDGVL-AFPAASFLMVLFAIPFGIR 297 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + +T+ ++ + G+ G++ P+ AA ++ +++ + +L Sbjct: 298 EGRQVGIARGFGVALMLSLSYWTLYSMGLALGRGGVIPPLLAAWFANLVVLAVGLGLL 355 >gi|288803319|ref|ZP_06408752.1| membrane protein [Prevotella melaninogenica D18] gi|288334139|gb|EFC72581.1| membrane protein [Prevotella melaninogenica D18] Length = 377 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 119/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GIL Y K ++ T +Y +L + + V D NE ++ + + A VP Sbjct: 18 GILDWYIIKKFIGTYIYAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFVPYY 77 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+SI +L+ P+++ +L+ T + + Sbjct: 78 SNLFSPLFVFIAVIFFTSKLAGNSEIISMMAAGVSIRRLMRPYMISCVLIAGLTFYLNSF 137 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + ++++ ++ + N I + T Sbjct: 138 VIPHGTVIRQNFESLYRNSKKNTSAENVQLFVAKNTTAYIQHYDDQYKRGYGFSLVKTKN 197 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQK 239 + D K+ + S + ++ Sbjct: 198 KKIVSHMTAMEIQYDTVADTKYHWKVSNWKIRTLKGLKEHIQSGASKDTVLLMEPTDLVY 257 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E++ +S + + E +F+ I + +T+I S+S Sbjct: 258 SKGQQETFTSPELLNYISKQTSRGSGNVVQYEVEFHKRIAMSFSSFILTIIGLSLSSR-K 316 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F P+ AA IP I+ ++ Sbjct: 317 RKGGMGLYLGIGLALSFGYIMLQTVSATFAIQDDTPPILAAWIPNIIFAIIAYF 370 >gi|77361338|ref|YP_340913.1| hypothetical protein PSHAa2422 [Pseudoalteromonas haloplanktis TAC125] gi|76876249|emb|CAI87471.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125] Length = 370 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 129/356 (36%), Gaps = 8/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY LK+ + L M + L I E + + A ++P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVSILGDASE-GSIPAKLVLSMIALKLPQLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + I+ + + SE+ + +A G+S W ++ ++ S+ L I + + Sbjct: 61 SLILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSVGLAILAAALTMHV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L +Q K + + Q N + +FI + + + Sbjct: 121 APWASEQEYQLKEQAKADAGLSALRAGRFQQTGNEKAVVFIHNIENGGKELNKVFVAQLP 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +K+ + A+ ++ + + + L + + F +S Q Sbjct: 181 DSEKDNLARLVYAEQGVVIE----AQNGEQQLVLSDGKRYETDGLTPALNLTEFDGYSVQ 236 Query: 244 FASRSFYEIIKKMSFSNKSN--IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +K+ + + A Q+ + I IPL + +TL+A +S+ R Sbjct: 237 IREQEIEHQRRKLEAIPTNQLLALNTPEATAQWQWRIAIPLSIPLLTLLAVPLSVVNPRQ 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +V I + ++ K + G + P + + + L++++ Sbjct: 297 GKFAKLVP-AISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGGLLIIK 351 >gi|124514757|gb|EAY56269.1| putative permease, YjgP/YjgQ family [Leptospirillum rubarum] Length = 362 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 118/359 (32%), Gaps = 6/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K L + + VID E + ++ R Sbjct: 1 MRILTRYIASELFKIFLLCFISLEAIYGVIDSVEKIKDFLS-HHAALPLIGQYFFYRSIE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ ++ L++ EL RA GIS+ + PF+ +L+ + ++ + Sbjct: 60 VSFRVLPMSGLLATLLTLGILSKNHELTAIRAAGISLVKATKPFLALGVLISLISIAMNY 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + D G GA+ I + + Sbjct: 120 QLVPYAYQMTDYIKDVRIDQGKSGNVTFELNNVWFRHGNQDIYGARTIRDGGNELDKVVL 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLNIPIKMDGF 237 +D+ + + DA + + ++ + + F Sbjct: 180 YHLDRTFHLSWQVDAKTLRYHQGLWSFQDGHLTRFLPDGSLKIESFQKMDTTLTRRPVDF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + S+ E+ + ++ KS + E +I P+ M L+A + Sbjct: 240 TYEKTRMTHLSYPELDRYIALLEKS-HLPREKYEVTRDAMIAFPIAAFLMVLMAIPFGIR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + +TI ++ + GK G+LLP +A ++ +SI + L Sbjct: 299 EGRQVGIAKGFGISLLLSMSYWTIYSLGLALGKGGVLLPWISAWFANMIVFFVSISLFL 357 >gi|87121691|ref|ZP_01077578.1| permease YjgP/YjgQ [Marinomonas sp. MED121] gi|86162942|gb|EAQ64220.1| permease YjgP/YjgQ [Marinomonas sp. MED121] Length = 353 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 125/358 (34%), Gaps = 9/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K + + + L +V+ E ++ E Y+IS + R+P Sbjct: 1 MKQLDSYIGKGVVWAFFAVVFILLGLDYVLTFIEQVKRISEF--YTISNLLEVLLLRLPS 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP +L+ +V L TSEL + RA GI IW++ + +++ + V + Sbjct: 59 KFAEYIPIASLIGTLVGLGALASTSELTVIRAAGIPIWRIGWSAIKPILIISLIGVGISE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + ++ + K W++ I + + Sbjct: 119 FIAPNADQRANLIENLKKQQTSDNIISGGVWIRSEEKYIFI-----GAADQKGTLYNVKV 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + D+ L +V Q+ I+ N+T + Sbjct: 174 FNSKNQTLQSTQIAKTAQYKTADEWTLNQVTNTQFLADKIESNNTNFESLTMTFKPEHLY 233 Query: 242 EQFASRSFYEIIKKMSFSNKS--NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + +S+ N + R E +F+ + P+ +A+ LIA S Sbjct: 234 LATQEPEALSLSQSISYQNYLEGQDLNTSRYELEFWTKALRPVASIALVLIALSSVFGPL 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS+ + G+ G + + + + P+ LIP+ + +++ L L + Sbjct: 294 RSSTMGSRIFSGVMIGIIFQNGLNLFGRMSLAADFSPLLGVLIPIAICLAIGTLQLKR 351 >gi|90416561|ref|ZP_01224492.1| permease YjgP/YjgQ [marine gamma proteobacterium HTCC2207] gi|90331760|gb|EAS46988.1| permease YjgP/YjgQ [marine gamma proteobacterium HTCC2207] Length = 356 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 115/357 (32%), Gaps = 3/357 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L + K LL + L V + + + NY + + T VP Sbjct: 1 MMHRLSWHVGKTVFAAIAVTLLVLVGLDSVGAIIDQSADVTR--NYFFADAMIYVVTLVP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + IPF +L+ +V L SE+++ RA G+S +++ + ++ I + + Sbjct: 59 SRIYEYIPFASLIGCLVGLGLLAGNSEVIVMRAAGVSPLRIVGFVLKPVLIFIILGMTIG 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +++ + + Q S W + N + F Sbjct: 119 EYFSPYLDQLAEGKREYLRKGESAQDSSSGLWNREGNQFVHANAVFPGGVLYGVTRYQFN 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ R + Y + + + + + + Sbjct: 179 DERQIQEASFASRATFNSTERYWIEENVSVTRFLGDSTERDKLITRRWDSELTPNVLMLN 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S S + ++F NI E + + PL+++ + L+ S R Sbjct: 239 ILPADSLSIESLYSYIAFLELQNI-DTASYEVALWRKALQPLIIIGLVLLGISFVFGPLR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + G+ G ++ P+ A L+P++ + + + +L + Sbjct: 298 DSTMGFRIFIGVVFGISFRIFQDMLGPLSVVFQFPPLLAVLVPILFCVLVGVFLLRR 354 >gi|303258295|ref|ZP_07344302.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] gi|302859048|gb|EFL82132.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] Length = 378 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 55/378 (14%), Positives = 130/378 (34%), Gaps = 23/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ R F +K++L+ LL + L DL +G +YS+ + +L A +P Sbjct: 1 MKIVSRMIFAQIMKSSLFVLLTLVALFAFFDLIGQSGNIGT--SYSMGQAFLLTALILPT 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P ++ +I L TS+ + R GI W+ ++ I+L I L+ N Sbjct: 59 RCYEVLPIAVMLGSIFTLSRLASTSQFTVLRVSGIGPWRFCGMLLMPGIVLVICAYLLGN 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDK-QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +++ + + ++ D W++ + + + Sbjct: 119 LVAPPAQRLAKEFKLDISGSAFTGKELDSGIWVRDVQRNEAGEPKKISFVNVQRLRPGEA 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVV-------------------EYQYGRIPI 221 + + + ++ + Q Sbjct: 179 AYDWVVYVFDRPDHLTSIVTAKSGTYSEQEGWVLHDVVEETVPTLPKESREQTQARVERK 238 Query: 222 DKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP 281 S + + F + S E+ + + ++ R +T F+ P Sbjct: 239 VMKSMVWGKSLDGNIFGLLMIKPEDMSLQELHYYIEYLKENGQ-TYKRFDTAFWSKAFYP 297 Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 L ++ M L++ + + +R+ I + GI G Y + + + + +A+ Sbjct: 298 LAILVMLLLSMPFAYQNARAGGMAIKIFCGIMIGIFYYALNNLFAFMSALDSVPSIISAI 357 Query: 342 IPVILTISLSILILLQKE 359 +P ++ +I+ + E Sbjct: 358 LPSVMMTLAAIIAMWYVE 375 >gi|119944177|ref|YP_941857.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] gi|119862781|gb|ABM02258.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] Length = 354 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 116/344 (33%), Gaps = 4/344 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 GIL RY K T L + L +I E +G + +Y A ++P+ Sbjct: 1 MGILDRYIGKTIFAATFLSLFVLIGLSSIIKFVEQMGSIG-VGSYDAWNAAYFVILKIPI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L+ ++ +L +SELV+ +A GIS ++ + +I + I +++ Sbjct: 60 ELSVFFPMAALIGALIGLGSLANSSELVVMQAAGISKLRIAGAVLKTAIPMVIVVMVLTE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +K + K + + W++ ++ I K + F Sbjct: 120 FVVPITDKEAYSMRYMAKRGEVQVSNQYGVWVKDADSFVSIERMNSKNELFHVQLYFFDE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + V + ++ + + Sbjct: 180 NLKLDHAILARKAAFKEGSWFFGDVSQTN--FLEDRTEVKRMSNYIWETKLTPKKLEVIL 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S +I + + +N R F+ V+P +V M L++ S RS Sbjct: 238 GEPDKMSMRDIYNYIIYLE-NNEQDAKRFWLIFWRKAVLPFTIVVMMLLSVSFIFGGLRS 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + +GI +GF Y + F P+ AL+P Sbjct: 297 VTMGTRLIFGIAAGFTFYVSGELFGPFSLVFNWPPILGALLPSF 340 >gi|303237034|ref|ZP_07323604.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] gi|302482421|gb|EFL45446.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] Length = 408 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 117/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G+L Y K ++ T ++ ++ + + V D NE ++ + + A +P Sbjct: 49 GLLDWYIIKKFIGTYIFSIVLIISIAIVFDFNENLSKFTQYHAPWRAIIFDNYANFIPYY 108 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A GIS +L+ P+++ IL+ T + + Sbjct: 109 SNLFSPLFVFIAVIFFTSKLAGDSEIISMLAAGISFNRLMRPYMISCILIAGVTYYLNSS 168 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + ++++ + I N I D Sbjct: 169 VIPHGTVIRQNFNALYRNDKKNTTGENIQLKVAKNTVAYIQHYDNTYKRGYGFSLDRFEG 228 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D K+ + + + I ++ Sbjct: 229 KKLVDHLTATEIQYDTIADSKFHWKVTNWKIRKLKGLKEHITTGAEMDTVILMEPTDLIY 288 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 F Q + +++ +S + + E +F+ I + +T+I S+S Sbjct: 289 FDGQQEEFTSSQLLDYISKQTSRGSKNVIQYEVEFHKRIAMSFSSFILTIIGLSLSSR-K 347 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ + I +F + P+ AA IP I+ +++ Sbjct: 348 RKGGMGMYLGIGLALSVSYILLQAISSTFAINTNASPMLAAWIPNIIFAAIAYF 401 >gi|114768925|ref|ZP_01446551.1| permease, YjgP/YjgQ family protein [alpha proteobacterium HTCC2255] gi|114549842|gb|EAU52723.1| permease, YjgP/YjgQ family protein [alpha proteobacterium HTCC2255] Length = 366 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 66/367 (17%), Positives = 144/367 (39%), Gaps = 11/367 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L YF K YL + + L ++LV + D N++ I +L+ R + Sbjct: 2 TLAIYFGKRYLISFIRVFLSIVLLVLLFDFLTNLNRL-NGIEAQIWNALILSLLRTTTYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P I ++ + +L+R++E ++ RA G+S + L P + + LG+ ++ +++P+ Sbjct: 61 SLAMPLIIMLSALAFSVSLSRSNEFIVLRASGVSALKGLFPVISSAFFLGLISIFMLDPL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A + + + Q +D WM+ + I A + T Sbjct: 121 AGKMIGYYNIKLDKLRSKEQSQVLINDNGYWMRQATLNGHQIIKAVNVSNNGQRLHQVTI 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY-------QYGRIPIDKNSTTLNIPIKM 234 D+ + R ++ A + N+++ L +++ + I Sbjct: 181 FNYDENGLVTERFFSESAALGNNELLLTNAIKWSDTKIKKNPIIANEKIKKLKIKTEITP 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + S + + K++ S F + +++ P + + M ++ Sbjct: 241 TQLLDGYASPETISPWNMNKQIQKVKSSG-FSVLKYQSKKMEQYARPFLFIVMVVLGTVF 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +L+ SR+ I V + SGF L+ + G+SG + + A P++ +++ + Sbjct: 300 TLQNSRARNVGISVVLAVASGFFLHFFQNFCTTLGRSGEIPLIIATWSPILSIGLIAMTL 359 Query: 355 LLQKEDG 361 L EDG Sbjct: 360 FLHYEDG 366 >gi|94311741|ref|YP_584951.1| permease YjgP/YjgQ [Cupriavidus metallidurans CH34] gi|93355593|gb|ABF09682.1| predicted permease [Cupriavidus metallidurans CH34] Length = 387 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 117/380 (30%), Gaps = 30/380 (7%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RYF + + L + L D+ + Y+ P I ++ Sbjct: 9 RYFARLIYGVFAFILFAVLALFVFFDMLSELESV--QGKYTSLIAFFHVMLEAPTRIYEV 66 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I VF L SE I R G++ Q L ++ L + T + I + Sbjct: 67 LPIAVLISAIYVFSQLASQSEYTIFRVAGLNTRQALFSLFKLAVPLALATFIFGEFIGPA 126 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD-------IFIGAKKILPENHIWEDF 179 E+ + + W++ + + + + L + Sbjct: 127 AEQYAQKIKLEAIGATVSSGFRSGVWVKDRDREPEEKGAGEITRFVNVQGLRPDQSITGV 186 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVK--------------------LKKVVEYQYGRI 219 T DK ++ + A + + + + Sbjct: 187 TIYEFDKDYRLRVIRVAKEGKYQGGQSWQLNDVNETRFIELRDGQPAANRDALAPDFRGE 246 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 + + ++ + Q + S + + + N R E F+ +V Sbjct: 247 QVQFPNILMHSELTPQILSVLLVQPENMSTVNLFRYIRHLRD-NKQDTQRYEIAFWKKVV 305 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 PL L M +A + +R+ + V GI G + T+ G P+ + Sbjct: 306 YPLTLFVMVALALPFAYLHARAGAVGVKVFGGIMLGLSFHLSNTLFSHVGLLHTWPPIVS 365 Query: 340 ALIPVILTISLSILILLQKE 359 AL+P L + +++ L + Sbjct: 366 ALVPGTLYLMIALGALRWVD 385 >gi|237747611|ref|ZP_04578091.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378973|gb|EEO29064.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 381 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 63/381 (16%), Positives = 107/381 (28%), Gaps = 25/381 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RYF L++ L+ L + L DL + +G Y + + P Sbjct: 1 MKILQRYFLSQILRSVLFVLFAFLGLFAFFDLIGELSSVG-RGGYQLQHVLIYILLGFPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +++PF L+ I SE I R +S ++ +FT LV Sbjct: 60 YIYELMPFAVLIGTIYALAMFASNSEYTIMRVSSLSTLDACWMLAKVGLVFLVFTFLVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI-------FIGAKKILPENH 174 I ++ + W + + + I K + + Sbjct: 120 VITPVSARVATEFRNNLIGRAVGDGFRTGMWSKDTIRKDGIDGPVIGSRFMNVKKMQPDG 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ----------------YGR 218 E + ++ A A + V Sbjct: 180 TLEQIRLYEFNDNLELTKTVSAKNARYLGNHEWQLNEVVESHLTAANTKNKKFPDSAPSL 239 Query: 219 IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 +S + I D S S YE+ N + F+ I Sbjct: 240 NTKKLDSLIMVSDITPDILSVISVDANKMSAYELAIYNQHL-VENKQDATSYQMAFWKKI 298 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 + P + M +A + RS + + GI G I + G P Sbjct: 299 IYPFSVFVMMALALPFAYLHFRSGGVSLKIFSGIMIGVAFILINNLFSHVGLLNTWPPFL 358 Query: 339 AALIPVILTISLSILILLQKE 359 A+IP L +++ L E Sbjct: 359 TAVIPSALFFLSAVIALWWVE 379 >gi|306842049|ref|ZP_07474722.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] gi|306287890|gb|EFM59310.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] Length = 286 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 84/287 (29%), Positives = 150/287 (52%), Gaps = 2/287 (0%) Query: 76 IVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLI 135 + +LNR ELV++R++G+S WQ L P G++L G+ T+ ++NP+A G ++ Sbjct: 1 MATLISLNRKYELVVARSVGVSAWQFLLPACFGALLFGLATIFILNPLAAHGFSKAEEIA 60 Query: 136 QQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRK 194 WK S PW++ + + IGAK IL + D T I D++ I R Sbjct: 61 AMWKTGKVTDVSALRDPWLRQKTDEGETIIGAKSILNQGTTLADATFIQFDEQKNIKDRY 120 Query: 195 DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIK 254 DA A + + +L V+ + G+ P + ++ ++ + ++ + F ++ Sbjct: 121 DARTATLQDGYWELTDVMRFARGQEPQKLETFRISTQLRPEYVEEKLASPETIPFTQLRH 180 Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 K+ + + + Q+ L+ +P +L+AMTLIAA+VSL+F R Q ++ G+ + Sbjct: 181 KIEVARSFG-YSANAFDMQYQSLLALPALLMAMTLIAATVSLKFVRFGQSGAMILGGVIA 239 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 GF+LY + ++K+FG +G + P AA +PV++ + LL KEDG Sbjct: 240 GFVLYVVSVLVKAFGDAGFVPPFVAAWVPVVIATFFGVSFLLHKEDG 286 >gi|118581151|ref|YP_902401.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118503861|gb|ABL00344.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 354 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 119/357 (33%), Gaps = 4/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY + + L L L+ +L + + +G+ Y +S + + +P Sbjct: 1 MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGK-GRYDVSDALLYVSLTLPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ P L+ +I+ L + EL RA GIS+ ++ F+ ++L + +L Sbjct: 60 RMLEMAPPSALLGSIIALGLLAKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + E+ + W + I + + + Sbjct: 120 FIIPTLEQTAWTRRETALSKSGTLLPRGGFWTRDERR--FINLRTARDNGVQAVDIYEFD 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I R+ A + + + + G L + + Sbjct: 178 NRDALTGYIHGRETRIGANGNWELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALT 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S E+ +S K + R + + +P++ AM +++ + +RS Sbjct: 238 LPPQTLSISELSGTISNLQKR-EQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARS 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + G G + + + I+ G + P L P + ++ ++ + Sbjct: 297 ASLGWHIMIGAIFGVVFFYLNQILGYTGLILQVSPFWTTLFPALAVLAGGAILTRRI 353 >gi|206602448|gb|EDZ38929.1| Putative permease, YjgP/YjgQ family [Leptospirillum sp. Group II '5-way CG'] Length = 362 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 117/359 (32%), Gaps = 6/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K L + + VID E + ++ R Sbjct: 1 MRILTRYIASELFKIFLLCFISLEAIYGVIDSVEKIKDFLS-HHAALPLIGQYFFYRSIE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ ++ L++ EL RA GIS+ + PF+ +L+ + ++ + Sbjct: 60 VSFRVLPMSGLLATLLTLGILSKNHELTAIRAAGISLVKATKPFLALGVLISLISIAMNY 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + D G + GA+ I + Sbjct: 120 QLVPYAYQMTDYIKDVRIDQGKTGRVTFELNNVWFRHGNQDIYGARTIRDGGSELDKVVL 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLNIPIKMDGF 237 +D + + DA + + ++ + + F Sbjct: 180 YHLDSTFHLSWQIDAKTLRYHQGLWSFRDGRLTRFLPDGSLKIESFQKMDTTLTRRPVDF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + S+ E+ + ++ KS + E +I P+ M L+A + Sbjct: 240 TYEKTRMTHLSYPELDRYIALLEKS-HLPREKYEVTRDAMIAFPIAAFLMVLMAIPFGIR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + +TI ++ + GK G+LLP +A ++ +SI + L Sbjct: 299 EGRQVGIAKGFGISLLLSMSYWTIYSLGLALGKGGVLLPWISAWFANMIVFFVSISLFL 357 >gi|17547136|ref|NP_520538.1| hypothetical protein RSc2417 [Ralstonia solanacearum GMI1000] gi|17429438|emb|CAD16124.1| putative permease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 401 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 52/402 (12%), Positives = 111/402 (27%), Gaps = 46/402 (11%) Query: 1 MPGIL-----WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLA 55 M IL +YF + ++ L + L D+ + Y+ Sbjct: 1 MMKILKMQVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGR--YTTLIAFFHV 58 Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 + P + ++IP L+ I VF + SE I R G+ + L ++ L + Sbjct: 59 MLQAPTRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALV 118 Query: 116 TVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAK 167 T + I E+ + + W++ P + F+ Sbjct: 119 TYVFGEFIGPKSEQFAQKVRLEALGATVSSGFRSGVWVKDRGPARPDGSGGEVTRFVNVG 178 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------------- 214 + P I R + +L V E Sbjct: 179 TLQPNQTIQGLRIYEFDANYRLSSIRVAQQARYQGHQHWELNDVTETRFIEFPRHAGAAT 238 Query: 215 -----------------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + + + ++ + + Sbjct: 239 PQDSKQAVPGAPDALAPDFRGEQTRLPKQDMRSELTPQILSVLMVTPDRMATLDLFQYIR 298 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 N R E + +V P ++ M ++ + +R+ + V GI G Sbjct: 299 HLRD-NKQDTQRYEIALWKKVVYPFTVLVMMALSLPFAYLHARAGAVGLKVFGGIMLGLS 357 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + G + A++P L ++++++ L E Sbjct: 358 FQLVNNLFSHVGLLNTWPAIFTAILPGALYLAVALVALRWAE 399 >gi|114776388|ref|ZP_01451433.1| hypothetical protein SPV1_01672 [Mariprofundus ferrooxydans PV-1] gi|114553218|gb|EAU55616.1| hypothetical protein SPV1_01672 [Mariprofundus ferrooxydans PV-1] Length = 352 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 123/362 (33%), Gaps = 15/362 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +++R+ F L +L + + + +I+ + +G ++P Sbjct: 1 MP-VVFRWIFSGCLSRSLVTMSALLAIFVIIESFDKARYLG--HGLDGRLMVEYMLLKIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ + +P I L+ + L+R E+V RA G+ I ++L P ++L + + ++ Sbjct: 58 FMLSEFMPVIMLIGASLYLIELSRNQEVVALRAAGLGINKVLLPLSSVALLAALASFIIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + Q + + + ++ P + Sbjct: 118 EWVTPVTNTRLDQIEQVHIQHKKSSQPGVQWLKD--------GHRFFRLTPLTNHQFALL 169 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI--PIDKNSTTLNIPIKMDGFQ 238 + + R D+ A L + + + + Sbjct: 170 MLKTAPDGAWLQRIDSPRAHYSQGVWSLSDARVSTPSSDQVMHVEKLKNMEVKSAIGPET 229 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + F E+ ++ + + + PL + M ++AA++ L Sbjct: 230 ADLPKPGHMDFSELYHYINNLKHAGLGAGT-YVYALHRKFSAPLACLLMVIMAAALCLHT 288 Query: 299 -SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R+++ + I G + Y I S + P AA +P ++ ++ +LL+ Sbjct: 289 GNRNSRASWGLMLSISLGLVFYVIGNAGYLLAASNRIPPAFAAWLPSLVFGGTAVFLLLK 348 Query: 358 KE 359 +E Sbjct: 349 RE 350 >gi|294084201|ref|YP_003550959.1| permease YjgP/YjgQ [Candidatus Puniceispirillum marinum IMCC1322] gi|292663774|gb|ADE38875.1| permease YjgP/YjgQ [Candidatus Puniceispirillum marinum IMCC1322] Length = 368 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 153/362 (42%), Gaps = 4/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMG-ELPNYSISRGAVLAATRVP 60 G L+RYF YY + L L G +++ VI E+ Q + +VLA +P Sbjct: 7 FGTLFRYFAFYYTRWILLCLFGLTVIISVIQSVELMRQKSVNKSDVEEISVSVLAMLNLP 66 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II+ I+PF L+ ++ F N+++E V++R G SIW L+P +V ++ +G+ V+VI Sbjct: 67 NIIEVILPFAVLIGTMLCFHAWNKSNEFVVTRGFGQSIWVSLSPVLVSALAIGVLFVMVI 126 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 NPI K + D+ + S+ W++ I I + + + Sbjct: 127 NPIGAVTSKRYNSQMATLNDDISNNLTISESGIWLRDMQDNVKIIINGDALDMKTAQISN 186 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + ++ R A + ++ +++ + + + + ++ Sbjct: 187 PTIYSFVNGFELNWRVQAQSIQLTQMGWEVVDGIKWDSDGLQNELGTFIIPTNLEAVDLT 246 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S S Y + ++ ++ + E F ++ P +LV +++IA +++ Sbjct: 247 RSGQSPHSISIYALPHFITVLERAGLPTIN-HEIHFNKILAFPFLLVGISMIATRITVRS 305 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + +V G+ ++ +M G S + + A P I + + ++L + Sbjct: 306 INRGRQMKLVIKGLGIATCIFIFSYLMHVMGTSLTVPALVAGWTPAITVLLIGSIMLARL 365 Query: 359 ED 360 ++ Sbjct: 366 DE 367 >gi|285019431|ref|YP_003377142.1| permease [Xanthomonas albilineans GPE PC73] gi|283474649|emb|CBA17148.1| putative yjgp/yjgq family permease protein [Xanthomonas albilineans] Length = 368 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 120/360 (33%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y + L T L + L ++ L+ +G+ +YS+ A VP Sbjct: 9 DLYVGRAVLGTVLLTWAVLLGLDVIMALSNEFKDIGK-GSYSLGHAVAYVAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S +L +L + V + Sbjct: 68 LFPTGAVIGVLMGLGQLAATSELTALRALGLSRRRLSLAAAATMTVLIVAMVFSGETLGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENH---IWEDFTS 181 + + K N + + W + + + G + + D Sbjct: 128 WAQNQADVIKANAKFNSNMSMARYSGLWAREGDTFLNAQAGEEHLQDGGGSWLELRDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 ++D+ ++ A A + + LK+ + +S + Sbjct: 188 YSLDQNGRLATLTHASSAEHHANGWTLKQGYRDTFAERSVQRETFDSQPWPSQLDAAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +++ + + ++ E Q++ P+ ++A+ A + Sbjct: 248 SGLAKPRNLSAHDLHVSIEYRQRNG-LDARDYEDQYWSRWFYPINVLALCFAAIPFAFGA 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS + GI + + + + A +P ++ +++S L+ ++ Sbjct: 307 LRSGGMGKRLFLGILFALVFWLLQLFFGRMAGALKFDYRIAYALPPLVMLTVSWLMFRKR 366 >gi|332707452|ref|ZP_08427501.1| putative permease [Lyngbya majuscula 3L] gi|332353803|gb|EGJ33294.1| putative permease [Lyngbya majuscula 3L] Length = 388 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 111/361 (30%), Gaps = 18/361 (4%) Query: 1 MPG--ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 MPG ++ RY + L+ + L I + + + + Sbjct: 13 MPGLSVMDRYIVFELIPPLLFGIGAFSSLGVAIGTLFELVRKVTEAGLPLGIALQVLLLQ 72 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +P I +P L+ ++ + L+ SEL+ R+ G+SI++L+ P VV S+L+ T + Sbjct: 73 IPQFISYALPMSMLLAALMAYSRLSSDSELIAMRSFGVSIYRLVIPAVVVSLLVTSLTFV 132 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP---------QQDIFIGAKKI 169 + + + + + + + + Sbjct: 133 FNELVVPAANYQSKITLDKALKKERPSFQERNIFYPEYQKVKLPNGKKVNKIKRWFYAEQ 192 Query: 170 LPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKN 224 + + I ++ + + Y R + Sbjct: 193 FDGKQMRGLTILDFSQTGLEQIVTSESAVWNPTENLWDFLDGTIYIISPDASYRNILRFQ 252 Query: 225 STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLM 283 L +P K + + + + ++++ S R + I P + Sbjct: 253 KQKLQLPRTPLDLAKKNRDYGEMNIAQSLERLEVLRHSGNAKKIRKLRIRIQQKISFPFV 312 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + L+ AS+ R+ + + F Y + I + G I P+ AA +P Sbjct: 313 CLVFGLVGASLGTRPQRTGK-ATSFGISVLVIFSYYLLGFITNALGLVNIFSPLMAAWLP 371 Query: 344 V 344 Sbjct: 372 N 372 >gi|331001131|ref|ZP_08324762.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] gi|329569436|gb|EGG51214.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] Length = 378 Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 55/378 (14%), Positives = 130/378 (34%), Gaps = 23/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ R F +K++L+ LL + L DL +G +YS+ + +L A +P Sbjct: 1 MKIVSRMIFAQIMKSSLFVLLTLVALFAFFDLIGQSGNIGT--SYSMGQAFLLTALILPT 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P ++ +I L TS+ + R GI W+ ++ I+L I L+ N Sbjct: 59 RCYEVLPIAVMLGSIFTLSRLASTSQFTVLRVSGIGPWRFCGMLLMPGIVLVICAYLLGN 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDK-QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +++ + + ++ D W++ + + + Sbjct: 119 LVAPPAQRLAKEFKLDISGSAFTGKELDSGIWVRDVQRNEAGEPKKISFVNVQRLRPGEA 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVV-------------------EYQYGRIPI 221 + + + ++ + Q Sbjct: 179 AYDWVIYVFDRPDHLTSIVTAKSGTYSEQEGWVLHDVVEETVPTLPKESREQTQARVERK 238 Query: 222 DKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP 281 S + + F + S E+ + + ++ R +T F+ P Sbjct: 239 VMKSMVWGKSLDGNIFGLLMIKPEDMSLQELHYYIEYLKENGQ-TYKRFDTAFWSKAFYP 297 Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 L ++ M L++ + + +R+ I + GI G Y + + + + +A+ Sbjct: 298 LAILVMLLLSMPFAYQNARAGGMAIKIFCGIMIGIFYYALNNLFAFMSALDSVPSIISAI 357 Query: 342 IPVILTISLSILILLQKE 359 +P ++ +I+ + E Sbjct: 358 LPSVMMTLAAIIAMWYVE 375 >gi|307543949|ref|YP_003896428.1| permease [Halomonas elongata DSM 2581] gi|307215973|emb|CBV41243.1| K07091 [Halomonas elongata DSM 2581] Length = 354 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 119/356 (33%), Gaps = 12/356 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L + + L VI + +Y + R+P Sbjct: 6 LDRYIARNVLGAILVVQVVLLGLDLVITYINDLGDV--EGDYGALQVFFYLVMRLPWRFY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q P L+ ++ + ++EL + RA G S+ ++L + IL+ + + ++ Sbjct: 64 QYAPVGVLIGALIGLGGMASSNELTVMRAAGRSLARILWGVMKPVILVIAVVLFIAEFVS 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 S E+ + ++ W + + + + Sbjct: 124 PSTEQYASAWRLEKMQGEGAVLTERGGWQREGDSFYRFGAIRVDNVVLDLT------RYR 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY---GRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ A A+ + L+ V ++ + + + + Sbjct: 178 FEGRELREAVSARRAVWRDGGWVLENVDITRFVDGRTEVTHQATRPWQTELTPAELNRLL 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +++ E+ + + F+ +++PL + ++ L+AAS RS Sbjct: 238 RRVETQAPSELWAHARYLEAQGQ-DATQPLLYFWQKMLMPLTMASLMLVAASFVFGPLRS 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V YG+ +G + + ++ P A L P ++ +L +L + Sbjct: 297 VAAGTRVFYGVITGLVFKYLQDLLGPASTVFGFSPAWAVLAPTLICAALGFYMLRR 352 >gi|300866498|ref|ZP_07111188.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335455|emb|CBN56348.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 369 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 107/354 (30%), Gaps = 15/354 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y K + L+ + + + + S + ++P I Sbjct: 2 DWYLTKELIGPFLFGVGLFSSVGVTVGAVFELVRRVTESGLPFSTAIQIFLLKMPYFIVL 61 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 P L+ +++ + ++ SE+V R+ GI++++L+ P V+ S+ + T + I Sbjct: 62 AFPMSMLLASLMAYSRMSSDSEIVALRSCGINVYRLVVPAVILSLAVTGMTFAMNELIVP 121 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAKKILPENHIWE 177 + + + + + + + + Sbjct: 122 AANYQATVTLDRALKREKPLFQEKNIFYPEFRNVDKGNGEESVLTRLFYAEQFDGKQMKG 181 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLNIPI 232 + I ++ + + Y R + L +P Sbjct: 182 LTILDRSQPELNQIISSESAIWNPAQNSWDFFNGTVYIVAPDGSYRNIVRFEHQQLQLPR 241 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLIA 291 + + + + I ++ S R + + +P + + L+ Sbjct: 242 TPLDLAAKARDYGEMNIAQAIDYLNLIRSSGDEQKIRKLKVRIQEKYALPFVCIVFGLVG 301 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 A++ + R+ + + F Y I S G IL PV AA +P+I Sbjct: 302 AALGTKPQRTGR-ATSFGISVIVIFTYYVFSFITSSMGLKAILTPVMAAWLPMI 354 >gi|86158886|ref|YP_465671.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] gi|85775397|gb|ABC82234.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] Length = 360 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 119/360 (33%), Gaps = 9/360 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL+RY + L L L G + + +D + L A + ++ Sbjct: 2 ILFRYVARRMLGAFLVALAGVVGIYLAVDFVDNAAAYTGAGWLPA--VLQLYAYKAAGVV 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P ++ + +T E RA+G+ W+L P + ++L G V++ + + Sbjct: 60 YMVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDVV 119 Query: 124 ATSGEKIGIDLIQQW--KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + ++ + + + + +E T Sbjct: 120 GVQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGVDGKRVYHLRGNLPDGGFERVTV 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGF 237 + + + R DA L+ V + + D F Sbjct: 180 YELSEAFTLARRIDAARMHPDGRAWILEDVEDRTFRPDGSMALERAERKRYAFDEPPDAF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + +I+++ + + + Y + P + L+A +++L Sbjct: 240 AVIAGKPDQMRWSTLIRQIGIRKRLGQP-VTEFQLERYDRLAYPFAGIPGALLALALALR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + + + + + + G SG + P A+ P ++ ++L + + + Sbjct: 299 RDRKGHLSAALLEAVGVTLLFWGMQGVSSALGLSGRVAPWVASWAPNVVFLALGAIAVHR 358 >gi|148242360|ref|YP_001227517.1| permease [Synechococcus sp. RCC307] gi|147850670|emb|CAK28164.1| Predicted permease [Synechococcus sp. RCC307] Length = 403 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 101/354 (28%), Gaps = 15/354 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 R+ L L+ + + + + + + + R+P + Sbjct: 34 DRWLTGELLGPLLFGIAAFTAVTLSVGVLFELVRKVAEAGLPMGVAVQVLFLRLPGFLVL 93 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 P TL+ ++ + L+ SEL R+IG++ ++ + P +V + L+ + T + + + Sbjct: 94 SFPMATLIATLLAYSRLSGGSELTALRSIGVATYRFVIPGLVLAGLMSVLTFVFNDVLVP 153 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS--------------NPQQDIFIGAKKILP 171 + G ++ + + + Sbjct: 154 PANRAGYVMLHKSLGRSIDSEKGGNIIYPRYGRVTDGPKDNKERLIQLFYAKEFKDGKMM 213 Query: 172 ENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP 231 + + + + + + + V + D N+ + Sbjct: 214 DVTLIDFSRAGQKQLLSAEEAVFMEGRGTWEFRRGSIINVADRGGRNTTADFNTYYYPLG 273 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLI 290 + S E + + ++ R + P + + LI Sbjct: 274 EGPLDLASLPKDVNVMSVAEANQALEIIEEAGDRKAARKMRVRLQEKFSFPAICLVFGLI 333 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 AS+ + + F+ Y + + S G G L P +A PV Sbjct: 334 GASLGSRPNTRTSRSQGFGISVLLIFVYYLLAFVFSSLGVKGTLTPFLSAWTPV 387 >gi|197121804|ref|YP_002133755.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] gi|196171653|gb|ACG72626.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] Length = 360 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 122/360 (33%), Gaps = 9/360 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL+RY + L L L G + + +D + + L A + ++ Sbjct: 2 ILFRYVARRMLGAFLVALAGVVGIYLAVDFVDNASAYTGAGWLPA--VLQLYAYKAAGVV 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P ++ + +T E RA+G+ W+L P + ++L G V++ + + Sbjct: 60 YMVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDAV 119 Query: 124 ATSGEKIGIDLIQQW--KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + ++ + + + + +E T Sbjct: 120 GVQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGMDGKRVYHLRGNLPDGGFERVTV 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGF 237 + + + R DA L+ V + + + D F Sbjct: 180 YELAEGFTLARRIDAARMHPDGRAWILEDVEDRTFRPDGSMALERADRRRYAFDEPPDAF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + +I+++ + + + Y + PL + L+A +++L Sbjct: 240 AVIAGKPDQMRWNTLIRQIGIRKRLGQP-VTEFQLERYDRLAYPLAGIPGALLALALALR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + + + + + + G SG + P A+ P ++ ++L + + + Sbjct: 299 RDRKGHLAAALLEAVGVTLLFWGMQGVSSALGLSGRVAPWIASWAPNVVFLALGAIAVHR 358 >gi|332535155|ref|ZP_08410964.1| putative permease [Pseudoalteromonas haloplanktis ANT/505] gi|332035425|gb|EGI71924.1| putative permease [Pseudoalteromonas haloplanktis ANT/505] Length = 370 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 127/359 (35%), Gaps = 14/359 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY LK+ + L M + L I E + + A ++P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVGILGDASE-GSIPAKLVLSMIALKLPQLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + I+ + + SE+ + +A G+S W ++ ++ S+ L I + I Sbjct: 61 SLILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSVGLAILAAALTMYI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L +Q K + + + N + +FI + + + Sbjct: 121 APWASEQEYQLKEQAKADAGLSALRAGRFQETGNEKAVVFIHNIEKGGKELNKVFVAQLP 180 Query: 184 IDKKNKIIHRKDADL-----AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 +K + A+ A+ ++ L Y+ N T + Q Sbjct: 181 DSEKGNLARLVYAEQGVVVEAVNGEQQLVLTDGKRYETDGTTPALNLTEFDGYSVQIREQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + Q + ++ + + Q+ + + IPL + +TL+A +S+ Sbjct: 241 EIEHQRRKLEAVPTNQLLAI-------NTPESIAQWQWRLAIPLSIPLLTLLAVPLSVVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +V I + ++ K + G + P + + + L++++ Sbjct: 294 PRQGKFAKLVP-AISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGGLLIIK 351 >gi|325104566|ref|YP_004274220.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] gi|324973414|gb|ADY52398.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] Length = 364 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 123/356 (34%), Gaps = 4/356 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 ++ Y + YL T ++ + ++ V D++E + + A +P Sbjct: 9 KLIDWYIIRKYLGTFVFTMAIFTLISVVFDISEKLDDFLKSRATFSQVVFEYYAGFIPFY 68 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + + P I + I + +E+V G S + L P+ V + ++ IF + Sbjct: 69 LNFLNPLINFISVIFFTAKMADQTEIVPILTSGASFNRFLRPYFVAATVIFIFNIGFNLF 128 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ I+ + D ++++ + + + E F Sbjct: 129 VIPETNRLMINFENTYTKIKDTSRNNVHLQLDSNTYIYMESFDNLRNSGYKFSLEKFDKK 188 Query: 183 TIDKKNKIIHR-KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +K D+ + ++ V + TTL++ F Sbjct: 189 DLKEKLMADRISWDSVSHKWKIENYTIRYVDGLKEKMENGTVKDTTLDMK--PIDFDIRD 246 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +++ +F+E+ +K+ E + Y P +TLI ++S R Sbjct: 247 NIYSAMNFWELNEKIEKEKIRGSGVMVNLELEKYKRWTYPFSTYVLTLIGVALSSRKVRG 306 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I F+ I F G L P+ A LIP +L +L + + ++ Sbjct: 307 GVGLPLGLG-ILLSFVYILFIQFANVFALKGGLPPIIAVLIPNMLFGALGVYLAIK 361 >gi|320353217|ref|YP_004194556.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] gi|320121719|gb|ADW17265.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] Length = 508 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 130/364 (35%), Gaps = 11/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P +L+ Y L L + F++ L + + L ++ L + P Sbjct: 32 PLLLYSYIANELLAPFFASFLILYCVFFLVRLIPLLEVVLALR-IGLADFIRLFSYIFPR 90 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IIP ++ IV F L E++ +A G+S+ Q+L P ++ + + T Sbjct: 91 MLLYIIPMASMAGVIVGFTRLTNDREILALKACGVSLKQMLPPVILIAAAIATLTGFFSI 150 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW--------MQISNPQQDIFIGAKKILPEN 173 + +G L+ + + + + + + Sbjct: 151 RLIPAGALGFKQLMFELAKEKIDKGLKAREFTEALGDIVVYVDEIDDQQRWHGVYVSDMR 210 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + ++ + + ++ + + + + Q R + +L P + Sbjct: 211 GRTQPLITVAKSGHMEAEMERMTVTIVLNDGTLHNNEGTDNQVVRFGRYQLQISLRPPTQ 270 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + S+ + S ++++ + ++ H ++++ + +P+ ++++ Sbjct: 271 IGKEDVTSQTRGAMSQQQLLRAAAKQKPNSKLHR-IFLSEYHHRLALPVGCFILSILGLP 329 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + L+ + + + + G+ + Y T + + G L V +P IL L+++ Sbjct: 330 LGLQAA-PGRRAVGIPLGLVVFVLYYIAFTTARVMSEEGTLPLVLGMWLPNILFSVLTVV 388 Query: 354 ILLQ 357 I + Sbjct: 389 IFWR 392 >gi|22299113|ref|NP_682360.1| hypothetical protein tll1570 [Thermosynechococcus elongatus BP-1] gi|22295295|dbj|BAC09122.1| tll1570 [Thermosynechococcus elongatus BP-1] Length = 378 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 119/367 (32%), Gaps = 11/367 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 +P L +Y L + L L + + ++ L ++P Sbjct: 13 LPK-LDQYLLSLLLPGFVLGLTVFTTLALTVGTIFDLVRQIADAQLPLTILLQLIGYQLP 71 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ + P L+ + L+ E + R++GI + ++L P VV ++L+ T+ + Sbjct: 72 AVLVLVFPMAVLLAVVGAMSRLSEEGEWIALRSVGICLGRVLIPVVVFALLVSGLTLALN 131 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + L+ + S + + ++ + + T Sbjct: 132 ETAVPIAKYESKKLMGELLQQERSLGSGTDIFYPEYDRHGNVRRLYYGHRFDGSRIQGIT 191 Query: 181 SITIDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQYGR-----IPIDKNSTTLNIPIKM 234 + + ++ + + L + + Y + + + +P Sbjct: 192 VLDFSQPQVTQVISAESAEWNVRESRWLLSQGIAYLISHTGVSRNLLQFDQQEIRLPRPA 251 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLIAAS 293 S + + + + RA + P + V L+ Sbjct: 252 QSQPLRPTDVNELSITQARRALQRLDPDREPELVRALKVHLAQSYAQPFLAVVFALLGVG 311 Query: 294 VSLEFS-RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 L S R + ++ + F Y + + + G +G L P+AAA +P + + ++I Sbjct: 312 FGLSPSQRRGRQGFGISVAVV--FGQYVLTFFLGALGTTGTLSPLAAAWLPHSIGLVVAI 369 Query: 353 LILLQKE 359 +L + + Sbjct: 370 ALLWRAD 376 >gi|254428344|ref|ZP_05042051.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] gi|196194513|gb|EDX89472.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] Length = 353 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 121/357 (33%), Gaps = 11/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RYF++ + TL L + L + + NY + T P Sbjct: 3 LLKRYFWRAVMIPTLAILFIIVGLDCLFGFVYELEFL--RGNYQVMEALQFILTTTPRRF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P L+ ++ L + EL + RA G+S ++ + ++L I ++ + + Sbjct: 61 YEYMPMAILLGTLIGLGLLANSGELSVIRAAGVSTLKVSWLVLRPVLVLIILSIPLGEYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E++ + G+ +S W + I + N + T Sbjct: 121 TPYSEQVAQSNRSMAEGGGEALRSKYGYWHREGPEFIHI-----NAVQPNGVLHGLTRYR 175 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKV---VEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K+ + D AI D L+ + + K+ + Sbjct: 176 FSDNQKLTETQYVDRAIYQGDFWSLEGIHGTRLFDDHAETYQKDQGEWQTELTPQLLSIV 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 Q + + ++++ + + F+ + +PL + M LIA S R Sbjct: 236 VLQPDNLALVKLLEYTRYLKRQG-LETADYMLSFWQKLFMPLATIGMVLIAISFVFGPLR 294 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + GI +G + + P+ AA++P L + L + +L + Sbjct: 295 EVTMGLRLTAGIVAGLIFHYGQQFFGQLSLVFHTDPLLAAMLPPSLCLVLGVWLLQR 351 >gi|326796830|ref|YP_004314650.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] gi|326547594|gb|ADZ92814.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] Length = 353 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 134/357 (37%), Gaps = 11/357 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY L + + + L F + + ++ + +Y+ + + A R P+ Sbjct: 4 FDRYIGSSVLWSFAAVIFVLLGLDFALTFIDQVKKVND--SYTTNALLQVLAYRAPIKFA 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + IP +L+ ++ L TSEL + RA G+ IW++ +L+ + V + ++ Sbjct: 62 EYIPVASLIGTLIGLGALASTSELTVIRATGVPIWRIGFAACKPILLISLIGVGISEYVS 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + W++ I + D T Sbjct: 122 PYATQQADLIERLRGQSEGRFALTGGVWIKSDGNFVYI-----NAADREGVLYDIQIFTP 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQKFS 241 + + +K + +++ +L++V E + I+ K + +K S Sbjct: 177 NGQALEKIQKAKFARHLSDNQWRLEQVTETHFLGDRIETGYKETVPWTASLKPSHLFLAS 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ + S E+ + S+ + + +F+ ++P A+ ++A S RS Sbjct: 237 QEPEALSLSELHQYQSYLTGQ-ELNAGLYQLEFWTKSLMPFACFALVIVALSSVFGPLRS 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + G+ G M + + + P+ IP+ L ++ +L++ +K Sbjct: 296 STMGGRIFSGVLIGIMFQNGLNLFGKMSLALSFSPLIGVAIPIALCFAIGLLLMSRK 352 >gi|299065987|emb|CBJ37168.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CMR15] Length = 401 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 51/402 (12%), Positives = 112/402 (27%), Gaps = 46/402 (11%) Query: 1 MPGIL-----WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLA 55 M +L +YF + ++ L + L D+ + Y+ Sbjct: 1 MMKLLKMQVYEKYFARQIYGVFVFILFAVLALFVFFDMLSELGSVVGR--YTTLIAFFHV 58 Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 + P + ++IP L+ I VF + SE I R G+ + L ++ L + Sbjct: 59 MLQAPTRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALV 118 Query: 116 TVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAK 167 T + I E+ + + W++ P + F+ Sbjct: 119 TYIFGEFIGPKSEQFAQKVRLEALGATVSSGFRSGVWVKDRGPARPDGSGGEVTRFVNVG 178 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------------- 214 + P+ I R + +L V E Sbjct: 179 TLQPDQTIQGLRIYEFDTDYRLSSIRVAQQARYQGHQHWELNDVTETRFIEFPRHAGGAT 238 Query: 215 -----------------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + + + ++ + + Sbjct: 239 PQDSKQAVPGAPDALAPDFRGEQTRLPKQDMRSELTPQILSVLMVTPDRMATLDLFQYIR 298 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 N R E + +V P ++ M ++ + +R+ + V GI G Sbjct: 299 HLRD-NKQDTQRYEIALWKKVVYPFTVLVMMALSLPFAYLHARAGAVGLKVFGGIMLGLS 357 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + G + A++P L ++++++ L E Sbjct: 358 FQLVNNLFSHVGLLNTWPAIFTAILPGALYLAVALVALRWVE 399 >gi|222054621|ref|YP_002536983.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] gi|221563910|gb|ACM19882.1| permease YjgP/YjgQ family protein [Geobacter sp. FRC-32] Length = 389 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 121/362 (33%), Gaps = 6/362 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+RY FK + ++ + L + + + + + +P Sbjct: 1 MNSTLYRYIFKEIPPPFFLGVATFTFVLLMGRLLRLTDMVVTK-GVPLGDVLRMILYLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IP L+ ++ F L+ SE++ +A GIS++ LL P +++ + + Sbjct: 60 SFLLVTIPMAFLLAILLAFGRLSGDSEIIAMKASGISLYGLLPPVFSLAVITYLAGAFIT 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 G DL+ +N + G + Sbjct: 120 IYAVPKGNSAFKDLLVTVVENRVSLGVKEKVFNGDFPGIVIYCDGYDERTQVMSGIIIQD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLK----KVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + I+ A + V+L + + ++ I + Sbjct: 180 ERDPLEPSTIMAGHGTINADHASRSVRLHLASGSIHRTAGREGYRLVQFSDYDLHINLSQ 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + ++ ++ SN + +++ +P + TL+ + + Sbjct: 240 ASQAVKRDERDMSLAELRTNWNSNHFDNKGRLEMRLEYHRRFSLPFACLIFTLVGMPLGI 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + RS + A IF + Y I++ K+ G+ +L P AA +P +L ++ I + Sbjct: 300 QNQRSGK-AAGFAISIFLLLLYYIILSACKTLGEKELLNPFLAAWVPNMLFVAFGIYLFR 358 Query: 357 QK 358 + Sbjct: 359 KT 360 >gi|260062387|ref|YP_003195467.1| hypothetical protein RB2501_12362 [Robiginitalea biformata HTCC2501] gi|88783950|gb|EAR15121.1| hypothetical protein RB2501_12362 [Robiginitalea biformata HTCC2501] Length = 360 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 128/360 (35%), Gaps = 10/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+ RY K YL T LL + + +++L E +M + + + Sbjct: 1 MLTIIDRYILKKYLSTFGLMLLLFVPIGIMLNLAEQIGKMID-NEAPLVEILIYYGNFTI 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + P + I + +E+V + G+S + L P+ +G+ ++ + L+ Sbjct: 60 YIGSLLFPIFLFLSIIFFTSKMANNTEIVAILSSGVSFGRFLRPYWIGASIIAVLMFLMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I S K + ++ G K + + Q+ +I P I +FT Sbjct: 120 MFIVPSASKGFNEFKFKYLKKGSKDRVTSNIFNQLGESD---YIYVSSFDPARQIGYNFT 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-----YGRIPIDKNSTTLNIPIKMD 235 + ++ ++ + + + + I + ++D Sbjct: 177 YEHFGEDGELEYKISSANIRWLEEDSLYRLTSYTRRNLRGDTEIVETRRRLDTLFAFQID 236 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 S +++ +E+ + ++ + + Y +P+ +T+I +VS Sbjct: 237 DLTPVSYIAETKNLFELNQFIADQRRKGASNVNTYVMVKYKRWALPVTAFVLTIIGVAVS 296 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + +A+GI F+ + + + + P+ A IP I + L +L Sbjct: 297 -SIKRRGGMGVNLAFGIGVAFIYIFMDKVFGTLAEQSGFPPLLAVGIPNIFFLVLGYFML 355 >gi|313203772|ref|YP_004042429.1| permease yjgp/yjgq family protein [Paludibacter propionicigenes WB4] gi|312443088|gb|ADQ79444.1| permease YjgP/YjgQ family protein [Paludibacter propionicigenes WB4] Length = 367 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 112/352 (31%), Gaps = 2/352 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K +L T + ++ + + V D+ E + + +P Sbjct: 12 KRIDTYIIKKFLGTYFFSIVLILSISVVFDITEKLDNFVSHNAPLKAIVLDYYLNFIPFY 71 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + P T + I + +E++ + G+S +L+ P+++ + ++ + + Sbjct: 72 MNMFSPLFTFIAVIFFTSKMATNTEIIAILSSGVSFRRLMLPYMISAAVIATISFTLGGF 131 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G K +D ++ + + + I + Sbjct: 132 VIPHGTKKMLDFEDKYVRQIKQSNATNLQMEVAKGVIMYIGRFEVSNNTGYQFSLEKFEG 191 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D + L++ S I ++ + F + Sbjct: 192 KTLASRLTAETITWDSLYSWKISNYLQR-DFNGMREQITKGISKDTTIMVQPEEFYITAA 250 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + S ++ + + + + E +Y +PL MTLI S+S R Sbjct: 251 EAPQMSIVKLGSYLKRQRERGVGNIKLFEDDYYKRFSMPLAAFIMTLIGVSLSSRKVR-G 309 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ + + SF +G + AA IP ++ + + I + Sbjct: 310 GMGLHLGVGLALSAIYILFSAMSTSFSVNGSMSAFAAVWIPNVVFLLVGIYL 361 >gi|220916597|ref|YP_002491901.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954451|gb|ACL64835.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 360 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 123/360 (34%), Gaps = 9/360 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL+RY + L L L G + + +D + + L A + ++ Sbjct: 2 ILFRYVARRMLGAFLVALTGVVGIYLAVDFVDNASAYTGAGWLPA--VLQLYAYKAAGVV 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P ++ + +T E RA+G+ W+L P + ++L G V++ + + Sbjct: 60 YMVAPAALILGAGIATSMFRQTREYTAMRAVGLGPWRLAVPVLAVTLLAGGVLVVLNDLV 119 Query: 124 ATSGEKIGIDLIQQW--KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + ++ + + + + +E T Sbjct: 120 GVQAAERAEEITAHRFARGGNLRRFLAAREPKRWFRGMDGKRVYHLRGNLPDGGFERVTV 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP----IDKNSTTLNIPIKMDGF 237 + + + R DA L+ V + + + + D F Sbjct: 180 YELGEGFTLARRIDAARMHPDGRAWILEDVEDRTFRQDGSMGLERADRKRYAFDEPPDAF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + +I+++ + + + Y + PL + L+A +++L Sbjct: 240 AVIAGKPDQMRWNTLIRQIGIRKRLGQP-VTEFQLERYDRLAYPLAGIPGALLALALALR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + + + + + + G SG + P A+ P ++ ++L + + + Sbjct: 299 RDRKGHLAAALLEAVGVTLLFWGMQGVSSALGLSGRVAPWIASWAPNVVFLALGAIAVHR 358 >gi|85859086|ref|YP_461288.1| permease [Syntrophus aciditrophicus SB] gi|85722177|gb|ABC77120.1| permease [Syntrophus aciditrophicus SB] Length = 394 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 104/362 (28%), Gaps = 10/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K L+ L ++ + + ++ + M +S A L +P Sbjct: 1 MKIINRYLVKEILQPFGIVLFVLTFVLLMGKILQLMDLMINK-GVGLSHIARLILFLLPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P LV ++ L+ +EL + +A GIS+++L P ++ +++ + T Sbjct: 60 FLVFTLPISLLVSVLIALGRLSSDNELTVLKASGISLYRLTPPILMIALVSFMLTAATTL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDF 179 + LI N + N + D Sbjct: 120 FLVPYSNTATKALIFNVARNKASIGIKEKVFNADFNGVVLYAEKVPSDGRFMEGVLVSDQ 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + ++L+ Y Q Sbjct: 180 RTADEPGTIIAKKAFLVADPKSMTVTLRLEDGSTYFVAENMKIFRKMDFKTYDINLDLQS 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFH-------NYRAETQFYFLIVIPLMLVAMTLIAA 292 S + + N+ + + Y IPL + +++A Sbjct: 240 SSSDAEKMRTKALKEMTPRELIQNLKSGRLDDKIYRKTAMELYEKFSIPLSCLVFSILAI 299 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + ++ + G+ + + Y + + G L P + IP IL Sbjct: 300 PLGVKPHHRSVKSRGFTIGLMTVLLYYLLQLGCEGMVTVGRLSPFLGSWIPNILFTIAGT 359 Query: 353 LI 354 ++ Sbjct: 360 VL 361 >gi|85374866|ref|YP_458928.1| permease [Erythrobacter litoralis HTCC2594] gi|84787949|gb|ABC64131.1| predicted permease [Erythrobacter litoralis HTCC2594] Length = 365 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 126/358 (35%), Gaps = 3/358 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y K ++ L L+ ++++ ++DL ++ + A RVP ++ Sbjct: 10 TLTLYLAKLFIVRILAVLVMLVLVLMMLDLLSTSGEILAVEGNGQGELLTYAGLRVPQLV 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+ +P+ L+ I+ LN+ SE++ +A G+S Q+L P ++ + L+ + + + Sbjct: 70 QRFLPYSVLLATIITLIALNQNSEVIAMKAAGLSAHQVLAPLLLTAGLVALVSFGFNERV 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 T + I++ + + D T Sbjct: 130 VTRATATLKAWEATEFGAVPPDSDVKAN-VYITDGTNILTARTVAGTGADIRLGDVTWYR 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR-IPIDKNSTTLNIPIKMDGFQKFSE 242 +I + A A + +L+ + + + + + + Sbjct: 189 RAPTGQIAEQVRAVSASFVDPGWQLENPQSFDITTANTTTSEAMVVGEGLTPAQIELEAI 248 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F+ + + +++ + PL M L+ A + +RS Sbjct: 249 DPDAVPFWRLGSAIDSYEAIGRR-TAELRAKWWHKLSGPLSAFLMPLLGAVAAFGLARSG 307 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 Q I G+ GF + + + G G P AA P +L + + +L++ E+ Sbjct: 308 QLFIRAVIGMGLGFAYFVVDNAALAMGSFGGYPPFLAAWAPFLLFLLVGETVLIRTEE 365 >gi|284037837|ref|YP_003387767.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] gi|283817130|gb|ADB38968.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] Length = 358 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 118/353 (33%), Gaps = 1/353 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y K +L+T ++ ++ +++V +ID E + + +P Sbjct: 1 MKLLDAYILKRFLQTYIFVVMVIVLVVVMIDYTEKVDNFHKTHAPGNEILFNYYLNFIPY 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P + + + + L +E++ + G+S +LL P+V+G+ +L + T ++N Sbjct: 61 WANYISPLMVFIATVFLTSRLAARTEIIAILSSGVSFVRLLLPYVLGATVLAVATYFMVN 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K I ++ ++ + N + + + Sbjct: 121 YVIPKANKTRIAFEIKYINDAYNFSGRNVHLKIAPNTYAYLESYNNQSNTGYKFTMERVE 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K+ + D K + +K D F Sbjct: 181 GNQLKQKLSADHIEWDAKKKKWTVFDYKIRTINGPQETLTPGAKIDTTLNLKPDDFSSDF 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + E+ + + Y P ++ +T+I +S SR Sbjct: 241 NLYETLTRPELNDHIELLQSRGADGVETYLLEKYSRDTRPFAIIILTVIGVIMSARKSRR 300 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 VA G F F + K +SG L P+ A +P + ++ +L+ Sbjct: 301 G-VGWQVALGFFLAFTYLLFFMLAKGIAESGNLNPIVAVWLPNAIFAAIGVLL 352 >gi|254468723|ref|ZP_05082129.1| permease YjgP/YjgQ [beta proteobacterium KB13] gi|207087533|gb|EDZ64816.1| permease YjgP/YjgQ [beta proteobacterium KB13] Length = 355 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 72/358 (20%), Positives = 135/358 (37%), Gaps = 10/358 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y + +G + L D + + Y +S+ V +P + Sbjct: 3 LAKYINFEFFINISLVAIGLVFLFAFFDFLQEIGNL-NSGKYDLSKIIVFITLSMPGHLY 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +IIP L+ + L+ SELV+ R G+SI Q+ + ++ S+ G+ T +V N I Sbjct: 62 EIIPLSCLIGAMFTVGQLSGNSELVVMRTSGMSILQIASSLIIVSLFFGVLTFMVGNLIT 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 EK + D WM+ N +I + + + Sbjct: 122 PVSEKNAQQIKISSTDGSVTTDFKSGVWMKDGNNFVNIEN-----VLPDASLRNIHIYEF 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQKFS 241 D + DA+ N +L+K+ + D + T IK + Sbjct: 177 DNDFSLRSIVDAEKGRYENGIWELEKIKQSFILDEGFDVKTLPSGTWKSMIKPEMMNVLL 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S +++ +++ K+N R E F+ I+ P+M + M L A RS Sbjct: 237 ISPDRMSIFDLNDFINYLKKNNQK-TSRYEVSFWEKIIQPVMPIIMILFAVPFGFFQERS 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + GI G + + ++M+ G P+ A+IP I+ + ++I ++ E Sbjct: 296 GGKYLKMFLGIIFGIIYQIMNSMMRHIGVLNDWEPIITAIIPSIVILGIAIYLMFYFE 353 >gi|78184805|ref|YP_377240.1| permease [Synechococcus sp. CC9902] gi|78169099|gb|ABB26196.1| possible permease [Synechococcus sp. CC9902] Length = 384 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/370 (13%), Positives = 106/370 (28%), Gaps = 17/370 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ L+ + +L I + + + I L +P + Sbjct: 14 LLDRWLLAEIAAPLLFAVAAFTVLGLSIGVMFELAR-RLVDGLPILVALQLLLLNIPSFL 72 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P TL ++ + L+ SEL R++G+S +L+ P + SILL T + + I Sbjct: 73 VLSLPMATLFATLLAYSKLSSNSELTALRSLGVSTIRLVVPALALSILLTGLTFVFNDVI 132 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD----------IFIGAKKILPEN 173 +Q+ + D + + Sbjct: 133 VPRANTQAEITLQRGLGRALATERGKDITFNSFGKIYDPKTQTSSTGLRQLFYARRYEGG 192 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLN 229 + + + + + + + + Sbjct: 193 EMLDVTLLDFSRADYRQMWIAERAVYNESKAMWEFFNGQVLTLNPNGSTTRLAFDENFYP 252 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 + + + + + I + + R + P+ + Sbjct: 253 LSSGPLQVAELPDDANDMTLSQAISAEKVESNAGNIKAARKLRVRIQEKFSFPMACIVFG 312 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI +S+ I Y + S G SGIL P AA +PV++++ Sbjct: 313 LIGSSLGARPGSRTSRSQGFGVSILLILGYYALSVSFSSLGVSGILPPFLAAWLPVLISL 372 Query: 349 SLSILILLQK 358 +LL++ Sbjct: 373 GAG-GLLLRQ 381 >gi|119357818|ref|YP_912462.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] gi|119355167|gb|ABL66038.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] Length = 358 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 130/357 (36%), Gaps = 8/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY F+ + + + + L +I + E ++ +L + + +P Sbjct: 1 MKLLDRYIFRQFAVSFFFASAAFIALFILISMVENLDEFIDL-GIGPGKITGYYLSSIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L+ I+V L+ SEL ++ GIS+ QLL PFV+G ++ +L Sbjct: 60 TLMVTSPVAALLSAILVAGKLSAMSELSAIKSAGISLKQLLKPFVLGGTIICSINMLNSC 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + Q M I I + ++ ++ Sbjct: 120 WLGPA--AAADKIAFERTSFNRTQNLQANSNMHILESGNRIVSIGELLINQSKGLHISIE 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMDGF 237 + + K LK+ + + + TL + + + Sbjct: 178 QFNGTRLSTRMDAPEMIFDQNVHKWVLKETSSRSFTGNNEQYHLNPGNDTLGMAMSLKSL 237 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 +K + Q + E + +K+ RA+ + + I +P + LI +S Sbjct: 238 RKLNVQPDEMNILEHYRYTREKDKAGFSGLDRAKVKLHAKIALPFASLISILIGVPLSTI 297 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + +F GF+ + + + G +G+L P AA +P +L + ++ ++ Sbjct: 298 RKR-GGKAAEFSITLFIGFLYLGLQKTIATIGYTGLLEPWIAAWLPNMLFLIVAGIL 353 >gi|298372644|ref|ZP_06982634.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275548|gb|EFI17099.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 389 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 124/357 (34%), Gaps = 8/357 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + YL T ++ + + V D E + E + +P Sbjct: 35 ILDRYIMRKYLSTFFMCIIMIISISVVFDYAEKVDDFSENNAPMRAIIFDYYFNFIPYFA 94 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P + I + +E++ + G+S +LL P+ + + L+G+ + L+ + Sbjct: 95 NLFTPLFAFISVIFFTSKMAYNTEIIAMLSTGMSFKRLLVPYFMSATLIGLMSFLLGGFV 154 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + K +D ++ + I + + ++ + +F+ Sbjct: 155 IPASNKPRLDFEDKYYRKFRSELVTNI----QLELEPGVVAYFERYEENINRGYNFSLEK 210 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKF 240 + K + + + L V+ + + + I + F Sbjct: 211 FEGKKLVSRLTAEYIDMDSLYHWHLVNYVKRDFKGMREIMTMGDGLDSVIKMDPQDFFIT 270 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 E + ++ + + + I + E ++ +P + +TLI S++ R Sbjct: 271 GEDAPQMTNTKLYQYLRRQKERGIPGAQKFENEYNNRFAMPFAALILTLIGVSLASRKVR 330 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + +GI + T+ F +G + + A +P I+ ++ I++ + Sbjct: 331 -GGTGLHLGFGIALSAIYILFCTVSSMFAINGTMPSLLAIWLPNIIFTTIGIILYAR 386 >gi|126175309|ref|YP_001051458.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217972440|ref|YP_002357191.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] gi|125998514|gb|ABN62589.1| permease YjgP/YjgQ family protein [Shewanella baltica OS155] gi|217497575|gb|ACK45768.1| permease YjgP/YjgQ family protein [Shewanella baltica OS223] Length = 370 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 117/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+++Y + LK + LL + + I + ++ S L +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASD-GDFPASLIMTLIGLNLPYLV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+V+ +G+S W + ++ +++ +FT + + Sbjct: 61 ILVLPLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 A E+ ++++ + + N + +F+ D Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + ++ L V YQ D Q Sbjct: 181 PDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + + F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALPVDELVKIEGAEAVAE-------FHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + + ++ + + GI+ I + + + +L Sbjct: 294 VRQGKFAK-MFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFLL 349 >gi|119503286|ref|ZP_01625370.1| hypothetical protein MGP2080_11498 [marine gamma proteobacterium HTCC2080] gi|119460932|gb|EAW42023.1| hypothetical protein MGP2080_11498 [marine gamma proteobacterium HTCC2080] Length = 353 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 116/359 (32%), Gaps = 11/359 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G RY L T+ L + L + + + + + P+Y + + A +P Sbjct: 1 MGRFDRYLAGNVLGATVGVLAVLVGLDALSSVIDELDDLS--PDYGFTDALIYVAFTLPR 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + +PF L+ +V L TSEL + RA G S+ QL + ++LL + LV Sbjct: 59 RLHEYVPFAALIGALVGLGRLAATSELTVVRAAGRSLPQLALGTLRPALLLAVLGFLVGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ E+ + + + W + + + I Sbjct: 119 FVSPVAEQFAVSHKALAQGSQSSFTGRGGVWNRDGD-----TFIHVSAVERGGIIHGVQL 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 +T D++ ++ A+ + L+KV + + + + Sbjct: 174 LTFDEERRLTRSLRAERGTYQGGQWLLEKVSRTELTQDRAVTDALIQQVWETEVTPQLLA 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ + K E F+ ++ P + + L+A S Sbjct: 234 LEAVALDSLPTLELWPYAQYLRKQG-LMYRDVELAFWRKVLQPFAVAGLVLVAMSFIFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ G + L + AA P+ + +L + Sbjct: 293 LREGSLGARIFTGVIIGVVFRISQDFFGPASLIFGLPAILAAAAPIGVCWIAGGWLLTR 351 >gi|304410148|ref|ZP_07391767.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|307302141|ref|ZP_07581899.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] gi|304351557|gb|EFM15956.1| permease YjgP/YjgQ family protein [Shewanella baltica OS183] gi|306914179|gb|EFN44600.1| permease YjgP/YjgQ family protein [Shewanella baltica BA175] Length = 370 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 117/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+++Y + LK + LL + + I + ++ S L +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASD-GDFPASLIMTLIGLNLPYLV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +G+S W + ++ +++ +FT + + Sbjct: 61 ILVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 A E+ ++++ + + N + +F+ D Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + ++ L V YQ D Q Sbjct: 181 PDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + + F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALPVDELVKIEGAEAVAE-------FHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + + ++ + + GI+ I + + + +L Sbjct: 294 VRQGKFAK-MFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFLL 349 >gi|16330198|ref|NP_440926.1| hypothetical protein slr0882 [Synechocystis sp. PCC 6803] gi|1652686|dbj|BAA17606.1| slr0882 [Synechocystis sp. PCC 6803] Length = 394 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 115/368 (31%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY F ++ + L I + + + ++P + Sbjct: 22 VMDRYLFVELFLPFIFGMGMFTSLALSIGTLFDLVRRVTESGLPMDIAVKILFLKMPEFV 81 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ +++ + L+ SEL+ R+IG+SI++L+ P ++ I++ + + I Sbjct: 82 VLAFPMSMLLASLMAYSRLSSDSELIALRSIGVSIYRLVVPALLFGIVVTGIAFVFNDRI 141 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + + K IL E+F Sbjct: 142 TPAASYEALATLDRAIHQDRPPRQEQNIIYPEYGMVRQPDGNEKNILKRLFYAEEFNGSE 201 Query: 184 IDKKNKIIHRK---------DADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLN 229 + + + + I + Y R + L Sbjct: 202 MKGLTILDRTQSGVNQVLTAERASWNISENTWDFYDGTVYLIAPDGSYRNIVRFRHQQLA 261 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 +P + + + + + S R E + +P + Sbjct: 262 LPRAPLDLASQERKDGEMTIAQSRRYLEVLRLSGDDKKVRKLEVRIQKKYALPFVCFVFG 321 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI A++ + + + F Y + + +S G G L P AA +P L + Sbjct: 322 LIGAAIGVRPQ-NTNKATSFGICVGLIFFYYLLSFLSESMGIWGALDPFTAAWLPNFLGL 380 Query: 349 SLSILILL 356 ++L+ Sbjct: 381 IAGTILLV 388 >gi|326388615|ref|ZP_08210208.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] gi|326206866|gb|EGD57690.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] Length = 356 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 120/355 (33%), Gaps = 4/355 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + + + LL ++++ ++DL + R P ++ + + Sbjct: 4 YIARLFAVRIVAVLLMLVLVLQMLDLLSESGHILAAKGNGQMELLRYGMLRTPQLVSRFL 63 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P+ L+ I+ LN+ SE++ +A G+S Q+L P + S +FT + Sbjct: 64 PYSVLLATIITLMTLNQNSEVIAMKAAGLSAHQVLAPLFLVSAAASVFTFTFNERVVVRS 123 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 Q SD+ + + + +F + + D Sbjct: 124 TATLKAW-QDVDYGAVPTDSDVKSNVWLQDGPNIVFAKTISGRGTATRMSEVSWYRRDPT 182 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK--NSTTLNIPIKMDGFQKFSEQFA 245 + A LA + + + + ++ Sbjct: 183 GVVTEIVHAPLATYTHPGWRFDHPTSFDVQSAALTTLPGPKVYASGVEPTQIIIRKTDAD 242 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 S ++ + ++ + + + +++ I PL V M L+ + + +RS + Sbjct: 243 RESITQLSQSIAEIQAAG-YRTNELDGKWWHKISGPLSAVLMPLLGSVAAFGLARSGKLF 301 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G+ GF + + + G G P AA P +L + + +L++ E+ Sbjct: 302 VRAVIGMALGFAYFVVDNAALAMGNFGGYSPFLAAWSPFLLFLLIGETVLIRTEE 356 >gi|33151746|ref|NP_873099.1| hypothetical protein HD0552 [Haemophilus ducreyi 35000HP] gi|33147967|gb|AAP95488.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 360 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 131/360 (36%), Gaps = 6/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + LL + LVF+I L E +GE NY A +P Sbjct: 6 MNILERYIGKTIIMMMFAVLLMSSGLVFIIKLVEEFKNVGE-GNYDALTATYYALLMLPS 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I++ +P + L+ ++ NL SELV+ ++ G S +++ + +I + I T+ Sbjct: 65 DIKEFVPVVLLIGGLLGLSNLASHSELVVMQSTGFSRFRIGLAVMKTAIPIIILTMSASE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I E+ ++ + G ++ W + N I + N Sbjct: 125 WIIPKVEQFARNMRSVAQSGGSMLSTNGGFWAKDGNNFLYIRHIENEHQLNN---ISIYH 181 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + A L+ +G + + I S Sbjct: 182 FENKVLTSVSQADSALFNGKDWTLQNLQTATITDHGIQTTHQANQNWQTTITPSKLGIVS 241 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S S + +SF ++ + R + F+ + P+ + M L+A S RS Sbjct: 242 LKPESLSIAGLADYVSFLTETGQ-DSKRFQIAFWRKVYQPISMAVMMLLAISFIFGPLRS 300 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILILLQKED 360 + + GI +GF+ Y + + L ALIP ++ +++ +L +K D Sbjct: 301 SAMGTKLFIGIIAGFIFYVSNIVFGNMTLVFSWLPIAIGALIPSLICLAIVWWLLTKKRD 360 >gi|295690098|ref|YP_003593791.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295432001|gb|ADG11173.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 353 Score = 120 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 130/358 (36%), Gaps = 11/358 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y + L L M ++ ++DL ++ + + ++ A AA R+P + + Sbjct: 3 LQLYVLRTVATRILGAALILMSILQILDLLDVTTDILDR-GLGMAGVAYYAALRLPRLFE 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q+ P L + F L R S +V RA GIS ++++ + I + + L +A Sbjct: 62 QVAPIAVLAGGLFAFSQLARESAVVAMRASGISGYRIVGMAMPAVIAVMLLDALCGQVLA 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + D + +++ + S+ + T Sbjct: 122 PRSDPTLADWWRNTTPVAERKAPSPRTFRAGSDLVIGAD-----ASADGREITSLTIFRR 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQKFS 241 + K ++ + +A A+ + L+ ++ + S ++ Q Sbjct: 177 NAKGILVEKVEASKALYDGRRWTLQSPKTTRFAGDLAQTSTAASINWPTALRPQDVQGLF 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ + + + + T F P + + M L++A V+L RS Sbjct: 237 GDDSAPTAATARRALENGG--SDRPESFYATHFQSAFASPFVSLVMLLLSAPVALANFRS 294 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 Q +++ G+ +G + ++ + G+SG L P+ A + +L+ L E Sbjct: 295 GQGAVLLTAGLGAGLLFLVANGMLTALGESGALSPLLAVWAAPAIFGALAARTFLALE 352 >gi|319954060|ref|YP_004165327.1| permease yjgp/yjgq family protein [Cellulophaga algicola DSM 14237] gi|319422720|gb|ADV49829.1| permease YjgP/YjgQ family protein [Cellulophaga algicola DSM 14237] Length = 359 Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 131/354 (37%), Gaps = 4/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y K YL T LL + + ++ L+E N+M + ++ + I Sbjct: 3 ILDKYILKRYLVTFSVMLLLFIPIGIMVHLSEQYNKMQD-NEAPLNEILMYLGNFSIYIG 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + I L +E+V + GIS + L P+++G++++ F +L+ I Sbjct: 62 SMLLPIFLFLSVIFFTSKLAGNTEIVAMLSSGISYGRFLRPYLMGAVIVAAFMLLMGMFI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + K + ++ G + + + Q++ + + Sbjct: 122 VPNASKGFNEFKFKYLKKGKQDRVTENIFNQLNANDFIYVSRFDPTRDIGYNFSMEHFNK 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI--PIKMDGFQKFS 241 + + + + V G I + L+ P K++ S Sbjct: 182 DNVLEYKLSAANIRWIEADSIYRLTSYVKRTLKGDTEILETKRRLDTVFPFKINDLTPVS 241 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +++ +E+ + ++ + + Y +P+ +TLIA +VS R Sbjct: 242 YVAETKNLFELNEFIANEKRKGASNINTYILVKYKRWTMPITAFILTLIAVAVS-SQKRR 300 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +A+GI F+ + + + P+ A ++P +L L+ +L Sbjct: 301 GGMGVNLAFGILVAFVYIFFDRVFGTLAEQSGFSPLLAVIVPNVLFGFLAFYLL 354 >gi|119773933|ref|YP_926673.1| hypothetical protein Sama_0796 [Shewanella amazonensis SB2B] gi|119766433|gb|ABL99003.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 369 Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 117/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY FK K + LL + + + + + S L +P + Sbjct: 2 IVFRYLFKEVFKAQIAVLLVLLTVFISQHFVRVLADASD-GEFPASLVVTLLGLNLPYLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+V+ +G+S W + ++ ++L +FT + + Sbjct: 61 VLVLPLSLFLGILMAHGRMYAENEMVVFHGVGVSEWYVTRVTLLLAVLNMLFTGYLSLFV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 E+ ++++ + + + + +F+ E D Sbjct: 121 TPWAEERQNQVLEKAQSEAGLAALVQGRFQTSPDGRAVLFVEKIGKDNELEKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 ++KL V YQ +D Q Sbjct: 181 PDDEHGQINLVSAAGGKVVEDASGAQQLKLNDGVRYQGSPKSLDYQVLEFGGYGMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + + A + ++ I IPL + MTLIA ++ Sbjct: 241 EVDERRRKMSALPLNQLLD-------QNTPEAVAELHWRIAIPLAIPLMTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + ++ I + ++ + + ++ + + + I++L Sbjct: 294 VRQGKFAKMLP-AILLYLGYFGLMVAGRKALEDEVVPAFMGMWWIHLSALVMGIMLL 349 >gi|167622903|ref|YP_001673197.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] gi|167352925|gb|ABZ75538.1| permease YjgP/YjgQ family protein [Shewanella halifaxensis HAW-EB4] Length = 371 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 121/357 (33%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + K + LL + + + + + S L +P + Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASD-GEFPASLVMTLLGLNMPFLT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +GIS W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRVTLLLAVMNMVFTAFLSIYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 A E+ +++ + + N + +F+ + + Sbjct: 121 APWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPE 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + +++L+ V+YQ +D Q Sbjct: 181 PDDETGVANVVVARTGKVLEDETGGQRLQLEDGVQYQGSPKRVDYQVVEFGGYQMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S I + M A +F++ + IPL + MTLIA ++ Sbjct: 241 EVGERRRKLSAMPIGELMDI-------DTPEASAEFHWRLAIPLAIPLMTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +R + + I + ++ + + G++ +++ IL+L Sbjct: 294 NRQGKFAK-MFPAILLYLGYFGLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILLL 349 >gi|160876367|ref|YP_001555683.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|160861889|gb|ABX50423.1| permease YjgP/YjgQ family protein [Shewanella baltica OS195] gi|315268557|gb|ADT95410.1| permease YjgP/YjgQ family protein [Shewanella baltica OS678] Length = 370 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 117/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+++Y + LK + LL + + I + ++ S L +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASD-GDFPASLIMTLIGLNLPYLV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +G+S W + ++ +++ +FT + + Sbjct: 61 ILVLPLSLFLGILLAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 A E+ ++++ + + N + +F+ D Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + ++ L V YQ D Q Sbjct: 181 PDDETGVTNVVVAKGGRVQEDSSGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + + F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALPVDELVKVEGAEAVAE-------FHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + + ++ + + GI+ I + + + +L Sbjct: 294 VRQGKFAK-MFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHISALLMGLFLL 349 >gi|159030859|emb|CAO88538.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 387 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 113/361 (31%), Gaps = 17/361 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY L L+ + L I N ++ + +VP + Sbjct: 16 LIDRYLISQLLPPFLFSVGLFASLGVAISNLSDLANQVVDANLPLASALEILLLKVPEFV 75 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P L+ ++ + L+ SE V ++ G+++++L P S+++ + T L+ + Sbjct: 76 TYSLPVSLLLATLITYGRLSSDSETVALQSCGVTLYRLFIPTFCLSLIVTVVTFLLNEYV 135 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN---------PQQDIFIGAKKILPENH 174 + +++ Q + + + + + + Sbjct: 136 VPNANYRATEILVQKINKEANFWKNKDFYYPDYEIKTLENGTINRNLRSLFYAEQFDGEK 195 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID------KNSTTL 228 + + ++ I D+ ++ + Y+ + + Sbjct: 196 MKTVTVIRWLKEELNQIIIADSARWNAVDNVWDFFNGIIYELTPPNASYSQVIPFKTEKI 255 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAM 287 + F + S + + I+ + S R + + I P + + Sbjct: 256 ALSRSAFDFARQSRDPYEMNIPQAIEYVQLLKLSGDEKRVRFFQVRIQQKIAFPFVCIVF 315 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 I ++ R ++ + F+ Y + ++ S G + L P AA +P Sbjct: 316 ATIGCALGSLPQRISR-GTSFGLSVAIVFLYYLLNFLVGSLGLTATLSPFLAAWLPNFFG 374 Query: 348 I 348 Sbjct: 375 F 375 >gi|261855830|ref|YP_003263113.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] gi|261836299|gb|ACX96066.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] Length = 376 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 120/364 (32%), Gaps = 10/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G L RY + + L +L+ V + ++ +YS P Sbjct: 1 MGTLDRYLIRAIVVGGLASTAAFALLIVVFGAIDELPKV--NASYSAIDALSFVLMTTPG 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P LV ++ NL SEL + R G+S+++L P +VG+ +L + +L+ Sbjct: 59 YLYDFYPAAVLVGGLLSLGNLAAHSELTVMRCSGMSMFRLARPVLVGATILALIGMLMGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I G++ ++ + + +G W++ ++ + Sbjct: 119 TIGAWGQEKANEMRAEAQGSGVSMNLKSGLWLRDGQRFINVGQAIVGGRLNRVRVFTVNA 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM---DGFQ 238 + + ++ ++ + ++ + + + +++ Sbjct: 179 QSQPVQLLSASYAISEGGDLWRLYDVKESTLDTKVPGNSVKVRFVPVQEHVRLFSQKILN 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + ++ + + N + + + P+ ++ M +A Sbjct: 239 IAVLNPRHMNILQLHSYVDYLR-KNQLDASAYSSALWARVFAPVSVLVMLFVALPFVFAP 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL----LPVAAALIPVILTISLSILI 354 RS + I G + T++ I+ +F + +P +A +P L L + Sbjct: 298 QRSGGAGRWLFIAIVLGVVYLTLVQIVSAFAPVYGVGHPFIPFMSAAVPPALFAMLGVYA 357 Query: 355 LLQK 358 + Sbjct: 358 FRRL 361 >gi|241765202|ref|ZP_04763186.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] gi|241365131|gb|EER60003.1| permease YjgP/YjgQ family protein [Acidovorax delafieldii 2AN] Length = 368 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 53/371 (14%), Positives = 123/371 (33%), Gaps = 17/371 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP--NYSISRGAVLAATRV 59 +L R+ + + LG + L F DL + +G Y +S + + + Sbjct: 1 MKVLRRFIHREAFFAVGFVTLGFLALFFFFDLIDELRWVGSTGQNGYQLSHALLFVSLSI 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +++P L+ I V L ++SE I R G+ W+ L + + T + Sbjct: 61 PSHLYELLPITVLIGTIFVMARLAQSSEFTIMRTSGMGPWRALRTLLTLGGFFVLLTFAI 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +A E+ + + G W++ + + + + + + Sbjct: 121 GDYVAPLTERAAQLIKVRHL--GRLTSGATGAWLKERQQDHSFAVNVRALSSDGGMVDVR 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--------TTLNIP 231 +K A L++V + + ++ Sbjct: 179 IFEFDEKGRLASQIHAATGQFGSAGTWDLQQVQRNSFVQKSSEEARVESISAPVWQWPTR 238 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 I D + + ++ + + + R E +F+ + PL + M ++A Sbjct: 239 ISADMVAASLLKPDRMATVDLFQYIRHLEANGQ-SAQRYEIEFWRKVFYPLSCLVMVVLA 297 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 + R+ V G+ +G + + + G P A P ++ LS Sbjct: 298 LPFAYLHFRAGGIAGYVFGGVMAGISFFLLNNVFGYAGNLQNWSPWLTAAAPGLIYSVLS 357 Query: 352 I----LILLQK 358 + ++L++ Sbjct: 358 LAAFGWLVLRR 368 >gi|126658379|ref|ZP_01729528.1| hypothetical protein CY0110_27505 [Cyanothece sp. CCY0110] gi|126620311|gb|EAZ91031.1| hypothetical protein CY0110_27505 [Cyanothece sp. CCY0110] Length = 394 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 122/368 (33%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY F L L+ + L I + +S + ++P + Sbjct: 22 IMDRYLFIELLLPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLMLSVAMRILVLKMPGFV 81 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SE++ R++G+S+++L+ P ++ +++ +V + I Sbjct: 82 SLAFPMAMLLAALMAYSRLSSDSEIIALRSLGVSVYRLIIPVILFGLVVTGCAFIVNDWI 141 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + +Q+ + + Q+ +L E++ Sbjct: 142 APAATHEAALTLQRAVNQERPDFKERNIVYPEYKTIQEEDGQQATVLTRLFYAEEYNGDK 201 Query: 184 IDKKNKIIHRKDADL---------AIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLN 229 + + ++ I ++ Y R + L Sbjct: 202 MKGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQLA 261 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 +P + F + + + + S R + + +P + + Sbjct: 262 LPRAPLDLANRRQNFTEMTIAQTKEYLKAMQLSGDEKRVRKVKVRLQEKYAMPFVCLIFG 321 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 ++ A++ + + + F Y + + S G GIL P A +P IL + Sbjct: 322 VVGAAIGVRPQ-NTNKATSFGVCVGLIFGYYLLAFMSTSLGIWGILTPFLGAWLPNILGL 380 Query: 349 SLSILILL 356 + L+L+ Sbjct: 381 TAGSLLLI 388 >gi|300690718|ref|YP_003751713.1| permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] gi|299077778|emb|CBJ50416.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] Length = 398 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 115/397 (28%), Gaps = 42/397 (10%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP + +YF + ++ L + L D+ + Y+ + P Sbjct: 4 MP-VYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGR--YTTLIAFFHVMLQAP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++IP L+ I VF + SE I R G+ + L ++ L + T + Sbjct: 61 TRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYVFG 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAKKILPE 172 I E+ + + + W++ P + F+ + P+ Sbjct: 121 EFIGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVGSLQPD 180 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------------------ 214 I R + + + +L V E Sbjct: 181 QTIRNLRVYEFDADYRLSSIRVAQQASYQGHQRWELNDVTETRFIEFPRQAGAATPQDSK 240 Query: 215 ------------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS 262 + + + + ++ + + Sbjct: 241 QAVPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPDRMATLDLFQYIRHLRD- 299 Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 N R E + +V P ++ M ++ + +R+ + V GI G + Sbjct: 300 NKQDTQRYEIALWKKVVYPFTVLVMMALSLPFAYLHARAGAVGLKVFGGIMLGLSFQLVN 359 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + G + A++P L ++++++ L E Sbjct: 360 NLFSHVGLLNTWPAIFTAILPGALYLAVALVALRWVE 396 >gi|89900898|ref|YP_523369.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] gi|89345635|gb|ABD69838.1| permease YjgP/YjgQ [Rhodoferax ferrireducens T118] Length = 368 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 127/371 (34%), Gaps = 17/371 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGEL--PNYSISRGAVLAATRV 59 L R + L + LG + L F D E +G Y + A + Sbjct: 1 MKTLRRLIYGEVLYAVAFVTLGFLSLFFFFDFVEEIQAVGRYSEAGYRLVHALTFVALMI 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +++P L+ I V L ++SE I R G+ W+ L ++ + + T + Sbjct: 61 PSHLYELLPIAVLIGTIFVMARLAQSSEFTILRTSGLGPWRALKALLLLGLGFVVLTFAI 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + I+ ++ G L + G W++ + + P+ + Sbjct: 121 GDYISPPADRAGQLLKA--RYQGSITVGQTGAWLKEQQTNAQYAVNVSAMAPDGSMRGVR 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK--------NSTTLNIP 231 ++ + + +D L +V ++ D +S Sbjct: 179 VFEFDNQGFLMSTLQAESAQFGADDAWNLSRVSRTEFPPRDADTARIDRAQLDSFRWPNQ 238 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 I + + S ++ + + +N R E +F+ + PL + M ++A Sbjct: 239 ISAEMVAAALLKPERMSTIDLFQYIQHLR-ANSQVAQRYEIEFWKKVFYPLSCLVMVVLA 297 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 + RS V G+ +G + + + G P A +P ++ + LS Sbjct: 298 LPFAYLHFRSGGIATYVFGGVMAGISFFLLNNVFGYMGNLQNWQPWLTAALPGMIYLVLS 357 Query: 352 I----LILLQK 358 + ++L++ Sbjct: 358 LTAFGWLVLRR 368 >gi|121605071|ref|YP_982400.1| permease [Polaromonas naphthalenivorans CJ2] gi|120594040|gb|ABM37479.1| permease YjgP/YjgQ family protein [Polaromonas naphthalenivorans CJ2] Length = 379 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 126/382 (32%), Gaps = 28/382 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPN-----YSISRGAVLAA 56 + R + L + +G + L F DL + +G+ Y I + A Sbjct: 1 MKTIRRLIYGEVLGSIALVAMGFLALFFFFDLVDELQYLGKNNGAGDSIYQIRHALLYVA 60 Query: 57 TRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFT 116 +P + +++P L+ +I V L ++SE I R G+ W+ L + + Sbjct: 61 LLIPNHLYELLPISVLIGSIFVMSRLAQSSEYTILRTSGLGPWRALKLLLWLGAFFVALS 120 Query: 117 VLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW 176 LV + IA + E+ + + W++ + + ++ P N + Sbjct: 121 FLVGDYIAPASERAAQLMKA--RYQNKITVGQTGAWLKEKQVSSNFIVNVSELSPNNEMH 178 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----------------P 220 + + + A N +L+ ++ Sbjct: 179 GVRIYEFNHQGLIVSTTEAPVAAFSLNTAWQLRNATRTEFDVTTSAGGVNAPAQQAKVKR 238 Query: 221 IDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 D S I + + + ++ + + R E +F+ + Sbjct: 239 TDVASYRWPTEISTEMVSVALLRPDRMATLDLFNYIRHLEANGQTSQ-RYEIEFWKKVFY 297 Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 PL + M ++A + RS V G+ G + + + G P AA Sbjct: 298 PLSCLVMVMLALPFAYLHFRSGSITSYVFAGVMIGISFFLLNNVFGYIGNLRNWQPWLAA 357 Query: 341 LIPVILTISLSI----LILLQK 358 P +L +++S+ ++L++ Sbjct: 358 ATPGLLYMAISMAAFGWLVLRR 379 >gi|157960739|ref|YP_001500773.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] gi|157845739|gb|ABV86238.1| permease YjgP/YjgQ family protein [Shewanella pealeana ATCC 700345] Length = 371 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 123/357 (34%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + K + LL + + + + ++ S L +P + Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLAIFISQHFVRVLADASD-GDFPASLVMTLLGLNMPFLT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +GIS W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILLAHGRMYAENEMVIFHGVGISEWYITRITLLLAVINMVFTAFLSIYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 A E+ +++ + + N + +F+ + D Sbjct: 121 APWAEERQNQVLEHAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + I +++L+ V+YQ +D Q Sbjct: 181 PDDETGVANVVVARTGKVVEDEIGGQRLQLEDGVQYQGNPKRVDYQVVEFGGYQMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 E+ S I + M + A +F++ + IPL + MTLIA ++ Sbjct: 241 AVDERRRKLSAMPIGQLMDI-------DSPEATAEFHWRLAIPLAIPLMTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +R + + I + ++ + + G++ +++ IL+L Sbjct: 294 NRQGKFAK-MFPAILLYLGYFGLMVAGRKSLEDGVIPQYLGMWWIHASALAIGILLL 349 >gi|289678193|ref|ZP_06499083.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 321 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 114/329 (34%), Gaps = 12/329 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y+++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDT--YTLADALSYVMLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + ++L I VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D + ++ A A D +LK V + + +T ++ + Sbjct: 173 RYRFDDQRHMLTSSFAKEAHFKTDYWELKDVATTHFNDGSTEVVNTPVERWDVALSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 RS V G+ GF I ++ Sbjct: 292 PLRSVTLGQRVFTGVVVGFTFRIIQDLLG 320 >gi|221133510|ref|ZP_03559815.1| permease YjgP/YjgQ [Glaciecola sp. HTCC2999] Length = 389 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 109/355 (30%), Gaps = 5/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K K+ M + + + + S A P++ Sbjct: 2 IIFRYLLKETFKSQFAIFFILMAIFITLRFVRVLGDATD-GEIPASLVMGFLALYSPVLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++ SE+ + +A G+S W + ++ +++LG+ T + + Sbjct: 61 SLILPISFFLGIMMAHGRFYVDSEMTVLQACGVSEWYVTRVMLLLAVILGLLTASITMYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L ++ + I ++ N+ Sbjct: 121 APLAVESEYQLREKAGSEAGIAAIIPGRF--QQTGNDAAVIFVHEVESANNQLTKIFLSQ 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 I+ R + + + + G+ + D ++ + Sbjct: 179 INADQPKKVRVIYSQTGTIEVQSDGTQQLILRNGQQYDGSIGQQNYQRVNFDEYRIQIGE 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + + ++ A + + I IPL L + LIA +S R + Sbjct: 239 QKVESMRRKVAALPTLELIGD-NSDEAIAELQWRIAIPLALPFLVLIAVPLSKVNPRQGR 297 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + I + ++ + + G + + + + ++L ++ Sbjct: 298 FGK-LFPAILMYLGYFLLLMAARRALEDGKIPAGLGLWWVHGIILFIGTVLLSRQ 351 >gi|269468373|gb|EEZ80038.1| permease [uncultured SUP05 cluster bacterium] Length = 360 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 121/358 (33%), Gaps = 4/358 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K LK +L ++ + + E +G +Y++ +P Sbjct: 1 MKILDRYIAKTLLKYSLSVMVVLVGIFAFFKFLEEVGDIG-RASYTLFDALAYVGLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ + I L+ I+ L SEL+I R GIS+ ++ + S++ + ++ Sbjct: 60 IVYALSSLIILLGCILGLGYLAGNSELIIMRGAGISVVEITKTTLKVSLVFIVIMIIFGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I+ Q S W++ N + + E + + Sbjct: 120 FISPLFSDYAKKYRAQALGESVISSSQQGFWLRDGNNFIQVDKNIDGRIFEKITLINLNT 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG--FQK 239 + + D + K ++ Q K + D + Sbjct: 180 PSTLDSVVYSDKAVFDGKNMVLQKSNYHQINSDQEFAAIDQKTLQQYLTEVAFDQELIKS 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ S +++ +++ F +N E + Y I+ PL L+AM ++A Sbjct: 240 LKKEPKEFSTWQLFRRVQFL-SNNDLSADIYEVELYQRIMKPLTLIAMIILALPFVFGSL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + G+ + L + +A +P I+ L+I +L + Sbjct: 299 RDSSLGRKIFTGVVISLFFELSSRLGGMISLRFDLNHLLSASLPTIVVFVLAIFMLRR 356 >gi|94500484|ref|ZP_01307015.1| hypothetical protein RED65_15478 [Oceanobacter sp. RED65] gi|94427274|gb|EAT12253.1| hypothetical protein RED65_15478 [Oceanobacter sp. RED65] Length = 354 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 130/361 (36%), Gaps = 13/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I Y + + L L +L VI L + + + ++ + P Sbjct: 1 MRKI-DAYIRSSVINSILAVLFVLGMLDLVIALLNQLDNLRDT--FTFADALYYVVASAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++IP ITL+ +V +L SEL RA G+S +++ + S ++ + ++++ Sbjct: 58 TRLYEMIPMITLIGCLVGLGSLATHSELTAIRAAGVSTGRIMLSTIKASAIMMVLSLVMG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 I E++ ++ W + N + N + Sbjct: 118 EYIVPDLERMTTSFRTIALGREVAVTNEGKGHWHKEGNNYMRF-----AAIEPNGVLHGM 172 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL---NIPIKMDG 236 T D+ + A AI + ++ V + + + ++ + + + Sbjct: 173 TLYEFDENKNLTKMTHAKRAIYQREHWSMENVRITHIEDVRTEYKAKSIAPFDTELTPET 232 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + +++ + + K + + + F+ ++ P+ +A+ L+ S Sbjct: 233 LKFVAQEPKDMAISTLYKYGQYLDAQG-LGGGEFKLAFWKKLLQPISTLALVLVGISFIF 291 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + GI G + ++ ++ G + P+ A LIP+ L + +L Sbjct: 292 GPLRSVTMGQRLFTGILVGLVYKIVVDLLGPIGLLVGIGPLLANLIPIGLCMIWGSWMLR 351 Query: 357 Q 357 + Sbjct: 352 R 352 >gi|284929475|ref|YP_003421997.1| putative permease [cyanobacterium UCYN-A] gi|284809919|gb|ADB95616.1| predicted permease [cyanobacterium UCYN-A] Length = 382 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 108/356 (30%), Gaps = 16/356 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY F L L+ + L I + ++ + ++P + Sbjct: 12 DRYLFLELLSPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLVLTVAFQILLLKIPGFLSL 71 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 P L+ ++ + L+ SE++ R++G+ I++L+ P V+ ++ +V + IA Sbjct: 72 AFPMAILLAALMAYSRLSSDSEIIALRSLGVGIYRLVIPVVIFGFIVTGCAFVVNDWIAP 131 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP---------QQDIFIGAKKILPENHIW 176 + ++++ + + + Sbjct: 132 AATHKAAIILEEAVSQKRPDFKRHNIVYPEYKTVKGKNGQESTMLTRLFHAEEYNGEEMK 191 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLNIP 231 + I ++ I ++ Y R + L +P Sbjct: 192 GLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQLALP 251 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLI 290 + F + E + + S R + + +P + + L+ Sbjct: 252 RAPLDLADRRQNFTEMTISETREYLKAVQFSGNEKRIRKVKVRLQEKYAMPFVCLIFGLV 311 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 AS+ ++ + + F Y + + S G GIL P A +P I+ Sbjct: 312 GASIGVKPQ-NTNRATSFGVCVGLIFGYYILAFMSTSLGIWGILTPFLGAWLPNIV 366 >gi|87302818|ref|ZP_01085629.1| possible permease [Synechococcus sp. WH 5701] gi|87282701|gb|EAQ74659.1| possible permease [Synechococcus sp. WH 5701] Length = 401 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 106/355 (29%), Gaps = 16/355 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 R+ + L+ + + + + + + + R+P + Sbjct: 31 DRWLTNELMGPLLFGVAAFTAVSLSVGVVFELVRRVAESGLPLLTALQVLGLRMPGFLVL 90 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 P TL+ ++ + L+ SEL+ R++G+S W+++ P ++ ++L+ + T + + I Sbjct: 91 SFPMATLMATLLAYSTLSSNSELIALRSVGVSTWRMVLPALIVAVLMSLLTFVFNDLIVP 150 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ-----------QDIFIGAKKILPENH 174 S + + Q + + + + + + Sbjct: 151 SANLEATNTLNQALGKAIAAEKGSNIIYSRFSRRPSKLDESGSERYLSQLFYSRQFKDGE 210 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVE----YQYGRIPIDKNSTTLNI 230 + E I + + + + + Sbjct: 211 MEEVTVLDFSRPSGTQILKAKTGTWNDEAGMWEFRDGQIVLVGDSETTTSAKFDRYLYPL 270 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTL 289 + AS S E ++ + ++ R + P + + L Sbjct: 271 DQGPLKLAALPKDAASMSVSEALRAETLLREAGDQKEARRLRVRIQEKFAFPAICLVFGL 330 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 I +S+ + + + F Y + I S G G L PV AA PV Sbjct: 331 IGSSLGVRPNARTSRSQGFGISVLLIFSYYLMSFIFSSLGVKGTLGPVLAAWSPV 385 >gi|225012841|ref|ZP_03703274.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] gi|225002963|gb|EEG40940.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] Length = 357 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 108/356 (30%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y K Y+ T +L + + ++D+ E ++ E Sbjct: 1 MKLIDLYIIKRYIGTFTVMILLFIPIGIMVDVAEKIDKFKEK-EVPFGAIIDYYIDFTWY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + GIS ++ L PF++ + + IF Sbjct: 60 FANLLFPIFLFLSVIWFTSKLANNTEVIAILSSGISFFRYLRPFLLAATFIAIFAFFAGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I D ++ + + + + N + + + Sbjct: 120 LIVPKSNLGFNDFRYKYIIKKEARNTTKVFQQINENEFIYVNSYDPIRKRATNFTLEHFE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K +R K +++ + Sbjct: 180 GNKLKFKIKSNRIRWVEDDSVFRLSNYSKRTFLGDSEHFESIARKDTLFDFEIEDLAPVN 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +F E+ + + + + IP+ +T+IA +VS F R Sbjct: 240 YIAETLTFSELNQFIEDEKERGSMLTNSHLLVRHKRWSIPISAFILTIIAVAVS-SFKRR 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +A+GI GF+ I PV AA +P++L L+ +L Sbjct: 299 GGMGVNLAFGISLGFLFIFFDKIFGVLVSKSTFPPVVAAWLPLVLFGILAFFLLRY 354 >gi|83644757|ref|YP_433192.1| permease [Hahella chejuensis KCTC 2396] gi|83632800|gb|ABC28767.1| predicted Permease [Hahella chejuensis KCTC 2396] Length = 353 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 118/356 (33%), Gaps = 11/356 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY L LL + L V +++ +Y + VP I Sbjct: 4 IDRYIVATVASAMLLVLLVVLSLDLVFAFIAEMDEL--KNDYQTLQAMKYIIFTVPRRIY 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V L SEL + RA G+S+ +++ + ++ + + +LV +A Sbjct: 62 DYLPLAAFIGCLVGLGVLANNSELTVIRAAGVSVVRVVWSTMKPALAVVVVGILVGEFVA 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+I + + S W + N + + + Sbjct: 122 PQTERIAQTQKALEQGAAENVASSAGMWRREGN-----VFMHFNAVEPKGVLHGVSLFEF 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQKFS 241 + + +++ A AI D L+ + + +S N+ + + Sbjct: 177 NDERRMVRSTFAKRAIYQGDHWLLQDIERTEIKDDGSHVQTFDSLRWNVSLSPSILEVLI 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S + ++ + F+ ++ P+ + L+A S RS Sbjct: 237 IKPEYLSIKGLYTYANYQEEQG-LDANSYLMAFWKKVLQPVATSVLVLVAISFIFGPLRS 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V GI G + + ++ PV A L P+ + L +++L + Sbjct: 296 VTMGFRVFCGIIIGLLFKYMQDLLGPASLVFGFNPVIATLAPICICALLGVVLLRR 351 >gi|294673581|ref|YP_003574197.1| hypothetical protein PRU_0844 [Prevotella ruminicola 23] gi|294471872|gb|ADE81261.1| putative membrane protein [Prevotella ruminicola 23] Length = 393 Score = 119 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 114/354 (32%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L RY ++ T ++ ++ + + V D+NE + + A VP Sbjct: 34 KRLDRYIIAKFIGTYIFSIILIISISIVFDVNENLAKFSTYNAPLKAIVFDYYANFVPYF 93 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +LL P+++ + L+ + Sbjct: 94 ANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLLRPYMISAALIAAVNFYLGGY 153 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ +D ++K+ + + M + D Sbjct: 154 VIPKGNQVKMDFEAKYKNKERNLSASNVQLMVQPGVIAYLQQYDDVTKTGYGFSLDKFEN 213 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D K + + + S I ++ Sbjct: 214 KKLVSHMTASVIRYDSISDSRYHWKAQSYKIRTLKGLREEIESGAVIDTLIQMEPMDLVF 273 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + + E +++ I +T+I S+S Sbjct: 274 SKGQQETLTSTELSDYISKQVERGSVNVVQYEVEYHKRIATSFASFILTMIGVSLSSR-K 332 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + TI +F + + AA IP +L + ++ Sbjct: 333 RKGGMGMYLGIGLALSFGYILLQTISATFAINADTPALLAAWIPNLLYVIIAYF 386 >gi|312142844|ref|YP_003994290.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] gi|311903495|gb|ADQ13936.1| permease YjgP/YjgQ family protein [Halanaerobium sp. 'sapolanicus'] Length = 1063 Score = 119 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 127/347 (36%), Gaps = 12/347 (3%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 ++ +Y K L + I++ + + + N S L R+P + Sbjct: 4 KLMDKYILKEVSYPFLLGVFIITIILVGSYFFHLADLIIVK-NVPFSLVFRLLLYRLPGV 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + + P L + LNR +E+ R G+SI++L+ P + +L+ FT L+ Sbjct: 63 MVETFPIAVLFATMTAINRLNRENEITALRMGGVSIFRLVLPLFILGLLISSFTFLLNEN 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I ++I+Q + + Q + + ++ Sbjct: 123 IVPWTNHQAQNIIRQTILKDAMPDPESEVFFQGPRGR---LFYVSSYNQSSGELKNIVIY 179 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR-----IPIDKNSTTLNIPIKMDGF 237 + + + A ++ ++ L + +QY + + N + + +M Sbjct: 180 QLASEAEFPEVITAVDGLVEDNAWLLNTGIIHQYNQGGEIILESKFNQMEIELTDQMREV 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + A S E+ +++ +S I N ++ + PL A+ I S+ L Sbjct: 240 MGTQKSTAEMSRGELGRRIELFRRSGIGVNS-LLVDYHLKLAEPLA--ALLFILISLPLS 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 S I F+ Y +++ +SFG++ +L P+ AA +P Sbjct: 297 LSSKESSTWNFILTIIIVFLYYVVLSFSRSFGRNEVLSPLLAAWLPN 343 >gi|158337167|ref|YP_001518342.1| YjgP/YjgQ family membrane protein [Acaryochloris marina MBIC11017] gi|158307408|gb|ABW29025.1| membrane protein, YjgP/YjgQ family, putative [Acaryochloris marina MBIC11017] Length = 383 Score = 119 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 123/357 (34%), Gaps = 5/357 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L R+ + + ++ + F I + S + ++P + Sbjct: 20 LDRFILRAFWMPWVFAFGAFTTISFSIGALFDTLRRLTEGTLSSVDALQVLVLQLPRFMV 79 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + L R +EL+ +A G S+++++ P + S+++ + T+ + I Sbjct: 80 LALPMSMLLAPLLTYSQLARKNELIALKACGTSVYRVIRPALCFSLIVAVSTLTLNEWIV 139 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L Q + Q + Q+ + + + + Sbjct: 140 PPATAAVHRLQAQQTVSQITAIPRQNIVHQTYHHQRLTQLFHARAFDGEALHQLTILQFQ 199 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQKFS 241 D+ I + + + L + Y + + ++ + Sbjct: 200 DRHLHHIWLAKQAIWDSTHQQWILSQGTRYTIDPVSGLYQQVVPFKRHPFHQVSPQELAE 259 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHN-YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S +E + +S R + +++ L+ P + V TL+ +S+ + + Sbjct: 260 VAHQPISLHETQALIQQIKQSGNLPTLQRLQVRWHALMAFPWIGVGFTLMGSSLGCQST- 318 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 S Q + F YT I ++ G +GI A +P+++ +++ +L Sbjct: 319 SKQGSLGFGLSSLLIFGYYTFSFICQTLGDAGIWSASIAGWLPIVVLLTIGSALLHH 375 >gi|146297810|ref|YP_001192401.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] gi|146152228|gb|ABQ03082.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] Length = 362 Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 120/359 (33%), Gaps = 6/359 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+ +Y K YL T +L + + VID++E N+M E ++ A+ Sbjct: 1 MLTIIDKYILKRYLATFSVMILLFIPIGIVIDVSEKVNKMLENK-IPFTQIAIYYYNFTV 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P + I L +E++ + GIS + L P+++G+ ++ +F +L+ Sbjct: 60 YFANSLFPIFLFLSVIWFTSKLANNTEIIAILSSGISFTRFLRPYIIGASIVSVFVLLMG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + + + + KQ FI E+ +FT Sbjct: 120 FFIVPAASEGFNNFRYTYLKGNGKQLMRGENTNVFRQINDHDFIFVNSFNEESKTAFNFT 179 Query: 181 SITIDKKNKIIH----RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 +K+ R D K + + ++ Sbjct: 180 LEHFEKEKLTYKITASRIKWDPKKKIYTLYDYTKRTVGDLNDVIEKAPEKNVGFKFELAD 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + ++I + K + Y +P+ +T+IA +VS Sbjct: 240 LTPVVYIAETLTLGKLIDFIEKERKRGSGNINTYLVVLYKKYSVPVSAFILTIIAVAVS- 298 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + +A GI F I + + P+ A P I+ L++ +L Sbjct: 299 SMKRRGGMGMNLAIGIAIAFSFVFFDKIFGTLAEKSTFSPLLAVWFPNIVFGILAVYLL 357 >gi|332286756|ref|YP_004418667.1| hypothetical protein PT7_3503 [Pusillimonas sp. T7-7] gi|330430709|gb|AEC22043.1| hypothetical protein PT7_3503 [Pusillimonas sp. T7-7] Length = 392 Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 110/349 (31%), Gaps = 20/349 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY K ++T+ L+ + L L E + + +++ + A +P + + Sbjct: 6 RYLAKEIYRSTIVVLMALIGLFTFFALIEELDNLSNQ--FTLLNLFYMQALALPTTLYDL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P L+ I+ L + +ELVI R G+S +LL + +I L L+ I + Sbjct: 64 LPIGLLIGAILALAGLAQRNELVILRVSGVSGMKLLTMLWIVTIPLVFGAFLLSEIITPA 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E + + + W + S+ Q I L + D T Sbjct: 124 AEIKSSEASLTLLGKAGGGRLNSGYWFKESDEQGGTRIINIGQLKSSGNVADITLYEFKN 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-----------------NSTTLN 229 ++ A + + L V + + TL Sbjct: 184 GQELATFSTAKQGQFADGTLVLGDVKQTSINADSLSTLANAVQPDTPLTRLETLPERTLK 243 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + + S ++ + + +N R + + P L+ M Sbjct: 244 TSLTPERLIARILTPERMSIRVLLDYIDYLE-NNNLQTDRQIVALWRKMAYPFTLLVMIT 302 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 IAA +S +R V GI G + + + + G P Sbjct: 303 IAAPISFMQTRRGGVGSKVFVGILLGVGFFMLNQLALNVGMLNQWAPWV 351 >gi|170079022|ref|YP_001735660.1| permease, YjgP/YjgQ family protein [Synechococcus sp. PCC 7002] gi|169886691|gb|ACB00405.1| permease, YjgP/YjgQ family protein [Synechococcus sp. PCC 7002] Length = 373 Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 122/361 (33%), Gaps = 9/361 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + L L + + A ++P I Sbjct: 10 VLDRYIIGELNLAFAFGLGLFSALGIAVGSLFDLLAQVRESRLLFDVALKVMALKMPEFI 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P L+ ++V+ L+ SE++ R++GIS+++L+ P ++ SIL T + + + Sbjct: 70 GFALPMAVLLATLIVYSRLSGDSEIIALRSLGISVYRLVLPALIFSILATAITFVFKDQV 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++Q D + + +D T I Sbjct: 130 IPLANAQATQTLEQAFLQKQAPFRDEKIIYPEYGEDNVLKRLFYAAEFDGQQMKDLTIID 189 Query: 184 IDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + DA + ++ + + Y +N + + + Sbjct: 190 RSNGSLNQIVTADAAGWDLARNQWNFQNGIIYFIDIDGSYRNVLRFDRHQIQLSNELRVD 249 Query: 243 ----QFASRSFYEIIKKMSF---SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S ++ + M + + +F I P + +A+ ++ A++ Sbjct: 250 EELPKHEDMSLAQLQQYMQTVAADPDRDEAWLRKLRVRFQEKISFPFICLALGVVGAAIG 309 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L S + F Y + ++ S G +G L P+ AA +P ++ ++++ ++ Sbjct: 310 LRPQ-SAGKATGFGLCVGLIFGYYFLAFMISSVGVAGYLHPILAAWLPNLIVMAIASGLV 368 Query: 356 L 356 L Sbjct: 369 L 369 >gi|166364704|ref|YP_001656977.1| permease [Microcystis aeruginosa NIES-843] gi|166087077|dbj|BAG01785.1| permease [Microcystis aeruginosa NIES-843] Length = 387 Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 116/361 (32%), Gaps = 17/361 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY L L+ + L I N ++ + +VP + Sbjct: 16 LIDRYLISQLLPPFLFSVGLFASLGVAIGNLSDLANQVVDANLPLASALEILLLKVPEFV 75 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P L+ ++ + L+ SE V ++ G+++++L P S+++ + T L+ + Sbjct: 76 TYSLPVSLLLATLITYGRLSSDSETVALQSCGVTLYRLFIPTFCLSLIVTVVTFLLNEYV 135 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN---------PQQDIFIGAKKILPENH 174 + +++ Q + + + + I + + Sbjct: 136 VPNANYRATEILVQKINKEASFWKNKDFYYPDYEIKTLENGTINRNLISLFYAEQFDGEK 195 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY------GRIPIDKNSTTL 228 + + ++ I D+ ++ + Y+ R I + + Sbjct: 196 MKTVTVIRWLKQELNQIIIADSARWNAVDNVWDFFNGIIYELTPPNASYRQVIPFKAEKI 255 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAM 287 + F + S + + I+ + S R + + I P + + Sbjct: 256 ALSRSAFDFARQSRDPYEMNIPQAIEYVQLLKLSGDDKRVRFFQVRIQQKIAFPFVCIVF 315 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 I ++ R ++ + F+ Y + ++ S G + L P AA +P Sbjct: 316 ATIGCALGSLPQRISR-GTSFGLSVAIVFLYYLLNFLVGSLGLTATLSPFLAAWLPNFFG 374 Query: 348 I 348 Sbjct: 375 F 375 >gi|315125733|ref|YP_004067736.1| hypothetical protein PSM_A0635 [Pseudoalteromonas sp. SM9913] gi|315014247|gb|ADT67585.1| hypothetical protein PSM_A0635 [Pseudoalteromonas sp. SM9913] Length = 371 Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 127/361 (35%), Gaps = 14/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +++RY LK+ + L M + I E + + A ++P Sbjct: 1 MLLIFRYLTTEVLKSQVAVFLTLMTIFLSQKFVVILGDASE-GSIPAKLVFAMIALKLPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + I+ + + SE+ + +A G+S W ++ ++ S++L + ++ Sbjct: 60 LASLILPLSLFLGIILAYSRIYADSEMTVLKACGVSEWYVVRITLISSVILALLAAVLTL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + L +Q K + + Q N + +FI + + Sbjct: 120 YVAPWASEQEYQLKEQAKADAGLSALRAGRFQQTGNEKAVVFIHNIENGGKELNKVFVAQ 179 Query: 182 ITIDKKNKIIHRKDADL-----AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + +K + A+ A ++ L Y+ N T + Sbjct: 180 LPDSEKGDLARLVYAEQGVVIEAQSGEQQLVLTDGKRYETDGEAPSLNLTEFDGYSVQIR 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q+ Q + MS + A Q+ + + IPL + +TL+A +S+ Sbjct: 240 EQEIEHQRRKLEAVPTRELMSI-------NTPEAIAQWQWRLAIPLSIPLLTLLAVPLSV 292 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + +V I + ++ K + G + P + + + L+++ Sbjct: 293 VNPRQGKFAKLVP-AISLYLGYFILLNAAKFAVEDGKIPPSIGLWWIHLSALFIGSLLII 351 Query: 357 Q 357 + Sbjct: 352 R 352 >gi|256829582|ref|YP_003158310.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] gi|256578758|gb|ACU89894.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] Length = 360 Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 122/359 (33%), Gaps = 9/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L L + + IDL + + E +S R P Sbjct: 1 MNLLTRYILRQNLFLLLLVCGIGLGIYVFIDLFDRLDNFLE-AGVGLSSVGAYFLYRTPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ QI P + L+ +V + R+ EL+ A +S + + ++ L + + Sbjct: 60 ILAQIFPAVFLIALMVQMGLMLRSRELLALEACSVSPGAVAKSVIWYALALCVAQLFFSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + SG + + + + +K + + + + +G+ + Sbjct: 120 ALGVSGHRAAERIWNEEVRDRQIEKRQLSD-LWFREGNRIVHMGSVTPAAGRGLELTVHV 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQ 238 + D I A + L V + + L + Sbjct: 179 LEDDDAGSIREIIRAQEFTSAPEGWLLSGVTRTLPATFEVQKAAQMELDLRTDVSSFLIV 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S ++ ++ S + R +T ++ + ++ M LIA +V Sbjct: 239 DPKTRLESLPLLQLGAEIKRLRDSGS-NIERLQTAWHMKLAYAGSVLVMALIALAVV--- 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 S +I+ G+ + F Y + + S G+ G++ PV AA +++ LL+ Sbjct: 295 SFFGSLFVIIPLGLVATFCYYGLFVLCASAGEKGLVPPVLAAWAANAFFTAVAGGWLLR 353 >gi|288926740|ref|ZP_06420651.1| membrane protein [Prevotella buccae D17] gi|288336470|gb|EFC74845.1| membrane protein [Prevotella buccae D17] Length = 367 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 4/355 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL Y K ++ T + + + + V D NE ++ + + A +P Sbjct: 8 KILDWYIIKKFIGTYFFSIALIISIAIVFDFNENLSKFTQYHAPWRAIVFDYYANFIPYY 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ +L+ T + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCVLIAALTYYLGAY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 G I D +++N +D + I + Sbjct: 128 EIPHGTVIRQDFEALYRNNTKNTAADNVQLQVDKGVIAYIQHYDNNTKKGYGFKLNKFED 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D +++ + + + S I ++ Sbjct: 188 KKLVSDLTAMEVQYDTISDTKFHWRMRNWKQRKLQGLKEHITSGAEKDTVILMEPTDLVY 247 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ + +S + + + +++ I +T+I S+S Sbjct: 248 SKGQQETFTSPELREYISKQIDRGSSNVVQYQVEYHKRIATSFASFILTVIGLSLSSR-K 306 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + G+ F + T+ +F + P+ AA P ++ ++ + Sbjct: 307 RKGGMGLYLGLGLALSFGYIMLQTVSATFAINAGAPPMLAAWTPNMVFAIVAYFL 361 >gi|119471263|ref|ZP_01613766.1| hypothetical protein ATW7_11365 [Alteromonadales bacterium TW-7] gi|119445729|gb|EAW27012.1| hypothetical protein ATW7_11365 [Alteromonadales bacterium TW-7] Length = 370 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 127/356 (35%), Gaps = 8/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY LK+ + L M + L I E + + A ++P + Sbjct: 2 LIFRYLTAEVLKSQVAVFLTLMTIFLSQKLVVILGDASE-GSIPAQLVLSMIALKLPQLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + I+ + + SE+ + +A G+S W ++ ++ S L + + + Sbjct: 61 SLILPLSIFLGIILAYSRIYADSEMTVLKACGVSEWYVVRVTLISSAGLALLAGALTMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L +Q K + + + N + +FI + + + Sbjct: 121 APWASEQEYQLKEQAKADAGLSALRAGRFQETGNEKAVVFIHNIENGGKELNKVFVAQLP 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ A+ ++ + + + + + F +S Q Sbjct: 181 NSDNDELARLVYAEQGVVIE----AQNGEQQLVLTDGKRYETDATTPALNLTEFDGYSVQ 236 Query: 244 FASRSFYEIIKKMSFSNKSNIF--HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +K+ + + + + Q+ + I IPL + +TL+A +S+ R Sbjct: 237 IREQEIEHQRRKLEAVPTNQLLAINTPESIAQWQWRIAIPLSIPLLTLLAVPLSVVNPRQ 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +V I + ++ K + G + P + + + L++++ Sbjct: 297 GKFAKLVP-AISLYLGYFILLNAAKFAIEDGKIPPSIGLWWIHLSALFIGGLLIIK 351 >gi|187929752|ref|YP_001900239.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|309781532|ref|ZP_07676268.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|187726642|gb|ACD27807.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|308919945|gb|EFP65606.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 397 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 49/397 (12%), Positives = 109/397 (27%), Gaps = 42/397 (10%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP + +YF + ++ L + L D+ + Y+ + P Sbjct: 3 MP-VYEKYFARQIYGVFVFILFAVLALFIFFDMLGELGSVVGR--YTTLVAFFHVMLQAP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++IP L+ I VF + SE I R G+ + L ++ L + T L Sbjct: 60 TRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYLFG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP---------------------- 158 I E+ + + W++ P Sbjct: 120 EFIGPKAEEYAQKVRLEALGATVSAGFRSGVWVKDRGPAKPDGTGGEVTRFVNVGALQPD 179 Query: 159 ----QQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKL------ 208 I+ + D + ++ + + Sbjct: 180 QSIKGLRIYEFDSDYRLSSIRVADQARYQGHQNWQLNDVTETRFVEFPRKPGTVAPQDTV 239 Query: 209 ------KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS 262 + + + + + ++ + + Sbjct: 240 QAVPGAPDALAPDFRGEQTKLPHQEMRSELTPQILSVLMVTPDRMATLDLFQYIRHLRD- 298 Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 N R E + +V P ++ M +A + +R+ + V GI G + Sbjct: 299 NKQDTQRYEIALWKKVVYPFTVLVMMALALPFAYLHARAGAVGLKVFGGIMLGLSFQLVN 358 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + G + A++P L ++L+++ L E Sbjct: 359 NLFSHVGLLNTWPAIFTAIVPGALYLALALVSLRWVE 395 >gi|110637606|ref|YP_677813.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280287|gb|ABG58473.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 359 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 127/357 (35%), Gaps = 2/357 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K +L T + +L M+++ VID+ E + +P Sbjct: 1 MKKLDLYIIKKFLVTYFFVVLMFMLVITVIDITEKMEDFMKHKLSIWFILVEYYFAFIPY 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P + I V NL +E++ + G+S+ +++ P+++GSIL+ + Sbjct: 61 MANLLSPITIFIATIFVTANLAARTEIIAMLSSGMSLTRIMYPYLIGSILIAFMVFYMSG 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G K +D +++ + + + I +I + Sbjct: 121 WLIPHGNKKRVDFEKKYIKSTFFYEGRNVHMKTAPTTYVYIESYNSEINVGYQFTLETII 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS-TTLNIPIKMDGFQKF 240 R + + + + + G+ + K + I F+ Sbjct: 181 DNRLVSKLKAARMNWNDSTKKWRMEEYFIRRFTEDGKEEVFKGRGLDTALTITPKDFEDT 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 F + E+ +++ + T+ Y P ++ +TLI S SR Sbjct: 241 YMLFETYDMGELNNQIALLEARGSENISTYITEKYQRYTYPFSVIILTLIGVIASSRKSR 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +A+G F+ + +S G + P+ A+ IP I+ I + +++ + Sbjct: 301 EG-AGLTIAFGFLLAFVYIIFMITSRSLANVGGIGPLFASWIPNIVFIVIGLIMYRR 356 >gi|317477038|ref|ZP_07936280.1| hypothetical protein HMPREF1016_03264 [Bacteroides eggerthii 1_2_48FAA] gi|316906831|gb|EFV28543.1| hypothetical protein HMPREF1016_03264 [Bacteroides eggerthii 1_2_48FAA] Length = 393 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 117/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 36 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWEAIIFDYYMNFIPYF 95 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ + T + + Sbjct: 96 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVTTFCLGSY 155 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + I S I D Sbjct: 156 VIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFKD 215 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ VK + E R I K + ++ F Sbjct: 216 KQLVSHLTARSITYDTATVHKWTVKDYMIREMDGMRESIVKGEKMDTILFMEPADFLIMK 275 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + ++ + + E +++ I + +TLI S+S + ++ Sbjct: 276 NQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTKG 335 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + P A IP +L ++ + Sbjct: 336 GMGLHLGIG-LGLSFSYILFQTIASTFAVNGNVPPFIAVWIPNLLYAFIAFYL 387 >gi|157413956|ref|YP_001484822.1| putative permease [Prochlorococcus marinus str. MIT 9215] gi|157388531|gb|ABV51236.1| Permease [Prochlorococcus marinus str. MIT 9215] Length = 403 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/373 (12%), Positives = 115/373 (30%), Gaps = 19/373 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ + ++ + ++ + + + + + +P + Sbjct: 27 LLDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKVVEYGLPLFLALKVLFFSLPSFL 86 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ +++GI +++ P + SI + T + + Sbjct: 87 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIFMTGLTFYFNDNL 146 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN--------------PQQDIFIGAKKI 169 K+ ++ + ++ M Q I + Sbjct: 147 VPKSNKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTKNYSQLTHIFYAQW 206 Query: 170 LPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNS 225 + + + I + D+ N K I Sbjct: 207 YKNKLMGNVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSITPSGQTTNIQFKE 266 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLML 284 T K + + + I+ K+ R + + +P Sbjct: 267 YTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNIKEVRRIKVRIQEKFTLPFAC 326 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + LI +S+ + + + + + Y + I S G G+L P+ AA +PV Sbjct: 327 LVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSLGVKGLLPPIFAAWLPV 386 Query: 345 ILTISLSILILLQ 357 ++++ I +L + Sbjct: 387 LISLGGGIYLLRK 399 >gi|315608793|ref|ZP_07883769.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315249487|gb|EFU29500.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 416 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 4/355 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL Y K ++ T + + + + V D NE ++ + + A +P Sbjct: 57 KILDWYIIKKFIGTYFFSIALIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYY 116 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ +L+ T + Sbjct: 117 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCVLIAALTYYLGAY 176 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 G I D +++N +D + I + Sbjct: 177 EIPHGTVIRQDFEALYRNNTKNTAADNVQLQVDKGVIAYIQHYDNNTKKGYGFKLNKFED 236 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D +++ + + + S I ++ Sbjct: 237 KKLVSDLTAMEVQYDTISDTKFHWRMRNWKQRKLQGLKEHITSGAEKDTVILMEPTDLVY 296 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ + +S + + + +++ I +T+I S+S Sbjct: 297 SKGQQETFTSPELREYISKQIDRGSSNVVQYQVEYHKRIATSFASFILTVIGLSLSSR-K 355 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + G+ F + T+ +F + P+ AA P ++ ++ + Sbjct: 356 RKGGMGLYLGLGLALSFGYIMLQTVSATFAINAGAPPMLAAWTPNMVFAIVAYFL 410 >gi|241663807|ref|YP_002982167.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] gi|240865834|gb|ACS63495.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] Length = 397 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 112/397 (28%), Gaps = 42/397 (10%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP + +YF + ++ L + L D+ + Y+ + P Sbjct: 3 MP-VYEKYFARQIYGVFVFILFAVLALFIFFDMLGELGSVVGR--YTTLVAFFHVMLQAP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++IP L+ I VF + SE I R G+ + L ++ L + T + Sbjct: 60 TRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRRALLSLFKIALPLALVTYIFG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAKKILPE 172 I E+ + + W++ P + F+ + P+ Sbjct: 120 EFIGPKAEEYAQKVRLEALGATVSAGFRSGVWVKDRGPAKADGTGGEVTRFVNVGALQPD 179 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------------------ 214 I R + +L V E Sbjct: 180 QSIKGLRIYEFDSDYRLSSIRVAEQARYQGHQNWQLNDVTETRFVEFPRKPGTVAPQDTV 239 Query: 215 ------------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS 262 + + + + ++ + + Sbjct: 240 QAVPGAPDALAPDFRGEQTKLPHQEMRSELTPQILSVLMVTPDRMATLDLFQYIRHLRD- 298 Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 N R E + +V P ++ M +A + +R+ + V GI G + Sbjct: 299 NKQDTQRYEIALWKKVVYPFTVLVMMALALPFAYLHARAGAVGLKVFGGIMLGLSFQLVN 358 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + G + A++P L ++L+++ L E Sbjct: 359 NLFSHVGLLNTWPAIFTAIVPGALYLALALISLRWVE 395 >gi|317503389|ref|ZP_07961433.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665484|gb|EFV05107.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 385 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 113/354 (31%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K ++ T +Y + + + VID+NE + E + +P Sbjct: 26 KRLDWYIIKKFIGTYIYSIALIISISIVIDINENLAKFSEYHAPLKAIVFDYYMNFIPYF 85 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ IL+ + + + Sbjct: 86 ANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMISCILISVVSFYLSGY 145 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + I + +K+ +D + I D Sbjct: 146 VIPHSNVIRQNFESLYKNKKKTTAADNVMLNVGKGTIAYIQHYDNNTKRGYGFSLDKFQD 205 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D + ++ + I ++ + Sbjct: 206 KKLVSHMTAMEIQYDTISDSKYHWTAQNYKIRKFNGYREQIENGAKRDTTILMEPNDLVY 265 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + + +++ I +T+I S+S + Sbjct: 266 SKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILTIIGLSLSAK-K 324 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + L P+ AA IP I+ ++ Sbjct: 325 RKGGMGMYLGIGLALSFGYIMLQTVSSTFAINANLPPIIAAWIPNIIFAIVAYF 378 >gi|281422528|ref|ZP_06253527.1| putative membrane protein [Prevotella copri DSM 18205] gi|281403352|gb|EFB34032.1| putative membrane protein [Prevotella copri DSM 18205] Length = 413 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 107/354 (30%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L + + + + V D NE ++ E + + A VP Sbjct: 54 KKLDWYIIKKFLGYYFFSIALIISIAIVFDFNENLSKFTEHHAPARAIIFDYYANFVPYF 113 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 V I+ L SE++ A G+S +LL P+++ +LL + + Sbjct: 114 ANLFSALFVFVAVILFTTKLASNSEIIAILASGVSFKRLLRPYMITCVLLSALSFGLSAY 173 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +K+ ++ + + + D Sbjct: 174 VIPHGTVIRQNFETMYKNKKKNTSAENVQLQVDKGVIAYMQHYDNSMKRGYGFCLDKFQD 233 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D KL + + S I ++ Sbjct: 234 KKLVSHLTAMDIQYDTISDSKYHWKLSNWKIRKLQGMKEHITSGAQKDTIIMMEPTDLVY 293 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + E +++ I +T+I S+S Sbjct: 294 SKGQQETFTSPELRDYISKQINRGSGNVVQYEVEYHKRIASSFASFILTIIGVSLSAR-K 352 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + G+ F + T+ +F V AA +P L ++ Sbjct: 353 RKGGMGAALGVGLALSFGYIMLQTVSATFAIQANFPSVLAAWLPNFLFAIVAYF 406 >gi|123969132|ref|YP_001009990.1| putative permease [Prochlorococcus marinus str. AS9601] gi|123199242|gb|ABM70883.1| possible permease [Prochlorococcus marinus str. AS9601] Length = 401 Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 114/373 (30%), Gaps = 19/373 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ + L+ + ++ + + + + + +P + Sbjct: 25 LIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSLPSFL 84 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ +++GI ++++P + SI + T + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNL 144 Query: 124 ATSGEKIGIDL--------------IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKI 169 K+ + + + + N + I + Sbjct: 145 VPKSNKLAETTLRAGIGSSFSEEKGKENIMFSRYGSRINSETKKPTKNNSKLTHIFYSQW 204 Query: 170 LPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNS 225 + + + I + ++ + I Sbjct: 205 YENKIMKNVTVLDFSREDFQQILKANSGRFDKKSSSWIFSNGSIVSIDSGGQTTNIQFKE 264 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLML 284 K + + + I+ K+ R + + +P Sbjct: 265 YKYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNLKEVRRMKVRIQEKFTLPFAC 324 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + LI +S+ + + + + + Y + I SFG GIL P+ AA +PV Sbjct: 325 LVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPPIFAAWLPV 384 Query: 345 ILTISLSILILLQ 357 ++++ I +L + Sbjct: 385 LISLGGGIYLLRK 397 >gi|86605800|ref|YP_474563.1| YjgP/YjgQ family protein [Synechococcus sp. JA-3-3Ab] gi|86554342|gb|ABC99300.1| putative membrane protein, YjgP/YjgQ family [Synechococcus sp. JA-3-3Ab] Length = 376 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 126/354 (35%), Gaps = 14/354 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY F L L + G +L+ L + ++ E + L +P ++ Sbjct: 10 LLERYLFGQMLTPVLAGIAGGTLLLLAGRLFTLAERLVE-GSVPPLTVLRLLILDLPEMV 68 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P ++ L+ SE+ RA GI ++ P ++ +L+ + + N + Sbjct: 69 LLGMPIAAFFATMLTLGKLSGNSEITAMRAAGIPFTRIFRPLLLVGLLMSLSAFWISNVL 128 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + QQ + + + I + +T Sbjct: 129 LPASKREIRQIDQQALLARATTPVQYDVFFRTARVGGTEDNLWFFIRQVDPRLNTMQDVT 188 Query: 184 IDKKNKIIHRKDA-------DLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIP 231 I + + + K A+ L + V ++YG + L + Sbjct: 189 ILQVDPLPGGKYQLAEVTLAAQAVWNGLDWTLSEGVTHRYGPDGLSLAEEPFDRKPLEVS 248 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 + + S E+ +++S +SN + T+F+ +PL LI+ Sbjct: 249 QDLAALMQPPVPPNELSLPELAERISRLARSN-LNTQPLRTEFHMRFSLPLASFFAVLIS 307 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + +R V +GI F Y ++++ +S G++G L P AAA I Sbjct: 308 LPLGSTTARRVGRYGGVVFGILLVFAYYVVLSVSRSLGEAGALPPWAAAWSFNI 361 >gi|157374154|ref|YP_001472754.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] gi|157316528|gb|ABV35626.1| permease YjgP/YjgQ family protein [Shewanella sediminis HAW-EB3] Length = 370 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 113/357 (31%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + K + L + + + + + S L +P + Sbjct: 2 IVFRYLIREVFKAQIAVLFVLLAIFISQHFVRVLANASD-GEFPASLVMTLLGLNLPYLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + SE+V+ +G+S W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILLAHGRMYAESEMVVLHGVGVSEWYITRVTLLLAVINMLFTGYLSVFV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ-----QDIFIGAKKILPENHIWED 178 E+ +++ + + N + + I + D Sbjct: 121 TPWAEEKQNQVLESAQSEAGLAAITQGRFQTSPNGRAVLFVERIDRDNQLDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + +++L V+YQ +D Q Sbjct: 181 PEDESGQSNIVMAKGGSVVEDGSGGQRLQLNDGVQYQGTPKKVDFQVVEFGGYQMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S I M+ F++ + IPL + MTLIA ++ Sbjct: 241 EVDERRRKLSALPIKDLMALDGPEATAE-------FHWRLAIPLAIPLMTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + I + ++ + + G++ + L IL+L Sbjct: 294 VRQGKFAK-MFPAILLYLGYFGLMIAGRKALEDGVVPAYLGMWWIHASALFLGILLL 349 >gi|87198520|ref|YP_495777.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] gi|87134201|gb|ABD24943.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] Length = 366 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 124/359 (34%), Gaps = 4/359 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y K + + LL ++++ ++DL + P + R+P ++ Sbjct: 10 TLAIYIAKMFAVRIVAVLLMLVLVLQMLDLLSESGAVLAAPGNGQGELLTYVSLRMPQLV 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P+ L+ I+ LN+ SE++ +A G+S Q+L P + + + T I Sbjct: 70 SRFLPYSVLLATIITLMTLNQNSEVIAMKAAGLSAHQVLAPLFLVAAATSVVTFAFNERI 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 T Q +S + + + +F + + + Sbjct: 130 VTRSTSTLKAW-QDVDYGPIPVESATKSNVWLQDGPNILFARSVAGQGKAMHMTGVSWYR 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK--NSTTLNIPIKMDGFQKFS 241 D + A A N + ++ V + S ++ Sbjct: 189 RDPTGMVTEIVTAPSASYANPGWRFREPVMFDVQSARKTALAASEVFAKSVEPVQVVISR 248 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ ++ + F + +++ I PL + M L+ A + +RS Sbjct: 249 VDADAESLTQLTGSLAAIRDAG-FRTTELDGKWWHKISGPLSALLMPLLGAVAAFGLARS 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G+ GF + + G G P AA P +L + + +L++ E+ Sbjct: 308 GHLFVRAVIGMALGFAYFVFDNAALAMGNFGAYPPFLAAWAPFVLFLLIGETVLIRTEE 366 >gi|160872818|ref|ZP_02062950.1| permease [Rickettsiella grylli] gi|159121617|gb|EDP46955.1| permease [Rickettsiella grylli] Length = 355 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 119/357 (33%), Gaps = 9/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY + + TTL L +IL +I L +G +Y+++ +P Sbjct: 1 MNIIDRYLGRTIIHTTLSVLGILLILFALIQLISETRDIG-TGHYTLTSAFSYVLLTLPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 P L+ +I+ L++ SEL+I A G+S++Q+ + ++ + TVL+ Sbjct: 60 QFYNFFPIAILLGSILGLNVLSKHSELMILHANGVSLYQMAWSLIKATLWMVFITVLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ G + + + + Sbjct: 120 GLAPHAARLAESHKFFLTTKGQTLTTQQGSVWIRDGHNFIYI----QSILDPTHLNHVNC 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 D N ++ A + + K Sbjct: 176 YQFDDDNNLLKASFAKQVNYKAKAWHAYDIATSLITLNKVKKKFIAHEIWPFSFSPKLLT 235 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S ++ + + + N + F+ IV P+ L M +A S + Sbjct: 236 ISIIKPEEMSLRQLHEYIHYRK-KNHLNTSPYSFAFWKRIVEPISLWVMMCLAIPFSFKH 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R+ + GI GF Y + + F P AAL+P+ + + ++IL++ Sbjct: 295 LRTLATSLKTLAGITIGFSFYLLNNFLGPFAIVYQWPPFLAALLPLFIFMLIAILLM 351 >gi|88703587|ref|ZP_01101303.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] gi|88702301|gb|EAQ99404.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] Length = 352 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 128/360 (35%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + + L LL + + + + + +Y + +P Sbjct: 1 MRK-LNRYVARTVWLSILLVLLVIVGIDGLSAFIDESD--SRSASYGFAEIGRYVMLTMP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + IPF L+ ++ L TSELV+ RA GIS +L + ++++ +F L+ Sbjct: 58 RRVYEFIPFAALIGALIGLGQLASTSELVVMRAAGISNGRLAWMVLKQALVIAVFGFLLG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA E+ + G + ++ W + + + ++ T Sbjct: 118 EYIAPKAEQQAQSGRAIARYAGRQVDTEQGIWRRDGA-----VFFHVQAIAPDNEVFGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 + ++ + AD + +L+ V ++ R + K S L I Sbjct: 173 AYEFEEDGWMQRALFADSGRYDGEGWRLRDVQSSEFSRDRVRKASAPALFLPSNITPKIL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + +++ +F E + ++ P + A+ LIA S Sbjct: 233 SLENVAPSQLTLVDLVDYAAFLRSQGE-DVADFELATWRKLMQPAAVAALVLIAISFVFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ G + ++ P+ AAL PV+ + + + +L + Sbjct: 292 PLRDGTLGFRIFAGVMVGILFQLSQDLLGPASLVFGFPPLYAALAPVLSCVLVGLYLLRK 351 >gi|317969817|ref|ZP_07971207.1| permease [Synechococcus sp. CB0205] Length = 400 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 102/355 (28%), Gaps = 17/355 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ F L L+ + + + + + + + A R+P + Sbjct: 27 LLDRWLFAEMLGPLLFGIAAFTAVSLSVGVVFELVRKVAEAGLPLWAAGKVLALRMPGFL 86 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ F L+ +SEL R+IG+ W+++ P +V + L+ + T + + I Sbjct: 87 VLSFPMATLMATLLAFSRLSGSSELTALRSIGVKTWRMVVPALVLAALMTLLTFVFNDVI 146 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS----------------NPQQDIFIGAK 167 S +++ ++ Sbjct: 147 VPSANYSASNVLDSALGRALSAQTGKNVVYSRFGRITPKEPGGNAGEGLTQLFYAKEFKN 206 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT 227 + + + D + A+ ++ + + S Sbjct: 207 GEMQGVTLLDFSREDQQQVLTANTAVWDENRAMWEFRNGRILNIDAANNFTTSANYTSYY 266 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVA 286 A + + + + ++ R + P + + Sbjct: 267 YPFTRAPQDVGMLPSDAAQMTVAQARRAEALLVQAGDQKEARRLRVRIQEKFAFPAICLV 326 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 LI +S+ + + + F Y + I S G G L P AA Sbjct: 327 FGLIGSSLGVRPNSRTSRSQGFGISVLLIFGYYLMSFIFSSLGIKGTLYPFFAAW 381 >gi|294788100|ref|ZP_06753344.1| permease, YjgP/YjgQ family [Simonsiella muelleri ATCC 29453] gi|294484393|gb|EFG32076.1| permease, YjgP/YjgQ family [Simonsiella muelleri ATCC 29453] Length = 355 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 134/361 (37%), Gaps = 11/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K + Y LL + L IDL +G+ NY+ ++P Sbjct: 1 MKLLTKYLIKRLTVMSCYALLAVLALYSFIDLLSEIGNVGK-GNYTGWTAFKYIIMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q++P TL+ ++ L+ +SEL + + G+S ++ + S + + T+L+ Sbjct: 60 RAYQLMPLATLIGGLLALSQLSSSSELAVIKTSGLSTADIIRIILKFSAIFALATILLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + K++ S W++ +I + ++ + Sbjct: 120 WLAPELGRRADAMKTTAKESSITA-SVTGLWLRQGENIVNI-----AAMLPDNTLTNIRI 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMDGFQ 238 + + ++ A+ A +++ K L+ Q I + Sbjct: 174 WRYNPQFELTEAIIAEKAQVHDGKWVLQNAKISQLTNKHINIQHIKQMNWQTNINQNLLN 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + SF + + + + N + ++ +V P+ + M+L+A + + Sbjct: 234 VLVVKPEQMSFSALTRYIKYLK-KNQQQTSAYDVVWWNKLVYPIATMVMSLVALAFTPNS 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + + GI G + + + + + +A++P ++ ++ ++ Sbjct: 293 ARHSNMGLKLFSGICLGLLFFFTGRLFGFTTQLYGVPAFFSAILPTATFALWAVYLIHKQ 352 Query: 359 E 359 E Sbjct: 353 E 353 >gi|239993538|ref|ZP_04714062.1| permease YjgP/YjgQ [Alteromonas macleodii ATCC 27126] Length = 366 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 117/356 (32%), Gaps = 9/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY K LK+ L M + + + + + P++ Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASD-GDIPAGLVLGFLGLYAPILS 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ L SE+ + RA GIS W + + S+L+ I T + Sbjct: 61 SLVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLFLSVLIMIVTGAITLYF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI--WEDFTS 181 A + L ++ ++ + Q N + IF+ + + Sbjct: 121 APLAAENEYQLREKARNEAGISALMPGRFQQTGNEKAVIFVHDVDNNDKLQRVFLSQNQT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++++ + ++A + L QY +K + Sbjct: 181 DDSEGDVRVVYAQTGEVANNPDGTRNLVLKEGVQYEGKQSEKAFRKVEFDEYQIQIADKP 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 R + N+ + A + + I IPL + + LIA +S R Sbjct: 241 ADETRRKVSVLPT-----NELWEDDSIEARAELQWRIAIPLSIPFLVLIAVPLSAVDPRQ 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + I + ++ + + G + P + + + ++++++ Sbjct: 296 GRFGK-MFPAILLYLGYFLLLLASRRVLEDGKMPPQLGLWWVHTIMLIIGVMLIVR 350 >gi|127511873|ref|YP_001093070.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] gi|126637168|gb|ABO22811.1| permease YjgP/YjgQ family protein [Shewanella loihica PV-4] Length = 370 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 117/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + LK + LL + + + + + S L +P + Sbjct: 2 IVFRYLIREVLKAQMAVLLVLLAIFISQHFVRVLADASD-GEFPASLVMTLLGLNLPYLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V + SE+V+ ++G+S W + ++ ++ +FT ++ + Sbjct: 61 VLVVPLSLFLGILVAHGRMYAESEMVVFHSVGVSEWYVTRVTLLLAVANMLFTGFLVIYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 E+ +++ + + N + +F+ + D Sbjct: 121 TPWAEETQNRVLENAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + ++KL ++YQ + +D Q Sbjct: 181 PEDGASQSNIVVAQGGSVIEDESGEQRLKLNDGIQYQSKQNQLDYQVVQFAGYEMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + ++ S I + + + F++ + IPL + MTLIA ++ Sbjct: 241 EVDQRRRKLSALPIDQLLDTEGPEAVAE-------FHWRLAIPLAIPFMTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + I + ++ + + ++ + L +L+L Sbjct: 294 VRQGKFAK-MFPAILLYLGYFGLMIAGRKALEDEVIPAYLGMWWIHASALFLGMLLL 349 >gi|270340118|ref|ZP_06007105.2| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270332630|gb|EFA43416.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 395 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 113/353 (32%), Gaps = 4/353 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K ++ T ++ +L + + V D+NE + + + A VP Sbjct: 36 KRIDWYIIKKFIGTYIFSILLIISISIVFDVNENLAKFSQYHAPLEAIVFDYYANFVPYF 95 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + I L SE++ A G+S +LL P+++ +LL + + Sbjct: 96 ANLFSALFVFISVIFFTSKLAGNSEIIAMLATGMSFKRLLRPYMITCVLLAGLSYYLSAY 155 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +K+ ++ + I + D Sbjct: 156 VIPHGTVIRQNFETMYKNKHKNTSAENVQLQVGRGVIAYIQHYDNTMKKGYGFCLDKFEN 215 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN---IPIKMDGFQK 239 + D KL + + S I ++ Sbjct: 216 KKLVSHLTAMEVQYDTISDSKYHWKLTNWKIRRLKGLREHITSGAEKDSVIMMEPTDLVY 275 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + + +++ I +T+I AS+S Sbjct: 276 SKGQQETFTSPELKDYISKQIDRGSGNVVQYQVEYHKRIASSFASFILTIIGASLSSR-K 334 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 R + + G+ F + T+ +F + P+ AA IP I+ ++ Sbjct: 335 RKGGMGMYLGIGLALSFTYIMMQTVSATFAINAYFPPMLAAWIPNIVFAVIAF 387 >gi|207721412|ref|YP_002251853.1| permease protein [Ralstonia solanacearum MolK2] gi|206586571|emb|CAQ17158.1| permease protein [Ralstonia solanacearum MolK2] Length = 401 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 51/402 (12%), Positives = 112/402 (27%), Gaps = 46/402 (11%) Query: 1 MPGIL-----WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLA 55 M +L +YF + ++ L + L D+ + Y+ Sbjct: 1 MMKMLKMPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGR--YTTLIAFFHV 58 Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 + P + ++IP L+ I VF + SE I R G+ L ++ L + Sbjct: 59 MLQAPTRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALV 118 Query: 116 TVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAK 167 T + I E+ + + + W++ P + F+ Sbjct: 119 TYVFGEFIGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVG 178 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------------- 214 + P+ I R + +L V + Sbjct: 179 SLQPDQTIRSLRIYEFDADYRLSSIRVAQQARYQGHQSWELDDVTQTHFIEFPRKAGAAA 238 Query: 215 -----------------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + + + ++ + + Sbjct: 239 PQDNRQAVPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIR 298 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 N R E + +V P ++ M +A + +R+ + V GI G Sbjct: 299 HLRD-NKQDTQRYEIALWKKVVYPFTVLVMMALALPFAYLHARAGAVGLKVFGGIMLGLS 357 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + G + A++P L ++++++ L E Sbjct: 358 FQLVNNLFSHVGLLNTWPAIFTAIVPGALYLAVALIALRWVE 399 >gi|83746688|ref|ZP_00943737.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|207742607|ref|YP_002258999.1| permease protein [Ralstonia solanacearum IPO1609] gi|83726641|gb|EAP73770.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|206594001|emb|CAQ60928.1| permease protein [Ralstonia solanacearum IPO1609] Length = 401 Score = 117 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 52/402 (12%), Positives = 112/402 (27%), Gaps = 46/402 (11%) Query: 1 MPGIL-----WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLA 55 M +L +YF + ++ L + L D+ + Y+ Sbjct: 1 MMKMLKMPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGR--YTTLIAFFHV 58 Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 + P + ++IP L+ I VF + SE I R G+ L ++ L + Sbjct: 59 MLQAPTRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALV 118 Query: 116 TVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAK 167 T + I E+ + + + W++ P + F+ Sbjct: 119 TYVFGEFIGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVG 178 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------------- 214 + P+ I R + +L V E Sbjct: 179 SLQPDQTIRSLRIYEFDADYRLSSIRVAQQARYQGHQSWELDDVTETHFIEFPRKAGAAA 238 Query: 215 -----------------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + + + ++ + + Sbjct: 239 PQDNRQAVPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIR 298 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 N R E + +V P ++ M +A + +R+ + V GI G Sbjct: 299 HLRD-NKQDTQRYEIALWKKVVYPFTVLVMMALALPFAYLHARAGAVGLKVFGGIMLGLS 357 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + G + A++P L ++++++ L E Sbjct: 358 FQLVNNLFSHVGLLNTWPAIFTAIVPGALYLAVALIALRWVE 399 >gi|307155108|ref|YP_003890492.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] gi|306985336|gb|ADN17217.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 7822] Length = 405 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 111/369 (30%), Gaps = 16/369 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + + + I + + I + RVP Sbjct: 37 DRYIATQLIPPYILSVGLFTSMGVAIANLSDLSNKVLEYDLPIVDALKILLYRVPEFFSY 96 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P L+ ++ + L+ SEL+ R+ GIS+W+ P V+ S+++ T + + Sbjct: 97 ALPISVLLTTLMTYGRLSSESELIALRSCGISLWRATIPAVMLSLIVTGLTFIFNECVVP 156 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ + + + + + L E F + Sbjct: 157 ETNYRATGILVKVLHEERHFWQNKDIFYPNYEQIKLPNGQTLRQLKSLFYAEKFDGQKMQ 216 Query: 186 KKNKIIH---------RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM-- 234 I D + Y K + T Sbjct: 217 SLTIINWLGERLNEIVVSDTAQWNSDQNIWDFFDGTVYLIDGNAAYKEAVTFKHQQFPLP 276 Query: 235 ---DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLI 290 F + ++ ++ + +S N R E + I P + + ++ Sbjct: 277 KEAFEFASQGRSPYEMNLFQAVQYKNLLQESGDTKNVRFFEVRIQQKIAFPFICLVFGVM 336 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A++ + + ++ + + F Y + SFG G+L P AA +P + + Sbjct: 337 GAAIGAKPQQMSR-GTSLGLTVGIVFAYYMVNFFTGSFGMIGLLSPSMAAWLPNFFGVGI 395 Query: 351 SILILLQKE 359 IL + E Sbjct: 396 GGWILKKLE 404 >gi|149927924|ref|ZP_01916174.1| YjgP/YjgQ like transporter [Limnobacter sp. MED105] gi|149823363|gb|EDM82596.1| YjgP/YjgQ like transporter [Limnobacter sp. MED105] Length = 401 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 56/374 (14%), Positives = 120/374 (32%), Gaps = 26/374 (6%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 YF K + ++ + L DL +++ LP S V +P + +I Sbjct: 14 YFRSELYKAISFVMVAFVGLFAFFDLIAEVDRLS-LPGTSWFYYFVAVLLGLPARVYEIA 72 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P L+ +I L +SEL RA G+S +L V + + + TVL +A Sbjct: 73 PIAALIGSIYALVQLAASSELTAMRAAGLSTTSMLKMLVRIAAGVVVITVLFGEAVAPLA 132 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 E+ + + + + WM+ + D + + ++ + + Sbjct: 133 ERAAVPMRAKALGYEVDRDFRSGYWMRDTYSAPDAESRVRFVNFDSFNKDGELLKLEYYE 192 Query: 188 NKI------IHRKDADLAIIYNDKVKLKKVVEYQYGRI------------------PIDK 223 R ++ + +L+ V+ +Y Sbjct: 193 LDPESRIRAWVRAESAKFDPDSGDWELRNVLVQRYFDEAVSNANAARAGLTIQASEFESL 252 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + S +++ F SN+ + F I+ P Sbjct: 253 ETMRWTSNLSPELLTGLFVRPDRMSAWQLYNYSKFL-SSNLQATDNIDLAFAKKIMYPFA 311 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 ++ M +I+ + RS + V G+ G + + + P +A +P Sbjct: 312 ILIMMMISLPFAYLHFRSGSVSVKVFAGVMIGVGFHLVNNLFSHLSMVASFPPFVSAALP 371 Query: 344 VILTISLSILILLQ 357 +L + + L Sbjct: 372 SLLGFVVGMGALWW 385 >gi|318041350|ref|ZP_07973306.1| permease [Synechococcus sp. CB0101] Length = 388 Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 103/360 (28%), Gaps = 19/360 (5%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 R+ L L+ + + + + + + R+P + Sbjct: 15 DRWLSSELLGPLLFGVAAFTAVSLSVGVVFELVRKVAEAGLPPLVAMQVLGLRLPGFLVL 74 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 P TL+ ++ F L+ +SEL R+IG+ W+++ P +V + L+ + T + + I Sbjct: 75 SFPMATLMATLLAFSRLSSSSELTALRSIGVPTWRMVVPALVVAALMTVLTFVFNDVIVP 134 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWM------------------QISNPQQDIFIGAK 167 S D + + + Sbjct: 135 SANLAAADTLDAALGRSVAAERGDNVVYSRYAQLTSIDEKGRERTGNDLAQLFYSRRFRE 194 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT 227 + E + + + + ++ ++ + D + Sbjct: 195 GKMYEVTLLDFTKAGHQQLLIAKTGIWNDARSMWEFRAGRIVDIDSANNRTTSADFDRYF 254 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVA 286 K A + + + + ++ R + P + + Sbjct: 255 YPFTKAPLDVGKLPSDAAQMTVAQAWRAEALLEQAGDRKEARRLRVRIQEKFAFPAICLV 314 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 LI +S+ + + + F Y + I S G G LLP AA +PV + Sbjct: 315 FGLIGSSLGVRPNARTSRSQGFGISVLLIFGYYLMSFIFSSLGIKGTLLPFFAAWMPVFI 374 >gi|162146455|ref|YP_001600914.1| hypothetical protein GDI_0631 [Gluconacetobacter diazotrophicus PAl 5] gi|209543542|ref|YP_002275771.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785030|emb|CAP54574.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531219|gb|ACI51156.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 357 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 117/362 (32%), Gaps = 8/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 RY L+ L LG L +++ + +G+ +Y ++ A A P Sbjct: 1 MKRFDRYIQMVTLRAFLLVALGLTALFSLLEFVDQLAFVGQ-GHYRLADAAAYTALLGPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q+ P L+ ++ L + SEL + IG+S ++++ + + + + L+ Sbjct: 60 RFMQVTPIAMLLACLLGLGGLAKHSELTALQGIGLSEARIISAVLRLVVPIVMVLFLLAQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + + ++ + ++ ++ E + Sbjct: 120 FVVPGTRQMAQEGRAAALASATQKDDQDQAF---WAHGDQQYLSVRRFPSETQADDIDIY 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQ 238 + + A I +D L+ V +S + + + Sbjct: 177 RFAADGSMTSYLHAARAQIGADDVWTLRDVTRKDIVADQFHTSQLDSMAWHAFLSSRQIR 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S S + + + + R E + + I +P ++A+ AA Sbjct: 237 FLSLPPESVPPIALYRYIQDLK-RHHLPAMRYEQELWARISMPFAMIALIACAAPFVFGP 295 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS +A G+ + I G L P AL P +L + + + + Sbjct: 296 PRSQNVGYRMAIGVAIAIVFSLGQEITSRLGLLFDLNPALTALTPSVLLMMSAAYVFIHT 355 Query: 359 ED 360 + Sbjct: 356 RE 357 >gi|88808511|ref|ZP_01124021.1| possible permease [Synechococcus sp. WH 7805] gi|88787499|gb|EAR18656.1| possible permease [Synechococcus sp. WH 7805] Length = 388 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 115/366 (31%), Gaps = 14/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ L L+ + ++ + + + + + R+P + Sbjct: 18 LLDRWLLGELLGPLLFAVAAFTVVSLSVGVMFELVRQIVESGLPVGIAVQVLLQRLPSFL 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ +++ + L+ SEL R++G++ +++ P ++ ++++ T + + + Sbjct: 78 VISFPMATLMASLLAYSRLSANSELTALRSVGVTATRMIVPALILALVMSGLTFIFNDAL 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI---------FIGAKKILPENH 174 + + + + Q+ + + + Sbjct: 138 VPRANRSAETTLARALGKAIATEKGTNIVYSRFGRLQETDGTSNKGLAQLFYARKFRDGV 197 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNI 230 + E + D + K + D + + Sbjct: 198 MNEVTVLDFTRAGFTQMLVADRAVWNESQAKWQFFDGQILTLTPSGSTTSADFDQYLYPL 257 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLMLVAMTL 289 K + + + E ++ ++ R E + +P+ + L Sbjct: 258 SAAPIRIAKLPKDANNMTVVEALQAKDLLQQAGDIKEARRLEVRIQEKFTLPMACLVFGL 317 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 I AS+ + + + + Y + S G G L P+ AA PV+++++ Sbjct: 318 IGASLGAKPNNRTSRSQGFGISVVLILVYYVLSFSFSSLGVKGTLPPLLAAWSPVLISLA 377 Query: 350 LSILIL 355 +L Sbjct: 378 GGGFLL 383 >gi|300703336|ref|YP_003744938.1| permease [Ralstonia solanacearum CFBP2957] gi|299070999|emb|CBJ42308.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CFBP2957] Length = 401 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 52/402 (12%), Positives = 112/402 (27%), Gaps = 46/402 (11%) Query: 1 MPGIL-----WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLA 55 M +L +YF + ++ L + L D+ + Y+ Sbjct: 1 MMKMLKMPVYEKYFARQIYGVFVFILFAVLALFIFFDMLSELGSVVGR--YTTLIAFFHV 58 Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 + P + ++IP L+ I VF + SE I R G+ L ++ L + Sbjct: 59 MLQAPTRVYEVIPVAALISAIYVFSQMASQSEFTIFRVAGLDTRGALLSLFKIALPLALV 118 Query: 116 TVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP--------QQDIFIGAK 167 T + I E+ + + + W++ P + F+ Sbjct: 119 TYVFGEFIGPKSEQFAQKVRLEALGATVSAEFRSGVWVKDRGPARPDGSGGEVTRFVNVG 178 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY------------- 214 + P+ I R + +L V E Sbjct: 179 SLQPDQTIRSLRIYEFDADYRLSSIRVAQQARYQGHQSWELDDVTETHFVEFPRKAGAAM 238 Query: 215 -----------------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + + + ++ + + Sbjct: 239 PQDNRQAVPGAPDALAPDFRGEQTKLPKQEMRSELTPQILSVLMVTPERMATLDLFQYIR 298 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 N R E + +V P ++ M +A + +R+ + V GI G Sbjct: 299 HLRD-NKQDTQRYEIALWKKVVYPFTVLVMMALALPFAYLHARAGAVGLKVFGGIMLGLS 357 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + G + A++P L ++++++ L E Sbjct: 358 FQLVNNLFSHVGLLNTWPAIFTAIVPGALYLAVALIALRWVE 399 >gi|329954892|ref|ZP_08295909.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] gi|328526996|gb|EGF54007.1| permease, YjgP/YjgQ family [Bacteroides clarus YIT 12056] Length = 380 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 118/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 23 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWKAIIFDYYMNFIPYF 82 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ I T + + Sbjct: 83 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAITTFCLGSY 142 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + I S I D Sbjct: 143 VIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFKD 202 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ KVK + E R I K + ++ F Sbjct: 203 KQLVSHLTARSITYDTAAVHKWKVKDYMIREMDGMRESIVKGERLDTILFMEPADFLIMK 262 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + + + E +++ I + +TLI S+S + ++ Sbjct: 263 NQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTKG 322 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + PV A IP +L ++ + Sbjct: 323 GMGLHLGIG-LGLSFSYILFQTIASTFAVNGNVPPVIAVWIPNLLYAFIAFYL 374 >gi|78356992|ref|YP_388441.1| permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219397|gb|ABB38746.1| permease, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 359 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 125/357 (35%), Gaps = 6/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + L T+ L + + DL + + + A ++PL Sbjct: 1 MSILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLG-AGLGLKVILTYFAVKIPL 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II QI+P + L+ ++ + R ELV +A GIS +L F++ +++ + Sbjct: 60 IISQILPAVFLLSAVIQLCVMARDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + GE+ + ++ N + + W + + I Sbjct: 120 VLGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIHLETLHPAAQKGSGITVYEL 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ++I K ++ Y + + +K Sbjct: 180 TPDELSVQRVIRGKSFRADSSGWTLDGCDILIPGSYEVATSESIVLPIEQDVKAFSIVDP 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + +++ ++ +S + T ++ + LV M L+A ++ + Sbjct: 240 RGDPSRLPLWQLQDAIARLTESGS-NVEALRTAWHMKLSYAFSLVTMALLALALI---TW 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I V + F+ YT+ T+ S G++GI+ P+ AA +I L+ Sbjct: 296 RDSIYINVGTSLLLVFVFYTLFTVGGSLGENGIVPPLFAAWTANAFFSLSAIARLIY 352 >gi|126696921|ref|YP_001091807.1| putative permease [Prochlorococcus marinus str. MIT 9301] gi|126543964|gb|ABO18206.1| possible permease [Prochlorococcus marinus str. MIT 9301] Length = 401 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 45/373 (12%), Positives = 117/373 (31%), Gaps = 19/373 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ + ++ + ++ + + + + + +P + Sbjct: 25 LIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLALKVLFFSLPSFL 84 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ +++GI ++++P + SI + T + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNL 144 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + K+ ++ + + M + K + F + Sbjct: 145 VPASNKLAEKTLRAGIGSSFSAEQRKDNIMFSRYGSRISSSNKKPTKTNTFLTHIFYASW 204 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI------------------DKNS 225 + + +K K V + I Sbjct: 205 YENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSSWIFSDGNIVSIDPSGQTTNIQFQE 264 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLML 284 T K + + + I+ K+ R + + +P Sbjct: 265 YTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEKTGNLKEIRRIKVRIQEKFTLPFAC 324 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + LI +S+ + + + + + Y + + SFG GIL P+ AA +PV Sbjct: 325 LVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFLFSSFGVKGILPPIFAAWLPV 384 Query: 345 ILTISLSILILLQ 357 ++++ I +L + Sbjct: 385 LISLGGGIYLLRR 397 >gi|300727713|ref|ZP_07061099.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] gi|299775001|gb|EFI71607.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] Length = 409 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 114/354 (32%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K ++ T + ++ + + V+D+NE + E + A +P Sbjct: 50 KRLDWYIIKKFIGTYFFSIILIISISIVVDINENLAKFTEYHAPLKAIVFDYYANFIPYF 109 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + I L SE++ A G+S +L+ P+++ +L+ + + Sbjct: 110 ANLFSALFVFIAVIFFTSKLAGNSEVIAILAAGVSFKRLMRPYMISCVLISMLNYYLSAY 169 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G + + +K+ +D + I ++ D Sbjct: 170 VIPHGNVVRQNFESLYKNKKKITSADNVMLQIDKGVIVYIQHYDDRLKKGFGFSLDKFEN 229 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQK 239 + D ++ E + N + ++ Sbjct: 230 KKLVDHMTAMEIQYDTISDSKYHWRMSNWKERHLRGLREHITNGNQKDTTLYMEPTDLVY 289 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + ++ + +S + + E +++ I +T+I S+S Sbjct: 290 SKGQQETFTSPQLKEYISKQKNRGSGNVVQYEVEYHKRIASSFASFILTIIGLSLSSR-K 348 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F P+ AA IP ++ +++ Sbjct: 349 RKGGMGMYLGVGLALSFAYIMLQTVSSTFAIQADAPPMLAAWIPNMIFAIIALF 402 >gi|330751983|emb|CBL80496.1| predicted permease YjgP/YjgQ [uncultured Polaribacter sp.] Length = 363 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 130/361 (36%), Gaps = 6/361 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAV-LAATRVP 60 I+ Y K +L T L+ LL + + ID++E + E PN ++ + Sbjct: 1 MKIIDWYILKRFLVTFLFTLLILIPIAIAIDVSEKIDNFLEHPNLGLNEVLNDYYLNFII 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +P + I+ L+ +E++ +S + + P+ +G+ L+ I ++ + Sbjct: 61 YYTNTFMPLALFIAVILFTSKLSNNTEIIAITNAKVSFTRFMYPYFIGATLITILSLGMN 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + K+ +++ +N ++ + +I + EN++ DF Sbjct: 121 HYVVPNSSKVRKAFEKKYINNSKQKNALKYVSDFSLQLTDSTYIFIRSFNTENNVGNDFN 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDG 236 S T + I L+ D + + D + Sbjct: 181 SETYNGLELISKLSADRLSYNNKDSIFTLNRWRKRLVYKDRDSIFSGSKMDTVFNFAPKD 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S E++ ++ S K + + + Y +P+ +T+IA +++ Sbjct: 241 LIYKSAFAQEMPSNELVAFINISKKRGVKNLNAYLVELYKRSSLPIASYILTIIAVALAF 300 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + +A G+ F+ + + + G + +A IP IL ++I + Sbjct: 301 R-KRRGGTGVNLAVGVGIMFLYVFFMKVGEVLGSVAGVNSLAYVWIPNILFGLIAIYLYF 359 Query: 357 Q 357 Sbjct: 360 H 360 >gi|332829399|gb|EGK02053.1| hypothetical protein HMPREF9455_00175 [Dysgonomonas gadei ATCC BAA-286] Length = 365 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 117/356 (32%), Gaps = 7/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K +L T ++ ++ + + V D+NE ++ + + VP Sbjct: 6 ILDRYIIKKFLGTYIFSIILIISIAVVFDINEKLDKFLDKKAPLTAIIFDYYVNFVPYYT 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I L SE++ + G+S +L+ P+++ + ++ +F+ ++ + I Sbjct: 66 NLFSALFVFIAVIFFTSKLADNSEIIAMLSNGMSFKRLMKPYMISAGIIAVFSFVLSSFI 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 I ++ + + + I I K ++ D Sbjct: 126 IPPANVTRIKFQNKYVRDKSVEYASGIQLQVDKGVILYIERFDNKTKEGYNLSLDKIEDK 185 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K R D A + + + + + + + F Sbjct: 186 ELKSRLTAQRIKYDSAYHWELYNYKIR-ELQGMREVISNGDKIDTTLNVVPSDFLISVND 244 Query: 244 FASRSFYEIIKKMSFSNKS-----NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 F + + K + + E +F+ +T+I AS+S Sbjct: 245 FEQMTTPVLYKYIQRQRDKGIATVGDVSITQFEIEFHKRFASVFSAFILTIIGASLSARK 304 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + G+ T+ SF SG + A IP ++ ++++ + Sbjct: 305 VK-GGMGLNIGIGLGLSVSYIMFQTVSSSFAVSGTMPAWLAVWIPNLVFMAIAAYL 359 >gi|284929068|ref|YP_003421590.1| putative permease [cyanobacterium UCYN-A] gi|284809527|gb|ADB95232.1| predicted permease [cyanobacterium UCYN-A] Length = 402 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 43/369 (11%), Positives = 116/369 (31%), Gaps = 16/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY + + + IL I + + + + + ++P Sbjct: 31 LIDRYILSQLIGPLAFSVGLVSILGVAIGYLSDLSNKVVESDLPLIQALEIIFLKIPEFT 90 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P ++ ++ + L+ SEL+ R G S+++L+ P + S+++ T + I Sbjct: 91 AYALPISMMLSTLLTYGRLSGDSELIALRVCGASLYRLVMPAFIISLIMTGITFIFSELI 150 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN---------PQQDIFIGAKKILPENH 174 + ++ + + + +Q + + Sbjct: 151 VPAANYRVTSILVEHLQEERPYWQNKDIFYPDYEKVVLPDGSTEKQLKHLFFAEKFDGQK 210 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + ++KK I D+ ++ YQ + + + Sbjct: 211 LETLTVLEWLEKKLNRIVVSDSAAWNAQDETWDFFNGTIYQLAPDSSYQGTYSFKHRQLP 270 Query: 235 -----DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLVAMT 288 F + + ++ K M R + + I P + + Sbjct: 271 LAKSAFEFIQEGRDPYEMNIFQAQKYMKILRVMEDEQKLRTFQVRVQQKIAFPFICIVFG 330 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 +I +++ + + F+ Y + ++ S G G++ P AA +P + + Sbjct: 331 VIGSALGTSPQYI-NRAMGFGLSVVIVFIYYLLGFLIGSLGLIGVVSPFMAAWLPNAIGL 389 Query: 349 SLSILILLQ 357 + + +L Sbjct: 390 GIGLYLLYW 398 >gi|281424311|ref|ZP_06255224.1| putative membrane protein [Prevotella oris F0302] gi|281401580|gb|EFB32411.1| putative membrane protein [Prevotella oris F0302] Length = 432 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 112/354 (31%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K ++ T +Y + + + V+D+NE + E + +P Sbjct: 73 KRLDWYIIKKFIGTYIYSIALIISISIVVDINENLAKFSEYHAPLKAIVFDYYMNFIPYF 132 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ IL+ + + Sbjct: 133 ANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMITCILISAVSFYLSGY 192 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + I D +K+N +D + S I D Sbjct: 193 VIPHSNVIRQDFESLYKNNKKNTAADNVMLQVGSGVIAYIQQYDNNTKRGYGFSLDKFQD 252 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D ++ + I ++ Sbjct: 253 KKLVSHMTATEIQYDTISDSKYHWTALNYKIRKFNGYREQIENGEKKDTTIMMEPTDLVY 312 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + + +++ I +T+I S+S + Sbjct: 313 SKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILTIIGLSLSAK-K 371 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + L PV AA IP ++ ++ Sbjct: 372 RKGGMGLYLGIGLALSFGYIMLQTVSSTFAINANLPPVIAAWIPNLIFAVVAYF 425 >gi|187922983|ref|YP_001894625.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|296162275|ref|ZP_06845069.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] gi|187714177|gb|ACD15401.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|295887429|gb|EFG67253.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] Length = 382 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 113/378 (29%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L + T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVLLTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS------------------------N 157 + +++ + + + + W++ + Sbjct: 120 VVGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGELKPDATI 179 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K N ++ D L + + Y Sbjct: 180 SNVRIYEFDSKFRLSNVRTAKSGKYQPPGHWQLTGVTDTQLIDVPPPPGTPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + N R E + Sbjct: 240 AKEVAVPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHL-TENHQDTQRYEIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPGLVYLVLGLVGL 376 >gi|159903539|ref|YP_001550883.1| putative permease [Prochlorococcus marinus str. MIT 9211] gi|159888715|gb|ABX08929.1| Predicted permease [Prochlorococcus marinus str. MIT 9211] Length = 401 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 112/367 (30%), Gaps = 15/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ + L+ + ++ + + + + + R+P + Sbjct: 31 LLDRWLLGELIPPLLFAISAFTVVSLSVGVMFDLVRQIVESGLPFNIAIQVFLLRIPGFL 90 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL R++G+S +++ P + ++L+ T + N I Sbjct: 91 VLSFPMAMLMATLLAYSRLSSNSELKALRSLGVSTKRMIAPAMALALLITSITFIFNNSI 150 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWM----------QISNPQQDIFIGAKKILPEN 173 + ++Q + + + + +N Sbjct: 151 VPISNRNSEYILQNSLGKAISNQIGEDIIFSRKGRIDGLKDEKKRKSLTHLFYAGKIDKN 210 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLN 229 I + K + + L + S + Sbjct: 211 KISKLTLLDFSKKGYTQMIVANKALWNESKGIWDFIDGMMLTLSPTGNTTTTKFQSYSYP 270 Query: 230 IPIKMDGFQKFSEQFASRSFYE-IIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMT 288 + + + E + + + NI R + +P+ + Sbjct: 271 LGTGPIKIGSIPKDANDMTVSEALKAEQLYLKSGNIKEARRMRVRIQEKFTLPMACIVFG 330 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI +++ + S + +F + Y + S G SG L P AA PV L++ Sbjct: 331 LIGSTLGAKPSTTTSRSQGFGVSVFLILIYYVLSFSFSSLGVSGALTPFFAAWTPVFLSL 390 Query: 349 SLSILIL 355 + +L Sbjct: 391 AGGAFLL 397 >gi|91782194|ref|YP_557400.1| membrane protein, YjgP/YjgQ like [Burkholderia xenovorans LB400] gi|91686148|gb|ABE29348.1| membrane protein, YjgP/YjgQ like protein [Burkholderia xenovorans LB400] Length = 382 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 113/378 (29%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L + T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQSLRSLLKIGIPLVLLTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS------------------------N 157 + +++ + + + + W++ + Sbjct: 120 VVGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGELKPDATI 179 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K N ++ D L + + Y Sbjct: 180 SNVRIYEFDSKFRLSNVRTAKSGKYQPPGHWQLTGVTDTQLIDVPPPPGTPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + N R E + Sbjct: 240 AKEVAVPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHL-TENHQDTQRYEIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPGLVYLVLGLVGL 376 >gi|255536554|ref|YP_003096925.1| hypothetical protein FIC_02430 [Flavobacteriaceae bacterium 3519-10] gi|255342750|gb|ACU08863.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 364 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 123/362 (33%), Gaps = 6/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ + K YL T + L ++V +ID+ ++ + Sbjct: 1 MKIIDLHIIKKYLGTFAFMLGLLTLIVLIIDVQAKAPRIESNGFSVTEFLINFYPYWIVN 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I + + + I + +E+V + G S + P+++ S + +L+ + Sbjct: 61 LIITFMSILVFISVIFFTSRMANNTEIVAIISSGASFHRFARPYLITSSFIAAIALLLNH 120 Query: 122 PIATSGEKIGIDLI-QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +L + ++ + + IFI + + Sbjct: 121 FVLPLANVKKNELEPYTYTAKSREEYIGNTEVSTQLSKSEYIFIKSYNRKERRGSGFMYQ 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDG 236 ++K + L +E + +K ++ T + + Sbjct: 181 KFDKNRKLTYQIIANEFSWDDKKSHFILNSYLEKTVRKDETEKLGSGDTMTKSFGHPPEE 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 +++ ++I + + + + + + +P+ ++ +T + S++ Sbjct: 241 LFPGVLLGQNKTTPDLIGFIDREKEKGNANLGNYQNELHQRTSMPVSVIILTFLGLSLAS 300 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R + +A GI F+ +K K+ L P+ A +P ++ +++ + L Sbjct: 301 QKKR-GGLGMNLAIGISLAFVFVFSFEALKVVSKNQSLPPLLAMWLPNLIFGPVALYLYL 359 Query: 357 QK 358 ++ Sbjct: 360 KR 361 >gi|239815706|ref|YP_002944616.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] gi|239802283|gb|ACS19350.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] Length = 369 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 123/372 (33%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPN--YSISRGAVLAATRV 59 + R + LK + LG + L F D + +G + Y ++ + + Sbjct: 1 MKTIRRLIYVEALKAVAFVTLGFLSLFFFFDFVDELQSIGRPESLAYGPAQALIYVTLLI 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +++P L+ I V L ++SE I R G+ W+ L ++ + T + Sbjct: 61 PSHLYELLPITVLIGCIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGVGFVFLTFAI 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + IA + E+ L++ + W++ + I + ++ Sbjct: 121 GDYIAPASERT-GQLLKSRYQGSYSLVGNTGAWLKEKRENVSYAVNVLSIARDGS-LKNA 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---------STTLNI 230 D + + A A I++D +L V Y + Sbjct: 179 RIFEFDANGYVRKQLVASSARIFDDHWQLSDVELQDYETRISAEKARIVTTKVPQLDWPT 238 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 + + + ++ + + R E QF+ + PL + M ++ Sbjct: 239 TLTSEMVSVALLRPDRMGTLDLFDYIRHLEANGQ-TAQRYEIQFWRKVFYPLSCLVMVVL 297 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A + R V G+ G + + + G P A P ++ + Sbjct: 298 ALPFAYLHFRQAGITTYVFGGVMIGISFFLLNNVFGYLGNLSNWSPWLTAAAPGLIYSVM 357 Query: 351 SI----LILLQK 358 S+ ++L++ Sbjct: 358 SLAAFSWLVLRR 369 >gi|264678997|ref|YP_003278904.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] gi|262209510|gb|ACY33608.1| permease YjgP/YjgQ [Comamonas testosteroni CNB-2] Length = 367 Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 123/370 (33%), Gaps = 16/370 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMG-ELPNYSISRGAVLAATRVP 60 +L ++ ++ LY L + L F DL + +G Y+ +R + A +P Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVALSIP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ I V ++SE I R G+ W L ++ + + TVLV Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLILGMSFVLLTVLVG 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + IA + + L G + W++ + I + Sbjct: 121 DYIAPAADNFSQKLR--VVSKGQISRGATGAWLKEKQGDHSVAINVGAVKSPGDFVNVRI 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID--------KNSTTLNIPI 232 K + + + + V+ D + S + Sbjct: 179 FEFDSKGRIAAQINAQSAQVDEDREQWTLQGVQGSKVAQDGDVTKLSPISEASMNWPTKV 238 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + + + + + + + E +F+ + PL + M ++A Sbjct: 239 TAAMVSGALLKPDRMTTIALFQFIRHLQDNGQA-AQKYEIEFWRKVFYPLSCLVMVVLAL 297 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + RS V G+ +G + + + G P AA P +L +LS+ Sbjct: 298 PFAYLHFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTALSL 357 Query: 353 ----LILLQK 358 ++L++ Sbjct: 358 SAFGWLVLRR 367 >gi|153806356|ref|ZP_01959024.1| hypothetical protein BACCAC_00617 [Bacteroides caccae ATCC 43185] gi|149131033|gb|EDM22239.1| hypothetical protein BACCAC_00617 [Bacteroides caccae ATCC 43185] Length = 365 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 121/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE +++ E +P Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWSKIIFEYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T ++ + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFMLSSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + + + S I + N D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNTARNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D A ++ + V E + I K + I ++ F Sbjct: 188 KKLVSHLTARRITYDTATVHKWTIHDYMVRELDGLKEKITKGDKIDSIINMEPSDFLIMK 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPQLSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + PV A IP IL ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTITSTFAINGNVPPVIAVWIPNILYAGIAFFL 359 >gi|116070679|ref|ZP_01467948.1| possible permease [Synechococcus sp. BL107] gi|116066084|gb|EAU71841.1| possible permease [Synechococcus sp. BL107] Length = 384 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 106/370 (28%), Gaps = 17/370 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L ++ L+ + +L I + + + I L +P + Sbjct: 14 LLDQWLLAEIAAPLLFAIASFTVLGLSIGVMFELAR-RLVDGLPILVALQLLLLNIPSFL 72 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P TL ++ + L+ SEL R++G+S +L+ P + SI L T + + I Sbjct: 73 VLSLPMATLFATLLAYSKLSSNSELTALRSLGVSTTRLVVPALALSIFLTGLTFVFNDVI 132 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD----------IFIGAKKILPEN 173 +Q+ + D + + + Sbjct: 133 VPRANTQAEITLQKGLGRALATEKGKDITFNSFGKIYDPKTETSSRGLRQLFYARRFEQG 192 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLN 229 + + + + + + + + Sbjct: 193 EMLDVTLLDFSRADYRQMWIAERAVYNEAKAMWEFFNGQVLTLNPNGSTTRLAFDENFYP 252 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 + K + + + I + + R + P+ + Sbjct: 253 LSSGPLQVAKLPDDANDMTLSQAISAEKIESDAGNIKAARKLRVRIQEKFSFPMACIVFG 312 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI +S+ I Y + S G SGIL P AA +PV++++ Sbjct: 313 LIGSSLGARPGSRTSRSQGFGVSILLILGYYALSVSFSSLGVSGILPPFFAAWLPVLISL 372 Query: 349 SLSILILLQK 358 +LL++ Sbjct: 373 GAG-GLLLRQ 381 >gi|114569776|ref|YP_756456.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] gi|114340238|gb|ABI65518.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] Length = 365 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 80/363 (22%), Positives = 156/363 (42%), Gaps = 5/363 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G L RY L L ++ ++D E +G + S L R P + Sbjct: 4 GRLNRYMASQTAGGLLLAFLTIATVIILVDFVEQSRAVGTRVDVSTLDLLGLTLLRAPAL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 ++ +PF+ L + F LNR+SEL++ RA GIS W++L +V ++ +GI +NP Sbjct: 64 LESTLPFVFLFGTLTSLFRLNRSSELIVMRASGISAWRILTAPMVLAVGIGIIGATGLNP 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 +A + + + ++ W++ +N I A ++ + + + Sbjct: 124 LAATLNAEFEARRDSLMNVRRVEGAEQPVWLRETNIDGFTVIAATQLEEARQVLRNPVFL 183 Query: 183 TIDKK----NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + ++ R DA+ A + ++ +E +D + + I Sbjct: 184 QFAEDASGTPRLERRIDAESAELRAGFWEVTGAIERTPTPSRLDLGAIAMPTSINRQALF 243 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + +F+++ + ++ + ++ R E + + L+ +PL L+A TLIAA+ +L Sbjct: 244 ERARSAEGVAFWDLPRLITSAREAG-LATQRYELRLHALLALPLTLLASTLIAAAATLRL 302 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R G +GF+++ ++ SFG SG L P AA LT L+++ + Sbjct: 303 HRLGGAAAFAMAGGIAGFVMFFFQEMLSSFGVSGALPPATAAWSAPALTALLALIYIAST 362 Query: 359 EDG 361 EDG Sbjct: 363 EDG 365 >gi|160902798|ref|YP_001568379.1| permease YjgP/YjgQ family protein [Petrotoga mobilis SJ95] gi|160360442|gb|ABX32056.1| permease YjgP/YjgQ family protein [Petrotoga mobilis SJ95] Length = 1153 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 132/356 (37%), Gaps = 4/356 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L++Y K ++ L+ ++ V + +L +++ N S+ +L +P Sbjct: 1 MKK-LFKYVSKEFIPPFFMGLIAFIVFVSL-ELLYQLSEIIVRNNVGFSKLLILIWYHLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I IP L V L+ +E++ + +GI + +L+ PF+ S+LL FT + Sbjct: 59 YFISMGIPVGVLFGIFWVISKLSSANEIIALQTLGIPMKKLIIPFMTISLLLSFFTFALF 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N I + + + + + + ++ + + + + + + Sbjct: 119 NTIVPVSNYKAKEAMALYVYQRPQAQIEENQFVDVGDGRYLFVKQIDRESGILYDVLLYE 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + Y ++ + E + + I + L+I ++ F F Sbjct: 179 VKNDYTAVFNAQQAQKGPDGWYMKNGRMFRTNEDGFLDLDITFDQLQLDIQEDVEEFLNF 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S+ + E+ +K++ +K + L + + ++ ++SL + Sbjct: 239 SKSANEMTSKELKEKITTFSKLG-LDVSGLIVSYQSKFANSLAPLVICILGIALSLFLNL 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +++ ++ + + + + GK I+ P + IP I+ + + L Sbjct: 298 TSKSWSVITTFVLV-IIYQGSGAWLSALGKEHIINPTISVWIPNIIFGIIGTFLFL 352 >gi|167763060|ref|ZP_02435187.1| hypothetical protein BACSTE_01426 [Bacteroides stercoris ATCC 43183] gi|167699400|gb|EDS15979.1| hypothetical protein BACSTE_01426 [Bacteroides stercoris ATCC 43183] Length = 380 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 118/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 23 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWQAIIFDYYMNFIPYF 82 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ I T + + Sbjct: 83 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAITTFCLGSY 142 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + I S I D Sbjct: 143 VIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFKD 202 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ KVK + E R I K + ++ F Sbjct: 203 KQLVSHLTARSITYDTAAVHKWKVKDYMIREMDGMRESIVKGERLDTILFMEPADFLIMK 262 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + + + E +++ I + +TLI S+S + ++ Sbjct: 263 NQQEMLTSPQLSEYIDRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTKG 322 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + PV A IP +L ++ + Sbjct: 323 GMGLHLGIG-LGLSFSYILFQTIASTFAVNGNVPPVIAVWIPNLLYAFIAFYL 374 >gi|254527024|ref|ZP_05139076.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] gi|221538448|gb|EEE40901.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. MIT 9202] Length = 401 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 45/374 (12%), Positives = 114/374 (30%), Gaps = 21/374 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ + ++ + ++ + + + + + +P + Sbjct: 25 LIDRWLLGQIIPPMVFAISAFTVISLSVGVMFDLIRKIVEYGLPLFLALKVLFFSLPSFL 84 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ +++GI +++ P + SI + T + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIIAPAIALSIFMTGLTFYFNDNL 144 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN-------------------PQQDIFI 164 K+ ++ + ++ M Sbjct: 145 VPKSNKLAEATLRAGIGSSFSEEEGKENIMFSRYGSRINASTKKPTKNNSKLTHIFYAQW 204 Query: 165 GAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 K++ + + R D + K + + I Sbjct: 205 YKNKLMENVTLLDFSREDLQQILKADSARFDKKNSSWIFSKGSIVSITP-SGQTTNIKFK 263 Query: 225 STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLM 283 T K + + + I+ K+ R + + +P Sbjct: 264 EYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYKKTGNIKEVRRIKVRIQEKFTLPFA 323 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + LI +S+ + + + + + Y + I SFG GIL V AA +P Sbjct: 324 CLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFIFSSFGVKGILPAVFAAWLP 383 Query: 344 VILTISLSILILLQ 357 V++++ I +L + Sbjct: 384 VLISLGGGIYLLRK 397 >gi|89891008|ref|ZP_01202516.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] gi|89516652|gb|EAS19311.1| putative permease, YjgP/YjgQ family [Flavobacteria bacterium BBFL7] Length = 357 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 122/356 (34%), Gaps = 5/356 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY + YL L L + ++ + + E ++ + + + Sbjct: 1 MLKILDRYILRQYLGAFLLLLCLFIPIMITVHIAEKIGKILSK-DIPFTEVMMYLLDFTI 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P + + L +E+V + G+S + L P+++G++L+ + ++ Sbjct: 60 YFSNFLFPIFLFISTMFFTSKLANNTEIVAFLSSGVSYNRFLRPYIIGAVLVCVTALVFS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ + +++++ + + + +++ + Sbjct: 120 TVFVPDAAAGFNEFQFKYFKSEKERQTNNV--FRRISDDDYVYVSNYNSGRKTGYDFTLE 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ I+ + + KK V + G I K + +D Sbjct: 178 HFNGNELEYKIYAERIAFKDSVYTLSRYKKRVLQENGEILTTKAKLDTILNFDIDELTPS 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S+ +++ + + + + IP+ + T+IA +VS R Sbjct: 238 SYVAETLSYQKLLDFIETEESRGNGNMNVYYVEKHKRTSIPVSALIFTIIAVAVSSVKKR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSILIL 355 + +A G+ + + + + P A P I +++L++ Sbjct: 298 -GGMGVNLAIGLGIAMSYMFLDKVFGTIAEKSTSFEPWIAVWAPNIFFGIVALLLI 352 >gi|170692023|ref|ZP_02883187.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] gi|170143307|gb|EDT11471.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] Length = 382 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 111/378 (29%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYERYFARQVYLTFIFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS------------------------N 157 + +++ + + + W++ + Sbjct: 120 VVGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARADGEQVTRFVNVGELKPDATI 179 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K N ++ D L + + Y Sbjct: 180 SNVRIYEFDSKFRLSNVRIAKSGVYQPPGHWQLTGVTDTQLIDVPPPSGTPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + N R E + Sbjct: 240 ARQVALPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHL-TENHQDTQRYEIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 VLYPFAVFVMLVLSLPFAYLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPGLVYLVLGLVGL 376 >gi|293603258|ref|ZP_06685689.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292818347|gb|EFF77397.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 372 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 116/355 (32%), Gaps = 20/355 (5%) Query: 22 LGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFN 81 + + L L + + +G+ +S+ + A +P + ++P L+ I+ Sbjct: 1 MALLGLFTFFALVDDLDNVGDK--FSMMALLYMQALAIPTRLYDLLPIGLLIGAILALAG 58 Query: 82 LNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDN 141 L + +ELVI R G+S +LL V +I L I L+ + E + ++ Sbjct: 59 LAQRNELVILRVSGVSGMRLLRMLWVVTIPLMIGAALLSEYVTPWAEIKSGEANLMFRGK 118 Query: 142 GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAII 201 + W + + I L + T K + A + Sbjct: 119 AGGDRLKSGYWFKEPTANGGMRIINIAELKGDGQVAGITLYEFKKDQTLTVLSTAPTGLF 178 Query: 202 YNDKVKLKKVVEYQ-----------------YGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + LK V E + + T++ + + Sbjct: 179 SHGDLVLKDVSETRLDNDAADALANARQPKNPPASVVKVPERTIDTTLSAERLLARVLTP 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S ++ + + N R + + P L+ M IAA + L +R Sbjct: 239 ERMSIVTLLDYVEYLRD-NQLQYGRQVVALWRKLAYPFTLLVMITIAAPIGLMQTRRGGV 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 V GI G + + + + G G AL P I ++L++ + E Sbjct: 298 GAKVFIGILLGVGFFMLNQLALNVGMLGKWPSWLTALGPNIGAMALALGAMSYME 352 >gi|218131075|ref|ZP_03459879.1| hypothetical protein BACEGG_02679 [Bacteroides eggerthii DSM 20697] gi|217986779|gb|EEC53112.1| hypothetical protein BACEGG_02679 [Bacteroides eggerthii DSM 20697] Length = 380 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 117/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ + +P Sbjct: 23 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDRFMSHEAPWEAIIFDYYMNFIPYF 82 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P++V + ++ + T + + Sbjct: 83 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMVSAAIIAVTTFCLGSY 142 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + I S I D Sbjct: 143 VIPKGSVTRLNFEDKYYKPRKSTTARNIQLEVDSGVIAYIERFEDYSKTGYRFSLDKFKD 202 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D A ++ VK + E R I K + ++ F Sbjct: 203 KQLVSHLTARSITYDTATVHKWTVKDYMIREMDGMRESIVKGEKMDTILFMEPADFLIMK 262 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + ++ + + E +++ I + +TLI S+S + ++ Sbjct: 263 NQQEMLTSPQLSEYINRQRQRGFANIKEFEIEYHKRIAMSFASFILTLIGVSLSSKKTKG 322 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + P A IP +L ++ + Sbjct: 323 GMGLHLGIG-LGLSFSYILFQTIASTFAVNGNVPPFIAVWIPNLLYAFIAFYL 374 >gi|332142603|ref|YP_004428341.1| permease YjgP/YjgQ [Alteromonas macleodii str. 'Deep ecotype'] gi|327552625|gb|AEA99343.1| permease YjgP/YjgQ [Alteromonas macleodii str. 'Deep ecotype'] Length = 366 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 116/356 (32%), Gaps = 9/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY K LK+ L M + + + + + P++ Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASD-GDIPAGLVLGFLGLYAPILS 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ L SE+ + RA GIS W + + S+L+ I T + Sbjct: 61 SLVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLFLSVLIMIVTGAITLYF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI--WEDFTS 181 A + L ++ ++ + Q N + IF+ + + Sbjct: 121 APLAAENEYQLREKARNEAGISALMPGRFQQTGNEKAVIFVHDVDKNDKLQRVFLSQNQT 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++++ + ++A + L QY I +K + Sbjct: 181 SDSEGDVRVVYAQTGEVASNPDGTRNLVLKQGVQYEGIQSEKAYRKVEFDEYQIQIADKP 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 R + + + A + + I IPL + + LIA +S R Sbjct: 241 ADETRRKVSVLPTS-----ELWEDDSIEARAELQWRIAIPLSIPFLILIAVPLSAVDPRQ 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + I + ++ + + G + P + + + I ++++ Sbjct: 296 GRFGK-MFPAILLYLGYFLLLLASRRVLEDGKMPPQLGLWWVHTIMLIIGITLIVR 350 >gi|299140954|ref|ZP_07034092.1| membrane protein [Prevotella oris C735] gi|298577920|gb|EFI49788.1| membrane protein [Prevotella oris C735] Length = 424 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 111/354 (31%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K ++ T +Y + + + V+D+NE + E + +P Sbjct: 65 KRLDWYIIKKFIGTYIYSIALIISISIVVDINENLAKFSEYHAPLKAIVFDYYMNFIPYF 124 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ IL+ + + Sbjct: 125 ANLFSPLFVFIAVIFFTSKLAGNSEIIAMLAAGVSFKRLMRPYMITCILISAVSFYLSGY 184 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + I D +K+N +D + S I D Sbjct: 185 VIPHSNVIRQDFESLYKNNKKNTAADNVMLQVGSGVIAYIQQYDNNTKRGYGFSLDKFQD 244 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D ++ + I ++ Sbjct: 245 KKLVSHMTATEIQYDTISDSKYHWTALNYKIRKFNGYREQIENGEKKDTTIMMEPTDLVY 304 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ +S + + + +++ I +T+I S+S + Sbjct: 305 SKGQQETFTNPELSDYISKQIDRGSSNVVQYQVEYHKRIAASFASFILTIIGLSLSAK-K 363 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F + L PV AA IP + ++ Sbjct: 364 RKGGMGLYLGIGLALSFGYIMLQTVSSTFAINANLPPVIAAWIPNFIFAVVAYF 417 >gi|89094619|ref|ZP_01167556.1| hypothetical protein MED92_00300 [Oceanospirillum sp. MED92] gi|89081089|gb|EAR60324.1| hypothetical protein MED92_00300 [Oceanospirillum sp. MED92] Length = 362 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 123/368 (33%), Gaps = 20/368 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY ++ L L LL L + L E + NYS + +P Sbjct: 1 MSLIDRYIARHVLGGFLVVLLVVAGLDMLFALVEELKDV--QGNYSFAAAVEYVLLTLPR 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + IP +L+ ++ L +SEL + RA GIS ++ + +L+ + + Sbjct: 59 RLYEFIPLSSLIGCLLGLGILASSSELTVMRAAGISTLGIIISVMKPVLLIIALALGLGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E+ Q G W + + + + T Sbjct: 119 FVVPHTEQRAQSHRQVMLTGGGAIHDASRVWHRDD-----MTFLHINAVIPDGSVRGVTR 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK------------NSTTLN 229 ++ + A++ + K L + E ++ + Sbjct: 174 YEFNEDLTLKRSSFAEVGRYEDGKWLLTDIQESRFPDAKGREQRATSSIVTTEIEQEIWE 233 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + D + Q + S +++ ++ + + F+ +++PL + A+ L Sbjct: 234 SGLTPDLLKVVMVQPTNLSISGLVQYSNYLTDQGLASE-QYRIAFWNKLLLPLAIFALVL 292 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 +A S RS + GI G + I+ P A +IP+++ I Sbjct: 293 VAVSFIFGPLRSVTLGQRLITGIIVGLVFKLSQDILGPTSAVFGFYPFVAVMIPILICIG 352 Query: 350 LSILILLQ 357 + +L + Sbjct: 353 VGFWLLNR 360 >gi|310778172|ref|YP_003966505.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] gi|309747495|gb|ADO82157.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] Length = 358 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 127/361 (35%), Gaps = 6/361 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I RY ++K+ + L G + + + L ++ + E + + +P Sbjct: 1 MKKI-DRYITMNFIKSIVLSLFGFINIFILSQLFKVIRYVTE-GRFGGVDAIYYIISLLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II +++P L+ ++ + + E++ + GIS +++ ++ + ++ + Sbjct: 59 DIIIKVMPLAVLLGGLMTINKMASSLEIIALKTSGISFKRIITFPILIAFIISCGVYYMN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + I K ++ + ++ + +S +++ + +I E Sbjct: 119 DKIYPESIKKSREIKRGGYEDMELPESRKKAFLRGKDNYVYYAESINRITSTAVNIEILE 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 + +K I + + N K + V + + + + F Sbjct: 179 LDSEFEKLTKIITAEKGIYHRENKLWKFENVTVNNLEKKSSYTLPVMQDVRYDDEPERFL 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + E+ + ++ ++ + ++ + S+ + Sbjct: 239 APSVNPKLLTIKEMRSTLGAIKQTGG-NSREILMELGDRTSFSFASFVVSFLGLSLGSRY 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + VA + G+ Y + M++ G++ P A IP IL + L I + + Sbjct: 298 VR-GASAVSVAMSVGLGYSYYIVQASMEAISMGGVIHPFIGAWIPNILFLILGIYAMYKA 356 Query: 359 E 359 E Sbjct: 357 E 357 >gi|145588806|ref|YP_001155403.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047212|gb|ABP33839.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 384 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 117/376 (31%), Gaps = 25/376 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I RY + + L + L D+ + Y+++ + + P Sbjct: 6 PYIYERYLARQIYAAFGFILFALVALFLFFDILSELGSV--QGQYTLALALLHVLLKAPS 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +IIP L+ +I VF L SE I R G+ + + L S+ L + T+++ Sbjct: 64 RISEIIPIAGLIGSIYVFAMLASQSEFTILRIAGLDVKRGLITLGKISLPLIVLTLVMSE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD---------IFIGAKKILPE 172 E + + + + W++ +D ++ K+ + Sbjct: 124 WAGPYTEAKSEQIRMKALGSSYSSQFKTGVWVKDRLRDEDGSGPVRPGVRYVNVGKVEKD 183 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---------- 222 N I + D N + R L V E ++ I Sbjct: 184 NEIRDIRMYEFNDVYNLLSIRSAVSGHFDETGIWVLNDVTETRFKEIKQTDPLNPVFSAQ 243 Query: 223 ---KNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 TL + S + + + + N R F+ +V Sbjct: 244 TLTHPILTLESEVTPQILSVLLISPEKMSILSLGRFIDHL-QENKQDVQRHSIAFWKKVV 302 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 P + M +A + R+ I V GI G ++ + G Sbjct: 303 YPFTIFVMLALALPFAYLKVRAGSVGIKVFGGIMLGMSFQLFNSLFSNVGMLSAWPAFMT 362 Query: 340 ALIPVILTISLSILIL 355 AL P +L L+++ L Sbjct: 363 ALTPPLLYFLLALMGL 378 >gi|118594057|ref|ZP_01551404.1| hypothetical protein MB2181_00275 [Methylophilales bacterium HTCC2181] gi|118439835|gb|EAV46462.1| hypothetical protein MB2181_00275 [Methylophilales bacterium HTCC2181] Length = 344 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 127/346 (36%), Gaps = 10/346 (2%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 + G + L D + +G+ Y IS +P I + +P L+ ++ Sbjct: 4 IFMIMFGLISLFAFFDFIQEIGDLGK-GGYGISHAMTFVILSIPGHIYETVPLAVLIGSM 62 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 L+ SEL + RA G SI ++ ++ IFT+L+ + IA + EK + Sbjct: 63 YTIGQLSYNSELNVIRASGFSIKKIATSLMITGGFFAIFTLLIGDLIAPNSEKNAQQMKI 122 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 ++ Q+ W++ +I + + E D + + +A Sbjct: 123 GLTNSVVGQEFSSGFWIKDGGNFVNIEN-----VLPDATLERINIYEFDSQFNLRTIVNA 177 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQKFSEQFASRSFYEII 253 + + +L+ + + + K S + ++ + S + + Sbjct: 178 EKGAYEEGEWRLENITQTILYENSVKKKSIPMGSWKSLMRPEMMNALIISPEKMSSFNLY 237 Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 K +S+ +N + E + I+ PLM + M + A RS + GI Sbjct: 238 KFISYLKINNQKST-KYEVALWEKIIHPLMPLVMIIFAVPFGFLQERSGGKFFKMFIGII 296 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 G T+++ P ++L+P ++ + L + ++ + E Sbjct: 297 IGIAYQITNTLIRHLSLLNDWQPFISSLVPTLIFLCLGLYLIKRFE 342 >gi|307728895|ref|YP_003906119.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] gi|307583430|gb|ADN56828.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] Length = 382 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 111/378 (29%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYERYFARQIYLTFIFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS------------------------N 157 I +++ + + + W++ + Sbjct: 120 VIGPYTDQLSERVRLEAMGSSVSSNFKSGVWVKDTLTARADGEQVTRFVNVGELKPDATI 179 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K N ++ D L + + Y Sbjct: 180 SNVRIYEFDSKFRLSNVRIAQSGVYQPPGHWRLTGVTDTQLIDVPPPAGTPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + N R E + Sbjct: 240 AKQVVLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHL-TENHQDTQRYEIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 VLYPFAVFVMLVLSLPFAYLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPGLVYLVLGLVGL 376 >gi|257462589|ref|ZP_05626999.1| hypothetical protein FuD12_01974 [Fusobacterium sp. D12] gi|317060240|ref|ZP_07924725.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313685916|gb|EFS22751.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 361 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 108/362 (29%), Gaps = 6/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K +LK Y L + + + + ++ + S + +P Sbjct: 1 MKKLDIYITKNFLKYFSYSLFSFLAIFVLSQIFKVLRYV-NEGQLSAGEVPLFIGNLLPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II + P L+ ++ + E++ + GI +L+ ++ S + + + + Sbjct: 60 IIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPILVSFFISLVVFYLND 119 Query: 122 PIATSGEKIGIDLI--QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +L + ++ ++ + + + E Sbjct: 120 RVYPGSVVRNRELRGKEDVEERELPKEKENAFFRNEEGRYVYYMKKINREKGIMDYVEIL 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST--TLNIPIKMDGF 237 K + I K+V Y + + D F Sbjct: 180 DMSEDFDKIERIITAKQGKYDFEKKIWIFKEVNLYYPETDRTESRVWIQDEKYRDEPDRF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + +KK + ++ P ++ + ++ Sbjct: 240 ISLSNIVPKQQTIAELKKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLALGSH 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + R + + I G+ Y + ++ G +G L P + IP +L ++ + + + Sbjct: 300 YVR-GMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYFMRR 358 Query: 358 KE 359 E Sbjct: 359 AE 360 >gi|269121333|ref|YP_003309510.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] gi|268615211|gb|ACZ09579.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] Length = 364 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 126/360 (35%), Gaps = 11/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y +K + +++ + ++ + +I ++ + VP Sbjct: 1 MKIIDKYIYKALILPSVFGISIFTFILIINVFIDIMEKLF-TNDLPFLLVIDYFIYLVPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ Q IP + ++ + N + T+E++ + G S++++ P ++ ILL + + + Sbjct: 60 VLTQTIPMGAFLGVMLTYGNFSETNEIIAIESAGTSLFRITRPAIIFGILLTVLGLFMEI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + ++ ++ SN ++ F Sbjct: 120 EVNPRALNNINIEKRNLFSSKPSSLTEAKVFL--SNSDAGFGFYVDEVDNSKAEASKFVL 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-------PIDKNSTTLNIPIKM 234 K+ + A+ A + LK V + + + ++ ++ K Sbjct: 178 FQRTKEGEYPTVFFAEKAKFEAGYMLLKNVEGFNFDKTGDRKVVARYEEQYLPMSTFFKQ 237 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + +K S + K S + + + + ++ I+ P V + + + Sbjct: 238 EDIEKKSRSEMNLRELREAYKQSIAEGESYEDSVKYMIKYNERIIGPFASVLLCWLGVLL 297 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ RS + I + F + + K + + P A +P + + L +++ Sbjct: 298 AVSNKRSGK-GISFGISLIVIFAYIGLASYAKIVVQKNHIDPNIAMWMPNFILLVLCLVL 356 >gi|198283962|ref|YP_002220283.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667335|ref|YP_002426598.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248483|gb|ACH84076.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519548|gb|ACK80134.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 357 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 114/355 (32%), Gaps = 4/355 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 R F+ L + L + LV++ + + +S++R AA ++P Sbjct: 1 MKRADRLLFRGMLLYSSLVLAMLLTLVYIAQIIAKSSG-PGHGVWSMTRLLSYAALQLPD 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +IP L+ +V L+ SE++ R G S+W+L P ++ +L + Sbjct: 60 VAYDVIPLALLLGALVWMSILSGHSEVIALRMSGWSVWRLEQPLLLVGLLGAGLMFALGE 119 Query: 122 PIATSGEKIGIDLIQQ--WKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + G W++ + ++ Sbjct: 120 WVIPVTAPAAEAMWANAGEPGAGFHNMGPRGLWLRYGTQIIQVGTVGDGGKILQNLHIAD 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + N + +A + ++ T + + Sbjct: 180 VRQGMVGINAMTTAAEAVFQGGHWYLHDVRLFRITPDQIQMTAVTETPWPVALHPATLSS 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 F+ + + + + +S + R F+ + P + + M L+A Sbjct: 240 FAHPTRTMTLPTLWQSYQAL-QSGALNMNRFALAFWRRVSYPWVGLVMILLAVPFVTRNP 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R V G+ G + + + SG + P+AA L+P+ L +++ + Sbjct: 299 RGGGLAARVMAGLVLGLGFHFLTEMSGYISVSGGIPPLAATLLPIALFAAVAGAL 353 >gi|153004268|ref|YP_001378593.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152027841|gb|ABS25609.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 370 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 104/361 (28%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K L LL ++ L + + S+ + +P Sbjct: 1 MRLLHRYLAKEILLPFAAGLLFLTQILLATQLLAQADVLFG-SGVSLVDVGAVVLYLLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P L+ ++ L E+V A G S L+ + + + + + Sbjct: 60 FLGYVLPIAFLLGAVLGVGRLAEDREVVALGAAGFSPAFLVPVPLAIGVAVAGLGLWLSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + N + D + Sbjct: 120 DVVPRSLDAARLRLNEIVKRNVMNDVRPGTFYDQIPGYTLYAERVHGGRWGNVLISDRSD 179 Query: 182 ITIDK-------KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + + + ++ + +V ++V +Y + L + + Sbjct: 180 PAAPVLALARAGGLEPVGAGEEMRLVLDDGEVHREQVDADEYVLATFRRADVVLGLGTAL 239 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 S + K + RAE + I PL ++ L+A + Sbjct: 240 SDRNAVSRTGRDDLAGLQARVAEARAKGDAAAARRAEGSLHRRIASPLAVIPFALLAVPL 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 SR V Y ++ + + G+L A +P ++ ++++ + Sbjct: 300 --GASRRAGRAFGVGATFLVVVAHYLLLRSGEVMAQRGVLPAPLALQLPTLVLSAIALAL 357 Query: 355 L 355 + Sbjct: 358 I 358 >gi|237713241|ref|ZP_04543722.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406619|ref|ZP_06083168.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646169|ref|ZP_06723825.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|294807861|ref|ZP_06766643.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|298484045|ref|ZP_07002214.1| membrane protein [Bacteroides sp. D22] gi|229446708|gb|EEO52499.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355322|gb|EEZ04413.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638498|gb|EFF56860.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|294444923|gb|EFG13608.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|295084257|emb|CBK65780.1| Predicted permeases [Bacteroides xylanisolvens XB1A] gi|298269826|gb|EFI11418.1| membrane protein [Bacteroides sp. D22] Length = 365 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 118/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE +++ E +P Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T + + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFTLSSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + + S I + N D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNSVSNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D A ++ + V E + I K + I ++ F Sbjct: 188 KKLVSHLTARRITYDTATVHKWTIHDYMVRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + E+ + + + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPELSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + P A IP IL ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTITSTFAVNGNVPPAIAVWIPNILYAGIAFFL 359 >gi|160884582|ref|ZP_02065585.1| hypothetical protein BACOVA_02569 [Bacteroides ovatus ATCC 8483] gi|260174906|ref|ZP_05761318.1| hypothetical protein BacD2_23825 [Bacteroides sp. D2] gi|315923149|ref|ZP_07919389.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110321|gb|EDO12066.1| hypothetical protein BACOVA_02569 [Bacteroides ovatus ATCC 8483] gi|313697024|gb|EFS33859.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 365 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 118/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE +++ E +P Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T + + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALVTFTLSSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + + S I + N D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNSVSNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D ++ + V E + I K + I ++ F Sbjct: 188 KKLVSHLTARRITYDTTTVHKWTIHDYMVRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + E+ ++ + + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPELSDYIAKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + P A IP IL ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTITSTFAVNGNVPPAVAVWIPNILYAGIAFFL 359 >gi|228472720|ref|ZP_04057478.1| permease YjgP/YjgQ family protein [Capnocytophaga gingivalis ATCC 33624] gi|228275771|gb|EEK14537.1| permease YjgP/YjgQ family protein [Capnocytophaga gingivalis ATCC 33624] Length = 359 Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 112/358 (31%), Gaps = 4/358 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K Y T L + + ++D E +M + + A V Sbjct: 1 MKIIDRYILKRYFLTYSALFLMFIPIGILVDYAEKNQKMTD-NHAPTEAIIKYYANFVVH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E+V + GIS + L P+ G+ +L +F +L+ Sbjct: 60 FANILFPIFLFLSVIWFTSKLAEKTEIVAMLSSGISYNRFLRPYFYGATILSVFVLLMGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + K + N + + + Sbjct: 120 FVVPYSSGVYNEFYGTYLSKDLYSKGSRLYNQVNKNEYIYVSSFDANTNQGANFVLERFD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + I + + + Sbjct: 180 GLRMTDKITANSIEWVQNDSVKTYRLYNYTHRKVGDWNDIYEKVYQKDTLLNFKTTDLLP 239 Query: 242 EQF--ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ +++F+E+ K ++ + + E +Y + +T+I +VS Sbjct: 240 IEYAAETKNFFELNKFIAEERQKGSPNIRIYELVYYRRWAAIFNVFILTIIGVAVSSVKK 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +A+G+ GF I + + P+ A +IP + L++ ++ + Sbjct: 300 R-GGMGVNLAFGVLIGFSYVFFERIFGIMAEKSGITPLMAVIIPNAMFALLAVYMIRK 356 >gi|255691880|ref|ZP_05415555.1| putative membrane protein [Bacteroides finegoldii DSM 17565] gi|260622433|gb|EEX45304.1| putative membrane protein [Bacteroides finegoldii DSM 17565] Length = 365 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 120/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE +++ E +P Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWSKIIFEYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T ++ + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALTTFMLSSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + + + S I + N D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNTARNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D ++ + + E + I K + I ++ F Sbjct: 188 KKLVSHLTARRVTYDTTTVHKWTIHDYMIRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPQLSDYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + PV A IP IL ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTITSTFAINGNVPPVIAVWIPNILYAGIAFFL 359 >gi|332991780|gb|AEF01835.1| permease YjgP/YjgQ [Alteromonas sp. SN2] Length = 366 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 116/354 (32%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY K LK+ L M + + + + + P++ Sbjct: 2 LIFRYLLKETLKSQLAIFFILMAIFVTLRFVRVLGDASD-GDIPAGLVLGFLGLYAPILA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ L SE+ + RA GIS W + + S+L+ I T + Sbjct: 61 SLVLPISAYLGIMLAHGRLYVDSEMTVMRACGISEWYITRVMLFLSVLIMIVTGAITLYF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L ++ ++ + Q N + IF+ + + T Sbjct: 121 APMAAENEYQLREKARNEAGLSAIIPGRFQQTGNAKAVIFVHDIDTDDQLRRVFLSQNKT 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + +N++ + N V++ + ++ D +Q Sbjct: 181 ENGENQVQVVYAQTGQVASNPDGTRNLVLKQGVQYEGQQSQKS--YRKVEFDEYQIQIAD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + A + + I IPL L + LIA +S R + Sbjct: 239 KPAEEARRKVSVLPTTELWGDES-IEARAELQWRIAIPLSLPFLILIAVPLSAVDPRQGR 297 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + ++ + + G + P + + + + ++++ Sbjct: 298 FGK-MFPAILLYLGYFLLLLASRRVLEDGKIPPQLGLWWVHTIMLIIGVALIVR 350 >gi|171914738|ref|ZP_02930208.1| permease YjgP/YjgQ family protein [Verrucomicrobium spinosum DSM 4136] Length = 576 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 122/366 (33%), Gaps = 15/366 (4%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL RY + +L+ ++ + L V+DL + E S ++ + +P I Sbjct: 176 KILERYVMRSFLQPVMFCFIAFCTLWIVMDLLDNMQDFQENK-ISRAQIVMFYIKLIPFI 234 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + P L+ + ++RT+EL+ G S++ +L PF V + + + Sbjct: 235 FVTVAPISLLLSTLYTLGRMSRTNELISMLGTGKSMFDVLKPFYVIACCASLLGMAANYH 294 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 A L++ K+ K + + ++ F+G Sbjct: 295 WAPVSAGNKEKLLENVKERIGKNFLVMGLMYRNQEDRRTWFVGQVPEDLRGDRMRRIEIR 354 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKK-------------VVEYQYGRIPIDKNSTTLN 229 D + +++ A A + D+ V + Sbjct: 355 QEDDQGRLVKGWFAKSAFWWPDRKVWSFYSGVEVTYKNGQVVAMQNFDAGGGHPRIDFEG 414 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 + ++I + ++ T ++ P + + L Sbjct: 415 WTETPWILLSGTLVPDYLGVPDLISYIRGNSAYGQRKLAPYLTHLFYRFTFPWQCLVVVL 474 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 AA +S+ FSR ++ + F+L + + + GKS ++ P + +P +L S Sbjct: 475 FAAPLSVVFSRRGLVG-GLSMAVIFFFVLMFMDNLFLNLGKSNVIPPFISVWLPHLLLGS 533 Query: 350 LSILIL 355 + I + Sbjct: 534 IGIYLF 539 >gi|172036942|ref|YP_001803443.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] gi|171698396|gb|ACB51377.1| putative permease YjgP/YjgQ [Cyanothece sp. ATCC 51142] Length = 394 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 115/357 (32%), Gaps = 16/357 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY F L L+ + L I + +S + ++P + Sbjct: 22 IMDRYLFIELLLPFLFGMGIFTSLGLSIGTLFDLVRRVTESGLMLSVAMKILVLKMPGFV 81 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SE++ R++G+S+++L+ P ++ +++ +V + I Sbjct: 82 SLAFPMAMLLAALMAYSRLSSDSEIIALRSLGVSVYRLIIPVILFGLVVTGCAFIVNDWI 141 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + +Q+ + + Q+ +L E++ Sbjct: 142 APAATHEAAVTLQRAVNQERPDFKERNIVYPEYKTVQEEDGQQVTVLTRLFYAEEYNGDK 201 Query: 184 IDKKNKIIHRKDADL---------AIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLN 229 + + ++ I ++ Y R + L Sbjct: 202 MQGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQLA 261 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 +P + F + + + + S R + + +P + + Sbjct: 262 LPRAPLDLANRRQNFTEMTIAQTQEYLKAMQLSGNEKRVRKVKVRLQEKYAMPFVCLIFG 321 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 ++ A++ + + + F Y + + S G G+L P A +P I Sbjct: 322 VVGAAIGVRPQ-NTNKATSFGVCVGLIFGYYLLAFMSTSLGIWGVLTPFLGAWLPNI 377 >gi|218246939|ref|YP_002372310.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|257060003|ref|YP_003137891.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] gi|218167417|gb|ACK66154.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8801] gi|256590169|gb|ACV01056.1| permease YjgP/YjgQ family protein [Cyanothece sp. PCC 8802] Length = 393 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 116/358 (32%), Gaps = 17/358 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY F L + + L I + I+ + ++P I Sbjct: 20 IMDRYLFIEILLPFFFGMGIFTSLGVAIGTLFDLVRRVTESGLLITVALKILVLKMPGFI 79 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ R++GISI++L+ P ++ S+L+ +V + I Sbjct: 80 VLAFPMAMLLAALMAYSRLSSDSELIAMRSLGISIYRLVIPAILFSLLVTGLAFIVNDWI 139 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + +++ ++ + G + + + + + Sbjct: 140 APAATHEAAVTLEKAVSKERPSFAEQRNIIYPEYRIIQQEDGKETTVLSRLFYAENFNGE 199 Query: 184 IDKKNKIIHRKDAD----------LAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTL 228 ++ I+ R D + + Y R + L Sbjct: 200 EMEELTILDRSQEDVNQIVTSQSATWNVAQNTWDFFNGTIYIIAPDGSYRNIVRFQHQQL 259 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAM 287 +P + F S + + + S R E + +P + + Sbjct: 260 KLPRAPLDLANRRQNFTEMSIAQTKEYLEVMKLSGNKERVRKVEVRIQEKYALPFVCLVF 319 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 L+ A++ + + + F Y + + S G GIL P AA P I Sbjct: 320 GLVGAAMGVRPQ-NTSRATSFGICVGLIFSYYLLSFVTSSLGIWGILTPFLAAWAPNI 376 >gi|221066428|ref|ZP_03542533.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] gi|220711451|gb|EED66819.1| permease YjgP/YjgQ family protein [Comamonas testosteroni KF-1] Length = 367 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 122/370 (32%), Gaps = 16/370 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMG-ELPNYSISRGAVLAATRVP 60 +L ++ ++ LY L + L F DL + +G Y+ +R + +P Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVTLSIP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ I V ++SE I R G+ W L ++ + + TVLV Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLILGMSFVLLTVLVG 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + IA + + L G + W++ + I + Sbjct: 121 DYIAPAADNFSQKLR--VVSKGQISRGATGAWLKEKQGDHSVAINVGAVKSPGDFVNVRI 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID--------KNSTTLNIPI 232 K + +++ V+ D + S + Sbjct: 179 FEFDSKGRIAAQINAQSAQVDEDEEQWTLHGVQGSKVAQEGDVTKLSPISEASMNWPTKV 238 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + + + + + + + E +F+ + PL + M ++A Sbjct: 239 TAAMVSGALLKPDRMTTIALFQFIRHLQDNGQA-AQKYEIEFWRKVFYPLSCLVMVVLAL 297 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + RS V G+ +G + + + G P AA P +L +LS+ Sbjct: 298 PFAYLHFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTALSL 357 Query: 353 ----LILLQK 358 ++L++ Sbjct: 358 SAFAWLVLRR 367 >gi|302037951|ref|YP_003798273.1| putative YjgP/YjgQ family permease [Candidatus Nitrospira defluvii] gi|300606015|emb|CBK42348.1| putative Permease, YjgP/YjgQ family [Candidatus Nitrospira defluvii] Length = 361 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 107/355 (30%), Gaps = 3/355 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY F+ L V + ++ + A +P + Sbjct: 5 ILDRYIFRELFSPFGISLAAL-CFVMLTKELLRLVELLVTKGIGFLSVLKVFAHLLPSFL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P ++ I F L+ ELV RA G S+ +L + + L+ T+++ Sbjct: 64 VLTLPIAGIIATITAFGRLSLDKELVAMRAAGFSLLRLSQSVFIFAALVCGLTLVMAQYG 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + D + + A++ I+ Sbjct: 124 QPWSNVNLKKVALNLLRDELVLELDRGVFNEAIPKMTIYVPDAQEGQDNRGIFVADERNP 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKV-KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D + + + + +L V + + P + + Sbjct: 184 ADPRIIVAQQYQVMTDPASSQVALRLMNGVIHSRPQNPEEYQKISFTSYDLKLSLSASLY 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 R+ ++I+ S + R ++Y + P + ++ V + RS Sbjct: 244 GAEERTPIDVIRAKLESTGWTDTNALRRLMEYYKDLAFPAASLVFCILGVPVGIVSKRSG 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 A G+ Y I + + + P A A +P ++ ++IL + Sbjct: 304 SIG-GFAVGVLVVIAYYVINVACEFLVTTLWISPFAGAWLPNVIFTVVTILWFYR 357 >gi|29346244|ref|NP_809747.1| hypothetical protein BT_0834 [Bacteroides thetaiotaomicron VPI-5482] gi|253568323|ref|ZP_04845734.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298385619|ref|ZP_06995177.1| membrane protein [Bacteroides sp. 1_1_14] gi|29338139|gb|AAO75941.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] gi|251842396|gb|EES70476.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298261760|gb|EFI04626.1| membrane protein [Bacteroides sp. 1_1_14] Length = 365 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 116/355 (32%), Gaps = 2/355 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 + L Y K +L T ++ + + + V D NE +++ E +P Sbjct: 6 LIKRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIP 65 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 P + I L SE++ + G+S +++ P+++ + ++ T ++ Sbjct: 66 YFSNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIAAATFMMS 125 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + I G ++ ++ + S I + N D Sbjct: 126 SFIIPKGSVTRLNFEDKYIKPKKVNSVRNVQLEVDSGVIAYIDNYNDGMKTGNRFSLDKF 185 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQK 239 + R D + + V E + I K + I + F Sbjct: 186 VDKKLVSHLTARRITYDTTTVNKWTIHDYMVRELDGLKEKITKGDRIDSIINMDPSDFLI 245 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + E+ + + + + E +++ I + +T+I S+S + Sbjct: 246 MKNQQEMLTSPELSEYIEKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSLSSRKT 305 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + F TI +F +G + P A IP IL ++ + Sbjct: 306 KGGMGLHLGIG-LGLSFSYILFQTITSTFAINGNVPPAIAVWIPNILYAGIAFYL 359 >gi|323525103|ref|YP_004227256.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] gi|323382105|gb|ADX54196.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] Length = 382 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 111/378 (29%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYERYFARQVYLTFIFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS------------------------N 157 I +++ + + + W++ + Sbjct: 120 VIGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARADGEQVTRFVNVGELRPDATI 179 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K N ++ D L + + Y Sbjct: 180 SNVRIYEFDSKFRLSNVRIAKSGVYQPPGHWQLTGVTDTQLIDVPPPSGTPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + N R E + Sbjct: 240 AKQVVLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHL-TENHQDTQRYEIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGMKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPGLVYLVLGLVGL 376 >gi|254446878|ref|ZP_05060353.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198256303|gb|EDY80612.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 370 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 125/370 (33%), Gaps = 15/370 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + RY F +LK L L+ + ++ + + + + + A P Sbjct: 1 MFSVADRYVFTEWLKAFALVLSSMFGLLILFEIQDSFTDLVSY-DATGGQILFYYAILAP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P LV + L+R +E V RA G+S++++ + S+L+ + Sbjct: 60 SFLTVTLPASILVSILYALGQLHRANEFVALRAAGMSVFRVTRSIWLASLLISGGLWYLN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSD-------IIPWMQISNPQQDIFIGAKKILPEN 173 + + + LI + + + + D + FI Sbjct: 120 SSLIPWSVEQSNQLITTLRQDSEAKILDSDEIGVVEGLAFDNRRENRMWFINRYSEYKSQ 179 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL----- 228 + + +++ L E + Sbjct: 180 AFGISVSIMDEERREVRRVMARYGYFDEDLGYWTLFDGRERLNDPDTGRERWPPFERLDA 239 Query: 229 -NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM 287 ++ F ++ SF+++ + + + + E + L+ + + Sbjct: 240 KDLTDDPTLMLLFGKRPKDLSFFQLRRITDSFTQEDNPNVLAYEVRLQALMASAASCLIV 299 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 IA ++ R+ P + V I F+ Y +++ +FG+ G L P AA IP++ Sbjct: 300 AGIAIPFAVSGVRT-NPAVGVTKSIGLFFVFYIFTSVLNAFGREGALSPEMAAWIPMVAM 358 Query: 348 ISLSILILLQ 357 I L+ +++ + Sbjct: 359 ILLAYVLMRR 368 >gi|171463872|ref|YP_001797985.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193410|gb|ACB44371.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 386 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 67/376 (17%), Positives = 119/376 (31%), Gaps = 25/376 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I RY K + L + L D+ + Y++ + A + P Sbjct: 6 PFIYERYLAKQIYAAFGFILFALVALFLFFDILSELGLV--QGTYTLPLALLHALLKAPS 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +IIP L+ +I VF L SE I R G+ + + L SI L T+++ Sbjct: 64 RISEIIPIAGLIGSIYVFAMLASQSEFTILRIAGLDVKRGLIALTKISIPLIALTLIMSE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD---------IFIGAKKILPE 172 I E + + + + W++ +D ++ K+ + Sbjct: 124 WIGPYTEAKSDQIRMKAMGSAYSSQFRTGVWVKDRLRDEDGSGPVRPGVRYVNVGKVDKD 183 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---------- 222 N I D + + R L V E ++ Sbjct: 184 NEIRNIRMYEFDDTYHLLSIRSAVSGQFDETGVWVLNDVTETRFKETKQSDPLNPVFSAQ 243 Query: 223 ---KNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 + TL + S + + +S + N +R F+ +V Sbjct: 244 TFTRPIVTLESEVTPQILSVLLISPEKMSIMSLGRFISHLRE-NKQDAHRHSIAFWKKVV 302 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 P + M +A + R+ I V GI G ++ + G G + Sbjct: 303 YPFTIFVMLTLALPFAYLKVRAGSVGIKVFGGIMLGMSFQLFNSLFSNVGLLGSWPALIT 362 Query: 340 ALIPVILTISLSILIL 355 AL P +L L++ L Sbjct: 363 ALTPPLLYFLLALAGL 378 >gi|153001631|ref|YP_001367312.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] gi|151366249|gb|ABS09249.1| permease YjgP/YjgQ family protein [Shewanella baltica OS185] Length = 370 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 112/347 (32%), Gaps = 14/347 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+++Y + LK + LL + + I + ++ S L +P ++ Sbjct: 2 IVFKYLIREVLKAQIAVLLVLLTIFISQHFVRILADASD-GDFPASLIMTLIGLNLPYLV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+V+ +G+S W + ++ +++ +FT + + Sbjct: 61 ILVLPLSLFLGILLAHGRMYSENEMVVLHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 A E+ ++++ + + N + +F+ D Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + ++ L V YQ D Q Sbjct: 181 PDDETGVTNVVVAKGGRVQEDSTGAQQLNLNDGVRYQGSPKAKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + + F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALPVDELVKIEGAEAVAE-------FHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 R + + + + ++ + + GI+ I Sbjct: 294 VRQGKFAK-MFPAVLLYLGYFGLMVAGRKALQDGIIPLYLGMWWIHI 339 >gi|212636935|ref|YP_002313460.1| permease YjgP/YjgQ [Shewanella piezotolerans WP3] gi|212558419|gb|ACJ30873.1| Permease YjgP/YjgQ [Shewanella piezotolerans WP3] Length = 371 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 114/347 (32%), Gaps = 14/347 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + LK + LL + + + + + S L +P +I Sbjct: 2 IVFRYLIREVLKAQIAVLLVLLAIFISQHFVRVLADASD-GEFPASLVMTLLGLNMPFLI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +GIS W + ++ +++ IFT + + Sbjct: 61 VLVLPLSLFLGILLAHGRMYSENEMVILHGVGISEWYITRVTLLLAVVNMIFTGFLSIYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 E+ +++ + + N + +F+ D Sbjct: 121 TPWAEERQNQVLEHAQSEAGIAALTQGRFQTSPNGRAVLFVERIGRDNKLDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + +++L+ V+YQ +D Q Sbjct: 181 PDDETGLANVVVARSGKVVEDATGGQRLQLEDGVQYQGSPRRVDYQVVEFGGYQMEIKDQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S I + M A +F++ + IPL + MTLIA ++ Sbjct: 241 EAGERRRKLSALPIDQLMDI-------DTPEATAEFHWRLAIPLAIPLMTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 +R + + I + ++ + + G++ Sbjct: 294 NRQGKFAK-MFPAILLYLGYFGLMVAGRKSLEDGVIPEFLGMWWIHA 339 >gi|260551089|ref|ZP_05825293.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] gi|260405856|gb|EEW99344.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] Length = 356 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 118/354 (33%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K + +L + ++ P+Y+ + + P + Sbjct: 6 IVAKYVTKTTALAMFGTTIVLSVLQVLFTYLGELGEL--KPDYNAWQAFIYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ L SEL++ R++GIS+W+++ + ++LL + + + + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + W + I + + DF Sbjct: 124 VPYTNEKAQSIKS--HRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQVVDFDKEY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + I + + +L + ++ + Sbjct: 182 HLQSVINAEQGKFIKDGQWSLQKASQTDILTDGNSILNNHDQQSLGLALQPKYVHMVTLD 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++I M + ++ + + F+ + P L+ + L+A S R Sbjct: 242 PEDLSPSQLISFMRYMDEYSQVPKT-YQLAFWQKVASPFSLITLVLVACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F G Y + + P L+P+IL +L + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLVPIILMFGAGSYLLYR 354 >gi|33861942|ref|NP_893503.1| putative permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640310|emb|CAE19845.1| possible permease [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 400 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/373 (12%), Positives = 117/373 (31%), Gaps = 19/373 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ L L+ + ++ + + + + + +P + Sbjct: 25 LIDRWLIAQILPPMLFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLAIKVLFFSLPSFL 84 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ +++GI +++ P + SIL+ T + + Sbjct: 85 VLSFPMAVLLSTLLAYGKLSANSELLALKSLGIKTSRIIAPAIAVSILMTGLTFYFNDNL 144 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN-------------PQQDIFIGAKKIL 170 S K+ ++ + + M + Sbjct: 145 VPSSNKLAESTLRAGIGSSFSSEEGKDNIMFSRYGSRIESATNKPTKTNTFLTHIFYASW 204 Query: 171 PENHIWEDFTS-ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNS 225 EN+I + T + + I + + + N + I Sbjct: 205 FENNIMQGVTVLDFSRQDIQQILKAKSAVFDKENSSWIFSDGSIVSVDQGGQTTNIQFEK 264 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLML 284 + + S + ++ ++ R + + +P Sbjct: 265 YRYPFVEGPLDLARVPKDATEMSLKQALEAERIYKETGNLKEIRRIQVRIQEKFTLPFAC 324 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + LI +S+ + + + + + Y + + SFG G+L P+ A +PV Sbjct: 325 LVFGLIGSSLGSKSNLRSSKSQGFGLSVILILVYYVMSFVFSSFGVKGLLSPIIATWLPV 384 Query: 345 ILTISLSILILLQ 357 ++++ I L + Sbjct: 385 LISMGGGIYFLRK 397 >gi|317059424|ref|ZP_07923909.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313685100|gb|EFS21935.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 362 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 110/363 (30%), Gaps = 6/363 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y K +LK Y L + + + + ++ + S + + +P Sbjct: 1 MMKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYV-NEGQLSPGQIPLFIGNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II + P L+ ++ + E++ + GI +L+ + S L+ + + Sbjct: 60 GIIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLN 119 Query: 121 NPIATSGEKIGIDLI--QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + + +L + ++ ++ + + + + E Sbjct: 120 DRVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK--MDG 236 K + + + Y ++ + + Sbjct: 180 LDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEY 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F S + +KK + ++ P ++ + ++ Sbjct: 240 FISLSNIVPKQQTIAELKKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLALGS 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R + + I G+ Y + ++ G +G L P + IP +L ++ + + Sbjct: 300 HYVR-GMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYFMR 358 Query: 357 QKE 359 + E Sbjct: 359 RAE 361 >gi|308272620|emb|CBX29224.1| hypothetical protein N47_J02050 [uncultured Desulfobacterium sp.] Length = 356 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 126/362 (34%), Gaps = 10/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 + I+ RY K LK + + + V+D + E + +++P Sbjct: 2 LMSIIDRYLTKEILKYFCIIIAAIIGIYIVVDFFDETEIFFE-SGLAFPTAFFCFISKMP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I Q IP L+ +V F +++ +E+V ++ GISI+ LL P ++ + + + Sbjct: 61 --IAQFIPLSVLLSILVTFGLMSKNNEIVAIKSGGISIYHLLRPILLIGSVFFCVVIFLS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + ++ Q I ++ + Sbjct: 119 EAVVPITKSKAEKILTQANRKKFAMALKEK---DIWIKGHNLITHIEYYDSSKKTIHGIK 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGF 237 D K +++ R D + + L ++E + + + ++ D Sbjct: 176 LYFFDDKFRVVRRIDCEKGVFNQGNWILYDIIEQKLDKNNSEISFHKQLIEHLVFSPDDI 235 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + S S +E+ + + T FY + P + + M + ++ Sbjct: 236 GVVAVTSESMSAFELYDYIKKIESEG-YDATTYRTDFYAKLSFPFICIIMCFVGTGIAFR 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + YGI + F + S G+ GIL P AALIP ++ + I +L Sbjct: 295 LGAKESLPVNIVYGIGAAFSYWVFFGFCISLGEGGILNPFFAALIPNLVFLGFGIFTVLN 354 Query: 358 KE 359 E Sbjct: 355 TE 356 >gi|88810917|ref|ZP_01126173.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88791456|gb|EAR22567.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 367 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 112/345 (32%), Gaps = 7/345 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 RY + + + L IDL E + G+ NY ++ +P Sbjct: 8 MKTAERYLMRAVAGGFVVAAAVLLPLFSFIDLIEQLDDTGQ-GNYHSAQAFAYVGLILPR 66 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ V L EL R++G+S + + +LL + + Sbjct: 67 RLIELGPFIALLGTTVALGGLASHRELTALRSVGVSPGGIALAALKAGVLLILLLAAIDQ 126 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + +S + + + +GA ++ E Sbjct: 127 LVASPLQQHAFGMRATALSGDSNAESGSGAALWARRGDRLLRVGALRLGRIPADIE--IF 184 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG---RIPIDKNSTTLNIPIKMDGFQ 238 + + + + I + +L V+ + + S + Sbjct: 185 HFNAEGHLVRYIHADYAEIHHRAPWRLNTVLVKAFMAGTPVTTRHASMVWQTFLTPAQIG 244 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S S ++ + + + + + +PL AM L+A S+ Sbjct: 245 LLEKPAESLSPVQLYGYVQYLRSTGQSSAV-YAVMLWQKLGLPLTAAAMILLAVPFSIGA 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 R +A G +G +Y I+ + G L P AL P Sbjct: 304 PRGASIGSRIALGAIAGLGVYLADQIIVNMGLLLDLSPPLIALGP 348 >gi|319793490|ref|YP_004155130.1| permease yjgp/yjgq family protein [Variovorax paradoxus EPS] gi|315595953|gb|ADU37019.1| permease YjgP/YjgQ family protein [Variovorax paradoxus EPS] Length = 369 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 122/372 (32%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPN--YSISRGAVLAATRV 59 + R + LK + LG + L F D + +G+ + Y + + V Sbjct: 1 MKTIRRLIYVEALKAVAFVTLGFLCLFFFFDFVDELQSVGKPESLAYGPMQALIYVTLLV 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +++P L+ I V L ++SE I R G+ W+ L ++ + I T + Sbjct: 61 PSHLYELLPITVLIGCIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGVGFVILTFAI 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + IA E+ L++ + W++ + I + ++ Sbjct: 121 GDYIAPLSERT-GQLLKSRYQGTYSLVGNTGAWLKEKRDNVSYAVNVLSISRDGS-LKNA 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI---------PIDKNSTTLNI 230 D + + A I + L + + Y + Sbjct: 179 RIFEFDANGYVSKQLVVKSARILDGHWALADIEKQDYDTRSAADKARIVTTEIPQMDWPT 238 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 + + + S ++ + + + R E +F+ + PL + M ++ Sbjct: 239 SLTAEMVSVALLRPDRMSTIDLFDYIRHLDANGQ-TAQRYEIEFWRKVFYPLSCLVMVVL 297 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A + R V G+ G + + + G P A P ++ + Sbjct: 298 ALPFAYLHFRQAGITTYVFGGVMIGISFFLLNNVFGYLGNLSNWSPWLTAAAPGLIYSVM 357 Query: 351 SI----LILLQK 358 S+ ++L++ Sbjct: 358 SLTAFSWLVLRR 369 >gi|187250533|ref|YP_001875015.1| permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] gi|186970693|gb|ACC97678.1| Permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] Length = 370 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 121/357 (33%), Gaps = 8/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P IL+RY + + + ILV + D E + + +P Sbjct: 10 PKILYRYIASKFWMPFFFAMAMFCILVLLGDFFENIKSITN-GYATFRLILKYCFLNLPS 68 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P L+ + V ++ E A G QL P + IL+ L+ Sbjct: 69 WLGMLLPVACLLAVLFVISDMVAGGEWTACLASGYRPGQLFVPLIACVILVVFLNSLMQE 128 Query: 122 PIATSGEKIGID-LIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +Q + + D Q NP+Q + + Sbjct: 129 FVYPRVSQKAEQVFRRQLRGDKDFQAGIERNITLRINPRQMLLAQTLQSGSLTMYGITTE 188 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNIPIKMDG 236 + + + + K V + ++ ++ + Sbjct: 189 FYNENWEIEKQIVARNLVWDKDEKIWFYKDGVIRYFEEGITIREEVFDTLESDLKVAPKD 248 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S E++KK+SF +S Y+ +T + + +P+M + M LI ++ Sbjct: 249 ISVGDIEEKAISVRELLKKISFLGRSG-LVTYKEKTNLHNKLAMPVMTIIMCLIGMPFAV 307 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + I + + F + ++T+ + G++GIL P A V+L + + Sbjct: 308 TVRKRGKV-INIIAALVMSFSFWWVMTMASTAGQNGILSPFIAGWGIVVLAAAAVFI 363 >gi|119476402|ref|ZP_01616753.1| hypothetical protein GP2143_08124 [marine gamma proteobacterium HTCC2143] gi|119450266|gb|EAW31501.1| hypothetical protein GP2143_08124 [marine gamma proteobacterium HTCC2143] Length = 353 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 124/360 (34%), Gaps = 12/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY +TL L + L + + + + NY VP Sbjct: 1 MNK-LGRYISTTITASTLLVLFMLLGLDAIAAIVDEMGYLS--GNYDFVAALRFVIYSVP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++PF LV + L SELV+ R+ G+S +++ + I++ I +LV Sbjct: 58 ATMFDLLPFAALVGCLAGLGTLASGSELVVMRSAGVSTLRIVWMVMRPIIVVMIAGMLVS 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E I S W + +N + N I T Sbjct: 118 EYVAPVTESIAKSERAIALKKSQNIVSREGLWHREAN-----RFMHFNAVQPNGILYGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGF 237 D+++K A AI + + L+ VVE + K S + + + Sbjct: 173 MYQFDEQHKPQSTLYAQRAIYQSGEWLLEDVVESIITDTRVRKIASPSKPWSTELSPELL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + ++ + + F+ I+ PL +A+ L+A S Sbjct: 233 NILMLDPIDLSIAGNDQYANYLQAQGLNSSP-YRLAFWKKILQPLSTLALVLLAISFIFG 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ G + T I+ P+ A+LIP+++ L + L + Sbjct: 292 PLREVTMGYRIFIGVLVGIVFRTAQDILAPASLVYGFQPIYASLIPIVICAVLGLWFLRR 351 >gi|218261075|ref|ZP_03476041.1| hypothetical protein PRABACTJOHN_01705 [Parabacteroides johnsonii DSM 18315] gi|218224239|gb|EEC96889.1| hypothetical protein PRABACTJOHN_01705 [Parabacteroides johnsonii DSM 18315] Length = 361 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 112/353 (31%), Gaps = 4/353 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K +L T ++ + + + V D+NE ++ + +P Sbjct: 6 KRIDWYIIKQFLGTYIFAIALIIAISVVFDINEKIDKFLSPDVPLKAIVFDYYMNFIPYF 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P T + I L SE++ A G+S +L+ P+ + + ++ + T + Sbjct: 66 ANLFSPLFTFIAVIFFTSKLADNSEVIAMLASGMSFRRLMLPYAISAGIIALSTFALNAY 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTS 181 I ID ++ N + E F Sbjct: 126 IIPPANATRIDFQNKYIKNKKVDYVRSAQLEIEPGVIAYFDRYDARSGMGYRFSLEHFED 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K L ++ + + TTL I F Sbjct: 186 KKMISRLTANSIKYDSLYNWTLIDYMIRDFDGMREHITEGSRLDTTLTIV--PSDFLISV 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ + K I + + +++ + +T I AS+S + Sbjct: 244 NDCETMTSPELSTYIDRQKKRGIGNIQTFQIEYHKRFAAIMAAFILTSIGASLSSRKIK- 302 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F T+ +F +G L P AA IP IL ++I + Sbjct: 303 GGMGLNIGIGLALSFSYILFTTVTSTFAINGNLSPAMAAWIPNILYTFIAIYL 355 >gi|255020900|ref|ZP_05292956.1| hypothetical protein ACA_1122 [Acidithiobacillus caldus ATCC 51756] gi|254969691|gb|EET27197.1| hypothetical protein ACA_1122 [Acidithiobacillus caldus ATCC 51756] Length = 357 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 121/354 (34%), Gaps = 3/354 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 R F+ L + L + L+FV +L ++ + + + ++P Sbjct: 1 MKRADRLLFRGMLGYSTLVLFVLLALMFVANLIAKSGG-PGHGSWDMGKLVTYISLQLPD 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +IP L+ ++ LN SELV R G S+W+L P + + + T + Sbjct: 60 LAYNLIPLALLLGALIWVSLLNSHSELVALRMSGWSLWRLQRPLLWVGLWGALLTFALGE 119 Query: 122 PIATSGEKIGIDLIQQW-KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +G + D W++ + I A + T Sbjct: 120 WVVPYTAPAAEAIWANGGQGSGFQALPDGGVWLRQGDQLIQIRAIAADGRRLEGLRIVIT 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ++D +++ ++A ++ V + ++ + + F Sbjct: 180 TPSLDAVTRMLDAREALYRDGAWQLQGVQSHVLGAQRIVSTTLVQQPWDVRLDPGTLRSF 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + + + + S + R F+ + P + + M + + R Sbjct: 240 SHPTRTMTLPALWESYQNLQGS-VLSMNRFALAFWKRVTYPWVGLVMIWLVVPLVTRNPR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + G+ G + + + SG + PV A + P+ L S++ + Sbjct: 299 GGGLAGRILMGLVLGLAFHFLTEMSGFISISGGIPPVFATVFPLALFASIAWGL 352 >gi|170077642|ref|YP_001734280.1| YjgP/YjgQ permease superfamily [Synechococcus sp. PCC 7002] gi|169885311|gb|ACA99024.1| putative permease, YjgP/YjgQ family superfamily [Synechococcus sp. PCC 7002] Length = 378 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 48/369 (13%), Positives = 111/369 (30%), Gaps = 15/369 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + L+ L L I + + + + + A R+P + Sbjct: 10 LLDRYIMAQLVGPFLFGLGIFTSLGLTIGVLFEVMRNVVANEITWAIAFQILALRLPEFL 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P TL+ + + +L+ SE++ R++G+ +L+ P ++ +L+ T + + I Sbjct: 70 VLGLPMATLLGTLTAYSSLSSFSEIIALRSVGLPPLRLMLPGLLLGLLITGITFGLNDWI 129 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN--------PQQDIFIGAKKILPENHI 175 K + + + + + + + Sbjct: 130 VPQTTKQASTIANIAQGEATIDYQEKNIIYPEYQRVKTATGNREILKTLFYAETFDGTQM 189 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLNI 230 + I A ++ YQ + LN+ Sbjct: 190 NNLTILDRAAVDTQRIITAAAAQWNANEQGWLVQDGSIYQIGANGSFSDIEQFETNFLNL 249 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTL 289 ++ + I + S R + + +P + + + Sbjct: 250 SDAPLILATRCQRPNEMTLQVIDVCLESLKLSRNERRIRTLQVRKQEKFSVPFVCIVFAM 309 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 + +++ L ++ V + F Y I I S G G + P P +L + Sbjct: 310 VGSAIGLRPQ-NSSRATSVGLSVAIVFAYYLISVISSSMGVWGTITPFMGTWFPNLLGLV 368 Query: 350 LSILILLQK 358 + IL + Sbjct: 369 AAGTILWRT 377 >gi|319778586|ref|YP_004129499.1| Permease-like protein [Taylorella equigenitalis MCE9] gi|317108610|gb|ADU91356.1| Permease-like protein [Taylorella equigenitalis MCE9] Length = 384 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 119/349 (34%), Gaps = 20/349 (5%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + E +++ E+ Y++ L A ++P + I+P L+ ++V NL + +E Sbjct: 27 FTFFETIEEFDKINEI--YTVWVMLALQAFQLPTRLYDILPIGLLIGSVVALANLAQRNE 84 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 LVI R G+S +LL ++ + + L+ I ++ + Q + Sbjct: 85 LVILRVSGLSSRKLLFMLWWIALPIIVLATLLSEVITPWADQKVSAINMAVLGKKSNQLN 144 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 + + + I + + I N+ A+ + N++++ Sbjct: 145 SGYWFREPVSSNTYRVINLTNLKNDGEIENIKVFEYSSIDNQFKRLLSAETGTLENNELE 204 Query: 208 LKKVVEYQ-----------------YGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 L VV+ L + D + S Sbjct: 205 LTNVVQTVSLVDINKILNDEHDPVLKVSNSNKLEKIKLKTSLTQDRLLATELKPDRMSTL 264 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 +++ + + + N + + + + P L+ M +A + +R + Sbjct: 265 KLLDYIDYLKE-NQLEHNKHVVALWRKLSYPFALIVMITLATPLGFIQTRKGGVGAKIFI 323 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 GI G + + + + + G L A +P I+ + L+I L E Sbjct: 324 GILLGIVFFMVNQLSLNMGMLSKLPAWITATLPNIIAMILAIYALYMIE 372 >gi|315122194|ref|YP_004062683.1| putative permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495596|gb|ADR52195.1| putative permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 321 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 216/322 (67%), Positives = 270/322 (83%), Gaps = 1/322 (0%) Query: 40 MGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW 99 M ELP YS SRGA+L+ TR+PLIIQQ IPFI+L+V+++VFFNLNRT+ELVI+RA+G+SIW Sbjct: 1 MSELPGYSTSRGAMLSVTRLPLIIQQTIPFISLIVSMIVFFNLNRTNELVITRAVGVSIW 60 Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ 159 QLL+PF GS LLG+FT+LVINP+A SGEK+GI ++ W+ D++ +IIPW+ I N + Sbjct: 61 QLLSPFTTGSFLLGMFTILVINPMAVSGEKMGISMVNNWRT-HDQKTLEIIPWIHIENKK 119 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI 219 +D FIGAKKILPE +I EDFT IT++K+N I R+DA AI+ + + LK+VVEY+YG + Sbjct: 120 EDFFIGAKKILPEKNILEDFTFITVNKENDTIFRQDAHFAIVQKNNIYLKEVVEYKYGAL 179 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 P+ KNST LNI IKM+ FQKF+EQF S SFYEIIKK+ FS++S++F NY +ETQFYF+I Sbjct: 180 PVFKNSTILNIAIKMNYFQKFTEQFTSHSFYEIIKKVIFSHQSSVFRNYFSETQFYFMIS 239 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 IP MLVAMTLIAA+VSLEF+RSNQPRIIV YG+ +GFMLYTIIT+MKSFGKSGILLP AA Sbjct: 240 IPFMLVAMTLIAAAVSLEFNRSNQPRIIVTYGVCAGFMLYTIITLMKSFGKSGILLPFAA 299 Query: 340 ALIPVILTISLSILILLQKEDG 361 ALIP+I I LSI ILL+KEDG Sbjct: 300 ALIPIISIICLSIFILLKKEDG 321 >gi|171059278|ref|YP_001791627.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] gi|170776723|gb|ACB34862.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] Length = 368 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 113/363 (31%), Gaps = 15/363 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + R ++ L T Y ++ + L F ID +G+ Y ++ A+ +VP + Sbjct: 3 TIRRLLYREILGATGYVMVAFLGLFFFIDFMAELENIGQ-HGYGAAQAALACLLQVPGHV 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ P L+ I L +SE I R G+ L + T ++ + + Sbjct: 62 YELAPIAVLIGAIYALARLAHSSEFTILRTGGLGPGLALLLLTWLGLGFAAITFVIGDFV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS----NPQQDIFIGAKKILPENHIWEDF 179 A + L + +G+ + W++ S + + + + + + Sbjct: 122 APWCDTQATLLQA--RASGNLSVASGGAWLKDSASAADGEHRYTVNFAAARSDGELEKVR 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP-------IDKNSTTLNIPI 232 K I I + +L V + S + Sbjct: 180 IFEFGPKGALITRTTAERAVIGDDGTWQLTDVRISHWTSDHTPRLDADEKLASHVWQSGL 239 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + + S + M+ R E QF+ + P + M +A Sbjct: 240 TRNVVAAAVLPLRTMSTLALYNYMTHLADH-EQAAQRYEIQFWKKALYPFACLVMMGLAL 298 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + RS ++V GI G + + G P AA P + + LS+ Sbjct: 299 PFAYLHGRSGGIGLMVFGGIMLGIGFVLLNNLSSHLGLLQNWTPWLAASAPSAIFLLLSL 358 Query: 353 LIL 355 Sbjct: 359 AAF 361 >gi|91788271|ref|YP_549223.1| permease YjgP/YjgQ [Polaromonas sp. JS666] gi|91697496|gb|ABE44325.1| permease YjgP/YjgQ [Polaromonas sp. JS666] Length = 381 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 127/384 (33%), Gaps = 30/384 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYS-------ISRGAVL 54 + R + L LG + L F DL + +G+ S I + Sbjct: 1 MRTIRRLIYGEVLTAIALVALGFLALFFFFDLVDELQYLGKNNGLSAAADIYQIRHALLY 60 Query: 55 AATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGI 114 A +P + +++P L+ I V L ++SE I R G+ W+ L +V Sbjct: 61 VALLIPNHLYELLPISVLIGTIFVMARLAQSSEYTILRTSGLGPWRALRLLLVLGAAFVT 120 Query: 115 FTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + V + +A + E+ L +++ W++ P + K++ P N Sbjct: 121 LSFAVGDYVAPTSERAAQLLKARYQSK--ITVGQTGAWLKEKQPYNSYVVNVKELTPNNE 178 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----------------GR 218 + +K + + D LK+ ++ Sbjct: 179 MKGVQIFEFDNKGLIVSTTQAPVAQFTGGDAWMLKQASRAEFDVPASPADISKPQNGARV 238 Query: 219 IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 + I + + S ++ + N + R E +F+ + Sbjct: 239 SRTTLQTFRWPTEISAEMVSVALLKPERMSTLDLFNYVRHLNANGQ-TAQRYEIEFWKKV 297 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 PL + M ++A + RS V G+ G + + + G P Sbjct: 298 FYPLSCLVMVMLALPFAYLHFRSGGIASYVFAGVMIGISFFLLNNVFGYIGNLRNWQPWL 357 Query: 339 AALIPVILTISLSI----LILLQK 358 AA P ++ +++S+ ++L++ Sbjct: 358 AAATPGLMYMAVSLGAFGWLVLRR 381 >gi|312888277|ref|ZP_07747853.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] gi|311299111|gb|EFQ76204.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] Length = 362 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 115/343 (33%), Gaps = 4/343 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I Y K YL T ++ + ++++ V D++E + + A +P Sbjct: 7 KIFDWYIIKKYLGTFVFTIAIFIVVIVVFDVSEKLDNFLKNNVSLKEIIFEYYAGSIPFY 66 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I + P I + I + +E+V + G S + L P+ + + L+ I ++L Sbjct: 67 IDMLSPLINFLAVIFFTAKMANQTEIVPVLSSGASFNRFLRPYFICASLIFIVSLLADIY 126 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + K+ I + D KSD+ + E F Sbjct: 127 LIPFTNKLKITFENAYVVLEDPTKSDVHIKLDEHTFVYMQSFDNASKTGYQFTLEKFDGD 186 Query: 183 TIDKKNKIIHR-KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +K D+ + + + V + + +K T L+ + F + Sbjct: 187 VLKQKLTANKIVYDSLKRVWSIQQFDTRYVNGLREKMVHGEKKDTVLD--MVPADFVLHN 244 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +++ S E+ + + Y V P+ +TLI S+S R Sbjct: 245 NIYSAMSRKELDNNIKKEEYRGTGVINDMLIEKYKRFVHPMASFVLTLIGVSLSSRKVR- 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + + G F F + F G L P+ A IP Sbjct: 304 GGVGLPLGIGFFLCFAYIVVDQFAVVFSLKGGLPPIIAVFIPN 346 >gi|239616611|ref|YP_002939933.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] gi|239505442|gb|ACR78929.1| permease YjgP/YjgQ family protein [Kosmotoga olearia TBF 19.5.1] Length = 1466 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 122/357 (34%), Gaps = 5/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y FK + L G + + ++L + + I + +L +P Sbjct: 1 MRILIKYIFKQSMGAFFIGLGGFL-IFVSLELLYQLSDLIVRYKVGIDKLFLLIYYNLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I IP L+ + +EL+ + GI++ ++ PFV+ ++LL T L + Sbjct: 60 FIVLGIPVGVLLAIFWTLSRMQSDNELIALQTHGITLKTVVLPFVIFAVLLSGITYLFND 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + ++ + +M+ + E + Sbjct: 120 YIVPYANRKAYEAQARFIYRRPEVTLKENAFMEDGKGRYLYIKKIDPETGELKKILLYDL 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ ++ + + S L+ + + + S Sbjct: 180 SGGKTRVTSAKSATKEGDKWIMHDGRVFELDSKGFLTFDMSFESLELDFGSDIQEYIRQS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ KK++ ++ + + + L + + +I +SL F+ Sbjct: 240 KSPREMTSAELKKKIASFSRLGVRTSSLM-VALQEKYSLSLAPLVIVMIGVPLSLIFNLR 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI--LILL 356 ++ ++ I + + + GK +L P A IP I+ I +L+ Sbjct: 299 SKSWSVILTFILI-VIYQGSGAWLSAMGKEDLLNPAYAPWIPNIIFAITGIITYLLI 354 >gi|299530037|ref|ZP_07043464.1| permease YjgP/YjgQ [Comamonas testosteroni S44] gi|298722017|gb|EFI62947.1| permease YjgP/YjgQ [Comamonas testosteroni S44] Length = 367 Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 123/370 (33%), Gaps = 16/370 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMG-ELPNYSISRGAVLAATRVP 60 +L ++ ++ LY L + L F DL + +G Y+ +R + +P Sbjct: 1 MKVLRNLIYREVIQAVLYVSLAFLALFFFFDLVDEMRWVGSGNAGYTATRALLFVTLSIP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ I V ++SE I R G+ W L +V + + TVLV Sbjct: 61 GHLYELMPIAVLIGAIFVMAKFAQSSEFTIMRTSGMGPWLALRTLLVLGMSFVVLTVLVG 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + IA + + L G + W++ + I + Sbjct: 121 DYIAPAADNFSQKLR--VVAKGQISRGATGAWLKEKQGNHSVAINVGAVKAPGDFVNVRI 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID--------KNSTTLNIPI 232 K + + ++ K V+ D + S + Sbjct: 179 FEFDSKGRIAAQINAQSAQVDEDKELWTLKGVQGSKVAQEGDVTKLSRISEASMNWPTKV 238 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + + + + + + + E +F+ + PL + M ++A Sbjct: 239 TAAMVSGALLKPDRMTTIALFQFVRHLQDNGQA-AQKYEIEFWRKVFYPLSCLVMVVLAL 297 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + RS V G+ +G + + + G P AA P +L +LS+ Sbjct: 298 PFAYLHFRSGGITAYVFGGVMAGISFFLLNNVFGYIGTLQSWWPWLAAAAPGLLYTALSL 357 Query: 353 ----LILLQK 358 ++L++ Sbjct: 358 SAFGWLVLRR 367 >gi|317486218|ref|ZP_07945052.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] gi|316922517|gb|EFV43769.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] Length = 357 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 133/365 (36%), Gaps = 15/365 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L+RY K L L + L + DL E + E S+ ++PL Sbjct: 1 MSLLFRYLTKNNAMILLPTLAVGIGLYVLTDLFERLDNFIE-AGLSVGMVLTYFVVKMPL 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I QI+P I L+ ++ + R+ EL +A GIS+ + N ++ I G + Sbjct: 60 VISQILPVIFLLSTVIQLCIMARSRELTALQAGGISLGVVANSMILCGIFWGGVQLGFSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +GE+ + Q+ + + + D + + P+ H Sbjct: 120 YLGVAGERESARIWQEEVRKKNLAAT---VLKDVWFTDGDWIVSLGTLDPQAHGTGFSGY 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKF 240 D I A + L+ V Y ++ L + + F+ Sbjct: 177 ELSDDGLSIKRIVQASTFTAEPNHWALQDVRVYTPDTFTQEQEPDFVLPLRQDPETFRLV 236 Query: 241 SE--QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + +++ +S S + T ++ + ++ M +A ++ Sbjct: 237 STGTKPQQLPLWQLGDAISQLKSSGS-NVEALRTAWHAKLAYAASILVMAFVATAIV--- 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL----I 354 S + I V + F+ + + T+ + G+ GIL P AA ++ + + + Sbjct: 293 SWKDNIYIAVTVALLCTFLYFAVYTLGTTLGQRGILHPFLAAWTANLIALFFAFWRLIPL 352 Query: 355 LLQKE 359 LL++E Sbjct: 353 LLRRE 357 >gi|237718555|ref|ZP_04549036.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293373071|ref|ZP_06619439.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|299145713|ref|ZP_07038781.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|229452015|gb|EEO57806.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292631957|gb|EFF50567.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|298516204|gb|EFI40085.1| putative membrane protein [Bacteroides sp. 3_1_23] Length = 365 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 117/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE +++ E +P Sbjct: 8 KRLDWYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKLMEHEAPWDKIIFEYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +++ P+++ + ++ + T + + Sbjct: 68 SNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMMRPYMISAAIIALVTFTLSSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G ++ ++ + + S I + N D Sbjct: 128 VIPKGSVTRLNFEDRYIKPKKQNSVSNVQLEVDSGVIAYIDNYNNAMKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D ++ + V E + I K + I ++ F Sbjct: 188 KKLVSHLTARRITYDTTTVHKWTIHDYMVRELDGLKEKITKGDRIDSIINMEPSDFLIMK 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + E+ + + + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPELSDYIVKQKRRGFANIKEFEIEYHKRIAMSFASFILTIIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G + P A IP IL ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTITSTFAVNGNVPPAVAVWIPNILYAGIAFFL 359 >gi|258405421|ref|YP_003198163.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] gi|257797648|gb|ACV68585.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] Length = 358 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 120/356 (33%), Gaps = 6/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + L L L + + +ID+ + + + + A ++PLI+ Sbjct: 3 TLHRYLLRQNLYYLLLSLGAGIGIYLLIDIFDRLDDFVGAQ-AGVEATVLYFAAKIPLIV 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q++P + L+ + + R EL A GI + +L F+V ++ + + Sbjct: 62 SQVLPAVFLLSLLAQLSIMRRQQELTALEAGGIPLSRLAVFFLVYAVFWSGLQLGFSEGL 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 G++ + +Q + W + + + + I Sbjct: 122 GVVGQRKSEAIWEQDVHGHAPSQRTLRDVWFKSEHFVVHMHRVTPRQKTGRKITVYVMDE 181 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + I + ++ + + + D+ L + Sbjct: 182 DFSRIRTIHRAERFQQQTDSWVLSEVTSLKPHAFTTSAQDRLPLPLQQDLADFLAVDPKA 241 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + S S +++ +S +S + R T ++ + LV M L+A + S Sbjct: 242 EPESLSLWQLGHLISELRQSGS-NVERLATTWHMKLAYGFSLVVMALLALGIVSA---SG 297 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + G+ F+ Y + + + G+ GI+ P + ++ L L+ Sbjct: 298 NIYVNIPIGLTVIFVYYALFVLGGTLGEKGIVSPWIGGWLGNMVWGGAGALRLVWI 353 >gi|315917902|ref|ZP_07914142.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691777|gb|EFS28612.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 362 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 110/363 (30%), Gaps = 6/363 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y K +LK Y L + + + + ++ + S + + +P Sbjct: 1 MMKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYV-NEGQLSPGQIPLFIGNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II + P L+ ++ + E++ + GI +L+ + S L+ + + Sbjct: 60 GIIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLN 119 Query: 121 NPIATSGEKIGIDLI--QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + + +L + ++ ++ + + + + E Sbjct: 120 DRVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK--MDG 236 K + + + Y ++ + + Sbjct: 180 LDMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEY 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F S + +KK + ++ P ++ + ++ Sbjct: 240 FISLSNIIPKQKTIAELKKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLALGS 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + R + + I G+ Y + ++ G +G L P + IP +L ++ + + Sbjct: 300 HYVR-GMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYFMR 358 Query: 357 QKE 359 + E Sbjct: 359 RAE 361 >gi|255013990|ref|ZP_05286116.1| hypothetical protein B2_08777 [Bacteroides sp. 2_1_7] Length = 361 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 4/353 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K +L T ++ + + + V D+NE ++ + +P Sbjct: 6 KRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPYF 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P T + I L SE++ A G+S +L+ P+ V + ++ I T ++ Sbjct: 66 ANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNAY 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTS 181 I + ID ++ N + E F Sbjct: 126 IIPPANETRIDFQNKYIRNKKVDYVKNAQLEIEPGVIAYFDSYDARSNMGYRFSLEHFED 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K L ++ + + TTL I F Sbjct: 186 KKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHITEGSRKDTTLTIV--PSDFLISV 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ ++ K I + + +++ + +T I AS+S + Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + F +T+ +F +G + P AA IP I+ ++I + Sbjct: 304 GMGMNIGIG-LALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFL 355 >gi|154492560|ref|ZP_02032186.1| hypothetical protein PARMER_02194 [Parabacteroides merdae ATCC 43184] gi|154087785|gb|EDN86830.1| hypothetical protein PARMER_02194 [Parabacteroides merdae ATCC 43184] Length = 361 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 113/353 (32%), Gaps = 4/353 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K +L T ++ + + + V D+NE ++ + +P Sbjct: 6 KRIDWYIIKQFLGTYIFAIALIIAISVVFDINEKIDKFLSPDVPLKAIVFDYYMNFIPYF 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P T + I L SE++ A G+S +L+ P+ + + ++ + T ++ Sbjct: 66 ANLFSPLFTFIAVIFFTSKLADNSEVIAMLASGMSFRRLMLPYAISAGIIALSTFVLNAY 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTS 181 I ID ++ N + E F Sbjct: 126 IIPPANATRIDFQNKYIKNKKVDYVRSAQLEIEPGVIAYFDRYDARSGMGYRFSLEHFED 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K L ++ + + TTL I F Sbjct: 186 KKMISRLTANSIKYDSLYNWTLIDYMIRDFDGMREHITEGSRMDTTLTIV--PSDFLISV 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ + K I + + +++ + +T I AS+S + Sbjct: 244 NDCETMTSSELSTYIDRQKKRGIGNIQTFQIEYHKRFAAIMAAFILTSIGASLSSRKIK- 302 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + G+ F T+ +F +G L P AA IP IL ++I + Sbjct: 303 GGMGLNIGIGLALSFSYILFTTVTSTFAINGNLSPAMAAWIPNILYTFIAIYL 355 >gi|170725439|ref|YP_001759465.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] gi|169810786|gb|ACA85370.1| permease YjgP/YjgQ family protein [Shewanella woodyi ATCC 51908] Length = 370 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 115/347 (33%), Gaps = 14/347 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + LK + L + + + + + S L +P + Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLAIFISQHFVRVLANASD-GEFPASLVMTLLGLNLPYLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + SE+VI ++G+S W + ++ +++ + T ++ + Sbjct: 61 VLVLPLSFFLGILMAHGRMYAESEMVILHSVGVSEWYITRVTLLLAVINMLITGVLAVYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 E+ +++ + + N + +F+ D Sbjct: 121 TPWAEERQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRDNELDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + +++L+ V+YQ +D Q Sbjct: 181 PEAEQGQSNIVLAQGGKVIEDETGGQRLQLRDGVQYQGTPKQVDFQVIEFGGYQMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +E+ S I + M ++ +F++ + IPL + +TLIA ++ Sbjct: 241 EVNERRRKLSALPIEELMKQEG-------PESKAEFHWRLAIPLSIPLLTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 R + + I + ++ + + GI+ + Sbjct: 294 VRQGKFAK-MFPAILLYLGYFGLMIAGRKALEDGIIPGYLGMWWIHL 339 >gi|82524032|emb|CAI78710.1| hypothetical protein [uncultured Flavobacteriaceae bacterium] Length = 358 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 110/355 (30%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T LL + + ++L E +M E + + Sbjct: 1 MKILDWYILKRYLFTFFMMLLLFIPIGITVNLAEKIGKMLE-NEVPLKAIVIFYLNFTVH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + G+S + L P+++G+ ++G + + Sbjct: 60 FAYLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGVSFSRFLRPYMIGASIIGGLALFLGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFT 180 + K + ++ K D+ + QI++ + + + + Sbjct: 120 YLTPIASKGFNEFEYKYLYPNRKTTQDVNVFRQINDNEFIYVSSFDLNNKLGINFTLEHI 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 V K + + + + ++ Sbjct: 180 EDNKLTYKISAKTIKYIAKDTTYRLVDYVKRTVGKIEDELVFERNKDTLFAFDVEDLTPV 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + E+ K + + R E Y +P+ + +T+IA +VS R Sbjct: 240 IYIAEILPYTELTKFIEKEKTRGSSNIGRYELVLYRKWSLPVSVFILTIIAVAVS-SIKR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +A GI + I + + A P ++ L+ +L Sbjct: 299 RGGMGVNLAIGICIAMVFVFFDKIFGVLAEQSNFPSIIAVWFPNVVFGILAFYLL 353 >gi|262068069|ref|ZP_06027681.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] gi|291378155|gb|EFE85673.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] Length = 363 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 113/364 (31%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y KY++K L ++G M + + +I + +P Sbjct: 1 MIKKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLEGGEIFDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ +F V Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVN 119 Query: 121 NPIATSGEKIGIDLIQ-QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 N I T + + + K+ + +N +G + Sbjct: 120 NSIYTKSLAKINFYRKGEIDASLRLPKTKENAFFINNNDGYIYLMGNINRETGLAEKVEI 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG--- 236 + + +K L V + + Sbjct: 180 VVYDTEISKPVEIITAQSGKYDKENKKWLLSGVNIYNVETKKSITKVEYDSDRFGEDPNN 239 Query: 237 -FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + ++ P + I SVS Sbjct: 240 FIRAAAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLSELAKRYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + I + + +G+ Y + ++ +GIL P ++ IP IL + + + Sbjct: 299 SKYVRGGRTTINLVICVVAGYGYYLVSGAFEAMSLNGILNPFISSWIPNILYFIIGMYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|150007422|ref|YP_001302165.1| hypothetical protein BDI_0773 [Parabacteroides distasonis ATCC 8503] gi|256839671|ref|ZP_05545180.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298375396|ref|ZP_06985353.1| membrane protein [Bacteroides sp. 3_1_19] gi|149935846|gb|ABR42543.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256738601|gb|EEU51926.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298267896|gb|EFI09552.1| membrane protein [Bacteroides sp. 3_1_19] Length = 361 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 4/353 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K +L T ++ + + + V D+NE ++ + +P Sbjct: 6 KRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPYF 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P T + I L SE++ A G+S +L+ P+ V + ++ I T ++ Sbjct: 66 ANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNAY 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTS 181 I + ID ++ N + E F Sbjct: 126 IIPPANETRIDFQNKYIRNKKVDYVKNAQLEIEPGVIAYFDSYDARSNMGYRFSLEHFED 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K L ++ + + TTL I F Sbjct: 186 KKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHISQGSRKDTTLTIV--PSDFLISV 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ ++ K I + + +++ + +T I AS+S + Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + F +T+ +F +G + P AA IP I+ ++I + Sbjct: 304 GMGMNIGIG-LALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFL 355 >gi|92115033|ref|YP_574961.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] gi|91798123|gb|ABE60262.1| permease YjgP/YjgQ [Chromohalobacter salexigens DSM 3043] Length = 386 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 112/360 (31%), Gaps = 15/360 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + + S L +P + Sbjct: 28 IVFRYLTREILATMAAVAGVLLLVIMGSRFIRYFGDAAQ-GDIPASILGTLMLYHLPGFM 86 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + ++P + ++ F L SE+ + A GIS +LL + ++L+ + L + Sbjct: 87 ELVLPLSFFLGILLAFGQLYLNSEITVLVACGISPNRLLRVTLWPALLVALLVALCSLWL 146 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--GAKKILPENHIWEDFTS 181 +G + ++++ K D + + + + + E+ + Sbjct: 147 TPNGARHNEMVLEEQKSRLDFSVLQPGRFQEFGSGRTAYTESLNDDRSRMESVFISERQP 206 Query: 182 ITIDKKNKIIHRKDADLAIIYND----KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + ++ R D + +D + L Y + Sbjct: 207 RSDGTPETVVTRADGGYQTVDDDTGSRFLVLTDGERYSVEPGNHVAERVQFDTYAVRLSQ 266 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + A + + +PLM+ +TL+A +S Sbjct: 267 ASERVDLQAAELTSTPQLLERGG-------SEAWANLQWRLSMPLMVPILTLLALPLSRV 319 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + IF +++ + G L P + + L + + + Sbjct: 320 NPRQGRFAK-LLPAIFLHISYLSLLLAAQDAIARGSLAPTIGMWPIHLGYLLLGVWMTRR 378 >gi|325295269|ref|YP_004281783.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065717|gb|ADY73724.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 354 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 141/360 (39%), Gaps = 8/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY F L+ + LL M+L VID + + I+ G + R+P Sbjct: 1 MVKRLDRYVFIETLRYFVLTLLTFMVLFIVIDFVSKMDTFLKSG---IADGFLYVIYRLP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L ++IP TL+ +V N + ++EL + +A+GIS+++ P + + L I + L+ Sbjct: 58 LYTVRVIPIATLIATMVTLSNFSFSNELTVVKALGISVYRFSFPIIFLAFLASILSFLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + K+N + S W + E F Sbjct: 118 ELVVPKSISLSKSIYYKVKENKNFHVSGKSIWFKKDEKTFVFMEYVNPAKSEAKRISIFF 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQK 239 K I +D KLK E + + K + +N+ I Sbjct: 178 LGKEFSPTK--RIDALYGINIKDDIWKLKNCFERKLKELKTTKISEKEINLGIGKKDLIF 235 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S + + K + ++ + Y + I L+ + + +I + + Sbjct: 236 TQIETETMSSFLLYKVIKQLKRAG-YDTTGYLVDLYSKLAISLLPLVVAVIGIPLGVFNP 294 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R+ + +V FM + I+ S GKSG+L P +A P ++ +S+ +L+L + + Sbjct: 295 RNKKGYTLVIAAALIVFM-WITISFFSSLGKSGVLPPFYSAFAPEVMFLSIGLLLLARMD 353 >gi|153004269|ref|YP_001378594.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] gi|152027842|gb|ABS25610.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. Fw109-5] Length = 360 Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 125/360 (34%), Gaps = 9/360 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL+ Y + L + L G + + +D + L + +++ Sbjct: 2 ILFGYVARRTLNAFVGALAGVVAIFLAVDFVDNSAAFTGPGWAPA--VLELYVNKAAVVV 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +Q+ P ++ + RT E RA+G+ W+L P V ++L G +LV + Sbjct: 60 RQVAPAAMILGAGIAVSTFRRTREYTAMRAVGLGPWRLAVPVVAVTLLAGGALLLVHDLW 119 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDI--IPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ G ++ + + + + T Sbjct: 120 GVEAAQRAEEIQALRFGRGGDRRRFEAAREPKRWFRGGDGRRVYHLRGTSPEGGFAHVTV 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGF 237 + + + +++ R DA+ D+ L+ V + + + S + P D F Sbjct: 180 LEVSEAFRLVRRVDAERMRPEGDRWLLEHVEDRTFLPDGTVRVERAASRRYDFPEPPDAF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + ++ ++ + + + + Y + P V ++A +++L Sbjct: 240 AVVPGRPTQMRWQTLLSQIGIRRRLGLP-VAELQLERYNRLAYPFAGVPGAMLALALALR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R + + + + + + G SG + P AA P ++ + + L + + Sbjct: 299 RNRKGHIAAALVESVGVSLLFWGTQGVTWAMGLSGHVAPWVAAWAPNLVFLVVGALAVRR 358 >gi|329907054|ref|ZP_08274546.1| putative Membrane protein; putative permease [Oxalobacteraceae bacterium IMCC9480] gi|327547111|gb|EGF31985.1| putative Membrane protein; putative permease [Oxalobacteraceae bacterium IMCC9480] Length = 378 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 62/377 (16%), Positives = 118/377 (31%), Gaps = 24/377 (6%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L +YF K L+ L+ LL + L DL +G Y I + A +P Sbjct: 3 VLQKYFGKEILRAVLFVLLAFLALFAFFDLINELPAVG-RGGYKIQHAFLYIALGLPGYT 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++P L+ +I V + SE I R G+S Q ++ + T L I Sbjct: 62 YELMPIAALIGSIYVLAQMASNSEFTIMRVSGLSTRQAGFMLAKIGLIFVLITFLFGEVI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT--- 180 + + L QQ + K+ W + + + + + + Sbjct: 122 SPLTAERAERLKQQAQGTTSKEF-RSGLWTKDQIRDGSGAMIGSRFVNVGELLPNGQLKD 180 Query: 181 ---SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN------------- 224 + + + + L V ++ + Sbjct: 181 VKLYEFDSELRLTSMVTASTADFQGDRRWLLSDVATTRFALTVFNLAVLPDAPSGIATTT 240 Query: 225 --STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPL 282 + L I D S ++ N R + F+ I+ P Sbjct: 241 APTRELISDITPDILSVTFADPDRMSALDLATYTRHL-AENRQVTERYDIAFWKKIIYPF 299 Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + M +A + +RS + + GI G I ++ G P+A A+ Sbjct: 300 AVFVMMALALPFAYLHARSGGVSLKIFMGIMIGVSFKLINSLFSHIGLLNTWPPLATAIA 359 Query: 343 PVILTISLSILILLQKE 359 P +L ++ ++ L E Sbjct: 360 PSLLFLAGALGALWWVE 376 >gi|296114025|ref|YP_003627963.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|295921719|gb|ADG62070.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|326566094|gb|EGE16251.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC1] gi|326572162|gb|EGE22158.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC7] gi|326573712|gb|EGE23670.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis O35E] Length = 369 Score = 113 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 129/368 (35%), Gaps = 18/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y + L ++G ++ V + + E Y+++ + R P + Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISET--YTLTDALLFILYRSPYFL 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q IP TL+ ++ L SEL++ RA G+SI+++++ ++ +++ + ++ V + Sbjct: 63 VQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVVISLGVNQFV 122 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + W + + E + E Sbjct: 123 LPTANQHAAAIRADTIYDKLITID--GYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQL 180 Query: 184 IDKK-------------NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 D + + +A A + ++ L + Sbjct: 181 KDGQLITALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTL 240 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 PI +++ S + R E F+ ++ P ++++ L+ Sbjct: 241 PIAPTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSL-RHELAFWQKLLSPFAVLSLVLV 299 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A+S RS + V + +G + + + + L P+ AL+P++L+ Sbjct: 300 ASSFVFGSLRSQGLGLRVVLALLTGLLFSYLTDLTGFVALATGLSPLLMALVPIVLSAMA 359 Query: 351 SILILLQK 358 + +L +K Sbjct: 360 GMYLLNRK 367 >gi|332299879|ref|YP_004441800.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] gi|332176942|gb|AEE12632.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] Length = 361 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 131/354 (37%), Gaps = 9/354 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + RY F +L T + ++ + + D+ E +++ + + A VP Sbjct: 8 TVDRYIFTQFLATYFFSIVLILAVAIAFDVTEKLDKLLQPEVPLRAIIWDYYANFVPYYA 67 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P + I V L SE++ + G+S +LL P+++G+ ++ I T L+ + + Sbjct: 68 NLFSPLFVFIAVIYVTSRLAENSEIIAILSCGVSFRRLLKPYMLGAAVIAILTFLLSSFV 127 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G +I ID ++ + ++ I + F+ E+ + F+ Sbjct: 128 IPPGNRIRIDFQNRYIKDKRITYANAI----QMQVAPETFMFMSYYNDESKVGYTFSMDR 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKF 240 + K+ + +L+ +G N IPI F Sbjct: 184 FEGKDLKSRMMANSIVYDTLHNWQLQDYTITYFGERQDSLLRGNQLDTIIPITPKDFLVT 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S ++ + + + + I + +TL+ S+S R Sbjct: 244 EGDVEMLSTPQLYRSIQQQRMRGAATQL-YAIELHKRIAMIPASFILTLMGVSLSAR-KR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +A G+ F+ +T+ SF +G + P+ AA +P ++ + +S ++ Sbjct: 302 KGGMGLALAVGLSLSFLYILFMTVTSSFAVTGAMSPMVAAWLPNLVYLGISFVL 355 >gi|332885188|gb|EGK05439.1| hypothetical protein HMPREF9456_02640 [Dysgonomonas mossii DSM 22836] Length = 365 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 121/359 (33%), Gaps = 13/359 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y K +L T ++ ++ + + V D+NE ++ + VP Sbjct: 6 ILDKYIIKKFLGTYIFSIILIISISVVFDINERLDKFLSNNAPLKAIVFDYYMNFVPYYT 65 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I L SE++ + G+S +L+ P+++ + ++ + + ++ + I Sbjct: 66 NLFSALFVFIAVIFFTSKLADNSEIIAMLSNGMSFKRLMKPYMISAGIIAVGSFILSSFI 125 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + I ++ + + I I K ++ D Sbjct: 126 IPPANETRIKFQNKYIKDKSVDYASRIQMQVDKGVILYIERFDNKTRLGYNLSLDKFEGK 185 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQKF 240 K + R + D A L ++ + + + + F Sbjct: 186 ELKSRLVASRIEYDTAY----HWVLNNYSIREFHGMKEKITTGTRIDTTLNVIPSDFLVS 241 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFH-----NYRAETQFYFLIVIPLMLVAMTLIAASVS 295 F S ++ + + + + + E +F+ +T+I AS+S Sbjct: 242 VNDFEQMSTPKLYSYIQRQKEKGLANVGGVSITQFEIEFHKRFASVFSAFILTIIGASLS 301 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + G+ T+ SF SG + P+ A IP I+ + ++ + Sbjct: 302 ARKMK-GGMGLNIGIGLGLSVTYIMFQTVSSSFAVSGTMPPMLAVWIPNIVFMFIAAYL 359 >gi|328954009|ref|YP_004371343.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] gi|328454333|gb|AEB10162.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] Length = 372 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 122/358 (34%), Gaps = 9/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P +L Y + + + L + + +ID E +++ ++PL Sbjct: 15 PRLLMLYVAREFCRNFFLTLAAFVGIYLIIDFFEKIDRL-HRAQLGFVGILEYFGAKLPL 73 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q++P L+ I+ F L R +E + G++I LL P ++ + +L +F + + Sbjct: 74 ATGQVLPASVLLAVIITFGILARHNETTAIKCAGLNITILLRPILLLASVLVLFLLSLNL 133 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + D ++ + W+ + + E+ Sbjct: 134 FLTPWLTQRVNIIWETKVDKKPARELIDLKWLW--YKGDRAIFHISEFRKDTKSMENVKI 191 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLNIPIKMDGF 237 D++ + A A + + + T+ + + + F Sbjct: 192 YVFDQQFHLTQFIAAQRAQWTGQNWRFSDGMIQTFLPQGEIVSEAFVERTMILTERPEDF 251 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + Y++ + + + + + + + I L + +TLI + Sbjct: 252 VNLERRVTELNGYDLYRYIRRLERDG-YDSRPYWVELHSRIAFALTPIIVTLIGGGLIF- 309 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + GI F+ + + T S G+ + + AA + I+ L L Sbjct: 310 WREKGNISLGIVSGIALVFIYWLLSTFFLSLGQVRFMPVLLAAWLANIIFGLGGFLAL 367 >gi|262382043|ref|ZP_06075181.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262297220|gb|EEY85150.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 361 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 4/353 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K +L T ++ + + + V D+NE ++ + +P Sbjct: 6 KRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPYF 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P T + I L SE++ A G+S +L+ P+ V + ++ I T ++ Sbjct: 66 ANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNAY 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTS 181 I + ID ++ N + E F Sbjct: 126 IIPPANETRIDFQNKYIRNKKVDYVKNAQLEIEPGIIAYFDSYDARSNMGYRFSLEHFED 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K L ++ + + TTL I F Sbjct: 186 KKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHITEGSRKDTTLTIV--PSDFLISV 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ ++ K I + + +++ + +T I AS+S + Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + F +T+ +F +G + P AA IP I+ ++I + Sbjct: 304 GMGMNIGIG-LALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFL 355 >gi|158337152|ref|YP_001518327.1| permease YjgP/YjgQ [Acaryochloris marina MBIC11017] gi|158307393|gb|ABW29010.1| permease YjgP/YjgQ, putative [Acaryochloris marina MBIC11017] Length = 390 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 116/358 (32%), Gaps = 7/358 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY F+ L L+ ++ + + I+ + ++P + Sbjct: 17 DRYLFRQLLPPFLWGMVAFSSIGVSAAVLFDLLGQVSEARLPIAIALSILTLQLPYFVSL 76 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP L+ ++ L EL+ ++ G+ + +L+ + S+L +F + + Sbjct: 77 AIPMSVLLACLLTLSRLQSDGELLALQSAGLHLNRLIGSCLGFSLLACLFMFGLTESLVP 136 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + L++Q G P Q++ + T I Sbjct: 137 VSQAHSHHLLRQTLQAGQFSLQGRHIVYPDIGPNQELRRLFYAQTGQGQTLSGITVIDWT 196 Query: 186 -KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP----IKMDGFQKF 240 N+ + + + K Y G +K+ + Sbjct: 197 LPNNQQVLIAQSATWNAERNIWIFKDGSIYAIGTDGAEKHIIEFSKQELQLPPQLSLTDS 256 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAE-TQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + ++ ++ RA Q + I +P ++ L+ +++ + Sbjct: 257 DINPNGVTLAQSQQLLTKLRQTGRPTQIRALAIQIHRKIALPFTVIIFGLVGSTLGIS-Q 315 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + Y +I I ++G+ GI+ P A P ++T + + +LL+ Sbjct: 316 RRLAVSNGFGISLILVLGQYILIFIADAWGQLGIISPWFGAWTPNLVTGLIGVSLLLR 373 >gi|118580061|ref|YP_901311.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118502771|gb|ABK99253.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 382 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 112/360 (31%), Gaps = 8/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+ + L L +++ + + ++ + +++ + +P Sbjct: 1 MKRTLYLSIIREITSLFLLGLGIFTLVLLMGRMIKLTEMVISR-GVALADMGRMIICLMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IP L+ ++ F L+ SE+ + +A GIS+ Q++ P ++ +++ + Sbjct: 60 SFLVYTIPMAFLLAVLLTFGRLSADSEITVMKACGISLVQIMPPVLLCALVAATLGLYAG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIP-WMQISNPQQDIFIGAKKILPENHIWEDF 179 G + + W I ++ + + + Sbjct: 120 VVGVPWGNRAFAAMSFDMLSQNVSSTIREKVFWDDIPGIVLYTDHYDEERHTLSGVVIND 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MD 235 D + + + + Sbjct: 180 ERNASRPLTIFASSGLVAGGANPRDVRLILRSGSIHAQGRGGEYRLIHFAEYVMNIAAPG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 G + + E+ + ++ S + + T+ + +P + ++A + Sbjct: 240 GTDTVTRAPREMTVTELHRSIA-SPSTQPKLRKKMATEMHSRFALPFASLVFAVLAVPLG 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L+ RS + A I Y +++++ + + G A IP ++ + L ++L Sbjct: 299 LQNRRSAR-SFGFAISIGVLLAYYILLSLLGTMAEKGSFPAPLALWIPNMVFLVLGWVLL 357 >gi|217077925|ref|YP_002335643.1| putative permease, YjgP/YjgQ family [Thermosipho africanus TCF52B] gi|217037780|gb|ACJ76302.1| putative permease, YjgP/YjgQ family [Thermosipho africanus TCF52B] Length = 1110 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 122/354 (34%), Gaps = 3/354 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K L L + + + ++L + + I + L +P Sbjct: 1 MKVLTKYILKLSLGPFLMGIGAFI-VFASVELLYQLSDIIVRHRVGILKLFELIYYNLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IP L V L + E+ GI +L+ PF++ SI+ G + + + Sbjct: 60 FASLGIPVGILFSIFWVLSQLYSSKEITAFLVHGIPSRKLVYPFLILSIIFGAVSFYLND 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + ++ I ++ + +I Q + + F + Sbjct: 120 QIVPKFNQKAMETISKYVYKKPEVTIKENVLTKIDESQYFFVKRYDQQQGILYDVVLFQN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +++ + + + Y K+ + ++ + + L++ ++ + Sbjct: 180 MQSEERIITAKKVEKEENSWYLINGKMYVTDRDGFMKLDLSFSKIKLDLKDDLESLMRVG 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+I+K+ K + + + + + ++ +SL F Sbjct: 240 KSPRDMTGEELIQKIKTFKKLGV-DPSPWIVELHGRYANSVGPFIIVILGVPLSLLFGLK 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ ++ + + + + GK ++ PV AA P +L + ++ Sbjct: 299 SKSWSVIFTFVIV-VLYQGSGAWLSAMGKENLINPVLAAWYPDLLFAIVGFILF 351 >gi|30248806|ref|NP_840876.1| hypothetical protein NE0802 [Nitrosomonas europaea ATCC 19718] gi|30180401|emb|CAD84713.1| putative membrane protein [Nitrosomonas europaea ATCC 19718] Length = 355 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 115/360 (31%), Gaps = 10/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY L + + L DL + + +G+ Y+ + +P Sbjct: 1 MKICHRYIAWQVLTGMVIATAILLPLFSFFDLLDQLDDVGK-GTYTTWDAFLYTVMLMPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 QI PFI L+ + L ELV R G+S + V LL T+ + Sbjct: 60 RFIQIAPFIALLGTVGALGALAVNLELVAMRVAGLSPLMIGLAPVGIGGLLIASTIALEY 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ L + G + + W + I K + Sbjct: 120 FVAPQFQQQATILRAVALEQGAELGKGLGIWTRNERNILRIGEMLHKGRATD----IEVI 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 + + H I KL V + I + + D Sbjct: 176 HFDGEGSMTAHVHAWYADIFDESLWKLHDVTIRTFSPDRITSRKAHILQWHSFLGPDDIA 235 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ S + E++K F + + + + +M +AM L+A Sbjct: 236 TLTKSPESLTPIELVKHAEFLRATGQKADA-YVMALWRKVGGAIMTIAMILVAIPFIFGS 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + G +Y I+ + G L P+ +++P ++ I+++ LL++ Sbjct: 295 VREG-LGGKLILAALMGISIYLFDQIIANIGLVFQLNPIVVSVVPGMVLIAVAAHWLLRR 353 >gi|120434961|ref|YP_860647.1| hypothetical protein GFO_0597 [Gramella forsetii KT0803] gi|117577111|emb|CAL65580.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803] Length = 341 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 120/340 (35%), Gaps = 3/340 (0%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 L+ + + ++L E +++ E A + P + I Sbjct: 1 MMLVLFIPIGITVNLAEKIDKILE-NEVPFIEVAYYYLDFTIYFANLLFPIFLFLSVIWF 59 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 L +E+V + G+S ++ L P+++G+ ++ I +++ +A K + Q+ Sbjct: 60 TSKLAMNTEIVAFLSSGVSFYRFLRPYLIGATIVCISALVLAMYLAPQASKGFNEFKYQY 119 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADL 198 G++ + + QI++ + + + + K KI Sbjct: 120 LKRGEQTQETSDVYRQINDNEYIYASHFQPKSKSARNFTLEHFEGNELKFKISASNLRYS 179 Query: 199 AIIYNDKVKLKKVVEY-QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 K+ + + S +P + D S + ++ E+ + + Sbjct: 180 EEDSLYKLSRVDKRIIGKEEDSIMFMRSLDTILPFEFDELTPESYIAETLNYTELNEFIE 239 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + + R Y IP+ +T+IA +V+ F R + +A GI F+ Sbjct: 240 KERRRGSGNINRYLVVAYKRWSIPISAFILTIIAVAVA-SFKRRGGMGVNLAVGITLAFI 298 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + P+ A P I+ L++++L + Sbjct: 299 FIFFDKVFGTMAEQSTFSPLIAVWFPNIVFGVLAVVLLFR 338 >gi|50083533|ref|YP_045043.1| hypothetical protein ACIAD0255 [Acinetobacter sp. ADP1] gi|49529509|emb|CAG67221.1| conserved hypothetical protein; putative permease [Acinetobacter sp. ADP1] Length = 356 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 117/354 (33%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ ++ K L + +IL + + + +YS + + P + Sbjct: 6 IVAKHVTKTTALAMLGTTIVLVILQVLFTYLGELSNL--KADYSAWQAFLYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ I+ L SEL++ R++GIS+W+++ + +++L + + + + Sbjct: 64 YEILPISALIGAILGLGTLASNSELIVMRSVGISLWRIVGWVIRSALVLVLLSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + W + + + + DF Sbjct: 124 VPYTNERANSVKS--HQSVAALGEVRGYWSREGQRFIYVDYANSQGQLKRIQVVDFDDNY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K + + + ++ Q + + ++ ++ + Sbjct: 182 RLKSVTNAEQGQFVKDGQWLLNHSQQMAIQGQGDAVLANAAKQPFSLALQPKYVHMVTID 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 SF +++ M++ + + + F+ + P L+ + L+A S R Sbjct: 242 PEDLSFSQLVSFMNYMREYSQVPKT-YQLAFWKKVASPFALITLVLVACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F G Y + + P L P++L +L + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYNPSPAWFVLGPIVLMFVAGSYLLYR 354 >gi|189461313|ref|ZP_03010098.1| hypothetical protein BACCOP_01963 [Bacteroides coprocola DSM 17136] gi|189431842|gb|EDV00827.1| hypothetical protein BACCOP_01963 [Bacteroides coprocola DSM 17136] Length = 378 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 121/353 (34%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L RY +L T + + + + V D+NE + + +P Sbjct: 21 KRLDRYIIVKFLGTYFFAIALIISIAVVFDVNENIDHFINNKAPLKAIVFDYYLNFIPYY 80 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S +L+ P+++ + ++ T ++ Sbjct: 81 TNLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRLMVPYMISAGIISAVTFVLGTE 140 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + +G + +++K + I S + H D Sbjct: 141 VIPTGSVTRLKFEERYKKKKSADYARNIQLEVDSGVVAYMERYDAYSKSGYHFSLDKFED 200 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + R D + + ++ + E + R I + + I ++ F Sbjct: 201 HKLVSHLTARRATYDTTMYHRWIIRDYMIREMRGMREYITRGDRLDSIIKMEPQDFLITR 260 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + ++ + +S + + E +++ I + +T I S+S + Sbjct: 261 GQQETMTSPQLKEYISKQKQRGFANIKEFEVEYHRRIAMSFAAFILTSIGLSLSSRKVKG 320 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F TI +F +G ++P A IP IL + ++I + Sbjct: 321 GMGLHLGIG-LGLSFSYILFQTISSTFAINGNMMPAIAVWIPNILYLFIAIYL 372 >gi|258593792|emb|CBE70133.1| putative Inner membrane protein yjgQ [NC10 bacterium 'Dutch sediment'] Length = 362 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 118/358 (32%), Gaps = 11/358 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + R+ + ++ + + + ++ L + +G Y++ + +P + Sbjct: 10 TIDRHIWFRVIRGYALVMAVLLSVFSLMALVNELDSVG-RGTYTLGDAFLNVILTIPSRM 68 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ P ++ +I+ L + EL+ + +G S ++ V ILL I + V I Sbjct: 69 IELAPTTAVLGSIIGLGELASSHELIAMQTLGTSPLRIGASVTVTGILLMIAVIGVQEWI 128 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A S +++ Q + + W + ++ + I + Sbjct: 129 APSADQLAYMRRIQAISKPEALHTRQGFWSRDGRQFIRVYQ-----VLPGRILSNVEIYE 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVK-LKKVVEYQYG---RIPIDKNSTTLNIPIKMDGFQK 239 D +++ A A L VV+ S + + + Sbjct: 184 FDDNHRLRLVTWAARAEPEGSHRWVLIDVVQRMVDGGGVASKQLASLSWAGSLTPTQAEL 243 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + + ++F K+ R E + + + +PL + M L+A L Sbjct: 244 LVLPAEILSRSTLSQYIAFLKKTGQ-DVARLEIRLWQQMTMPLSTLMMVLVAIPFVLGPL 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +G G + + G L L P+ + +++ + + Sbjct: 303 RKATAGKRILHGSLIGAAFHLGSHFIAHLGAILHLNAALTVLSPLAVLGGVTVWVYRR 360 >gi|15644481|ref|NP_229533.1| hypothetical protein TM1735 [Thermotoga maritima MSB8] gi|4982312|gb|AAD36800.1|AE001812_10 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 1074 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 126/359 (35%), Gaps = 14/359 (3%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 +L +Y K + L L G ++ V + ++ + + I + ++ +P Sbjct: 15 KVLIKYLLKLSVVPFLIGLGGFIVFVSL-EILYQLSDLIVRHRVGIEKLFLMLYYYLPYF 73 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ F L+ EL+ + GIS L+ PF++ LL I + + Sbjct: 74 VAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSDQ 133 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + + + ++ + +I + Q + + ++ Sbjct: 134 IVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFY------VEKYDERTSTMWNV 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-----YGRIPIDKNSTTLNIPIKMDGF 237 I + A + L Y + ++ + + L+I ++ Sbjct: 188 VIFRYGHEETIVTAKRVQKKGNDWYLFDGNYYTVDKDGFLKLDVHFSEMKLDITEDIEKL 247 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + E+ +K+ F K + + + + L + + L+ +SL Sbjct: 248 LRVGKTPKEMTGKELKEKIEFFKKVGVKPSP-WVVELHSRYANSLTPIVIVLVGVPLSLL 306 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 F ++ ++ + + + + GK +L PV A IP I+ + L+ + Sbjct: 307 FQLRSKSWGVIFTFVLV-VLYQGSGAWLSAMGKENLLNPVLAPWIPNIVFTIVGTLLFI 364 >gi|297184152|gb|ADI20271.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 374 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 114/373 (30%), Gaps = 26/373 (6%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY ++ + ++ + + V D++E + + + + Sbjct: 1 MNK-LDRYILLKFIGSFFLTMVLILSIAVVFDISEKLDDFQNGASMN-EIIFDYYINFIA 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + I + SE+V G S +LL P+ +G+ ++ ++ + Sbjct: 59 FYGNLFSALILFISTIWFTSRMASNSEIVAILTSGTSFRRLLRPYFIGASIICALSLTLN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + I +++ ++ S M ++ Sbjct: 119 HLLVPQTNIKRIAFEEKYVTGVNRPISQK---MHRQVLPGHYVYFETFSGVRESGYQMTY 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM----DG 236 + D + K D + +L ++ S + + + Sbjct: 176 EVFEDHQLKSKLSADFVRLDTATGRWRLDNFRLRTLDEKGGEQISFGRRMDTALAFTSEQ 235 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 A+ + E+ + ++ + + + + P+ L+A ++ Sbjct: 236 IAPKLNSIATMNSKELSRFIAQEELTGNENIASYQMEMQRRTSYPVSSYVFVLLAVGLAS 295 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL----------------LPVAAA 340 + R I +A G+ + + + ++F K+G+L A Sbjct: 296 QKKR-GGLGINIAIGLVLTAIYIFFMQLSETFAKTGLLSSEGLLGGPLEWIGIQPAEFAV 354 Query: 341 LIPVILTISLSIL 353 IP I+ +++ Sbjct: 355 WIPNIVFAIIALW 367 >gi|78779866|ref|YP_397978.1| putative permease [Prochlorococcus marinus str. MIT 9312] gi|78713365|gb|ABB50542.1| permease-like protein [Prochlorococcus marinus str. MIT 9312] Length = 400 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 111/370 (30%), Gaps = 18/370 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ R+ + L+ + ++ + + + + + +P + Sbjct: 25 LIDRWLLGQIIPPMLFAISAFTVISLSVGVMFDLIRKIVEYGLPVLKALQALIYSLPSFL 84 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SEL+ R++GI +++ P + SI + T + + Sbjct: 85 VLSFPMAVLLSTLLSYGKLSANSELLALRSLGIKTSRIIAPAIAVSIFMTGLTFYFNDNL 144 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN-------------PQQDIFIGAKKIL 170 + K+ ++ + ++ + I Sbjct: 145 VPNSNKLAELTLRSGVGSSFNREKSKNNIIFSRKGSRIDTNNKPTKTNTFLTHIFYASRF 204 Query: 171 PENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKV----VEYQYGRIPIDKNST 226 N + E K I + + N + I+ Sbjct: 205 ENNTMREVTVLDFSRVNIKQILTAKSAVFDKKNSSWVFADGSIVSTDSTGQTTSINFKQY 264 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLMLV 285 + + + S E ++ K R + + +P + Sbjct: 265 LYPFVEGPLDLARVPKDASDMSLKEALEAERIYKKIGDLKQIRKIQVRIQEKFTLPCACL 324 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 LI + + + + + + M Y I I SFG G+L P+ AA PVI Sbjct: 325 VFGLIGSILGSQSNLRSSKSQGFGLSVILILMYYVISFICSSFGVKGLLPPIIAAWFPVI 384 Query: 346 LTISLSILIL 355 +++S L Sbjct: 385 ISLSGGFYFL 394 >gi|126661397|ref|ZP_01732459.1| hypothetical protein CY0110_10922 [Cyanothece sp. CCY0110] gi|126617328|gb|EAZ88135.1| hypothetical protein CY0110_10922 [Cyanothece sp. CCY0110] Length = 353 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 109/347 (31%), Gaps = 16/347 (4%) Query: 26 ILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRT 85 +L I N + + + + +VP +P ++ ++ + L+ Sbjct: 4 VLGVAIGYLSDLADKVVDSNLPLMQASEILLLKVPEFTAYALPISVMLSTLLTYGRLSND 63 Query: 86 SELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQ 145 SEL+ R+ G+S+++L+ P +V S+ + T L+ + + ++ ++ Sbjct: 64 SELIAFRSCGVSLYRLIIPAMVMSLAVTGVTFLMSELVVPAANYRATAILVEYLQEDHPY 123 Query: 146 KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIH---------RKDA 196 + + +K L E F + + D+ Sbjct: 124 WQNKDIFYPDYEQVTLPNGDQEKRLKHLFFAEQFDGQHLKTLTVLEWLEERLNRIVVSDS 183 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM-----DGFQKFSEQFASRSFYE 251 + YQ K + F + + Sbjct: 184 ATWNGQEETWDFFNGTIYQLSSDASYKEAYPFEHRQLPLTKAAFEFALQGRDPYEMNIIQ 243 Query: 252 IIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 + M R + + + P + V ++ +++ + ++ Sbjct: 244 ARQYMKILKMMGDDKKLRMFQVRIQQKLAFPFICVVFGVVGSALGATPQQMSR-ATGFGL 302 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + F Y + ++ S G G++ PV A +P +L +++ +L + Sbjct: 303 SVVIIFSYYLLGFLIGSLGLMGLISPVLAGWLPNLLGLAMGGWLLYR 349 >gi|148270164|ref|YP_001244624.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281412494|ref|YP_003346573.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] gi|147735708|gb|ABQ47048.1| permease YjgP/YjgQ family protein [Thermotoga petrophila RKU-1] gi|281373597|gb|ADA67159.1| permease YjgP/YjgQ family protein [Thermotoga naphthophila RKU-10] Length = 1061 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 126/360 (35%), Gaps = 14/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K + L L G ++ V + ++ + + I + ++ +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSL-EILYQLSDLIVRHRVGIEKLFLMLYYYLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P L+ F L+ EL+ + GIS L+ PF++ LL I + + Sbjct: 60 FVAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + +I + Q + + + Sbjct: 120 QIVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFY------VEKYDERTSTMWN 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-----YGRIPIDKNSTTLNIPIKMDG 236 + I + A + L Y + ++ + + L+I ++ Sbjct: 174 VVIFRYGHEETIITAKRVQKKGNDWYLFNGNYYTVDKDGFLKLDVHFSEMKLDITEDIEK 233 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + E+ +K+ F K + + + + L + + L+ +SL Sbjct: 234 LLRVGKTPREMTGRELKEKIEFFKKVGVKPSP-WVVELHSRYANSLTPIVIVLVGVPLSL 292 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 F ++ ++ + + + + GK +L PV A IP I+ + L+ + Sbjct: 293 LFQLRSKSWGVIFTFVLV-VLYQGSGAWLSAMGKENLLDPVLAPWIPNIVFTIVGTLLFI 351 >gi|33862844|ref|NP_894404.1| putative permease [Prochlorococcus marinus str. MIT 9313] gi|33634760|emb|CAE20746.1| possible permease [Prochlorococcus marinus str. MIT 9313] Length = 403 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 39/367 (10%), Positives = 110/367 (29%), Gaps = 15/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ + L+ + ++ + + + + + + ++P + Sbjct: 32 LLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQVFSLKLPFFL 91 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SE R++G+S +++ P + ++L+ T + + I Sbjct: 92 VISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVI 151 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 I++ + + Sbjct: 152 VPRTNSSAEVTIKRALGKAIATEKGKHVVYSRFGTITGAEAEDWNQGLSQLFYAREFLKG 211 Query: 184 IDKK----------NKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLN 229 + + + + + + ++ + Sbjct: 212 EMEDVTVLDLSRLGFTQMLKAERAIWNEQEAMWEFFNGNILTLTPRGSTTSVEFDRYLYP 271 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 + K + + + + ++ S + R + + P+ + Sbjct: 272 LTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKFTFPMSCLVFG 331 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI +S+ + + + YT+ S G +G L P+ AA IPV +++ Sbjct: 332 LIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWIPVFISL 391 Query: 349 SLSILIL 355 + L+L Sbjct: 392 AGGGLLL 398 >gi|297171743|gb|ADI22735.1| predicted permeases [uncultured verrucomicrobium HF0500_27H16] Length = 412 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 115/364 (31%), Gaps = 12/364 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R+ +LK+ + L ++ +L + + E + P ++ Sbjct: 49 ITDRHLASEWLKSFGITTGAILGLFYIQNLYDNLGDLLE-HGAGAAEILQYYLILTPALL 107 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P LV + + +L+R E+ R++G S+W L+ + + LL + L+ N Sbjct: 108 SPVLPLSVLVATLFSYGSLHRNQEITAMRSMGRSVWSLMRVNMFLAALLSVGLFLLGNGG 167 Query: 124 ---ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + Q + + I + N + P H Sbjct: 168 LSKSAEKSREFYEELMQPPFDPASAEVATIKHLTFENASSHRLWVMNRYDPSKHKGHGVY 227 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-------PIDKNSTTLNIPIK 233 K R + A + Q +D + Sbjct: 228 LYLRYVSGKARERFTSRTAEFMPETATWVFREGRQVFFDEAGLSLRFVDFEELKMEGLES 287 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 ++ + S E+ + S R +++ + P + L+ Sbjct: 288 PLTLLARQKKLSDLSLRELRELAEVSQGGQGSEARRYGVRYHQALAGPFNCMLALLVGVP 347 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 ++ +R N + I + + + G+ GIL P A +P+ L ++ Sbjct: 348 FAIAGTRVNPM-VGATKAIGIFVGYFLLGGASRMLGQQGILEPAVAGWLPMGLMAFYALF 406 Query: 354 ILLQ 357 ++ + Sbjct: 407 LIGR 410 >gi|326565139|gb|EGE15330.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 103P14B1] gi|326572842|gb|EGE22827.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis CO72] gi|326574664|gb|EGE24600.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 101P30B1] Length = 369 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 128/368 (34%), Gaps = 18/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y + L ++G ++ V + + E Y+++ + R P + Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISET--YTLTDALLFILYRSPYFL 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q IP TL+ ++ L SEL++ RA G+SI+++++ ++ +++ ++ V + Sbjct: 63 VQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNQFV 122 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + W + + E + E Sbjct: 123 LPTANQYATAIRADTIYDKLITID--GYWSVNHDGDSQDVVYISYADNEGGLGEVKRYQL 180 Query: 184 IDKK-------------NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 D + + +A A + ++ L + Sbjct: 181 KDGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTL 240 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 PI +++ S + R E F+ ++ P ++++ L+ Sbjct: 241 PIAPTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSL-RHELAFWQKLLSPFAVLSLVLV 299 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A+S RS + V + +G + + + + L P+ AL+P++L+ Sbjct: 300 ASSFVFGSLRSQGLGLRVVLALLTGLLFSYLTDLTGFVALATGLSPLLMALVPIVLSAMA 359 Query: 351 SILILLQK 358 + +L +K Sbjct: 360 GMYLLNRK 367 >gi|169797502|ref|YP_001715295.1| hypothetical protein ABAYE3538 [Acinetobacter baumannii AYE] gi|184156574|ref|YP_001844913.1| permease [Acinetobacter baumannii ACICU] gi|213155684|ref|YP_002317729.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|215484938|ref|YP_002327177.1| hypothetical protein ABBFA_003301 [Acinetobacter baumannii AB307-0294] gi|239502070|ref|ZP_04661380.1| hypothetical protein AbauAB_07127 [Acinetobacter baumannii AB900] gi|260556394|ref|ZP_05828613.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|301346543|ref|ZP_07227284.1| hypothetical protein AbauAB0_09866 [Acinetobacter baumannii AB056] gi|301512955|ref|ZP_07238192.1| hypothetical protein AbauAB05_15269 [Acinetobacter baumannii AB058] gi|301594833|ref|ZP_07239841.1| hypothetical protein AbauAB059_03452 [Acinetobacter baumannii AB059] gi|332851502|ref|ZP_08433499.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332866798|ref|ZP_08437202.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332874942|ref|ZP_08442793.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] gi|169150429|emb|CAM88326.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|183208168|gb|ACC55566.1| predicted permease [Acinetobacter baumannii ACICU] gi|193076100|gb|ABO10704.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] gi|213054844|gb|ACJ39746.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|213988459|gb|ACJ58758.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260410449|gb|EEX03748.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|322506461|gb|ADX01915.1| permease [Acinetobacter baumannii 1656-2] gi|323516340|gb|ADX90721.1| permease [Acinetobacter baumannii TCDC-AB0715] gi|332729955|gb|EGJ61286.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332734406|gb|EGJ65526.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332736885|gb|EGJ67861.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] Length = 356 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 117/354 (33%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K + +L + ++ P+Y+ + + P + Sbjct: 6 IVAKYVTKTTALAMFGTTIVLSVLQILFTYLGELGEL--KPDYNAWQAFIYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ L SEL++ R++GIS+W+++ + ++LL + + + + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + W + I + + DF Sbjct: 124 VPYTNEKAQSVKS--HRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQVVDFNKDY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + + I + + +L + ++ + Sbjct: 182 HLQSLINAEQGKFIQDGQWTLQKASQMDILTDGNSILNNHDQQSLGLALQPKYVHMVTLD 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++I M + ++ + + F+ + P L+ + L+A S R Sbjct: 242 PEDLSPSQLISFMRYMDEYSQVPKT-YQLAFWQKVASPFSLITLVLVACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F G Y + + P L+P+IL +L + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLMPIILMFGAGSYLLYR 354 >gi|124023382|ref|YP_001017689.1| permease [Prochlorococcus marinus str. MIT 9303] gi|123963668|gb|ABM78424.1| possible permease [Prochlorococcus marinus str. MIT 9303] Length = 403 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 38/367 (10%), Positives = 112/367 (30%), Gaps = 15/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ + L+ + ++ + + + + + + ++P + Sbjct: 32 LLDRWLLGELIPVLLFAIAAFTVVSVSVGVMFDLVRKIVEFGLPLHFALQVFSLKLPFFL 91 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P TL+ ++ + L+ SE R++G+S +++ P + ++L+ T + + I Sbjct: 92 VISFPMATLLATLLAYSRLSSNSEFTALRSLGVSTRRIVAPALALALLMTGLTFIFNDVI 151 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 I++ + + + Sbjct: 152 VPRTNSSAEVTIKRALGKAIATEKGKHVVYSRFGTITGTKAEDRNQGLSQLFYAREFLKG 211 Query: 184 IDKKNKI----------IHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLN 229 + + + + + + + ++ + Sbjct: 212 EMEDVTVLDLSRLGFTQMLKAERAIWNEQEAMWEFFNGNILTLTPSGSTTSVEFDRYLYP 271 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 + K + + + + ++ S + R + + P+ + Sbjct: 272 LTSGPIRVAKLPKDANNMTVAQAMEAASIYTDAGNRKEARRLKVRIQEKFTFPMSCLVFG 331 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI +S+ + + + YT+ S G +G L P+ AA +PV +++ Sbjct: 332 LIGSSLGAKPNSRTSRTQGFGISLLLILAYYTLSFSFSSLGVTGTLTPMLAAWVPVFISL 391 Query: 349 SLSILIL 355 + L+L Sbjct: 392 AGGGLLL 398 >gi|160898976|ref|YP_001564558.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] gi|160364560|gb|ABX36173.1| permease YjgP/YjgQ family protein [Delftia acidovorans SPH-1] Length = 369 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 55/372 (14%), Positives = 119/372 (31%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP--NYSISRGAVLAATRV 59 +L ++ + Y L + L F DL + +G Y I+ + R+ Sbjct: 1 MRVLRNLLYRDIIAAVGYVTLAFLALFFFFDLVDELRWVGRGGDNGYQITHALLFVVLRI 60 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +++P L+ I V ++SE I R G+ W L +V + + T Sbjct: 61 PSHLYELMPITVLIGTIYVMARFAQSSEFTIMRTSGMGPWLALRTLMVLGLGFVLATFGT 120 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +A + E G ++ + W++ I I + I Sbjct: 121 GDYLAPAAENAGQNIRAIHLAQ--LSRGATGAWLKERQGDHSIAINVRAIRGPGDFSNVR 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ---------YGRIPIDKNSTTLNI 230 + + + + + VE + ++S Sbjct: 179 IFDFDGQGRISAQIHAQAAQVSEDGESWTLQGVEASRLKAKADAGMVLLREKEDSLVWKT 238 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 I + + S + + + + + E +F+ + P+ + M ++ Sbjct: 239 GISAEMVSAALLKPDRMSTISLFQYVRHLEANGQA-AQKYEIEFWRKVFYPMSCLVMVVL 297 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A + RS V G+ +G + + + G P A P +L L Sbjct: 298 ALPFAYLHFRSGGIAAYVFGGVMAGISFFLLNNVFGYIGTLQTWSPWLTAAAPGLLYSLL 357 Query: 351 SI----LILLQK 358 S+ ++L++ Sbjct: 358 SLTAFTWLVLRR 369 >gi|170288881|ref|YP_001739119.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] gi|170176384|gb|ACB09436.1| permease YjgP/YjgQ family protein [Thermotoga sp. RQ2] Length = 1061 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 126/360 (35%), Gaps = 14/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K + L L G ++ V + ++ + + I + ++ +P Sbjct: 1 MKVLIKYLLKLSVVPFLIGLGGFIVFVSL-EILYQLSDLIVRHRVGIEKLFLMLYYYLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P L+ F L+ EL+ + GIS L+ PF++ LL I + + Sbjct: 60 FVAMGVPVGVLLAIFWTFSRLSEERELMAIQVHGISQKNLIVPFLILGALLSIAVFFLSD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + +I + Q + + + Sbjct: 120 QIVPEYQSKAEEAMSKYVLKKPEVFVVENVISKIGDDQYFY------VEKYDERTSTMWN 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-----YGRIPIDKNSTTLNIPIKMDG 236 + I + A + L Y + ++ + + L+I ++ Sbjct: 174 VVIFRYGHEETIVTAKRVQKKGNDWYLFDGNYYTVDKDGFLKLDVHFSEMKLDITEDIEK 233 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + E+ +K+ F K + + + + L + + L+ +SL Sbjct: 234 LLRVGKTPREMTGRELKEKIEFFKKVGVKPSP-WVVELHSRYANSLTPIVIVLVGVPLSL 292 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 F ++ ++ + + + + GK +L PV A IP I+ + L+ + Sbjct: 293 LFQLRSKSWGVIFTFVLV-VLYQGSGAWLSAMGKENLLDPVLAPWIPNIVFTIVGTLLFI 351 >gi|313887034|ref|ZP_07820734.1| permease, YjgP/YjgQ family [Porphyromonas asaccharolytica PR426713P-I] gi|312923560|gb|EFR34369.1| permease, YjgP/YjgQ family [Porphyromonas asaccharolytica PR426713P-I] Length = 361 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 131/354 (37%), Gaps = 9/354 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + RY F +L T + ++ + + D+ E +++ + + A VP Sbjct: 8 TVDRYIFTQFLATYFFSIVLILAVAIAFDVTEKLDKLLQPEVPLRAIIWDYYANFVPYYA 67 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P + I V L SE++ + G+S +LL P+++G+ ++ I T L+ + + Sbjct: 68 NLFSPLFVFIAVIYVTSRLAENSEIIAILSCGVSFRRLLKPYMLGAAVIAILTFLLSSFV 127 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G +I ID ++ + ++ I + F+ E+ + F+ Sbjct: 128 IPPGNRIRIDFQNRYIKDKRITYANAI----QMQVAPETFMFMSYYNDESKVGYTFSMDR 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKF 240 + K+ + +L+ +G N IPI F Sbjct: 184 FEGKDLKSRMMANSIVYDTLHNWQLQDYTITYFGERQDSLLRGNQLDTIIPITPKDFLVT 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + ++ + + + + I + +TL+ S+S R Sbjct: 244 EGDVEMLTTPQLYRSIQQQRMRGAATQL-YAIELHKRIAMIPASFILTLMGVSLSAR-KR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +A G+ F+ +T+ SF +G + P+ AA +P ++ + +S ++ Sbjct: 302 KGGMGLALAVGLSLSFLYILFMTVTSSFAVTGAMSPMVAAWLPNLVYLGISFVL 355 >gi|237740742|ref|ZP_04571223.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229422759|gb|EEO37806.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 363 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 117/363 (32%), Gaps = 5/363 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLVG-GEIFDYIINLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ +F V Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFIISLFVFFVN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGD--KQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRKGEIDASLRLPTTKENAFFINNTDGYIYLMGNINRETGNAEKIEI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK--NSTTLNIPIKMDG 236 T K I + N K L V Y + + Sbjct: 180 VVYDTEISKPVEIITAQSGKYDKDNKKWMLSGVNIYNVETKKNITKVEYDSDRFREDPNN 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F + + + + +KK K+ + P + I SVS Sbjct: 240 FIRAAAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSVSS 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ R + + + + +G+ Y + ++ +GIL P ++ IP IL + + + Sbjct: 300 KYVRGGRTTLNLVICVVAGYGYYLVSGAFEAMSLNGILNPFISSWIPNILYFIIGMYFMN 359 Query: 357 QKE 359 + E Sbjct: 360 RAE 362 >gi|169634641|ref|YP_001708377.1| hypothetical protein ABSDF3306 [Acinetobacter baumannii SDF] gi|169153433|emb|CAP02575.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] Length = 356 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 118/354 (33%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K + +L + ++ P+Y+ + + P + Sbjct: 6 IVAKYVTKTTALAMFGTTIVLSVLQILFTYLGELGEL--KPDYNAWQAFIYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ L SEL++ R++GIS+W+++ + ++LL + + + + Sbjct: 64 YEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + W + I + + DF Sbjct: 124 VPYTNEKAQSVKS--HRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQVVDFNKDY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + + I + + +L + ++ + Sbjct: 182 HLQSLINAEQGKFIQDGQWTLQKASQMDILTDGNSILNNHDQQSLGLALQPKYVHMVTLD 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++I M + ++ + + F+ + P L+ + L+A S R + Sbjct: 242 PEDLSPSQLISFMRYMDEYSQVPKT-YQLAFWQKVASPFSLITLVLVACSFIFGPLRQHS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F G Y + + P L+P+IL +L + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLMPIILMFGAGSYLLYR 354 >gi|294782105|ref|ZP_06747431.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] gi|294480746|gb|EFG28521.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] Length = 363 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 112/364 (30%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y KY++K L ++G M + + +I + +P Sbjct: 1 MIKKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLEGGEIFDYIVNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ +F V Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFIISLFVFFVN 119 Query: 121 NPIATSGEKIGIDLIQ-QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 N I T + + + K+ + + +G + Sbjct: 120 NSIYTKSLAKINFYRKGEIDASLRLPKTKENAFFINNTDGYIYLMGNINRETGEAEKIEI 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG--- 236 + + ++K L V + + Sbjct: 180 VIYDTEISKPVEIITAQSGKYDKDNKKWLLSGVNIYNVETKKTITKVAYDSDRFGEDPNN 239 Query: 237 -FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + + P + I SVS Sbjct: 240 FIRAAAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GIL P ++ IP IL + + + Sbjct: 299 SKYVRGGRTTLNLVICVVAGYGYYLVSGAFEAMSLNGILNPFISSWIPNILYFIIGMYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|83596032|gb|ABC25390.1| predicted permease YjgP/YjgQ family superfamily [uncultured marine bacterium Ant39E11] Length = 359 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 109/353 (30%), Gaps = 2/353 (0%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY +L F+ M++ V D+++ + + + + Sbjct: 5 DRYILSKFLGNFALFMGLIMLIAMVFDVSQKLDDFMDNDLNLATILLDYYLNFIAFYGNT 64 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 I + + + E+ G+S +L+ P+++G+ ++ + + + + I Sbjct: 65 FSALILFLSTVFFTARMANQGEISAMLTGGLSFGRLMRPYLIGAAVICLASASLSHFIIP 124 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 I + + + + + + + + + + + Sbjct: 125 GTNSSRIAFEEAYIQHRVTSRPIHLHRQVLPGHFIYVETWSPDRMGGYNFTYEHFEQGRM 184 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFSEQF 244 D A G + + + F + Sbjct: 185 VDRLKASFIKYDSAKTSWHMDNWTLRQWQSNGHMSLTSGVRLDSSFAFLPQQFSSNNRGI 244 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + E+ K + S E ++Y PL + LIAA+++ R Sbjct: 245 ETMTSPELYKALKQVRLSGSEAVLFYEMEWYRRSAYPLSAFILVLIAAAMASRSQR-GGI 303 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ + ++ + + + + P+ A +P IL + +++L + Sbjct: 304 GAQIALGLLVAVLYIFLMQLSSTLASTHVTSPLVAVWVPNILFLGVAMLAYRR 356 >gi|197105523|ref|YP_002130900.1| hypothetical protein PHZ_c2060 [Phenylobacterium zucineum HLK1] gi|196478943|gb|ACG78471.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 351 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 126/358 (35%), Gaps = 13/358 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y F+ L L + ++ ++DL ++ ++ + A A R+P +++ Sbjct: 3 LGLYLFRLAFGRILAALAVLVGILQILDLLDVTTEILDR-ELGAQGVAYYALLRLPRLVE 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q P L ++ F L S + R+ GIS +++ + + L+ +++ +A Sbjct: 62 QAAPLAVLAGSLFAFAKLAGESAVTAMRSTGISAYRITLLALPAAALVAAAQLVIGMAVA 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + Q + + D+I + + + + + Sbjct: 122 PRTDAALTRWWQATTPREEVKPQDVITFRVGDDIVSA------RPSADAQRMSEVVIYRR 175 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKFS 241 D +++ R AD A+ +L + S T ++ + Sbjct: 176 DGAGRLVQRTAADAAVYDQGAWRLIAPRFEAISEGEVQTGAAESMTWTRSLRPADVRALQ 235 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ S E + + ++ +TQ + P + M L+AA +L R Sbjct: 236 SGGSTISAAEARRAL--HGGVSVRPKTYYDTQLHRAWAAPAACLVMLLLAAPAALANFRG 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 ++V + +G + + G+SG + AA ++ +L + LL E Sbjct: 294 GGTTLMV-QCLAAGLLFLVFDGAFTALGESGAAPAMLAAWGAPVIFGALGVTALLYLE 350 >gi|296327425|ref|ZP_06869972.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155438|gb|EFG96208.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 363 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 117/364 (32%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLAGGEIFDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ +F V Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ + + + E Sbjct: 120 NSIYTKSLAKINFYRRGEIDETLKLPTTKENAFFINNTEGYLYLMGKINRETGLAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP---IDKNSTTLNIPIKMD 235 T K K I + +K V Y + + L + Sbjct: 180 VKFNTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVETKETTAKTEYKSNLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + + P + I SVS Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GIL P A+ +P IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVVAGYGYYLVSGAFEAMSLNGILNPFIASWVPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|71901306|ref|ZP_00683403.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71728926|gb|EAO31060.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 385 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + T L L + L V +G+ +YS A VP Sbjct: 26 DRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGK-GSYSFGHAIAYIAYTVPRRAYT 84 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S + ++ + VL + Sbjct: 85 LFPTAAVIGMLLGLGQLAATSELTALRALGVSRTRSSLSVMMMIGMGTGLMVLTGETLGP 144 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L K D + W + + G +K L I D Sbjct: 145 WAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIMLILHDVRL 204 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + ++ A + D L++V + + + + + Sbjct: 205 YQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSRLDPAALA 264 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +E+++ + + + N E Q++ P+ ++A+ L A S Sbjct: 265 AGLAKPRNLSAHELVQSIEY-RRRNHLDARDFEGQYWSRWFYPINVLALCLAAIPFSFGL 323 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS GI + + + L L+P ++ + S + ++ Sbjct: 324 LRSGGMGKRTFLGILFALSFWMLQMFFERIASVLKLNYQIFYLLPPMVMLCGSYWLFRRQ 383 >gi|327402663|ref|YP_004343501.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] gi|327318171|gb|AEA42663.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] Length = 373 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 117/368 (31%), Gaps = 15/368 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY + +L T + L M+L V D+ E + E + + Sbjct: 1 MLKILDRYIIRKFLSTFFFMLGIIMLLAMVFDIAERLSDFIEKQASFKAIVFDYYLNFLL 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + I + + +E++ G +++ P+++ + +L + ++++ Sbjct: 61 YYGNTFSSMIVFIAVIWFTAKMAQDAEIIPMLFSGRPFIRIIRPYMIAATILMLLSLVLN 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP--------- 171 + + ++ +D + + + ++ + + + ++ Sbjct: 121 HFVLPRANRVRLDFEESFYRDRLLVENYNAEFPGNELVHYSTYNSEENMINDFVIERYDS 180 Query: 172 -----ENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST 226 + I K+ ++ + ++ ++ + + Sbjct: 181 QNRLIHFMKARTASVIPGVKRWRLTDVFERKVSYSDTSGTSKGEMESIIQKHQLTENHLK 240 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 +P +D + +F E+ ++ E + Y P Sbjct: 241 DTTLPYNVDDIAVRDNVVEAMTFRELSSFIAKEKAKGNPSVAMYEIELYQRSSYPFATYV 300 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 +TLI SVS R I + F+ + I + VAA +P ++ Sbjct: 301 LTLIGVSVSSRKKRGGIGINIAIG-LLFVFIYIFAMKITTVAATTVGFPSVAAVWLPNVM 359 Query: 347 TISLSILI 354 L++ + Sbjct: 360 FGILALFL 367 >gi|254303141|ref|ZP_04970499.1| hypothetical protein FNP_0781 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323333|gb|EDK88583.1| hypothetical protein FNP_0781 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 363 Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 115/364 (31%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLAGGEIFDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ +F + Sbjct: 60 KMFVETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRRGEVDETLKLPTTKENAFFINNTDGYLYLMGKINRETGVAENIEI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMD 235 K K I + +K Y + L + Sbjct: 180 VKFENEISKPKEIITAKSAKFDTEENKWIFSNANIYNVDTKETVTKTEYKSNLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + + P + I SVS Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GIL P A+ IP IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVVAGYGYYLVSGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|294785396|ref|ZP_06750684.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] gi|294487110|gb|EFG34472.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] Length = 363 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 115/364 (31%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLAGGEIFDYIINLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ + + Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGVAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMD 235 T K K I + DK V Y + L + Sbjct: 180 VKFETQISKPKEIITAKSAKFDTDEDKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + + P + I S S Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSAS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GI+ P A+ IP IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVVAGYGYYLVSGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|71899265|ref|ZP_00681427.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71730998|gb|EAO33067.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 385 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + T L L + L V +G+ +YS A VP Sbjct: 26 DRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGK-GSYSFGHAIAYIAYTVPRRAYT 84 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S +L ++ + L + Sbjct: 85 LFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMVIGMGTGLMALTGETLGP 144 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L K D + W + + G +K L I D Sbjct: 145 WAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIMLILHDVRL 204 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + ++ A + D L++V + + + + + Sbjct: 205 YQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSRLDPAALA 264 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +E+++ + + + N E Q++ P+ ++A+ L A S Sbjct: 265 AGLAKPRNLSVHELVQSIEY-RRRNHLDARDFEGQYWSRWFYPINVLALCLAAIPFSFGL 323 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS GI + + + L L+P ++ + S + ++ Sbjct: 324 LRSGGMGKRTFLGILFALSFWMLQMFFERIASVLKLNYQIFYLLPPMVMLCGSYWLFRRQ 383 >gi|66044344|ref|YP_234185.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|63255051|gb|AAY36147.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|330969233|gb|EGH69299.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aceris str. M302273PT] Length = 353 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 124/361 (34%), Gaps = 14/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILV-FVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 M L RY K L L L + LV + + + + Y+++ Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVS-LFAFIDEMGDISDT--YTLADALSYVMLTA 56 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +P L+ ++ L +SEL I RA G+SI +++ + ++L I VLV Sbjct: 57 PRRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLV 116 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +A E + +GD Q + W + + I + N + Sbjct: 117 GEYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGV 171 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDG 236 T D + + A A D +LK V + + +T ++ + Sbjct: 172 TRYRFDDQRHMQTSSFAKEANFKTDYWELKDVTTTHFNDGRTEVINTPVERWDVALSPQL 231 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 232 LSTVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIF 290 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS V G+ GF I ++ P+ A L+P +L+L Sbjct: 291 GPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGVLLLR 350 Query: 357 Q 357 + Sbjct: 351 R 351 >gi|114798132|ref|YP_760297.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114738306|gb|ABI76431.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 351 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 129/359 (35%), Gaps = 11/359 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY +L+ L + + L+ V+D +++ R+P Sbjct: 1 MTSRLSRYLSWLFLQRLLVTVFALVALLGVLDALSNADKL--PAGAGFEGQMRYMWLRLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +I+ F L+ ++ + +L R +ELV A GIS++ + + L + +I Sbjct: 59 ALFDRIVVFAFLLAALLTYASLIRRNELVAISAAGISVFGQMRTLIPVVFLTAVAAAFII 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + + + + D + + T Sbjct: 119 DTVGPPASRSLLAWL-------GPEALQEDAQVPEELWLSDGKFLIELKSMQAEELTGIT 171 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + ++ A+ A + L + ++ P + T P + Q Sbjct: 172 IFERNAEGAVVAITTAETARPADGGWALSGTGQRRFDGEPP-TDMTFWTSPQTPESLQLL 230 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + +I +S S + E ++PL V L+A V + R Sbjct: 231 LSPPRDLAISNLIA-LSEMRGSGSRPSGAYELWALNRFLLPLTAVGFLLLAVPVMQVYGR 289 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + I VA G+ GF + I+K+ ++G + P+ A +P++ S+ + L++E Sbjct: 290 RSNADIAVAAGVAVGFFYMVVDGILKTLAENGSISPILAVALPILALFLGSMWLALERE 348 >gi|257452882|ref|ZP_05618181.1| hypothetical protein F3_07434 [Fusobacterium sp. 3_1_5R] Length = 361 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/362 (11%), Positives = 109/362 (30%), Gaps = 6/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K +LK Y L + + + + ++ + S + + +P Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYV-NEGQLSPGQIPLFIGNLLPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II + P L+ ++ + E++ + GI +L+ + S L+ + + + Sbjct: 60 IIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLND 119 Query: 122 PIATSGEKIGIDLI--QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +L + ++ ++ + + + + E Sbjct: 120 RVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEVL 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK--MDGF 237 K + + + Y ++ + + F Sbjct: 180 DMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEYF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + +KK + ++ P ++ + ++ Sbjct: 240 ISLSNIVPKQQTIAELKKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLALGSH 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + R + + I G+ Y + ++ G +G L P + IP +L ++ + + + Sbjct: 300 YVR-GMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYFMRR 358 Query: 358 KE 359 E Sbjct: 359 AE 360 >gi|319789792|ref|YP_004151425.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] gi|317114294|gb|ADU96784.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] Length = 354 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 140/361 (38%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY F +K L + L VID N + + S A R+P Sbjct: 1 MIKKLDRYVFSEGVKFFFLTLTTFLTLFAVIDFVSHFNMVSK---VGASGAAAYILGRLP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L ++IP TL+ +V + TSEL ++RA+GIS ++ P V+ +L + +V V Sbjct: 58 LYGVRVIPIATLIATMVTLSRFSETSELTVARALGISTYRFSAPLVILGVLASVASVAVQ 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +G K ++ + + W + F ++LP+N E Sbjct: 118 ETLLPAGLKRATEIALKAGEEVTNGPQKVPGVWFKDRAGDFVFFW---ELLPKNKRAERV 174 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR-IPIDKNSTTLNIPIKMDGFQ 238 + I + + + + L++V + +K + +N+ + + Sbjct: 175 SIIKVKDFSPTGRIDAEEAIYKGGGRWLLREVFVRDFKELKSTEKETLPINLGVSVKELL 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ + +K N + + Y + + L+ V +I + Sbjct: 235 LSVNNPEAMGLLELFLTIKRLSKLN-YDTNYLRVELYSKLALGLLPVITAIIGIPFGVYN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + V ++ +++ S GKS +L P+ AA P++L ++ + +L + Sbjct: 294 PRNKK-GYTVLLAAIIVVSMWITVSLFLSLGKSEVLPPLYAAFAPLLLFGAVGLFLLGRV 352 Query: 359 E 359 E Sbjct: 353 E 353 >gi|28198044|ref|NP_778358.1| hypothetical protein PD0108 [Xylella fastidiosa Temecula1] gi|182680671|ref|YP_001828831.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|28056104|gb|AAO28007.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182630781|gb|ACB91557.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|307579132|gb|ADN63101.1| permease YjgP/YjgQ family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 368 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 115/360 (31%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + T L L + L V +G+ +YS A VP Sbjct: 9 DRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGK-GSYSFGHAIAYIAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S +L ++ + VL + Sbjct: 68 LFPTAAVIGMLLGLGQLAATSELTALRALGVSRTRLSLSVMMMIGMGTGLMVLTGETLGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L K D + W + + G +K L I D Sbjct: 128 WAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIMLILHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQ 238 + ++ A + D L++V + +S + Sbjct: 188 YQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFDSLPWRSRLDPAVLA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +E+++ + + + N E Q++ P+ ++A+ L A S Sbjct: 248 AGLAKPRNLSAHELVQSIEY-RRRNHLDARDFEGQYWSRWFYPVNVLALCLAAIPFSFGL 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS GI + + + L L+P ++ + S + ++ Sbjct: 307 LRSGGMGKRTFLGILFALSFWMLQMFFERIASVLKLNYQIFYLLPPMVMLCGSYWLFRRQ 366 >gi|301310576|ref|ZP_07216515.1| putative membrane protein [Bacteroides sp. 20_3] gi|300832150|gb|EFK62781.1| putative membrane protein [Bacteroides sp. 20_3] Length = 361 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 4/353 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K +L T ++ + + + V D+NE ++ + +P Sbjct: 6 KRIDWYIIKQFLGTYVFAIALIISISVVFDINEKIDKFLNPDVPLKAIIVDYYLNFIPYF 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P T + I L SE++ A G+S +L+ P+ V + ++ I T ++ Sbjct: 66 ANLFSPLFTFIAVIFFTSKLADRSEIIAMLASGMSFRRLMLPYAVSATIIAIVTFILNAY 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTS 181 I + ID ++ N + E F Sbjct: 126 IIPPANETRIDFQNKYIRNKKVDYVKNAQLEIEPGIIAYFDSYDARSNMGYRFSLEHFED 185 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K L ++ + + TTL I F Sbjct: 186 KKLISRLTAKSIKYDSLYQWTVIDYMIRDFDGMREHIFQGSRKDTTLTIV--PSDFLISV 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ ++ K I + + +++ + +T I AS+S + Sbjct: 244 NDCETMTTPELNTYINRQKKRGIGNIQTFQIEYHKRFATIMAAFILTSIGASLSSRKIKG 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + F +T+ +F +G + P AA IP I+ ++I + Sbjct: 304 GMGMNIGIG-LALSFSYILFMTVTSTFAINGYVSPAVAAWIPNIVYTFIAIFL 355 >gi|86133725|ref|ZP_01052307.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] gi|85820588|gb|EAQ41735.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] Length = 363 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 57/360 (15%), Positives = 122/360 (33%), Gaps = 6/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGA-VLAATRVP 60 IL Y K +L T L+ LL + + ID+ E + E + + + Sbjct: 1 MKILDWYILKRFLVTFLFTLLILIPIAIAIDIAEKIDNFLEHQDLGFLQIVDEYYINFII 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +P + I+ L+ +E++ IS + L P+ +G+ L+ + ++ + Sbjct: 61 YYANTFMPLALFIAVILFTSKLSNNTEIIAINNAKISFTRFLFPYFIGATLITLLSLAMN 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + S KI + N + + +I + +++ DFT Sbjct: 121 HFVVPSSSKIRKKFELTYIKNKRQNQEFKYISDFSLQLTDSTYIFIRNFNTQSNAGYDFT 180 Query: 181 SITIDK-KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDG 236 S D K D + L+ + N Sbjct: 181 SEVYDGLTMKSKLVADNIRYNDKDSTFALQNWRLRKIYDDKDSIFSGNKIDTVFNFTPRD 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S E++K + S K + + +F+ +P+ +T+IA +++ Sbjct: 241 LIYKSALSQEMPSDELLKFIEISEKRGVKNLNAYLVEFHKRTSLPIASYVLTIIAVALAF 300 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + +A G+ F+ ++ I + G + +P I S+++ + L Sbjct: 301 R-KRRGGTGVNLAIGVGMMFIYVFLLKISEVLGAVAGVNSFIYVWMPNIFFGSIALYLYL 359 >gi|330752461|emb|CBL87411.1| predicted permease YjgP/YjgQ [uncultured Flavobacteria bacterium] Length = 357 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 107/355 (30%), Gaps = 2/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I Y K YL T LL + + ++L E +++ E A Sbjct: 1 MKIFDWYILKRYLLTFFLMLLLFIPIGITVNLAEKIDRILENK-VPFDEVAAYYFDFTIY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + GIS ++ L P+ +G ++ I + + Sbjct: 60 FANLLFPLFLFLSVIWFTSKLANNTEVIAFLSSGISFFRFLRPYFIGGTVIAIVALFLGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A K + ++ N +S I + + + N+ + Sbjct: 120 YWAPKASKGYNEFTYKYLSNKKAVQSQYIYQQINDDEYIYVSNFDSNSMRGNNFTLEHFD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + I K + + Sbjct: 180 GNKLEYKIHASAIRFIEKDSNYRLSNYYLRYIGKDHDSIIFKRRIDTLLGFDLLDLTPPK 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + +E+ + + R + Y +P+ + +T+IA +VS R Sbjct: 240 YVAETLTVHELSDFIKREEARGSSNINRYKVVQYKKWSLPVSVYILTIIAVAVS-SIKRR 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + +A+GI + + + PV A P + L+I +L Sbjct: 299 GGMGVNLAFGIVIAMVYVFFDKVFGVMAEQSDFPPVVAVWFPNFIFGILAIYLLF 353 >gi|15807418|ref|NP_296151.1| hypothetical protein DR_2431 [Deinococcus radiodurans R1] gi|6460246|gb|AAF11972.1|AE002073_2 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 420 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 120/373 (32%), Gaps = 18/373 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY L + L ++L + L E+ + S A L A VP Sbjct: 6 MKLFERYVLSEILPPLVGALAAVILLFLLAGLEEVIGPLLAK-GASPLLVARLLALSVPE 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + +P + ++ L SE+ + A G+ + +LL P ++ ++ + + + L+ Sbjct: 65 ALSRALPIGLMFATLLGLSRLAADSEIKGALAGGVPVTRLLRPVLLLALGITVLSFLIGE 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQK---SDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + + + QQ + + + + + D Sbjct: 125 GLRPKAYSESLRVQQQIVFDNPRVTGLGQAGEGGQTLVLTDALNRAISVGEVRPGGELRD 184 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID------KNSTTLNIPI 232 + + A+ + L+ + + L + Sbjct: 185 LRIVAMQAGEAPREVITAESGTLVPGSNVLELRRGQRVTYQNARPVTVLSFENGRLPVQD 244 Query: 233 KMDGFQKFSEQFA------SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 F K + E+ + + + T F+ I PL +A Sbjct: 245 VQANFAKDERSSTAQAGLVNLPLRELWDRTEAFRQQKVPAPAEF-TAFHRKIAEPLAALA 303 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 + A S+++ R + + I F Y ++ + G++G L PV AA P ++ Sbjct: 304 LAFFAVSLAVYSFR-GSLNLGFTWAILLAFAYYATWSVFRIMGENGGLPPVVAAYAPDLI 362 Query: 347 TISLSILILLQKE 359 + + +L + E Sbjct: 363 AVVAGLALLWRSE 375 >gi|262280664|ref|ZP_06058447.1| permease YjgP/YjgQ family protein [Acinetobacter calcoaceticus RUH2202] gi|262257564|gb|EEY76299.1| permease YjgP/YjgQ family protein [Acinetobacter calcoaceticus RUH2202] Length = 356 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 120/354 (33%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K + IL + ++ P+Y+ + + P + Sbjct: 6 IVAKYVTKTTALAMFGTTVVLSILQVLFTYLGELGEL--KPDYNAWQALIYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ +L +SEL++ R+ GIS+W+++ + ++LL I + + + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSAGISLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + W + I + ++ DF Sbjct: 124 IPYTNEKAQSVKS--HRSVAALGEVKGYWSREGQRFIYIDYANSQGNLKDIQVVDFDQNY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + K + + I D + +L + ++ + Sbjct: 182 YLQSLINAQQGQFVKNGQWALKKAEQMDILAAGNAIKTDHDEQSLALALQPKYVHMVTLD 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++I M + ++ + + F+ + P L+A+ L+A S R Sbjct: 242 PEDLSPSQLISFMRYMDEYSQVPKT-YQLAFWQKVASPFSLIALVLVACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F G Y + + P L+P++L +L + Sbjct: 301 MGFRLVIALFIGLSFYYLQDFLGYASLVYSPSPAWFVLVPILLMFGAGSYLLYR 354 >gi|19704365|ref|NP_603927.1| hypothetical protein FN1030 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714617|gb|AAL95226.1| Hypothetical membrane-spanning protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 363 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 117/364 (32%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLAGGEIFDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ +F V Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLFVFFVN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ + + + E Sbjct: 120 NSIYTKSLAKINFYRRGEIDETLKLPTTKENAFFINNTEGYLYLMGKINRETGLAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMD 235 T K K I + +K V Y + + L + Sbjct: 180 VKFNTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVETKETTAKIEYKSNLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + + P + I SVS Sbjct: 240 FIKASAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GIL P A+ +P IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVVAGYGYYLVSGAFEAMSLNGILNPFIASWVPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|304321348|ref|YP_003854991.1| putative permease [Parvularcula bermudensis HTCC2503] gi|303300250|gb|ADM09849.1| putative permease [Parvularcula bermudensis HTCC2503] Length = 426 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 122/367 (33%), Gaps = 17/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY FK L L +++ + + + M E S+ + +P ++ Sbjct: 48 LLDRYIFKQVAVPFLLILACTTAVIWFTQMLQRVDLMVEDGG-SLLSFLRVTVLLIPSLV 106 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+PF + SEL RA G S +L P +V SIL + ++ + + Sbjct: 107 GVILPFAVFAAVLYALNLFVTDSELPAMRAAGASRLRLARPVLVLSILAALVSLYINADL 166 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + + + ++Q + + ++ + +S Sbjct: 167 QPKTYRQLRQTVEDVRSDIAQSLIREGVFVQPTAQITVFAQEVRPGGQFIGLFINDSSDP 226 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK---- 239 + K R +A + ++ V+Y+ + + + F + Sbjct: 227 RETKTYTAERGLFQMAETGPKLLLIEGTVQYRDRETGRVDVFRYIETAVDLAAFDRGSGG 286 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S R+ +++ S+ S R + + PL A+ ++A L Sbjct: 287 RSLDETERTVSQLLNP-DLSDPSIARLADRYRAAGHARLATPLYCPALAVVALCFLLSPP 345 Query: 300 -RSNQPRIIVAYGIFSGFML----YTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V I +L + + + G L + P+ + + S+ + Sbjct: 346 ISRRGYGQQVLMAIGCALLLRTGGFLLQGLAADLGALNGLQYIV----PLAVILLGSVYL 401 Query: 355 --LLQKE 359 L++ E Sbjct: 402 SGLVRLE 408 >gi|152998005|ref|YP_001342840.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] gi|150838929|gb|ABR72905.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] Length = 353 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 127/362 (35%), Gaps = 14/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNY-SISRGAVLAATRV 59 M I +Y L L + + L F + E ++ + S+ + R+ Sbjct: 1 MTKI-DKYIASSVLWAFLIVAVVLLGLDFALTFIEQIKKVNDNYTIQSLLQVI---LFRL 56 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + + IP +L+ ++ L TSEL + RA G+ IW++ +L+ + + V Sbjct: 57 PGKLAEYIPVASLIGTLMGLGTLAATSELTVMRAAGMPIWRIGFAACQPILLVSLLGMGV 116 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +A E+ + + W++ N I Sbjct: 117 SEFVAPVAEQKANLIEKFKGQESGAFSLTGGVWLKADNDFVYID-----AADAVGTLYGI 171 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDG 236 + D + + +L V E + ++K S N+ I + Sbjct: 172 QIFSPDGQQLKHIITATSAQHTEGSQWQLNNVTETIFAPDHVEKKSLEHANWNVSITPEH 231 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S++ + S ++ ++ + + E +F+ + P+ +A+ L+A S Sbjct: 232 LFLASQEPDALSLSQLKNYQTYLKQQ-KLDGAQYELEFWITALRPIASLALVLVALSSVF 290 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS+ + G+ G + + + P+ IP+I+ + I+++ Sbjct: 291 GPLRSSTMGGRIFTGVIIGLAFQNALNLFGRMSVAINFPPIIGVSIPIIICLLAGIILVR 350 Query: 357 QK 358 ++ Sbjct: 351 RR 352 >gi|226951740|ref|ZP_03822204.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|294648982|ref|ZP_06726430.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226837530|gb|EEH69913.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|292825117|gb|EFF83872.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 356 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 123/354 (34%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ ++ K + L L L + + PNY+ + + P + Sbjct: 6 IVAKHVTKTTVLAMLGTTLVLSFLQVLFTYLGELGSL--KPNYNAWQAFLYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ +++ L SEL++ R++GIS+W+++ + ++LL + + + + Sbjct: 64 YEILPVAALIGSVLGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFTLSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +Q + W + I + N DF Sbjct: 124 IPYTNEKAQSIKKQ--RSVAALGEVKGYWSREGQRFTYIDYANSQGQLRNIQSIDFDENY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + + + Q I D + L + ++ + Sbjct: 182 RLQSFVTAEQGNFVKDGQWTLEQSHQIDLLPQGNAIKTDHANQALALALQPKYVHMVTID 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++I M + + + E F+ + P L+A+ LIA S R Sbjct: 242 PEDLSPTQLISFMRYMEEYSQVPKT-YELAFWQKVASPFALIALVLIACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F+G + + M P L+PV+L + +L + Sbjct: 301 MGFRLVIALFTGLGFFYLQDFMGYASLVYAPSPAWFVLLPVVLMFMIGSYLLYR 354 >gi|116747639|ref|YP_844326.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] gi|116696703|gb|ABK15891.1| permease YjgP/YjgQ family protein [Syntrophobacter fumaroxidans MPOB] Length = 423 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 117/362 (32%), Gaps = 6/362 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+RY K + L+G +++ L ++ ++ ++++ L A +P Sbjct: 33 MKMTLYRYLIKEQMVPLGVCLMGVSLVLITGRLFQLL-KVLFTSSFTLGDLMALVALAMP 91 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ +P +L+ ++ F LN +EL+ RA GI Q V + + + + + + Sbjct: 92 KLMLFALPMASLLGVLLAFVRLNSDNELIALRAAGIGFHQFFPAVVSLLLGVTLISFVNM 151 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + K ++ +G ++ F Sbjct: 152 IFVIPPTGKAFEVKLRSMARSGLPVLMKEGTFITAIPKLTFFFQSVNPTELSVRGIFVQD 211 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLK--KVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + I+ + ++ + K + + + + Sbjct: 212 RREEKVRLAIVAESARIVYQRDSNHLTFKIANGSITRVADDMKNAQAVSFKAYDLSLSLD 271 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYR--AETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + + + +F+ + P + + LI A + Sbjct: 272 ELIGSARGSKMNKREMTLRELYRVIVEKTGDVGHALEFHQRLAFPSGCLLLGLIGAPLGA 331 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 F + + + G+ Y I++ K G++ ++ P A P +L I+ S + Sbjct: 332 VFRQRGRIA-GITIGLVVFLAYYVILSAGKGLGENHLVHPFLACWAPNLLCIAASFYLWR 390 Query: 357 QK 358 + Sbjct: 391 KM 392 >gi|293610040|ref|ZP_06692341.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827272|gb|EFF85636.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124205|gb|ADY83728.1| hypothetical protein BDGL_003142 [Acinetobacter calcoaceticus PHEA-2] Length = 356 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 122/358 (34%), Gaps = 13/358 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K + IL + ++ P+Y+ + V P + Sbjct: 6 IVAKYVTKTTALAMFGTTVVLSILQVLFTYLGELGEL--KPDYNAWQALVYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ +L +SEL++ R++G+S+W+++ + ++LL I + + + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSVGVSLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + FI + ++ + Sbjct: 124 IPYTNEKAQSVKSHR------SVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQVVDF 177 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDGFQK 239 I N + LKK + I D +L + ++ Sbjct: 178 DQNYYLQSLINAQQGQFIKNGQWALKKAEQMDILAAGNAIKTDHEEQSLALALQPKYVHM 237 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + S ++I M + ++ + + F+ + P L+A+ L+A S Sbjct: 238 VTLDPEDLSPSQLISFMRYMDEYSQVPKT-YQLAFWQKVASPFSLIALVLVACSFIFGPL 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +F G Y + + P L+P++L +L + Sbjct: 297 RQQSMGFRLVIALFIGLSFYYLQDFLGYASLVYSPSPAWFVLVPILLMFGAGSYLLYR 354 >gi|260494012|ref|ZP_05814143.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|260198158|gb|EEW95674.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] Length = 363 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 117/364 (32%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVG-GEILDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ + + Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGEINRETGVAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMD 235 T K K I + +K V Y + L + Sbjct: 180 VKFDTEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVDTKETITKTEYKSKLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + ++ P + I SVS Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKSIGE-DTRIYLSELAKRYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GIL P A+ IP IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVIAGYGYYLVSGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|226946454|ref|YP_002801527.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226721381|gb|ACO80552.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 356 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 129/363 (35%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY L + L +DL + +G+ Y + + + +P Sbjct: 1 MRILERYLLGNLLLGFAAAAALLLPLFSTLDLVGELDDIGD-AGYRLGQALQVTLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ PFI L+ I L+ + EL + R G+S ++ ++ LL + Sbjct: 60 RAVELGPFIALLGGIAALGQLSMSQELSVLRTAGVSATRIGLTALLAGTLLAGGLGALDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ I L K + DK D W + I A +P + F Sbjct: 120 FVASPLQQKAIKLRAYAKPDNDK---DDSIWARKDGQVVRIGSLATGRVPNHLEIFRFDE 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVV---EYQYGRIPIDKNSTTLNIPIKMDGFQ 238 ++ + R + I +L V G + Sbjct: 177 SNRLQEYILADRAE----IQPGGLWQLHDVRLKRWSDEGESVERLERLEWRAILPDSRLD 232 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + AS S ++ + F + + E + + +P++ +AM L A + Sbjct: 233 EVTLPPASLSARQLRGYVHFLQNTGQPSI-QFEIALWQKLGVPILTLAMILFALPFTFAP 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS +A G G ++Y + S G+ L + L+P ++ + +++ ++ + Sbjct: 292 VRSTGLGSRLALGAVMGLLVYIGNESLVSLGQLLKLNAMLVGLLPALVLLGMALALVRRF 351 Query: 359 EDG 361 + G Sbjct: 352 DRG 354 >gi|332307892|ref|YP_004435743.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175221|gb|AEE24475.1| permease YjgP/YjgQ family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 368 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 121/357 (33%), Gaps = 10/357 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY K +K+ L M + + ++ + S A +P++ Sbjct: 2 LIFRYLVKETVKSQTAVFLVLMAIFITNKFVRVLSEASN-GDIPASLVLGFLALSMPVLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++ L SE+ + RA GIS W + +V ++++ + T + + Sbjct: 61 SLILPLSLFLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLVLAVIMALITGAMTLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG---AKKILPENHIWEDFT 180 A + L +Q + + Q +N + IF+ + Sbjct: 121 APMSVEREYQLEEQAGADTGLTTLIPGRFQQTANEKAVIFVHEIGNDSEPLKRVFMAQHD 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + T + +++ K L + + L QY +K+ + + Sbjct: 181 TTTDSQNVHLVYAKQGGLRELPDGSETLVLGDGIQYEGTLGEKDYRVVEFGEYQIQIAEQ 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + R F++ S A + + IPL L + +IA +S R Sbjct: 241 EAEQKRRKLSAYTTAQLFNDPS-----IDAIAELQWRFAIPLSLFFLVIIAVPLSAADPR 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + + ++ + + G + P+ + + + ++ + Sbjct: 296 QGRFGK-MFPALMLYLGYFLLLLAGRKVLEDGKIPPMLGLWWVHAVIGVIGLALIFK 351 >gi|299771879|ref|YP_003733905.1| hypothetical protein AOLE_18250 [Acinetobacter sp. DR1] gi|298701967|gb|ADI92532.1| hypothetical protein AOLE_18250 [Acinetobacter sp. DR1] Length = 356 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 123/358 (34%), Gaps = 13/358 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K + IL + ++ P+Y+ + + P + Sbjct: 6 IVAKYVTKTTALAMFGTTVVLSILQILFTYLGELGEL--KPDYNAWQALIYVLWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ +L +SEL++ R+ GIS+W+++ + ++LL I + + + Sbjct: 64 YEILPISALIGAVIGLGSLATSSELIVMRSAGISLWRIVGWVMRSALLLIILSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + FI + ++ + Sbjct: 124 IPYTNEKAASVKSHR------SVAALGEVKGYWSREGQRFIYIDYANSQGNLKDIQVVDF 177 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDGFQK 239 + + + LKK + I D + +L++ ++ Sbjct: 178 DQNYYLQSLINAQQGQFVKDGQWALKKAQQMDILAAGNAIKTDHDEQSLSLALQPKYVHM 237 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + S ++I M + ++ + + F+ + P L+A+ L+A S Sbjct: 238 VTLDPEDLSPSQLISFMRYMDEYSQVPKT-YQLAFWQKVASPFSLIALVLVACSFIFGPL 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +F G Y + + P L+P++L +L + Sbjct: 297 RQQSMGFRLVIALFIGLSFYYLQDFLGYASLVYAPSPAWFVLVPILLMFGAGSYLLYR 354 >gi|257466753|ref|ZP_05631064.1| hypothetical protein FgonA2_04885 [Fusobacterium gonidiaformans ATCC 25563] Length = 361 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 40/362 (11%), Positives = 109/362 (30%), Gaps = 6/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K +LK Y L + + + + ++ + S + + +P Sbjct: 1 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYV-NEGQLSPGQIPLFIGNLLPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II + P L+ ++ + E++ + GI +L+ + S L+ + + + Sbjct: 60 IIINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLND 119 Query: 122 PIATSGEKIGIDLI--QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +L + ++ ++ + + + + E Sbjct: 120 RVYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEVL 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK--MDGF 237 K + + + Y ++ + + F Sbjct: 180 DMSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEYF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S + +KK + ++ P ++ + ++ Sbjct: 240 ISLSNIIPKQKTIAELKKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLALGSH 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + R + + I G+ Y + ++ G +G L P + IP +L ++ + + + Sbjct: 300 YVR-GMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYFMRR 358 Query: 358 KE 359 E Sbjct: 359 AE 360 >gi|146328919|ref|YP_001210037.1| hypothetical protein DNO_1153 [Dichelobacter nodosus VCS1703A] gi|146232389|gb|ABQ13367.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 349 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 118/357 (33%), Gaps = 9/357 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + R+ + + L+ + + F++ E + +G NY + VP Sbjct: 1 MITLYDRHIARIITAHIIIVLIFLLGIDFLVQSAEESDNIG-RGNYHFWLMLSILLLNVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + +P LV I LN+ EL + R GIS +L ++ + LG +++ Sbjct: 60 ARIVEFMPAAVLVGTITALGQLNKQQELTVIRTSGISRLRLSLSGLMIAFFLGCALIVLA 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + L N ++D W++ + I E + Sbjct: 120 EYGVAPAQNRAQWLHH-HALNTTAPQTDHGIWLRDGDNIVYIGAFQADGSLEKIRFYRPH 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ + + +++ + +T I + Sbjct: 179 EHDLEIQESQRATFMQTHWQLDDNR-----ALCIGSQSSMPITPTTHWQNRILPATIAQL 233 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + E+ F ++ ++ + + + I +P+ + M ++A R Sbjct: 234 MQLKNAYTLRELYTITGFLR-AHQLNDQQMSLKLWQRIFLPITTITMVILALPCVFNTRR 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + GI G Y + I+ G +AL+P+++ + +L + Sbjct: 293 DGN-GARLVIGILLGASYYVVQGIVTKLGLLLHWSTALSALLPILIFALPPLFLLTR 348 >gi|257126591|ref|YP_003164705.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] gi|257050530|gb|ACV39714.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] Length = 365 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 132/368 (35%), Gaps = 12/368 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + +++ + ++ + + E+ ++ + +P Sbjct: 1 MKIIDKYIYNSLILPSVFGISIFTFIMMLNVVMEVMERLF-ASDLPFISIIDYLFYAMPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ Q IP + ++V+ L+ T+E+V G+ +++++ P + ++L + + + Sbjct: 60 VLVQTIPMGAFLGVMLVYGGLSETNEIVAMEGSGVGLFRIIRPAFIFGVILTLIGLGLEL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K +Q + ++ ++ SN ++ ++ + ++F Sbjct: 120 YVNPRALKNINAQTKQILASRPSSLTEEKVFL--SNEEKGFGFYIDEVSNDKATAKNFLI 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM------D 235 I N A+ A ++LKKV Y + + + S + Sbjct: 178 INKRGDNPYPIVFLAEDAKFDPGIIRLKKVKGYAFDKTGSSQVSAEYQEQEIPISTFFRE 237 Query: 236 GFQKFSEQFASRSFYEIIKKMSFS--NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 Q+ + + E+ K + N +A+ + Y I+ PL + + Sbjct: 238 KKQELKKSRKEMNLKELEKFYKANIKNPEEKEAALKAQVEIYQRIIGPLASTFLCWLGVL 297 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +S+ RS + I + F + + K + A +P + L I Sbjct: 298 LSVGHRRSGR-GISFGISLIVIFGYIGMASYAKIMVLKNDVPASIAMWVPNFVLFILCIF 356 Query: 354 ILLQKEDG 361 ++K G Sbjct: 357 FSIKKYKG 364 >gi|256027206|ref|ZP_05441040.1| hypothetical protein PrD11_04301 [Fusobacterium sp. D11] gi|289765183|ref|ZP_06524561.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|289716738|gb|EFD80750.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 363 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 117/364 (32%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVG-GEILDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ + + Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNADGYLYLMGEINRETGVAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMD 235 T K K I + +K V Y + L + Sbjct: 180 VKFETEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVDTKETITKTEYKSKLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + ++ P + I SVS Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKSIGE-DTRIYLSELAKRYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GIL P A+ IP IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVIAGYGYYLVSGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|237744435|ref|ZP_04574916.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229431664|gb|EEO41876.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 363 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 116/364 (31%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDIYVSKYFIKFFLMNIIGFMGVFLLAQTFKIIKYINQGKLVG-GEILDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ + + Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNADGYLYLMGEINRETGVAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMD 235 T K K I + +K V Y + L Sbjct: 180 VKFETEISKPKEIITAKSAKFDTEENKWIFSNVNIYNVDTKETITKTEYKSDLYKDDPSS 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + ++ P + I SVS Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKSIGE-DTRIYLSELAKKYSFPFASFIVAFIGLSVS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GIL P A+ IP IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVIAGYGYYLVSGAFEAMSLNGILNPFIASWIPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|71275897|ref|ZP_00652180.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|170729352|ref|YP_001774785.1| hypothetical protein Xfasm12_0116 [Xylella fastidiosa M12] gi|71163274|gb|EAO12993.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|167964145|gb|ACA11155.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 368 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + T L L + L V +G+ +YS A VP Sbjct: 9 DRYVARAVVATVLLTWLVLLGLDVVNGFASEVRDIGK-GSYSFGHAIAYIAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S +L ++ + L + Sbjct: 68 LFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMVIGMGTGLMALTGETLGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L K D + W + + G +K L I D Sbjct: 128 WAQAQADILKASAKYKSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIMLILHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + ++ A + D L++V + + + + + Sbjct: 188 YQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSRLDPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +E+++ + + + N E Q++ P+ ++A+ L A S Sbjct: 248 AGLAKPRNLSVHELVQSIEY-RRRNHLDARDFEGQYWSRWFYPINVLALCLAAIPFSFGL 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS GI + + + L L+P ++ + S + ++ Sbjct: 307 LRSGGMGKRTFLGILFALSFWMLQMFFERIASVLKLNYQIFYLLPPMVMLCGSYWLFRRQ 366 >gi|114326914|ref|YP_744071.1| hypothetical protein GbCGDNIH1_0250 [Granulibacter bethesdensis CGDNIH1] gi|114315088|gb|ABI61148.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 355 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 109/358 (30%), Gaps = 5/358 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M RY LK + L +++ + +G+ Y + A+ A +P Sbjct: 1 MKK--ERYAAMAALKAVGLSAIALTALFSLLEFVQQLASVGQ-GRYGMLDAAIYVALTIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + Q+ P L+ ++ L R EL R +G+S +++ + SI L + L+ Sbjct: 58 YRLLQVFPVSMLIGTLLGLGGLARNGELTALRGLGMSERRIILSVIAFSIPLMVILFLMA 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ + +S W +I P N F Sbjct: 118 QFVIPPAQREAQTWRSNALPDTTALRSQDSFWAYGDRHFLNIQHFEHHDEPYNIDIFSFA 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D + L + + + Q Sbjct: 178 PDGELHRYLHAQSADILPNDRWVLHDVLSR-TLVDGQLRKAHLDRLDWTPFLTPQQTQFL 236 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + + + + R E + + I IPL ++AM + A R Sbjct: 237 RLRPDAMPPLALWRYVHSLKQRG-LQAIRYEQELWAKISIPLTMMAMVIAATPFVFGGGR 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +A G G + + I L P AL P +L + L I + ++ Sbjct: 296 VQNTGAFIALGAAIGVVFTLVQQISGHLDVLLNLNPAVTALTPPVLLMWLGIDLFYRR 353 >gi|42523904|ref|NP_969284.1| YjgP/YjgQ permease [Bdellovibrio bacteriovorus HD100] gi|39576111|emb|CAE80277.1| predicted permease YjgP/YjgQ family [Bdellovibrio bacteriovorus HD100] Length = 367 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 117/355 (32%), Gaps = 7/355 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y F L + + LL + ++ + + + + ++ A + + ++ + Sbjct: 12 YIFFEMLPSFILGLLVFVSIILMFQVLR-LTEFALVHGVAMKTIAEIIGYVIISMLPILF 70 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P L ++ + L++ SE+V +A G+ + LL P ++ + L+G+ + + IA G Sbjct: 71 PMALLFSVLLTYGRLSQDSEIVAMKASGLPMGTLLLPALILATLVGVISAQMSFNIAPWG 130 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPW-MQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + L + + + + ++ Sbjct: 131 NRQFEVLYSRLANTKAAAIIKEGTFAEGFFDMVIYANEVNTDKGLLKKVFIYDEKNGDVP 190 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPI----KMDGFQKFSE 242 I + L ++ + + R + + + ++ ++ Sbjct: 191 LTIIAKAGEIVPDPTRPGHEILLQLNQGEIHRQAKTHTKISFDTYDVRFSEPQNIEEKAK 250 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S + E+ ++ + + +++++ I ++ + +I + +R Sbjct: 251 SPPSLTLEEVRNRLKE-DIKDKEVRRTLQSEYHKRWAISVLCIVFAMIGVGLGTTTNRRA 309 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + + + +SG L A P +L +L + L + Sbjct: 310 AKAGGMILCIGIIIFYWILYVAAEGAARSGALPAALAIWTPNVLFAALGVETLRR 364 >gi|326336103|ref|ZP_08202275.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691612|gb|EGD33579.1| permease YjgP/YjgQ family protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 359 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 109/358 (30%), Gaps = 4/358 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K Y T L + + ++D E +M + + A V Sbjct: 1 MKIIDRYILKRYFLTYSALFLMFIPIGILVDFAEKNQKMTD-NHAPTEAIIKYYANFVIH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E+V + GIS + L P+ G+ +L +F +++ Sbjct: 60 FANILFPIFLFLSVIWFTSKLAEKTEIVAMLSSGISYNRFLRPYFYGATILSVFVLIMGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + K + N + + + Sbjct: 120 FVVPYSSGVYNEFYGTYLSPNLYSKGSRLYNQVNKNEYIYVSSFDANNNQGSDFVLERFD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 ++ I + K Sbjct: 180 GLKMTDKITASNIQWIENDSIKTYRLSYYTHRKVGEFDDIYEQVIQKDTLLNFKTTDLLP 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +++F+E+ K ++ + + E +Y + +T+I +VS Sbjct: 240 IEYAAETKNFFELNKFIAEERQKGSPNIRIYELVYYRRWAAIFNVFILTIIGVAVSSVKK 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +A+G+ GF I + + P+ A +IP + L++ ++ + Sbjct: 300 R-GGMGVNLAFGVLIGFSYVFFERIFGIMAEKSGITPLMAVIIPNAMFALLAVYMIRK 356 >gi|262373935|ref|ZP_06067212.1| permease YjgP/YjgQ family protein [Acinetobacter junii SH205] gi|262310946|gb|EEY92033.1| permease YjgP/YjgQ family protein [Acinetobacter junii SH205] Length = 356 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 122/354 (34%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ ++ K + L L L + + PNY+ + + P + Sbjct: 6 IVAKHVTKTTVLAMLGTTLVLSFLQVLFTYLGELGSL--KPNYNAWQAFLYVMWGAPRYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ +++ L SEL++ R++GIS+W+++ + ++LL + + ++ + Sbjct: 64 YEILPVAALIGSVLGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFVLSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +Q + W + I + N DF Sbjct: 124 IPYTNEKAQSIKKQ--RSVATLGEVKGYWSREGQRFTYIDYANSQGQLRNIQSIDFDQNY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + + Q I D L + ++ + Sbjct: 182 RLQSFITAEKGQFVKDGQWTLQDSHQVDLLAQGNAIKTDHAQQALGLALQPKYVHMVTLD 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S +++ M + + + E F+ + P L+A+ LIA S R Sbjct: 242 PEDLSPSQLVSFMRYLEEYSQVPKS-YELAFWQKVSSPFALIALVLIACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F+G + + + P L+P++L + +L + Sbjct: 301 MGFRLVIALFTGLGFFYLQDFLGYASLVYAPSPAWFVLLPIMLMFGIGSYLLYR 354 >gi|313206715|ref|YP_004045892.1| permease yjgp/yjgq family protein [Riemerella anatipestifer DSM 15868] gi|312446031|gb|ADQ82386.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer DSM 15868] gi|315023785|gb|EFT36787.1| hypothetical protein RAYM_00180 [Riemerella anatipestifer RA-YM] gi|325335845|gb|ADZ12119.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer RA-GD] Length = 364 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 129/363 (35%), Gaps = 8/363 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K +L T ++ L+ I+V V+D+ + + + Sbjct: 1 MKIIDAYIIKKFLGTLVFMLVLLSIIVIVVDIQAKAPNIEKSGYTVGDFLLHFYPFWMIY 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I + + + I + +E+V + G S + P+ + ++ + +F +++ + Sbjct: 61 LILTFMSILVFISVIYFSSRMADNTEIVAIVSSGASFHRFARPYFMVAVGIALFMLMLNH 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +L+ + +++ + + + ++ + D+ Sbjct: 121 FALPWANVKKNELMVFTESQVRQEEKNRSVAIS-AQMSPTEYVFIGSYHRKEARGSDYLY 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT------LNIPIKMD 235 DK NK+IH+ D K Y+ + + + + Sbjct: 180 QKFDKNNKLIHQIRGDYVSWDEKKQAFSITSFYEKKAGKNETEKLSNGTQTYQSFGYPPE 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 +++ E++K ++ + + + +P+ ++ +T++ +++ Sbjct: 240 ELFPDELLGENKTTPELVKFINREKIKGNGNINTYLNELHARTSMPVSIIILTILGLALA 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 E R + +A GI F+ +K S IL P A +P + L++L+ Sbjct: 300 SEKKR-GGIGVNLAVGIALAFVFIFSFEALKVVSSSKILTPFVAMWMPNFVFAPLALLLY 358 Query: 356 LQK 358 ++ Sbjct: 359 FRR 361 >gi|189219653|ref|YP_001940294.1| permease [Methylacidiphilum infernorum V4] gi|189186511|gb|ACD83696.1| Predicted permease [Methylacidiphilum infernorum V4] Length = 395 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 127/359 (35%), Gaps = 10/359 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL+RY FK +L L+ ++ LV + DL + + + +P Sbjct: 26 MKKILFRYLFKGFLFPLLFTIVAFCSLVIIADLFGSLEDFIQNK-ATPGQIFHYYLAYLP 84 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +I I+P +L ++ L+R EL+ +A G+ + ++ PF++ +L+ +F + Sbjct: 85 AVIIMIVPPASLFSSLYFLMQLHRHGELIAMQACGVPLQKIFTPFLIIGVLVTLFLAALQ 144 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ K N + + ++ +++ + ED Sbjct: 145 LGPGGNSQAKRDQILEDIKGNKTAVHALRGIIYKEEAEKR--IWYFRQLDFIKNQGEDVE 202 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN------IPIKM 234 + + K + + A A ++ +V Y ST Sbjct: 203 VVVQENSGKDLKKYFARKAAWKDNHWIFYEVNRIDYDSANNFLQSTYFETLPLVSWNTPP 262 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 ++ + E+ K ++ + QFY L+ PL ++ + LI + Sbjct: 263 RQMVALEKKPRDLNASELWKLINKPRSIQKTLLAPYQVQFYTLVAEPLTILVLLLIGLAE 322 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 S + V +F Y I + G+ + P A P++ S+ Sbjct: 323 GGRLSSRHPTA-GVFNALFILIAFYLIFHFFQILGQGSRIPPAVAIFSPLVAFTLFSLF 380 >gi|78486087|ref|YP_392012.1| permease YjgP/YjgQ [Thiomicrospira crunogena XCL-2] gi|78364373|gb|ABB42338.1| YjgP/YjgQ family protein [Thiomicrospira crunogena XCL-2] Length = 370 Score = 110 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 132/372 (35%), Gaps = 17/372 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M ++ RY + + TL L+ +I++ + ++ + +Y++++GA+ ++P Sbjct: 1 MMNLIERYLGRVLVSHTLLVLMVLLIILGFSEFMIQIGKVSD--DYTVAKGAMYTVLKLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +I P L+ ++ +L +EL I R G SI ++ + + +L + ++ Sbjct: 59 VYGYEIFPVALLIGTLIGLGSLANHAELTILRVTGWSIRRIFFAVMKSAFILWVCAAVIG 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + E + + S WM+ + + Sbjct: 119 EWVAPASESYAKKMRGEALHKNFSIGSTDDFWMRDGERYIHVGRVISDTQFYDVTIYSLE 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKV--------------VEYQYGRIPIDKNST 226 + ++ + ++ + +KV + D+ Sbjct: 179 DGQLSEQVHANTARYSEKEGQWVLYSLNRKVLDWQKMPALSPDRKTWKKLQFKQYDEVEG 238 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 +++P+ Q + ++ +SF ++ + F+ + +P +++ Sbjct: 239 AVDLPVSPTLLQTLHVETRYMGITDLFSYISFLEENG-LDAEAYKLAFWRKLAMPFVILG 297 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 M + + R + GI G + + I + L + A +P I+ Sbjct: 298 MIALVFPLIFGSQRQVSIGQRIFVGIMIGMSFHLLNQIFGNLSVVYQLPAIMGAFLPSIV 357 Query: 347 TISLSILILLQK 358 +S + L++ + Sbjct: 358 LMSAAFLLMRRL 369 >gi|237741964|ref|ZP_04572445.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229429612|gb|EEO39824.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 363 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 116/364 (31%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLAGGEIFDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ + + Sbjct: 60 KMFVETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGMAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMD 235 T K K I + I +K V Y + L + Sbjct: 180 IKFETQISKPKEIITAKSAKFDIDENKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + + P + I S S Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSAS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GI+ P A+ IP IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVVAGYGYYLVSGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|15836745|ref|NP_297433.1| hypothetical protein XF0140 [Xylella fastidiosa 9a5c] gi|9104926|gb|AAF82953.1|AE003867_7 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 368 Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 9/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + T L L + L V +G+ +YS A VP Sbjct: 9 DRYVARAVVATVLLTWLVLLGLDVVNAFASEVRDIGK-GSYSFGHAIAYIAYTVPRRAYT 67 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P ++ ++ L TSEL RA+G+S +L ++ + L + Sbjct: 68 LFPTAAVIGMLLGLGQLAATSELTALRALGVSRKRLSLSVMMMIGMGTGLMALTGETLGP 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHI---WEDFTS 181 + L K D + W + + G +K L I D Sbjct: 128 WAQAQADILKASAKYQSDMTGARYSGFWAREGEVFLNARSGEEKRLDSGGIMLILHDVRL 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + ++ A + D L++V + + + + + Sbjct: 188 YQLAADGRLQSMTRAARVEHHQDVWILQQVQRDTFSERGVQRETFHSLPWRSRLDPAALA 247 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S +E+++ + + + N E Q++ P+ ++A+ L A S Sbjct: 248 AGLAKPRNLSAHELVQSIEY-RRRNHLDARDFEGQYWSRWFYPVNVLALCLAAIPFSFGL 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 RS GI + + + L L+P ++ + S + ++ Sbjct: 307 LRSGGMGKRTFLGILFALSFWMLQMFFERIASVLKLNYQIFYLLPPMVMLGGSYWLFRRQ 366 >gi|255320990|ref|ZP_05362163.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262379920|ref|ZP_06073075.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255301954|gb|EET81198.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262298114|gb|EEY86028.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 356 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 112/354 (31%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ ++ K L + IL + + E Y+ + + P I Sbjct: 6 IVAKHVTKTTALAMLGATVVLSILQVLFTYLGELGNLKE--GYNAWQALLYVLWSAPRYI 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ L SEL+I RA GIS+W+++ + ++LL I + + + Sbjct: 64 YEILPISALIGAVLGLGTLASNSELIIMRAAGISLWRIVGWVMRSALLLVILSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + W + I + N DF Sbjct: 124 IPVTNERAESVKS--HRSVAQLGEVKGYWSREGQRFIYIDYANSQGNLRNVQVVDFDQDY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + ++ + + L + +K + Sbjct: 182 RLQALLNADSGQFEQDGQWRLQNSVQVDILEAGNAVQHIAEQQPLALALKPKYVHMVTLD 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++I M + + + + F+ + P L+ + LIA S R Sbjct: 242 PEDLSPSQLISFMRYMEEYSQVPKT-YQLAFWQKLASPFALITLVLIACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F G Y + + PV P++L +L + Sbjct: 301 MGFRLVIALFIGLGFYYLQDFLGYASLVYSPSPVWFVFFPILLMFIGGSYLLYR 354 >gi|146292282|ref|YP_001182706.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|145563972|gb|ABP74907.1| permease YjgP/YjgQ family protein [Shewanella putrefaciens CN-32] gi|319425582|gb|ADV53656.1| inner membrane component of lipopolysaccharide transporter, LptF [Shewanella putrefaciens 200] Length = 370 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 120/357 (33%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + K + LL + + I + + S L +P ++ Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLTIFISQHFVRILADASD-GEFPASLIVTLIGLNIPALV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V + +E+VI +G+S W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 E+ ++++ + + N + +F+ E D Sbjct: 121 TPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + T + + +++L V YQ D Q Sbjct: 181 PSDETGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + A +F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALTVTDLLK-------VESAEAVAEFHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + ++ + + ++ + + G++ + + + I +L Sbjct: 294 VRQGKFAKMLP-AVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIFLL 349 >gi|256845304|ref|ZP_05550762.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|256718863|gb|EEU32418.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 363 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 116/364 (31%), Gaps = 7/364 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDMYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLAGEEIFDYILNLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ + + Sbjct: 60 KMFVETAPLSVLLAGLITVSIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I T + D + ++ ++ + + E Sbjct: 120 NSIYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLYLMGKINRETGMAENIEV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMD 235 T K K I + I +K V Y + L + Sbjct: 180 IKFETEISKPKEIITAKSAKFDIDENKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSN 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E + E+ K + + P + I S S Sbjct: 240 FIRASAEDPRMLTIKELKKTIKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSAS 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ R + + + + +G+ Y + ++ +GI+ P A+ IP IL + + I + Sbjct: 299 SKYVRGGRTTMNLVICVVAGYGYYLVSGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFM 358 Query: 356 LQKE 359 + E Sbjct: 359 NRAE 362 >gi|187736000|ref|YP_001878112.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] gi|187426052|gb|ACD05331.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] Length = 396 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 43/366 (11%), Positives = 122/366 (33%), Gaps = 17/366 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y + + + ++ + D + + L + + +++P+I+ Sbjct: 9 ILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNL-DAPLMGTFRFYLSQLPMIL 67 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P+ L+ + L+ +SE+ G S+ ++ P ++G++ I+ + Sbjct: 68 NLILPYTLLLGTLWALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYFGIFGFHW 127 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT--S 181 A + + N + S + + + I + + Sbjct: 128 APNSALYRKLMFSSLSQNKNNHASQSTIYKNDAESRIWYLGNPPGIDSPGNPFRQVRVEQ 187 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP------------IDKNSTTLN 229 + K K D + ++ ++ Y + + + + Sbjct: 188 FSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQEYQTLKEH 247 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 P + + ++ + + + S +N + +T+++ I + +T Sbjct: 248 YPETPWQLISPNVRVDTQGTPALQELIK-SGTTNARYLRSLQTEWHVRIARIFSCIILTF 306 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 IA ++ F R + + +F + + + +G L A +P I+ Sbjct: 307 IAIPSAITFQRRSAMS-GIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPNIIYTI 365 Query: 350 LSILIL 355 ++I + Sbjct: 366 IAIRLF 371 >gi|330899516|gb|EGH30935.1| permease YjgP/YjgQ [Pseudomonas syringae pv. japonica str. M301072PT] gi|330975730|gb|EGH75796.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 353 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 125/361 (34%), Gaps = 14/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILV-FVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 M L RY K L L L + LV + + + + Y+++ Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVS-LFAFIDEMGDISDT--YTLADALSYVMLTA 56 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +P L+ ++ L +SEL I RA G+SI +++ + ++L I VLV Sbjct: 57 PRRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLV 116 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +A E + +GD Q + W + + I + N + Sbjct: 117 GEYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGV 171 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDG 236 T D + ++ A A D +LK V + + +T ++ + Sbjct: 172 TRYRFDDQRHMLTSSFAKEAHFKTDYWELKDVATTHFNDGSTEVVNTPVERWDVALSPQL 231 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 232 LSTVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIF 290 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS V G+ GF I ++ P+ A L+P IL+L Sbjct: 291 GPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGILLLR 350 Query: 357 Q 357 + Sbjct: 351 R 351 >gi|302188385|ref|ZP_07265058.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae 642] Length = 353 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 126/361 (34%), Gaps = 14/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILV-FVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 M L RY K L L L + LV + + + + Y+++ Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVS-LFAFIDEMGDISDT--YTLADALSYVMLTA 56 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +P L+ ++ L +SEL I RA G+SI +++ + ++L I VLV Sbjct: 57 PRRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLV 116 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +A E + +GD Q + W + + I + N + Sbjct: 117 GEYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGV 171 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDG 236 T D++ ++ A A D +LK V + + +T ++ + Sbjct: 172 TRYRFDEQRHMLTSSFAKEANFKTDYWELKDVATTHFNDGSTEVVNTPVERWDVALSPQL 231 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 232 LSTVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIF 290 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS V G+ GF I ++ P+ A L+P +L+L Sbjct: 291 GPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGVLLLR 350 Query: 357 Q 357 + Sbjct: 351 R 351 >gi|114331101|ref|YP_747323.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] gi|114308115|gb|ABI59358.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] Length = 352 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 117/359 (32%), Gaps = 10/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I +RY L + + + L DL + + +G+ Y+ + A +P Sbjct: 1 MKICYRYIALQVLTGMIIATVVLLPLFSFFDLLDQLDDVGK-GTYTTRDAFLYTAMLMPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 QI PFI L+ + L + ELV R G S + + L T+ + Sbjct: 60 RFIQIAPFIALLGTVGALGGLAVSLELVAMRVAGFSPLMISLAPIGIGGGLITSTIALEY 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ I L + + + W + + ++L + + Sbjct: 120 LVAPQFQQQAIVLRAVALEQSAELGKGLGIW----TRNEQNILRIGEMLHKGRAIDIEVM 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQ 238 + H I KL V + I + + + Sbjct: 176 HFDKQGLMTAHIHAQYADIFDKSMWKLHDVTVRMFAPDRIFSRKVHALQWHSFLGPEDIA 235 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ S + E++ F + + + + +M +AM LIA Sbjct: 236 TLTKPPESLTPLELLHHAEFLKMTGQKADA-YVMALWRKVGSVVMTIAMILIAIPFIFGS 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R +V + G +Y + I+ + G L P+ ++ P + I ++ LL+ Sbjct: 295 VREGLGGKLVLASLM-GISIYLLDQIIANIGLVFQLNPIVVSIAPGSILIVIAAYWLLR 352 >gi|311745737|ref|ZP_07719522.1| membrane protein [Algoriphagus sp. PR1] gi|126575180|gb|EAZ79530.1| membrane protein [Algoriphagus sp. PR1] Length = 357 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 116/353 (32%), Gaps = 2/353 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L + K +LKT + +L +++V V+D E + + Sbjct: 1 MKLLDKLIIKDFLKTYFFVVLMLILIVLVLDFTEKNDSYI-RNDVPSGEIMKYMINYGLY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P + I + + +E++ + G+S ++L PF+ ++L+G + L+ Sbjct: 60 LNNLLTPITVFISVIFITSKMAGRTEIIAILSSGVSFPRMLRPFIFAAMLIGGVSFLLNG 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + D + ++ + K H + Sbjct: 120 WVLPVATEGVTKFKLTYIDKTRTASDPNVHIKVGTDSYAYLSRFYKTGNTGYHFTLETIR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 R D A + ++G + I D F Sbjct: 180 DGRLINKLSSDRIQWDTAKNVWTLKNWRFRELNEFGEDYSVGEEMDTTLSITPDDFDLPE 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + E+ +++ + + + Y + P + +T I +S + SR Sbjct: 240 NHHETLKLPELSRQIRVLEDRGADNVAFYKIERYVRFMSPFAAIILTFIGVIMSAKKSR- 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +A G F+ + + ++F ++G P+ A +P I+ +++ Sbjct: 299 GGSGFQIAMGFLLAFIYILLFILSRTFAENGASYPIFAVWLPNIVFGLTGLVL 351 >gi|330950945|gb|EGH51205.1| permease YjgP/YjgQ [Pseudomonas syringae Cit 7] Length = 353 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 124/361 (34%), Gaps = 14/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILV-FVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 M L RY K L L L + LV + + + + Y+++ Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVS-LFAFIDEMGDISDT--YTLADALSYVMLTA 56 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +P L+ ++ L +SEL I RA G+SI +++ + +LL I VLV Sbjct: 57 PRRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLV 116 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +A E + +GD Q + W + + I + N + Sbjct: 117 GEYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGV 171 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDG 236 T D + ++ A A D +LK V + +T ++ + Sbjct: 172 TRYRFDDQRHMLTSSFAKEANFKTDYWELKDVTTTHFNDGSTKVINTPVERWDVALSPQL 231 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 232 LSTLIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIF 290 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS V G+ GF I ++ P+ A L+P +L+L Sbjct: 291 GPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGVLLLR 350 Query: 357 Q 357 + Sbjct: 351 R 351 >gi|218508596|ref|ZP_03506474.1| putative permease protein [Rhizobium etli Brasil 5] Length = 239 Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 2/240 (0%) Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G++ + + W+ + IPW++ + + D+ IGA+ + D Sbjct: 1 MPAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTKLIDAVL 60 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Q+ Sbjct: 61 IHFDSSGRVILRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQDFVQERL 120 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + F+++ +++ + I ETQF L+ PL+LVAMTLIAA+VSL+FSR Sbjct: 121 TAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTLIAATVSLKFSRF 179 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 NQ R ++ GI SGFMLY I ++K+FG SG++ P A IPV++ ++L ILL +EDG Sbjct: 180 NQSRSVILGGILSGFMLYVITVLVKAFGSSGVVPPFVATWIPVVVALALGATILLHQEDG 239 >gi|157363796|ref|YP_001470563.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] gi|157314400|gb|ABV33499.1| permease YjgP/YjgQ family protein [Thermotoga lettingae TMO] Length = 1102 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 122/355 (34%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 GIL +Y K + L L G + + +++ + + I + +P Sbjct: 1 MGILTKYIIKLSVGPMLIGLAGFV-IFVSVEILYQLSDLIVRHRVGIFVLLKVLYYYLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP L+ V L+ EL+ + GIS+ L+ PF++ SI L T ++ + Sbjct: 60 FVALGIPVGILLSIFWVLSQLSTDHELMALQVHGISLKVLIVPFLILSIALSFVTYVLSD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + +I ++ + +I Q + F + Sbjct: 120 RIVPLYNQKADSVISKYVYKRPEVFISENVLTKIDESQYFYVKKYDRQNGILEDVVLFRN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +++ + + + K+ +V + R I N L++ ++ + Sbjct: 180 EPSEEEIITAKKVVKEKNKWFMYDGKMYRVDKDGVLRFDISFNKVELDLQEDIESIMRVG 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + E+ +++ K + + + + L V + LI +SL F+ Sbjct: 240 KTPKDMRSEELKERIDTFKKLGV-DPAPWIVELHTRYSLSLGPVIIVLIGIPLSLMFN-L 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 V + + + GK ++ PV +A IP + L+ L Sbjct: 298 KSKSWGVILTFVIVVLYQGSGAWLGAMGKERLVDPVTSAWIPNTIFGVTGALLFL 352 >gi|323697853|ref|ZP_08109765.1| permease YjgP/YjgQ family protein [Desulfovibrio sp. ND132] gi|323457785|gb|EGB13650.1| permease YjgP/YjgQ family protein [Desulfovibrio desulfuricans ND132] Length = 375 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 130/356 (36%), Gaps = 6/356 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L L L + D+ + + ++P Sbjct: 1 MIGVLSRYLIRQNLYLMAICLAVGTSLYLLSDIFDRLDDFI-RAGLGAQTILFYFIVKIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI+ Q++P + L+ +V L R+ E++ RA G+S + FV+ +++ ++ Sbjct: 60 LIVSQLMPAVFLLAMVVQLGVLARSREMLALRAGGVSFAWFIRFFVIYALIWSCGQLVFS 119 Query: 121 NPIATSGEKIGIDLIQQW-KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + GE+ + ++ + + + W + + I Sbjct: 120 QFLGVFGEQEANRIWKEDVRKKQLDELTIHNLWFRDGPFIVQAKEAQPSKSRASDITIYE 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + + +I++ K A + + + ++ + + ++ +K + Sbjct: 180 FTTDNQELIRILNAKKALIDDHGWGLLDVHELDTRTFITVDRPSQFLSVRQNLKAYAAVE 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A E+ + ++ +S + T ++ + +V M L+A + + Sbjct: 240 LKGDTAQLPLIELSRAIARLQESGS-NVEMLLTIWHGKLSYAFSMVVMALLALVLV---T 295 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 S + + F+ Y + + + G+ G+L P+ AA + + +L+ L L Sbjct: 296 FSENVYANIGLALILIFIQYGMHVVGATAGEKGVLPPILAAWLGNGIMAALASLRL 351 >gi|332524895|ref|ZP_08401082.1| hypothetical protein RBXJA2T_03768 [Rubrivivax benzoatilyticus JA2] gi|332108191|gb|EGJ09415.1| hypothetical protein RBXJA2T_03768 [Rubrivivax benzoatilyticus JA2] Length = 370 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 115/367 (31%), Gaps = 17/367 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + R ++ + + ++ L + L F IDL E +G + + A +P Sbjct: 1 MRTVRRLLYRDIVASVVFVALAFLSLFFFIDLVEKMGNVG-RAGRTTGVAVMSALLELPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ I L ++SE I R G+ + L+ V ++ G T V + Sbjct: 60 HFYELMPIAVLIGTIYSLARLAQSSEFTILRTGGLGPGRALSLLAVLGVVFGAITFAVGD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP----QQDIFIGAKKILPENHIWE 177 + E+ + + + W++ ++ + P+ + Sbjct: 120 YVVPVAERKAVAVKALAAGG--MRVGRTGAWLKEKRMTPEGERSYSVNLAGTTPDGRLSG 177 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---------STTL 228 + + + L + ++ + + + Sbjct: 178 IRIFEFDADGRLSVRIAAKTGTVAADGTWTLSEAEVTRWPDVRLREPAGVVEQRLPELRW 237 Query: 229 NIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMT 288 + + + + ++ + + E F+ + PL + MT Sbjct: 238 ASTLTPEVVAAAVMPRETMTTADLWRYSVHLSDQAQATQS-YEILFWKKALYPLACLVMT 296 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 +A + +R+ + V GI G + + G P AA P +L + Sbjct: 297 ALALPFAYLHARAGSVSLKVFGGIMLGISFVLLNNLAGHVGLLRDWTPWIAAATPSLLYL 356 Query: 349 SLSILIL 355 +S+ Sbjct: 357 LMSLAAF 363 >gi|167645642|ref|YP_001683305.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348072|gb|ABZ70807.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 354 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 124/358 (34%), Gaps = 10/358 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + Y + L L ++ ++DL E+ + + + AA R P +++ Sbjct: 3 IQLYVLRTVGTRVLGAGLILFSILQILDLLEVTTDIIDR-GLGTAGVLYYAALRSPRLVE 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q+ P TL + F L R + ++ RA GIS ++++ + L+ IA Sbjct: 62 QVAPLATLAGGLFAFSQLARENAIIAMRATGISAYRIVGMALPVVFLVMALDFSCAQIIA 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + ++ W +P + D+ I A + Sbjct: 122 PRTDP----VLADWWQATTPAAERKVPGPRSFRAGDDLVIAAGASADGGTLNAVKIYRRD 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKFS 241 I + + L K V ++ ++ + P+ Q Sbjct: 178 KIGRLIERIEAPSASYNSGGGWTLAKPVIVRFKGEQVNVVPAAQLSWPSPLHRQDVQALF 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + ET+F P + M L++A V+L RS Sbjct: 238 ADSPVPTAATARRAL--LSGGGDRPAAFYETRFLSAFAGPFAALVMLLLSAPVALANFRS 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 Q ++A G+ +G + + ++ + G+ G L P+ A ++ +L++ L+ E Sbjct: 296 GQGAGLLAGGLAAGLLFLVVNGMLSALGEGGSLSPILAVWGGPVIFAALAVYALVVLE 353 >gi|262376977|ref|ZP_06070203.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] gi|262308015|gb|EEY89152.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] Length = 356 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 112/354 (31%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ ++ + L L + + + Y P + Sbjct: 6 IVAKHVTQTTALAMLGATAVLAGLQVLFTYLGELGSLKD--GYGAWDALKYVLWGAPNYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ ++ L SEL++ R++G+S+W+++ + ++LL + + + + Sbjct: 64 YEILPISALIGAVLGLGTLASNSELIVMRSVGVSLWRIVGWVIRSALLLVVLSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + W + I + +N DF Sbjct: 124 IPYTNEQAKSVKS--ASKAAQLGEVRGYWTREGQRFIYIDYANSQGQLKNVQMLDFDQNY 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + + + L + ++ + Sbjct: 182 RLRGTLQADQGQFVKDGSWTLDNTEQFDILQNGNATLVKQQQQPLALALQPKYVHMVTID 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S +++ MS+ ++ + + F+ + P L+A+ +IA S R Sbjct: 242 PEDLSPSQLVSFMSYMHEYSQVPKT-YQLAFWQKLGSPFALIALVVIACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F+G + + + P IP+++ + +L + Sbjct: 301 MGFRLVIALFAGLGFFYLQDFLGYASLIYAPSPAWFVFIPILIMFGIGGYLLHR 354 >gi|213962435|ref|ZP_03390697.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] gi|213954761|gb|EEB66081.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] Length = 358 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 124/357 (34%), Gaps = 3/357 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T ++ + + ++DL+E ++M E ++ + + Sbjct: 1 MKILDWYILKRYLLTFFIMIVLFIPIGIIVDLSEKVDKMIERK-APMNEILWYYLSFIVY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + + I L +E++ ++ G+S + L P++VG+ ++ + + Sbjct: 60 FANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + D ++ + + + N + + + + Sbjct: 120 FIVPAASTVYNDFWNKYIRSSKVESVSDLYNQFSDNDYLYVSSFNYQEQKGYNFSVEHFD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K+ + K + I + ++ K D Sbjct: 180 GIKMKEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDILVKRDQLDTIFNFKPDDLMPME 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +++ +E+ K + + Y +TLI +VS R Sbjct: 240 YTAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAVSSVKKR- 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGK-SGILLPVAAALIPVILTISLSILILLQ 357 I + G+ GF + + + SG L P+ A ++P ++ ++L+IL+L + Sbjct: 299 GGMGINLMVGVVVGFSFVFFDRVFGTLAQTSGGLSPLMAVVLPNLIFLTLAILLLRK 355 >gi|217967689|ref|YP_002353195.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] gi|217336788|gb|ACK42581.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] Length = 356 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 123/355 (34%), Gaps = 4/355 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RYF + ++ LL ++ V L I + + + L T++P Sbjct: 1 MKIISRYFLQNFIPVFFVGLLLFTTILLVSPLF-IIMDLVVARSIPLKTALELFITKIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + + V + E++ +A G SI L ++ S+ + V Sbjct: 60 YLTYTFPMAIFLAVVYVIGQFSEHGEIMAMKASGASIKYFLPAILMFSLSAQLIMFYVNE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + L+ + +N + + + + ++ + K E+ + + Sbjct: 120 FVAPKAYEREKILMNKAYNNVIMPSRENVFFNENNSFYFFRKVDPKNKKFEDILLIELLE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-DKNSTTLNIPIKMDGFQKF 240 + + D + + + I + + Sbjct: 180 KGNVRLIIHAEKALWDEFKGWTFMNGEVYSLNKEGEMIFQGKFKEYKVTLNRAPYQLVPS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S+ S +EI+ ++ + + +T+F+ I +P ++A + L + Sbjct: 240 SKPVEEMSIFEIVDQIRLLEGTG-LNLNNLKTEFHIRIALPFTCPIFAILALGLGLNMGK 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + S F+ Y I +I +S K+GI+ A + I+ + + I +L Sbjct: 299 -GGRSLSFGLSVISIFVYYIIFSIGRSLAKAGIVPYFLGAWLGNIVFLIIGIYLL 352 >gi|77457217|ref|YP_346722.1| permease YjgP/YjgQ [Pseudomonas fluorescens Pf0-1] gi|77381220|gb|ABA72733.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 373 Score = 109 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 116/361 (32%), Gaps = 16/361 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAA-AGQLDPGSLFLIMGYRLPGFM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +L + + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLFRMTLFPATLVAVVVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-------IGAKKILPENHIW 176 A G L+ + + + + + + + + + + Sbjct: 121 APQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTYTETLSDDRVNLGSVFISQKN 180 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + ++ N + L Y + + + Sbjct: 181 LGANQKDRGISVLVAEKGRQEVRPDGNRYLILDNGYRYDGSPGQANYRAIHYETYGVLLP 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 SE+ R + + R++T+ + + +PL++ +TL+A +S Sbjct: 241 KPDVSEEVTDRDAMPTSSLL-------GSDDIRSKTELQWRLSLPLLVFIVTLMAVPLSR 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + + I TI+ + + G + P + +++ + +L Sbjct: 294 VNPRQGR-FLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHAIFLTIGLGLLY 352 Query: 357 Q 357 Sbjct: 353 W 353 >gi|120599782|ref|YP_964356.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] gi|120559875|gb|ABM25802.1| permease YjgP/YjgQ family protein [Shewanella sp. W3-18-1] Length = 370 Score = 109 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 120/357 (33%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + K + LL + + I + + S L +P ++ Sbjct: 2 IVFRYLIREVFKAQIAVLLVLLTIFISQHFVRILADASD-GEFPASLIVTLIGLNIPALV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V + +E+VI +G+S W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILVAHGRMYSENEMVILHGVGVSEWYVTRVTLILAVVNMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 E+ ++++ + + N + +F+ E + Sbjct: 121 TPWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPE 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + T + + +++L V YQ D Q Sbjct: 181 PSDETGVTNVVVAKNGRVLEDNMGAQQLQLNNGVRYQGSPRLKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + A +F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALTVTDLLK-------VESAEAVAEFHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + ++ + + ++ + + G++ + + + I +L Sbjct: 294 VRQGKFAKMLP-AVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGIFLL 349 >gi|282880317|ref|ZP_06289031.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] gi|281305819|gb|EFA97865.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] Length = 391 Score = 109 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 115/354 (32%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y K ++ T ++ + + + V D NE ++ E + A +P Sbjct: 32 KRIDWYIIKKFIGTYIFSIALIIAIAIVFDFNENLSKFTEYKAPVRAIIFDYYANFIPYF 91 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A GIS +L+ P+++ IL+ + + Sbjct: 92 SNLFSPLFVFIAVIFFTSKLAGNSEIIAMLATGISFKRLMRPYMISCILIASVSFFLSAY 151 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G + + +K+N + +D + I K D Sbjct: 152 VIPHGTVVRQNFDNLYKNNKKRSAADNVQLQVDKGTIAYIQHYDNKTKRGYGFSLDKFKD 211 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQK 239 + D + + + S I ++ Sbjct: 212 KKLVSHLTAMEIQYDTIADAKYHWTVTGWKIRELKGLREHITSGAERDTVIMMEPMDLVY 271 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E+ + +S + + + +++ I +T+I S+S Sbjct: 272 SKGQQETFTSPELREYISKQVNRGSGNVVQYQVEYHKRIASSFASFILTIIGLSLSAR-K 330 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F+ + TI +F + P+ AA +P IL ++ Sbjct: 331 RKGGMGLYLGLGLALSFLYILLQTISATFAINADAPPMLAAWVPNILFSVVAYF 384 >gi|312879634|ref|ZP_07739434.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] gi|310782925|gb|EFQ23323.1| permease YjgP/YjgQ family protein [Aminomonas paucivorans DSM 12260] Length = 337 Score = 109 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 116/337 (34%), Gaps = 7/337 (2%) Query: 26 ILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRT 85 +L+ +L + S+ L +P ++ IP +L+ ++ F L+ Sbjct: 1 MLLVAGNLLFKIADLVIQRGVSLGVVVRLFLYYLPGVVVLTIPMGSLLAALLGFGRLSAN 60 Query: 86 SELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQ 145 E+V +A G++ +++ P + S+L+ + ++ + + E+ ++L++ Sbjct: 61 VEIVALKAAGVAFQRIVRPVIWASLLVSLGSMALNETLVPLAERAAVNLLRYEVMQETPP 120 Query: 146 KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDK 205 +++ + + + +++++ A + Sbjct: 121 LFKERIFLKEEKDGHLKRVIYINRMRPRSGKMADILVQEFEEDRLSRIIAAPRGEWVRGE 180 Query: 206 VKLKKVVEYQYGRIP-----IDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN 260 ++ ++ L + + + S + +++ + Sbjct: 181 WWIEDGKVFEVDAQGKVRLLFTFRKQGLQLHLNPKEVETQSLDPQQMNLFQMRDSIRRLE 240 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 + R + +P V + L+ A+ RS+ + + F Y Sbjct: 241 EQGA-DATRLRVLLNLRLAVPWASVVLALVGAAAGSRPQRSSSSVGLGLSVVIVFF-YYV 298 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ +S G++ L V AA P ++ + L ++ + Sbjct: 299 TLSFCQSLGEASYLPAVVAAWFPNLIFLVLGGFLVRR 335 >gi|91792232|ref|YP_561883.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] gi|91714234|gb|ABE54160.1| permease YjgP/YjgQ [Shewanella denitrificans OS217] Length = 370 Score = 109 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 117/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY LK LL + + + + S L +P + Sbjct: 2 IVFRYLIAEVLKAQFAVLLVLLTIFISQQFVRVLADASN-GEFPASLVLTLLGLNLPQLT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++ + +E+V+ ++G+S W + ++ ++ +FT ++ + Sbjct: 61 LLILPLSFFLGILLAHGRMYAENEMVVLHSVGVSEWYVARVTLLIALANLVFTCVLSMYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 + E+ ++++ + + N + +F+ + D Sbjct: 121 SPWAEERQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVEKISKDNQLSKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + I + +++L++ V YQ + Q Sbjct: 181 PDDKEGMSNVVVAQQGRVIEDSIGSQQLQLERGVRYQGSPQGLAYQVIEFGGYRMEIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + N A +F++ IPL + +TLIA ++ Sbjct: 241 EVDERRRKLSALS-------MEQLNDTQGPEAAAEFHWRFAIPLSIPLLTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + I + ++ + + ++ I + + + +L Sbjct: 294 VRQGKFAK-MFPAILLYLGYFGLMIAGRKALEDEVIPEYLGMWWIHISVLLMGVFLL 349 >gi|262038173|ref|ZP_06011570.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] gi|261747821|gb|EEY35263.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] Length = 366 Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 122/362 (33%), Gaps = 13/362 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + +++ + ++ + L E ++ + VP Sbjct: 1 MKIIDKYIYNSLILPSVFGISIFTFILMLNVLIEAMERLF-ASDLPFLSVVDYFFYVVPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++V+ L+ T+E++ GIS+++++ P + ++L + + Sbjct: 60 ILVQTIPMGAFLGVMLVYGGLSETNEIIAMEGSGISLFRIIRPAFIFGLILTFIGLGLEI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + ++ ++ NP++ K+ + F Sbjct: 120 YVNPRALENINKQTKMLLATRPNSLTEEKIFLT--NPEKGFGFYIDKVDNKKATASQFLL 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM------- 234 + N A A + L V Y + + + + Sbjct: 178 LNKQGNNPYPVIFLAKSARFDPGVIVLSDVKGYSFDKEGNSQVAAEYKEQNVPVSTFFTS 237 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFS--NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + ++ ++ + + E+ + + + N +A + Y ++ PL V + + Sbjct: 238 EEGEQRQKKRSEMNLKELREFYNNNIGNPEMKEAALKALIESYQRVIGPLASVFLCWLGV 297 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 +S+ RS + I + F I+ K + A IP + L + Sbjct: 298 LLSVGNRRSGK-GISFGISLIVIFGYIAIVNYAKIMILKNNVPVSIAMWIPNFILFLLCV 356 Query: 353 LI 354 Sbjct: 357 YF 358 >gi|206900512|ref|YP_002251020.1| permease YjgP/YjgQ, putative [Dictyoglomus thermophilum H-6-12] gi|206739615|gb|ACI18673.1| permease YjgP/YjgQ, putative [Dictyoglomus thermophilum H-6-12] Length = 356 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 123/355 (34%), Gaps = 4/355 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +YF + ++ LL ++ V L I + + + L T++P Sbjct: 1 MKIISKYFLQNFIPVFFVGLLLFTTILLVSPLF-IIMDLVVARSIPLKVAFELFLTKIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + + V + E++ +A G SI L +V S + + V Sbjct: 60 YLTYTFPMAIFLAVVYVIGQFSEHGEIMAMKASGASIKYFLPAILVFSFSVQLIMFYVNE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + L+ + +N Q + + + + +N + K E + + Sbjct: 120 FVAPKAYEREKFLLSKSYNNIAVQSRENVFFNENNNFYFFRKVDPKNKRFEEILLIELLE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-DKNSTTLNIPIKMDGFQKF 240 K + D + + + I + + Sbjct: 180 RGNIKLIIYAKKATWDEIKGWTFMDGEVYSLNKEGDMIFQGRFKEYKVVLDRNPYQLVPS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S+ S +EII ++ + + +T+F+ I +P ++A + L R Sbjct: 240 SKPIEEMSIFEIIDQIRLLEGTG-LNLNNLKTEFHIRIALPFTCPIFAILALGLGLNMGR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + S F+ Y + +I +S K+GI+ A + I+ + + I +L Sbjct: 299 -GGRSLSFGLSVISIFVYYVLFSIGRSLAKAGIVSYFLGAWLGNIIFLIIGIYLL 352 >gi|282860071|ref|ZP_06269152.1| putative membrane protein [Prevotella bivia JCVIHMP010] gi|282587159|gb|EFB92383.1| putative membrane protein [Prevotella bivia JCVIHMP010] Length = 405 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 117/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G L Y K ++ T ++ +L + + V D NE ++ + + A +P Sbjct: 46 GTLDWYIIKKFIGTYIFAILLIISIAIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYY 105 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ IL+ + T + + Sbjct: 106 SNLFSPLFVFIAVIFFTSKLAGNSEVIAMLAAGVSFKRLMRPYMISCILISVLTFYLNSF 165 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +++N ++ + N I Sbjct: 166 VIPHGTVIRQNFESLYRNNKKNTSAENVQLQVAKNTVAYIQHYDDHYKRGYGFSLVKFEN 225 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN---IPIKMDGFQK 239 + D K+ + + T + ++ Sbjct: 226 KKIVSHMTAMEIQYDTVADTKYHWKVSNYKIRILRGLKEHITTGTEKDTMLLMEPTDLVY 285 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E++ +S + + E +F+ I + +T+I S+S Sbjct: 286 SKGQQETFTSPELLNYISKQTSRGASNVVQYEIEFHKRIAMSFSAFILTIIGLSLSAR-K 344 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F P+ AA IP ++ ++ Sbjct: 345 RKGGMGLYLGIGLGLSFGYILLQTVSATFAIQANTPPILAAWIPNVIFAFIAYY 398 >gi|109899862|ref|YP_663117.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] gi|109702143|gb|ABG42063.1| permease YjgP/YjgQ [Pseudoalteromonas atlantica T6c] Length = 368 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 119/357 (33%), Gaps = 10/357 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +++RY K +K+ L M + + ++ + S A +P++ Sbjct: 2 LIFRYLVKETVKSQTAVFLVLMAIFITNKFVRVLSEASN-GDIPASLVLGFLALSMPVLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++ L SE+ + RA GIS W + +V ++++ + T + I Sbjct: 61 SLILPLSLFLGIMLAHGRLYVDSEMTVMRACGISEWYVTRVMLVLAVIMALITGAMTLWI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG---AKKILPENHIWEDFT 180 A + L +Q + + Q +N + IF+ + Sbjct: 121 APLSVEREYQLEEQAGADTGLTTLIPGRFQQTANEKAVIFVHEIGNDSEPLKRVFMAQHD 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + T + +++ K L + + L QY +K+ + + Sbjct: 181 TTTDSQNVHLVYAKQGGLRELPDGSETLVLGDGIQYEGTLGEKDYRVVEFGEYQIQIAEQ 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + R + + A + + IPL L + +IA +S R Sbjct: 241 EAEQKRRKLSAYTT-----MQLFEDSSIDAIAELQWRFAIPLSLFFLVIIAVPLSAADPR 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + + ++ + + G + P+ + + + ++ + Sbjct: 296 QGRFGK-MFPALMLYLGYFLLLLAGRKVLEDGKIPPMLGLWWVHAVIGIIGMTLIFK 351 >gi|298529509|ref|ZP_07016912.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510945|gb|EFI34848.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 355 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 139/361 (38%), Gaps = 11/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L T L ++ ++D N M E + ++PL Sbjct: 1 MSVLNRYLLRQNLFYTAVLLFSGTMVYLIVDFVGRMNAMVE-AGLGALQVLEYFVFKMPL 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q +P I ++ ++ ++R++ELV + IS + F+ ++++ + + Sbjct: 60 IVAQTLPAIFMLGVLIQMAMMHRSNELVAMESSAISFRKPAVFFIGYALVVFMLLFVFSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + GE++ + Q + + + +D I ++ +DFT+ Sbjct: 120 TLGVRGEQVTRQIWNQDVRDREAAVEG---LEDVWVKDRDYMIHIERAHINEGRGKDFTA 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG---RIPIDKNSTTLNIPIKMDGFQ 238 KI A ++ +++ L+ V ++ R + + + I ++ Sbjct: 177 YKKSDPGKIQEIIKAPEFEVHKNRLLLRDVTVFKPHSLERQSLQEMEMEVKIDLRSFALV 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S + + ++ +S + T + I P LV MTL+A ++ F Sbjct: 237 DSDLPYQAWSIFTLSALVNQLKESGA-SVEKISTALHSKIAYPFALVVMTLLALAL---F 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R +V G+ F YT+ S+ + G+ P A + LS+L L Sbjct: 293 TRIKNIYALVTLGLVIVFFYYTVYVFGVSYAEEGVTAPFVGAWTANVFFGILSLLQLFWM 352 Query: 359 E 359 + Sbjct: 353 D 353 >gi|294139610|ref|YP_003555588.1| hypothetical protein SVI_0839 [Shewanella violacea DSS12] gi|293326079|dbj|BAJ00810.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 370 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 116/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + LK + LL + + + + + S L +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLLVLLAIFISQHFVRVLADASD-GEFPASLVMTLLGLNLPYLL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IP + ++ + SE+VI +G+S W + ++ ++ IFT ++ + Sbjct: 61 VLVIPLSLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTAMLSVYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 E+ +++ + + N + +F+ E D Sbjct: 121 TPWAEERQNQVLENAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELQKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + +++L V+YQ +D Q Sbjct: 181 PDDESGMSNIVVAEGGKVIEDDTGGQRLQLSDGVQYQARPKHVDFQIIEFGGYQMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 E+ S I M + F++ + IPL + MTLIA ++ Sbjct: 241 PVDERRRKLSAMPINDLMDIDGPAATAE-------FHWRLAIPLAIPLMTLIAVPMARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + I + ++ + + G++ + L IL+L Sbjct: 294 VRQGKFAK-MFPAILLYLGYFGLMIAGRKALEDGVVPEYLGMWWIHASALFLGILLL 349 >gi|209694120|ref|YP_002262048.1| putative permease [Aliivibrio salmonicida LFI1238] gi|208008071|emb|CAQ78212.1| putative permease [Aliivibrio salmonicida LFI1238] Length = 370 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 116/356 (32%), Gaps = 14/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K LK+ L ++ +I + + L +P + Sbjct: 2 IIIRYLIKETLKSQLAIFFVLFLIFMSQKFIQILADASD-GDIPGGLILSLVGYNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A G+ L+ + +++ G + + Sbjct: 61 LLMLPLSIFIGILLTFGRLYAESEITVMNATGMGNSILIRAALYLALITGSIAAVNSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ L++ + + + + + + +FI H+ F + Sbjct: 121 SPWSQEQSTKLMENVESDAGIELLQKGQFKPSPDGKAVVFIDDISDKGGKHLVNIFLAQP 180 Query: 184 IDKKN-----KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + I + + L Y+ +D + + G + Sbjct: 181 VPNDSLRPSVLISEKGTVKQLDDGRQVLVLDNGTRYEGIPTRLDYLESNFESYEVLIGQK 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ + + + A+ + + I + L + +T++ +S Sbjct: 241 EVKEKRRDWDALPTLDLIKRTE-------LEAKAELQWRISLILCIPLLTMVVVPLSAVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + +A I + ++ KS + G L P + + + I++ Sbjct: 294 PRQGRFAK-LAPAILLYLAYFLSLSAGKSAIEEGSLHPSVGLWAINAVLLIIGIIL 348 >gi|331007486|ref|ZP_08330657.1| putative permease [gamma proteobacterium IMCC1989] gi|330418710|gb|EGG93205.1| putative permease [gamma proteobacterium IMCC1989] Length = 362 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 128/368 (34%), Gaps = 18/368 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y F+ + + L LL L + L + + P Y+ + + +P Sbjct: 1 MRLLNAYIFRTTVVSILVVLLVITALDILAKLIDELGNLT--PAYTFAEALIYVVLAIPS 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q +PF LV +V +L TSELV+ RA G+S+ +L + + ++ Sbjct: 59 SFYQYMPFAGLVGGLVGLGSLASTSELVVMRAAGVSLLRLTWAVLKPVLWFIAAMLVFAE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ G+ S ++ + N T Sbjct: 119 YVIPVSDQYAESRRSALLQGGNTALSAKG----GVWNREGTLFMHFNSVQANGKLLGVTR 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-----------STTLNI 230 D K ++ A+ A+ D + + VVE ++ + S Sbjct: 175 YQYDDKQRLTLASFAETALYTADGWREENVVETRFLDAQSSSDKEALITTATYPSRPWQT 234 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 + + + + + ++ + K N N + ++ ++ PL+++++ L+ Sbjct: 235 ELSPNLLTILVQDTDNLAITKLYDYAQYLEKQN-LDNGKYLLAYWGKVLQPLVIISLVLV 293 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A S R + G+ G + ++ + P+ A L+P++ + Sbjct: 294 AISFIFGPLREVTMGYRIFTGVVVGIVFQLTQKLLGPASLLYGISPLFAVLLPILFCFGV 353 Query: 351 SILILLQK 358 + +L + Sbjct: 354 GLFLLART 361 >gi|228471152|ref|ZP_04055971.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] gi|228307092|gb|EEK16166.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] Length = 361 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 130/354 (36%), Gaps = 9/354 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + RY F +L T + ++ + + D+ E +++ + + A VP Sbjct: 8 TVDRYIFIQFLATYFFSIVLILAVAIAFDVTEKLDRLLQPDVPLRAIIWDYYANFVPYYA 67 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P + I V L SE++ + G+S +LL P+++G+ ++ I T L+ + + Sbjct: 68 NLFSPLFVFIAVIYVTSRLAENSEIIAILSCGMSFRRLLKPYMLGAAVIAILTFLLSSFV 127 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G ++ ID ++ + ++ I + F+ E+ + F+ Sbjct: 128 IPPGNRVRIDFQNRYIKDKRITYANAI----QMQVAPETFMFMSYYNDESKVGYTFSMDR 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKF 240 + K+ + +L+ +G N IPI F Sbjct: 184 FEGKDLKSRVMANSIIYDTLYNWQLQDYTITYFGERQDTLFRGNQLDTIIPITPRDFLVT 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + E+ + + + I + +TL+ S+S R Sbjct: 244 EGDVEMLTTPELYHSIQQQRMRGAATQL-YAIELHKRIAMIPASFILTLMGVSLSAR-KR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +A G+ F+ +T+ SF +G + PV AA +P ++ + +S ++ Sbjct: 302 KGGMGLALAVGLSLSFIYILFMTVTASFAVTGAMAPVVAAWLPNLVYLGISFVL 355 >gi|257468007|ref|ZP_05632103.1| hypothetical protein FulcA4_01647 [Fusobacterium ulcerans ATCC 49185] gi|317062293|ref|ZP_07926778.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313687969|gb|EFS24804.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 358 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 44/365 (12%), Positives = 118/365 (32%), Gaps = 13/365 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + L+ + + + + + + SI + + +P Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMMENIIVK-GISIIDIMRILSFYLPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F RTSE +IG+ + ++ P + + +F + Sbjct: 60 ILSQTIPMGIFLGVMLTFSKFTRTSEATAMSSIGMDLRGIVKPIFILACATTLFIFFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + +I ++ + + Sbjct: 120 SIIPRSFSKLQYITTKIAYENPVFQLKEKTFIDEVEE---YNLYIDRIEGKDRVAQGVLI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDG 236 ++ + A + + + Y + + + + + + DG Sbjct: 177 FQKNEDVEFPTVLVGKEAYWKDSSMVITDSKFYDFDKDGKEKLRGEFDDKKVPLDAYFDG 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S ++K+M ++ + + + +PL + ++L+ +S+ Sbjct: 237 IDIKVKDIEAMSISMLLKEMKDLPQNEKIP---YKVEINRKLALPLSTIMLSLLGVFISI 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + A + F T + I G + P P I+ ++ Sbjct: 294 GHHRSGK-GANFALSLVVIFSYITFLNIGMVMANRGKIPPFVGVWTPNIILFLVTFYFYK 352 Query: 357 QKEDG 361 +K G Sbjct: 353 KKSRG 357 >gi|317486217|ref|ZP_07945051.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] gi|316922516|gb|EFV43768.1| permease YjgP/YjgQ family protein [Bilophila wadsworthia 3_1_6] Length = 385 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 122/364 (33%), Gaps = 10/364 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L R FK + + + L+ + ++ + I +L P Sbjct: 1 MPSLLQRQIFKEIANLFVLAVGVLLTLILISRAV-QMRELFLGLDLGILDTVLLFGYMTP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L + +IP ++ + F ++ ELV RA GI+I+Q+L ++ S++ + T+ V Sbjct: 60 LFLMLVIPIACMLSVFLTFLRMSTDRELVALRAGGINIYQMLPAPLLFSVICMLLTLWVS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 G + I + + + + + Sbjct: 120 LHWLAWGMGHFRETILEIANTRARVVVQPGVFNTDFPNLVLFARQVNPGDGDMSQVLVDD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRI-----PIDKNSTTLNIPIK 233 ++ I+ + + L+ Y + D+ L + Sbjct: 180 RSHPERHMTILAPEGRFDTDTERGELVFLLEDGKIYTTDKKGASVLAFDEYKVRLPLDSL 239 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN-YRAETQFYFLIVIPLMLVAMTLIAA 292 + S+ ++ + + E + + P+ +A+TL Sbjct: 240 FKSLDLGDVRPREMSWSKLSSITREEALKVDANYANKLEVERHKRWAYPVACIALTLFVL 299 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 ++ F ++ + + F+ Y+++++ S G+SG + P +P IL + L I Sbjct: 300 PLASAFEGLHRQT-GLMLALAMFFVYYSLMSLGFSTGESGAIPPSIGLWVPNILFLCLGI 358 Query: 353 LILL 356 L Sbjct: 359 YGLW 362 >gi|297171530|gb|ADI22528.1| predicted permeases [uncultured Oceanospirillales bacterium HF0500_09M11] gi|297182284|gb|ADI18453.1| predicted permeases [uncultured Oceanospirillales bacterium HF4000_13G19] Length = 353 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 126/357 (35%), Gaps = 11/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RYF++ L +L + + L + + Y + + T VP Sbjct: 3 LLKRYFWRSVLLPSLAIVAIIVGLDCLFSFIYELEFL--RGGYQVMQALQFVLTTVPRRF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P L+ ++ + + EL + RA G+S Q+ + I L + ++ V + Sbjct: 61 HEYLPMAILLGTLIGLGLMANSGELSVIRAAGVSTLQVSWMVLRPVIFLMLLSIPVGEYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A E++ + G+ +S+ W + + I + N + T Sbjct: 121 APYTEQVAQSNRSLQEGGGEALRSEYGFWHREGDEFIHINT-----VQPNGVLYGLTRYR 175 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQKF 240 + +++ + + A+ D L+ + ++G + + + + Sbjct: 176 FNDDHQLEESQFVERALYQGDHWTLQNIQGTRFGDDRTETYTEGGGRWDTSLTPQLLSIV 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + ++ + + + + +++P + M LIA S R Sbjct: 236 VLEPRRLAMAKLWNYTRYMKEQGLQSADYMLAF-WQKLLMPAATIGMVLIAISFIFGPLR 294 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +A GI +G P+ AA +P +L + L I +LL+ Sbjct: 295 EVTMGLRMAAGIVAGLTFNYGQQFFGHLSLVFRTEPLLAAGLPPLLCLVLGIWLLLR 351 >gi|330811514|ref|YP_004355976.1| permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379622|gb|AEA70972.1| Putative permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 373 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 116/362 (32%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAS-GALDPGSLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +L + + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLDSEMTVLSATGMSQQRLFRMTLFPATLVALVVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK--------ILPENHI 175 A G LI Q + + + + + + + Sbjct: 121 APQGATQFQLLINQQDAMTEFDTLVPGRFQALRDGTRVTYTEQLSDDRIDLGGVFITQKN 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + ++ N + L+ Y D + + + Sbjct: 181 LSSDAKKDRGISVLVAEKGRQEINPDGNRYLILENGYRYDGKPGQADYRAIKYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S++ R + + RA T+ + + +PL++ +TL+A +S Sbjct: 241 PKPEVSDEVTDRDAMPTASLLGN-------DDIRARTELQWRLSLPLLVFIVTLMAVPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I TI+ + + G + P + +++ + +L Sbjct: 294 RVNPRQGR-FLKLLPAILLYMAYLTILISARGALEKGKIPPALGLWWVHSIFLAIGLGLL 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|297170682|gb|ADI21706.1| hypothetical protein [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 392 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 55/394 (13%), Positives = 116/394 (29%), Gaps = 42/394 (10%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY +LK L+ L+ + D + A A VP Sbjct: 1 MSTLDRYILAEWLKVFGVSLIVLTGLLVLQDAADHAEDF-RQGFAGAGEVATYYAWLVPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P V + V L R +E+ + RA G+++ +L +V ++LL + + Sbjct: 60 YLPWLLPIALFVSTLFVVATLRRNNEIAVLRACGVNVLRLSRSLLVTALLLSALSYGLNA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + L++ + D + M + F + + S Sbjct: 120 KWSPLAMEKSQGLLEVLRGKSDHRNFVSNFDMSPPKTNRRWFFRKFFAVTSSGAGVHLYS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY------------------------- 216 T ++ R + + + + Sbjct: 180 RTTGGRDSFRIRAEKAF-RDEDGCWRFLNGRFIGFAGPRGLPVPSESGEGLVWEAEFAEQ 238 Query: 217 ----------GRIPIDKNSTTLN-IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF 265 + +S L + + F ++ + S E+ + S + Sbjct: 239 DSSSDGFSSVPILNKQFSSLRLPDVREDPEPFLLMRKKPSELSVRELKTIVDASEVTEGN 298 Query: 266 HNYRAE--TQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 R + P + + +L VA + Y T Sbjct: 299 AAVRPYAIRMGHAFWASP-GCLLAVALGIPFALV-GNGRSAAAGVARALGLCVGYYVART 356 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + S G++GI+ AA +PV+L +++ L + Sbjct: 357 MGDSLGEAGIIPIEWAAGVPVLLLGIVAVWFLWR 390 >gi|298529508|ref|ZP_07016911.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510944|gb|EFI34847.1| permease YjgP/YjgQ family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 390 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 112/362 (30%), Gaps = 10/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL R K L L + L+ + + + + + I P Sbjct: 1 MKILHRQIIKEVGTIFLVTLASMLSLIVIGRMID-LKDIFVGQSIQILYVIKSFFYLGPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +IP ++ + F ++ EL + GISI L+ ++ S+ FT+ V Sbjct: 60 FLSMVIPIACMLSIFLCFLRMSSDRELTALQTSGISIRSLVLSPLLFSLGAMGFTLYVTL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + G + + + + ++ E Sbjct: 120 HLTSWGIDNFRETAVEMVREQTEVSMQPGVFHRMIPDMAIYVHNRDPGTSELKEVFISDD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVK--LKKVVEYQYGRIPID-----KNSTTLNIPIKM 234 + I+ L+ + L Y+ + + L++ + Sbjct: 180 TVPEAPLTIVAPTGRMLSDKEEGMLYFILDDGRIYRQDQEEHSLVSFGEYRLRLDLFSLL 239 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 ++ S+ E+ +++ A + + +PL + + L A + Sbjct: 240 GDAGLRDKRPEEMSWGELQAY-KDDAQADSRQYRLAVLEEHKRFSLPLACLILGLFAVPL 298 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L + + + + Y++ T + G++G L P A +P I + L++ Sbjct: 299 GLTLQGLGRN-WGLLLAMSCFLIYYSLFTAVYGLGEAGTLNPDLAMWMPNIFFLVLTLGG 357 Query: 355 LL 356 Sbjct: 358 FY 359 >gi|262370180|ref|ZP_06063507.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315219|gb|EEY96259.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 356 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 114/354 (32%), Gaps = 5/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ ++ K L +L + + E Y P + Sbjct: 6 IVAKHVTKTTAMAMLGATAILSVLQILFTYLGELGSLKE--GYGAWDALRYVLWGAPQYL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I+P L+ +++ L SEL++ R++G+S+W+++ + +++L + + + + Sbjct: 64 YEILPIAALIGSVLGLGTLASNSELIVMRSVGVSLWRIVGWVIRSALILVVLSFALSEWV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + W + + + +N DF + Sbjct: 124 IPYTNEQAKGVKS--HRTAAELGEVRGYWTREGQRFIYVDYANSQGQLKNVQVVDFDNNA 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K + + + + + T L + ++ + Sbjct: 182 RLKGVLNAEQGQFVQDGRWILENTAQVDLLPTGNATAQKAAETPLALALQPKYVHMVTID 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S +++ MS+ ++ + + F+ + P L+A+ LIA S R Sbjct: 242 PEDLSPSQLVSFMSYMHEYSQVPKT-YQLAFWQKVASPFALIALVLIACSFIFGPLRQQS 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +F+G + + + P +P++L +L + Sbjct: 301 MGFRLVIALFTGLGFFYLQDFLGYASLVYSPSPAWFVFVPILLMFVAGGYLLQR 354 >gi|255009350|ref|ZP_05281476.1| hypothetical protein Bfra3_09423 [Bacteroides fragilis 3_1_12] gi|313147107|ref|ZP_07809300.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135874|gb|EFR53234.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 365 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 117/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ E + +P Sbjct: 8 KRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P+++ + ++ I T ++ + Sbjct: 68 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G +D ++ I + I N D Sbjct: 128 VIPRGSVTRLDFEDKYVKKKKTTYVHNIQLEIDTGVIAYIDNYQDYNKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D + +K + + I + + IP++ F Sbjct: 188 KKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKETIIRGDKLDSIIPMEPADFMIMR 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + I + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPQLSAYIDKQRQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F T+ +F +G + PV A IP +L ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTVASTFAVNGNMPPVIAMWIPNLLYALIAFYL 359 >gi|317493504|ref|ZP_07951925.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918447|gb|EFV39785.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 359 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY + + L +L + + Y ++ V+ +P Sbjct: 1 MKIFSRYLIRNIFIGFAAAAGLLIPLFTTFNLMNELDDVS-PGGYHWTQAVVVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + PFI L+ IV L+++ EL R G SI+++ + ++L + + Sbjct: 60 SLIDLGPFIALLGGIVGLGQLSKSMELTAIRTTGFSIFRISIVALCAGLMLTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA+ E+ + + + S + + + + Sbjct: 120 WIASPLEQRALQMKNAAIALDESNDSVGNILWARQGNEFVTVKSLSEDNQPVGVEIFYYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ I +K L + + K S ++ + Sbjct: 180 PDRSLESYIYAQKATILDGNIWMLSGINEKRWVSGKETVETKESLQWKSIFTGMTLKELT 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ S ++ + +++ ++ + + + ++ +AM L+A + RS Sbjct: 240 MPSSTFSIKQLNQYITYLQNTDQPSI-EFKIALWQKLGRAILTLAMILLAIPFTFSVPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +A G+ G Y I+ + G L L P ++++++++ Sbjct: 299 PGLGSRLAIGVIVGLFTYISYQIVVNVGLLFSLNAAIVTLTPPAFILAIALVLVY 353 >gi|307566072|ref|ZP_07628530.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307345260|gb|EFN90639.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 427 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 118/354 (33%), Gaps = 4/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G L Y K ++ T L+ +L + + V D NE ++ + + A +P Sbjct: 68 GRLDWYIIKKFIGTYLFAILLIISISIVFDFNENLSKFTQYHAPWRAIIFDYYANFIPYY 127 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ A G+S +L+ P+++ I++ T + + Sbjct: 128 SNLFSPLFVFIAVIFFTSKLASNSEIIAMLAAGVSFKRLMRPYMISCIVISALTFYLNSF 187 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G I + +++N ++ + N I Sbjct: 188 VIPHGTVIRQNFESLYRNNKKNTSAENVQLKVAKNTVAYIQYFDDHYKRGYGFSLAKFEN 247 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQK 239 + D K+ Q + + + ++ Sbjct: 248 KKLVSHMTAMEIQYDTVADTKYHWKVSNYKIRQLKGLKEHITTGDEKDTILLMEPTDLVY 307 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Q + + E++ +S N + + + E +F+ I + +T+I S+S Sbjct: 308 SKGQQETFTSPELLNYISKQNSRGLSNVVQYEVEFHKRIAMSFSAFILTIIGLSLSAR-K 366 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + G+ F + T+ +F P+ AA IP + + ++ Sbjct: 367 RKGGMGLYLGIGLGLSFSYILLQTVSATFAIKANTPPILAAWIPNFIFVFIAYF 420 >gi|257454351|ref|ZP_05619614.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] gi|257448254|gb|EEV23234.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] Length = 357 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 123/356 (34%), Gaps = 8/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K L ++G +L V D + + +Y+ A P + Sbjct: 2 ILSRYVKKQALFAMTGAIIGLWLLKVVFDYLAELQDLND--HYNYLDALRFIAYSAPRDL 59 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +PF TL+ +V L TSEL + +A GIS ++++ + +I+ I +L+ + Sbjct: 60 LDYMPFGTLLGAVVGLGLLANTSELTVIQAAGISRFKIVGWVMQPAIIFVIIRLLLGQYV 119 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + + + +D I Sbjct: 120 VPTSNQLAHQVKHDKPLLSSAINGYWDKQANRIINIDHANTKGELKNIKVWQLDDNAHIQ 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQK 239 + + A + L+++ + + + TL +PI+ Sbjct: 180 QVLQADTGSFVSQNTADKTSGWQ-LQQIKQLTIAADGHSQLTTIPTMTLQLPIEPSAIYL 238 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S E+ + + + E F+ ++ P ++++ L+A S Sbjct: 239 LTRSPDNMSVTELWQH-QQLLAKDKRRSLEHEVAFWKKLLAPFAMLSLVLVACSFVFGSL 297 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R+ + + G + + ++ S P L+P+I + +L + ++ Sbjct: 298 RNQSLGYRIVIALLFGLVFSYLQDLVGFVSLSTGFSPFFMVLLPIIASAALGVYLI 353 >gi|39997020|ref|NP_952971.1| hypothetical protein GSU1922 [Geobacter sulfurreducens PCA] gi|39983908|gb|AAR35298.1| membrane protein, putative [Geobacter sulfurreducens PCA] Length = 399 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 109/352 (30%), Gaps = 12/352 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L+RY L ++ + L ++ + L +P Sbjct: 12 MSRLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFAR-GVPFLDVTRLILYMLP 70 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IP L+ ++ L+ SE+ +A G+SI + P + ++ T V Sbjct: 71 SFFLVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVS 130 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP-------QQDIFIGAKKILPEN 173 G + + + IL + Sbjct: 131 VYALPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKSGRISGILIHD 190 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 D S ++ + + + + + + + G ++ S L+I ++ Sbjct: 191 ERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIGT-GGYRLVEFTSYDLSIALQ 249 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + QK + E++ +M + + + +P V +IA Sbjct: 250 REQ-QKARLNEEDMTLGELLARMKSPGEQ-PKLVREMHFELHKRFALPFACVVFAVIAVP 307 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + ++ RS + A GI + Y +++ K+ + GI A IP + Sbjct: 308 LGIQNQRSGRAG-GFAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWIPNV 358 >gi|295675784|ref|YP_003604308.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] gi|295435627|gb|ADG14797.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] Length = 382 Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 61/378 (16%), Positives = 117/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYERYFARQIYLTFVFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ + L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNRALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ------DIFIGAKKILPENHI 175 + +++ + + + W++ + ++ F+ ++ P+ I Sbjct: 120 VVGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTERADGEQVTRFVNVGELRPDATI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R L V + Q Y Sbjct: 180 SNVRIYEFDSKFRLSNIRIAQSGRYQPPGHWLLTGVTDTQLLDVARAPGTPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + N R E + Sbjct: 240 ANQVTLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHL-TENHQDTQRYEIALWKK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 VLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPGLIYLVLGLVGL 376 >gi|152978627|ref|YP_001344256.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] gi|150840350|gb|ABR74321.1| permease YjgP/YjgQ family protein [Actinobacillus succinogenes 130Z] Length = 368 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + LK+ L +++ F L + N L +P + Sbjct: 2 ILTRYLTREVLKSQAAVLFILLLIFFSQQLVRVLGSAAN-GNVPADLVFSLLGLGMPAMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S I + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVVLLLSFFTAILAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++++ K N +M +N +FI K N ++ T Sbjct: 121 SPWAIQKQTEIVEDAKANPRMAALSAGQFMVSNNNDFVLFINNIKDNQINDVYLFQTRQK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K ++ + +L + N L ++ + Sbjct: 181 GNAKPSVVTAEKGELKSLPNGDQILSLANSQRFEGSAALPDFRITRFDEYQAYLG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S E ++ N + A+T+ ++ + + L + M LIA +S R + Sbjct: 236 HQSAGAIENEAEVLDFNTLTQLNTPAAKTELHWRLTLILAVPLMALIAVPMSRVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + + + + +KS G +G L + I+ + L I++ Sbjct: 296 FAKMLP-ALLLYLIYFLAQSSLKSAGTAGKLDAGIFMPLVNIVFLLLGIVL 345 >gi|265763912|ref|ZP_06092480.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263256520|gb|EEZ27866.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 365 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 117/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ E + +P Sbjct: 8 KRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P+++ + ++ I T ++ + Sbjct: 68 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G +D ++ I + I N D Sbjct: 128 VIPRGSVTRLDFEDKYVKKKKTTYVHNIQLEIDTGVIAYIDNYQDYNKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D + +K + + I + + IP++ F Sbjct: 188 KKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKETIVRGDKMDFIIPMEPADFMIMR 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + I + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPQLSAYIDKQKQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F T+ +F +G + P+ A IP +L ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTVASTFAVNGNMPPMIAMWIPNLLYALIAFYL 359 >gi|108761666|ref|YP_631128.1| hypothetical protein MXAN_2917 [Myxococcus xanthus DK 1622] gi|108465546|gb|ABF90731.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 370 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 113/362 (31%), Gaps = 12/362 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY L ++ +L+FV+ + + ++ A L A P + Sbjct: 4 LSRYLLGELLVPLGVWVAFMFLLLFVMQFLRGTDVLLGSS-VTLVDMARLLAYLAPHFLM 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ L ELV +A+GI +LL + ++ L + +++ + Sbjct: 63 MALPIAFLLAILLGLGRLGEDRELVALQALGIGPVRLLAAPMGIAVALSVLMLVITSTAQ 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G L+ + + + + ++ Sbjct: 123 PWGLTGLKVLVSEVIRKNAVGDVKSGVFYEDLSNLTLYAEQVSADGKWTNVLLHDDREAN 182 Query: 185 DKKNKIIHRKDADLAIIYN---------DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + R + + + +Y I D+ ++ + M Sbjct: 183 SPLLVLAQRGQVGTSTSGEVLRFALEAGEVHRSAGRETEEYSIIRFDQAEISVGVGASMG 242 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 +FS + E+++ + + + L +A L+ ++ Sbjct: 243 KRSRFSYSREELTPGELMEAAREAEAQGE-DARMYRMALHSRLGNALAPIAFALLGTPLA 301 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + R + + + Y + + + G+ G L A + ++ +++ ++ L Sbjct: 302 MG-RRQSGRAWGYLLTLGGYVLYYLLSRVFEQMGQKGQLPAGLAGQMANLVFVAVGLVAL 360 Query: 356 LQ 357 + Sbjct: 361 YR 362 >gi|298506037|gb|ADI84760.1| membrane protein, YjgP-related [Geobacter sulfurreducens KN400] Length = 388 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 109/352 (30%), Gaps = 12/352 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L+RY L ++ + L ++ + L +P Sbjct: 1 MSRLLFRYICTETAVPFALGLTVFTFVLLMGRLLKLAEMVFAR-GVPFLDVTRLILYMLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IP L+ ++ L+ SE+ +A G+SI + P + ++ T V Sbjct: 60 SFFLVAIPMAFLLAVLLAMGRLSADSEVTAMKASGMSIGTIAVPVIAFGVITYAATTFVS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP-------QQDIFIGAKKILPEN 173 G + + + IL + Sbjct: 120 VYALPWGNTAFKKFLHGVIETRAAMSITEKVFNDEFPGLVIYVDGFDPKSGRISGILIHD 179 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 D S ++ + + + + + + + G ++ S L+I ++ Sbjct: 180 ERNPDEPSTIFAASGQLATNPEERIVRLRLNNGGIHRGIGT-GGYRLVEFTSYDLSIALQ 238 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + QK + E++ +M + + + +P V +IA Sbjct: 239 REQ-QKARLNEEDMTLGELLARMKSPGEQ-PKLVREMHFELHKRFALPFACVVFAVIAVP 296 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + ++ RS + A GI + Y +++ K+ + GI A IP + Sbjct: 297 LGIQNQRSGRAG-GFAAGIILLMLYYILMSAGKTVNEKGIAPAFVAVWIPNV 347 >gi|163750106|ref|ZP_02157349.1| hypothetical protein KT99_20601 [Shewanella benthica KT99] gi|161330163|gb|EDQ01145.1| hypothetical protein KT99_20601 [Shewanella benthica KT99] Length = 364 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 108/352 (30%), Gaps = 14/352 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + K + L + + + + + S L +P + +IP Sbjct: 1 MIREVFKAQIAVLAVLLAIFISQHFVRVLADASD-GEFPASLVMTLLGLNLPYLAVLVIP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++ + SE+VI +G+S W + ++ ++ IFT ++ + E Sbjct: 60 LSLFLGILMAHGRMYADSEMVILHGVGVSEWYITRVTLLLAVGNMIFTGILSVYVTPWAE 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ-----QDIFIGAKKILPENHIWEDFTSIT 183 + +++ + + N + + I + D + Sbjct: 120 EKQNQVLEHAQSEAGLAAITQGRFQTSPNGRAVLFVERIGRNNELYKVFVAQLPDPDDES 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + +++L V+YQ +D Q E+ Sbjct: 180 GISNIVVAQGGKVIEDETGGQRLQLSDGVQYQATPKKVDFQIIEFGSYQMQIKEQPVDER 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S I + M + F++ + IPL + MTLIA ++ R + Sbjct: 240 RRKLSAMPINELMDIEGPAATAE-------FHWRLAIPLAIPLMTLIAVPMARVNVRQGK 292 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + ++ + + G++ + + IL+L Sbjct: 293 FAK-MFPAVLLYLGYFCLMIAGRKALEDGVIPEYLGMWWIHASALCMGILLL 343 >gi|53713591|ref|YP_099583.1| hypothetical protein BF2302 [Bacteroides fragilis YCH46] gi|60681871|ref|YP_212015.1| hypothetical protein BF2391 [Bacteroides fragilis NCTC 9343] gi|253565580|ref|ZP_04843035.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52216456|dbj|BAD49049.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60493305|emb|CAH08089.1| putative membrane protein [Bacteroides fragilis NCTC 9343] gi|251945859|gb|EES86266.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301163363|emb|CBW22913.1| putative membrane protein [Bacteroides fragilis 638R] Length = 365 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 117/353 (33%), Gaps = 2/353 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K +L T ++ + + + V D NE ++ E + +P Sbjct: 8 KRLDLYIIKKFLGTYVFAIALIISIAVVFDFNEKMDKFMERSAPWSAIIFDYYMNFIPYF 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 P + I L SE++ + G+S ++L P+++ + ++ I T ++ + Sbjct: 68 ANLFSPLFVFIAVIFFTSKLAENSEIIAMFSTGMSFKRMLRPYMISAGIIAISTFILGSY 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G +D ++ I + I N D Sbjct: 128 VIPRGSVTRLDFEDKYVKKKKTTYVHNIQLEIDTGVIAYIDNYQDYNKTGNRFSLDKFVD 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 + D + +K + + I + + IP++ F Sbjct: 188 KKLVSHLTARSITYDTTAVNKWTIKDYMIRNLDGLKETIVRGDKMDSIIPMEPADFMIMR 247 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + ++ + + I + E +++ I + +T+I S+S ++ Sbjct: 248 NQQEMLTSPQLSAYIDKQKQRGIANIKEFEIEYHKRIAMSFASFILTVIGVSLSSRKTKG 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F T+ +F +G + P+ A IP +L ++ + Sbjct: 308 GMGLHLGIG-LGLSFSYILFQTVASTFAVNGNMPPMIAMWIPNLLYALIAFYL 359 >gi|330752041|emb|CBL80552.1| predicted permease YjgP/YjgQ [uncultured Flavobacteria bacterium] Length = 374 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 37/369 (10%), Positives = 105/369 (28%), Gaps = 25/369 (6%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y + ++ + ++ + + V D++E + + + Sbjct: 4 LDWYILRKFMGSFFLTMILILAIAIVFDISEKIDDFQNGATMN-EIVFDYYINFIAFYGN 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I + I + SE+V G S + L P+ +G+ ++ + ++ + + + Sbjct: 63 LFSALILFISTIWFTSRITSNSEVVAVLTSGTSFNRFLRPYFIGATIICLLSLTLNHLLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 I +++ + + + + + + + Sbjct: 123 PHTNIKRIAFEEKYITGVSRPINQKVHRQVLPGHYVYFETYSGQRQSGYQFTYEVFDSHR 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQKF 240 D + +L + + + + Sbjct: 183 LASK---LSADFVRLDTATGQWRLDNFRLRTLDSLNNEVILTGRRMDTTLAFTSEQIAPK 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 A+ + E+ + + + + + + P+ L+A S++ R Sbjct: 240 LSSIATMNSNELSRFIEQEEVTGNENIASYQMEMQRRTSYPVSSYVFVLLAVSLA-TQKR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL----------------LPVAAALIPV 344 I +A G+ + + I ++F +G+L A IP Sbjct: 299 RGGLGINIAIGLILCAVYVFAMQISQTFAATGLLSIDKGLGSALLWVGIQPAEFAIWIPN 358 Query: 345 ILTISLSIL 353 +L ++I Sbjct: 359 LLFAGIAIW 367 >gi|150021419|ref|YP_001306773.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] gi|149793940|gb|ABR31388.1| permease YjgP/YjgQ family protein [Thermosipho melanesiensis BI429] Length = 1096 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 123/355 (34%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K + + + + L ++L + + I + L +P Sbjct: 1 MRVLTKYILKLSIGPFIMGVAAFV-LFASVELLYQLSDIIVRHRVGILKLFELIYYNLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP L V L + E+ GI +L+ PF + S+L G+F + + Sbjct: 60 FVSMGIPVGVLFSIFWVLSQLYSSKEITAMLVHGIPSRKLVYPFFLLSVLFGLFAFYLND 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + I ++ + +I Q + + F Sbjct: 120 QMVPTFNHKAMKTISKYVYKRPEISIRENVLTKIDESQYFFVKRYDQSSGILYDVVLFQH 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I +++ + D + K+ + + + ++ + +L++ ++ + Sbjct: 180 IQGEERIITAEKVQKDEGKWFLINGKMYVTDKDGFLKFDVNFSKISLDLKDDLESLMRVG 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ K+ K + + + + +T++ +SL F Sbjct: 240 KSPRDMTGDELKNKIKTFRKLGV-DPSPWIVELHGRYANSVGPFIITILGVPLSLLFGLK 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ ++ + + + GK +L PV AA P ++ IS+ + + L Sbjct: 299 SKSWSVIFT-FAIVILYQGSGAWISAMGKENLLNPVLAAWFPNLVFISVGLFLFL 352 >gi|67922983|ref|ZP_00516478.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] gi|67855202|gb|EAM50466.1| permease YjgP/YjgQ [Crocosphaera watsonii WH 8501] Length = 394 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 114/357 (31%), Gaps = 16/357 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY F L L+ + L I + +S + ++P + Sbjct: 22 IMDRYLFIELLLPFLFGMGIFTSLGLSIGSLFDLVRRVTESGLMLSVALKVLLLKLPGFV 81 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + L+ SE++ R++G+SI++L+ P ++ ++ +V + I Sbjct: 82 SLAFPMAMLLAALMAYTRLSSDSEIIALRSLGVSIYRLIIPVILFGFMVTGCAFIVNDWI 141 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + +++ + + Q+ +L E++ Sbjct: 142 APAATHEAAVTLERAVNQERPDFKERNIVYPEYKTIQEENGQEATVLSRLFYAEEYNGEQ 201 Query: 184 IDKKNKIIHRKDADL---------AIIYNDKVKLKKVVEYQY-----GRIPIDKNSTTLN 229 + + ++ I ++ Y R + L Sbjct: 202 MQGLTILDRTQEGVNQIVTSESATWNISSNTWDFFNGTIYLIAPDGSYRNIVRFQHQQLA 261 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMT 288 +P + F + E + + S R + + +P + + Sbjct: 262 LPRAPLDLANRRQNFTEMTIAETKEYLKAMQLSGNEKRIRKVQVRLQEKYALPFVCLIFG 321 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 L+ A++ + + + F Y + + S G GIL P A +P I Sbjct: 322 LVGAAIGVRPQ-NTNKSTSFGVCVGLIFGYYLLAFMSTSLGIWGILTPFLGAWLPNI 377 >gi|325983221|ref|YP_004295623.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] gi|325532740|gb|ADZ27461.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] Length = 352 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 122/357 (34%), Gaps = 10/357 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 ++RY L L + + L DL + + +G Y I+ + +P Sbjct: 2 IYRYISGQVLIGFLIAIAVILPLFSFFDLLDQLDDVG-RGTYHITDAFLYTTMLLPRRFI 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 QI PF+ L+ + L SEL+ R G+S W++ + ILL + ++ IA Sbjct: 61 QIAPFVALLGTVTALGKLAVHSELIAMRVAGLSPWRISLAPLSVGILLLLGVAILEQFIA 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ I + + ++ W + I Sbjct: 121 PQLQQKAITYRAIALEQSAELGRNLGIWTRNEKNILRIGQIISNNKAAAIEILQLDEEGF 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI---DKNSTTLNIPIKMDGFQKFS 241 + + + I+ N+ +L V+ + I + + + + + Sbjct: 181 LAAHVLAQTAE----IVDNETWELSNVIVRTFANNQITVAHHTTLHWSSFVSPEDIATLT 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S S E+ + + F + + + I LM +AM L++ RS Sbjct: 237 KPPESLSPLELFRHVEFLRSTGQEADS-YALALWRKIGSALMTIAMLLLSIPFVFGSIRS 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +V + G +Y + I+ + G L P AL P I ++ + L + Sbjct: 296 GLSNKLVFASL-IGIAVYLLDQIIANAGLILQLNPALIALAPGFTIIMVANVWLNRT 351 >gi|91215236|ref|ZP_01252208.1| hypothetical protein P700755_13102 [Psychroflexus torquis ATCC 700755] gi|91186841|gb|EAS73212.1| hypothetical protein P700755_13102 [Psychroflexus torquis ATCC 700755] Length = 337 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 113/336 (33%), Gaps = 3/336 (0%) Query: 23 GAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNL 82 + + +++L+E + + E I V + P + I L Sbjct: 1 MFIPIGIIVNLSEKIDDIKE-NEVPIEEVLVFYGNFTIYFANLLFPIFLFLSIIWFTSKL 59 Query: 83 NRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNG 142 +E++ + GIS + L P+++G+ L+ ++ + + + + Q+ G Sbjct: 60 ANNTEIIAILSSGISFSRFLRPYLIGATLVCGIALMFTMYLVPNASQGFNEFKYQYFKKG 119 Query: 143 DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKII-HRKDADLAII 201 + + + Q+++ + + + + KI R + Sbjct: 120 KQSQETQNVYRQVNDNEFIFATNFQTSTGTARNFTLEHFEGQEMTFKISASRLKFNAKDS 179 Query: 202 YNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNK 261 +K + + ++S +P + + + E+ ++ + Sbjct: 180 TYTLNNFEKRTINEREDVIERQSSLDTILPFEFGELTPVEYIAETLDYGELKDFITTEKR 239 Query: 262 SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI 321 + + Y +P+ +T+IA SVS R +A GI F + Sbjct: 240 RGSANISSYQIVAYKRWSVPVSAFILTIIAVSVSA-MKRRGGMGANLAIGIVIAFAFIFL 298 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + P+ A IL L+I +L++ Sbjct: 299 DKVFGTIAEKSTFSPLIAVWFSNILFGLLAIYLLIK 334 >gi|254507443|ref|ZP_05119578.1| putative permease, YjgP/YjgQ family [Vibrio parahaemolyticus 16] gi|219549699|gb|EED26689.1| putative permease, YjgP/YjgQ family [Vibrio parahaemolyticus 16] Length = 366 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/353 (11%), Positives = 116/353 (32%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L +++ ++ + + + +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLLLVFVSQTFIKVLGDATD-GDIPARLILAIVGLNIPQMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A G+ L+ + + + + + Sbjct: 61 LLMLPMSLYIGILLTFGRLYSESEITVMNATGMGSKFLIRAAMSLAFITTVLAAFNTLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A ++ LI+Q + + + +FI + N+++ Sbjct: 121 APWSQEKEAQLIEQVAAENSVDLLKAGQFQRTPDGSSVVFIDEIRDNKLNNVFVAQVRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVK--LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ ++ + + + Y+ +D T + G ++ Sbjct: 181 DAILPSVMFSNSGEVREHDDGRQMIVMHDGTRYEGIPTRLDYMVTEFEHYSGLIGQREVQ 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S + + ++ S + + + I + + + +T++ +S R Sbjct: 241 AKRRSWGAVPTLDLIESTDLSA-------KAELQWRISLFVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + F+ + ++ KS + G + V + +I + Sbjct: 294 GRFAK-MGPAILAYFVYFISMSTTKSAIEDGNIPAVIGMWPINFALLVAAIGV 345 >gi|330938933|gb|EGH42432.1| permease YjgP/YjgQ [Pseudomonas syringae pv. pisi str. 1704B] Length = 302 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 107/311 (34%), Gaps = 12/311 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y+++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSMFAFIDEMRDISDT--YTLTDALSFVMLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL I VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMIAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGF 237 D + ++ A A D +LK V + + +T ++ + Sbjct: 173 RYHFDDQRHMLTSSFAKEANFKTDYWELKDVTTTHFNDGSTEVVNTPVERWDVALSPQLL 232 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 233 STVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIFG 291 Query: 298 FSRSNQPRIIV 308 RS V Sbjct: 292 PLRSVTLGQRV 302 >gi|294053783|ref|YP_003547441.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] gi|293613116|gb|ADE53271.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] Length = 372 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 119/372 (31%), Gaps = 18/372 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K ++ + L + ++ + ++ + + N + +P Sbjct: 1 MSLLDRYVLKEWVVAFVLTLGVVVGVLVLQNMYDSLPDLLS-SNATGPEILFYYMLSLPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P LV + L+R +E++ RA G S++++ V L + Sbjct: 60 YLPTVLPITFLVSLLFSLGTLHRNNEVIAMRATGASLFRISRSLWVAGFALSGLLFYLTA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSD---------IIPWMQISNPQQDIFIGAKKILPE 172 + + I ++K D + F+ Sbjct: 120 EVVPMTVERARTFIDNLSYTAKEKKQDVDAREVGLLHNLGFDNRKEGRLWFMNRFSERAW 179 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-------KNS 225 I + + T D + + + E Q D + Sbjct: 180 LAIGVNVHTRTADGIEVLRVSAEEGFYDEVKGYWVFLRGRELQIDPDTGDEIRLLSFEEK 239 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 D ++ S E+ + + + T+++ L+ P + Sbjct: 240 AYPEYTEDPDLMLAMHKKPNELSLLELREIIETVPAEENPAVHAYTTRYFSLLAAPFSCL 299 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + IA ++ R+N I ++ + + Y +ITI G+ ++ P AA +P Sbjct: 300 VLVGIAVPFAVSGVRANPM-IGISKCMGYFAVFYVLITISSILGERHMIAPWLAAWLPNF 358 Query: 346 LTISLSILILLQ 357 + +S+ + L+ Sbjct: 359 AMLVVSMWLYLR 370 >gi|310778171|ref|YP_003966504.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] gi|309747494|gb|ADO82156.1| permease YjgP/YjgQ family protein [Ilyobacter polytropus DSM 2926] Length = 357 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 118/363 (32%), Gaps = 9/363 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K ++ + + F+ID+ + + S+ + + +P Sbjct: 1 MKIIHRYILKEMRMPIIFGISLFTFI-FLIDIMVQMMENIIVKGVSLLDVVRILSFYLPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ + L TSE ++G+S+ ++ P + ++ + F + Sbjct: 60 ILSQTIPMGFFLGVMITYSKLTSTSESTAMNSMGMSLNSIIKPTFMLALGITAFVFFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + L + + ++ + +I Sbjct: 120 SIIPNSFVKLQQLTLKIAYEKPAFQLKENMYIDEVDDYSIYIDKVGGDGSAENIL----I 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM--DGFQK 239 +K N A A+ + + L+ Y +K + F+ Sbjct: 176 FKKEKDNSFPTVLTAKKAMWKDAAMILEDAEFYNLNPDGSEKLRGEFSRQKIPINSFFEN 235 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + + + S + + + IPL + + ++ S+ Sbjct: 236 VKMKVSEIETMSVRQLLKESKDKDDEEKLPYIVEMNKKLAIPLSAIMLGILGVLFSVGHH 295 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI-LLQK 358 RS + + + F+ + + G + P P + + L+I + LL+K Sbjct: 296 RSGK-GVSYGISLGVIFLYIASLNVGVVMANRGKISPFIGIWTPNFVLLGLTIYMYLLKK 354 Query: 359 EDG 361 G Sbjct: 355 RRG 357 >gi|209519257|ref|ZP_03268059.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] gi|209500337|gb|EEA00391.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] Length = 382 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 113/378 (29%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYERYFARQIYLTFVFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ + L + I L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNRALRSLLKIGIPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ--------------------- 160 + +++ + + + W++ + ++ Sbjct: 120 VVGPYTDQLSERVRLEALGSSVSTNFQSGVWVKDTLTERADGEQVTRFVNVGELRPDATI 179 Query: 161 ---DIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K N + D L + + Y Sbjct: 180 SNVRIYEFDSKFRLSNVRIAQSGRYQPPGHWLLTGVTDTQLLDVAPAPGTPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + N R E + Sbjct: 240 ATQVTLPEYSLRSELTPQILSVLLVSPDRMSMFNLFRYIQHL-TENHQDTQRYEIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPGLVYLVLGLVGL 376 >gi|253583477|ref|ZP_04860675.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251834049|gb|EES62612.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 358 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 121/365 (33%), Gaps = 13/365 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + L+ + + + + + + SI + + +P Sbjct: 1 MKIIEKYILEEVKMPILFGISLFTFIFLIDIIVAMMENIIVK-GISIIDIMRILSFYLPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F RTSE +IG+ + +++ P + + + +F + Sbjct: 60 ILSQTIPMGIFLGVMLTFSKFTRTSESTAMSSIGMDLREIVKPIFILACITTLFIFFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + + +I ++ I + Sbjct: 120 SIIPRSFTKLQYITTKIAYENPVFQLKEKTFIDEVDE---YNLYIDRIEGKDRIAQGVLI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDG 236 D+ + A + + + Y + + + + + + DG Sbjct: 177 FQKDEDVEFPTVLVGKEAYWKDSSMVITDSKFYDFDKDGKEKLRGEFDDKKVPLTAYFDG 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S ++K+M K+ + + + +PL + ++L+ +S+ Sbjct: 237 IDIKVKDIEAMSISMLMKEMKELPKNEKIP---YKVEINRKLALPLSTIMLSLLGVFISI 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + A + F T + I G + P P I+ ++ Sbjct: 294 GHHRSGK-GANFALSLAVIFSYITFLNIGMVMANRGKVPPFIGVWTPNIILFLVTFYFYK 352 Query: 357 QKEDG 361 +K G Sbjct: 353 KKSRG 357 >gi|237799874|ref|ZP_04588335.1| hypothetical protein POR16_13650 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022729|gb|EGI02786.1| hypothetical protein POR16_13650 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 353 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 113/330 (34%), Gaps = 14/330 (4%) Query: 1 MPGILWRYFFKY-YLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 M L RY K +L L + LV + + + + Y+++ Sbjct: 1 MVK-LDRYIGKSVFLAILA-VLGIILGLVSLFAFIDEMGDINDT--YTLADALSYVFMTA 56 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + +P L+ ++ +L +SEL I RA G+SI +++ + + L + VLV Sbjct: 57 PRRVYDTLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLFLMVAGVLV 116 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +A E + +GD Q + W + + I + N + Sbjct: 117 GEYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGV 171 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDG 236 T D + ++ A A D +LK V + I+ ++ + Sbjct: 172 TRYRFDDQRHMLTSSFAKEAHFKTDYWELKDVSTTHFNEGSTQVINTPEERWDVSLSPQL 231 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S S + + N R F+ ++ P + VA+ L+A S Sbjct: 232 LSTVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVALVLMAISFIF 290 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 RS V G+ GF I ++ Sbjct: 291 GPLRSVTLGQRVFTGVVVGFTFRIIQDLLG 320 >gi|269103492|ref|ZP_06156189.1| putative permease [Photobacterium damselae subsp. damselae CIP 102761] gi|268163390|gb|EEZ41886.1| putative permease [Photobacterium damselae subsp. damselae CIP 102761] Length = 366 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 111/352 (31%), Gaps = 7/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L ++ I + + L +P + Sbjct: 2 IIVRYLTRETLKSQFAVLFVLFLVFISQKFIRILADATD-GSIPSDLITTLMGLYMPSMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A G+ LL + +++ G + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKFLLRAALSLALITGALATFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ K + + N Q +F+ + + Sbjct: 121 SPWAAEKEAQVMESVKADSGLDLLVKGQFQAAPNGQGVVFVNDITDKGKTLKHVFVAQLK 180 Query: 184 IDKKNKIIH-RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D + D ++ + + + ++ + Sbjct: 181 GKDSIRPSVLVADHGYVSEHKDGRQILDLKDGTRYEGIPTRLDYSITDFEGYQAVIGQRK 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 R ++ + + ++ A+ +F + + + L + +T++ +S R Sbjct: 241 VKEERRDWDAMPTLELMQRA----EPEAQAEFQWRMSLILCIPLLTMVVVPLSAVNPRQG 296 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +V + + I+ KS + G L P+ ++ + + + + Sbjct: 297 RFAKLVP-AVLIYLAYFLAISAGKSALEDGTLPPMIGLWSINLVILLIGVAL 347 >gi|163788640|ref|ZP_02183085.1| hypothetical protein FBALC1_10402 [Flavobacteriales bacterium ALC-1] gi|159875877|gb|EDP69936.1| hypothetical protein FBALC1_10402 [Flavobacteriales bacterium ALC-1] Length = 340 Score = 107 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 119/337 (35%), Gaps = 3/337 (0%) Query: 20 FLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVF 79 LL + + +DL E ++ E + P + I Sbjct: 1 MLLLFIPIGITVDLAEKVGKILENK-APFGEVTAYYVDFTIYFANLLFPLFLFLSVIWFT 59 Query: 80 FNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWK 139 L +E+V + G+S + L P+++G+ ++ IF +++ ++ K + ++ Sbjct: 60 SKLANNTEIVAFLSSGVSFTRFLRPYLIGATVVAIFALVLGMYLSPMASKGFNEFKFKYL 119 Query: 140 DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLA 199 + + + QI++ + + K KI + Sbjct: 120 KKNKQVQQTRDVYQQINDNDYIFVSSFSPKSKTGMKFTYEHIEGNELKYKIFAENIRYIE 179 Query: 200 IIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 ++ ++ G I+K S ++ P +++ ++S+ E++ ++ Sbjct: 180 KDSTYRLTTYVKRSFENGVERIEKERSKDMHFPFELEDLTPVQYAAETKSYGELLDFIAA 239 Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 + + R E +P+ + +T+IA +VS R + +A+GI + Sbjct: 240 EKRRGSPNIGRYEVVKQKKWSLPVSIFILTIIAVAVS-SVKRRGGMGVNLAFGIAIAMIY 298 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + V A +P L L+I +L Sbjct: 299 VFLDKIFGVMAEQANFPAVIAVWLPNFLFGILAIYLL 335 >gi|192359904|ref|YP_001981938.1| putative permease, YjgP/YjgQ family superfamily [Cellvibrio japonicus Ueda107] gi|190686069|gb|ACE83747.1| putative permease, YjgP/YjgQ family superfamily [Cellvibrio japonicus Ueda107] Length = 366 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 128/352 (36%), Gaps = 5/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T+L + ++ + + ++ + A R+ ++ Sbjct: 2 IIFRYLSRDLLLTSLAVSAVLFTIFLTGKFSDYLDDAAQ-GKLAVDVLFTIIAYRMTGLL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++ + + SE+V+ A GIS QL+ +V S L+ L + Sbjct: 61 ELILPLGFYLAILLAYGRMYMDSEMVVLSACGISPGQLVGMTLVPSALIAAIVALFSFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + G ++ + + ++ + + + + Q + + L +++ + Sbjct: 121 SPLGAQLTEQTLAEQRNRSEFESMQPGRF---QSLGQGKIMAYVESLSDDNRLLQHVFVA 177 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + A+ ++ + G K T + + + ++ Sbjct: 178 HQEGPDSSAIVVAETGTQMYRPDYGQRYLVLNQGYRYQGKPGTNEFTITRFEDWGRYLPP 237 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + E+ + + + + + I +P+M++ TL+A +S R + Sbjct: 238 TTSVAEIELKSDAKTTAQLFRAEDNESIATLQWRISMPIMVLIATLLAVPLSKTNPRQGR 297 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + I T + +S G L P + + + +++L++ Sbjct: 298 Y-LKMLPAILVYVFYLTFLINARSAITKGNLNPALGMWVVHLPFLVIALLMI 348 >gi|301628860|ref|XP_002943564.1| PREDICTED: lipopolysaccharide export system permease protein lptG-like [Xenopus (Silurana) tropicalis] Length = 350 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 105/351 (29%), Gaps = 26/351 (7%) Query: 33 LNEIQNQMGEL-PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVIS 91 + + + Y +S + R+P + +++P L+ I V L ++SE I Sbjct: 1 MIDELRWVSRAPGGYQLSHALLTVVLRLPNYLYELLPISVLIGTIYVMARLAQSSEFTIM 60 Query: 92 RAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQ------------WK 139 R G+ + L +V T + + +A + G L + W Sbjct: 61 RTSGMGPGRALRMLLVLGCAFVALTFAMGDYVAPMANRAGQMLKVRYLGQLTTGATGGWL 120 Query: 140 DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLA 199 + ++ P + + + + Sbjct: 121 KERKDDGHSLAVNVRALGPDGQMIGIRIFDFDDQGRLSAQLQAASAQVAQTAQTAQTAED 180 Query: 200 IIYNDKVKLKKVVEYQY--------GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE 251 L + + ++ D S I + + E Sbjct: 181 AADAPGWVLTQAQQRRFVLRGADQAHVEQTDSASMRWPTGITAEMVSAALLKPERMPTIE 240 Query: 252 IIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYG 311 + + +S + + E +F+ + PL + M ++A + RS V G Sbjct: 241 LFQYISHLEANGQ-SAQKYEIEFWRKVFYPLSCLVMVVLALPFAYLHFRSGGLAAYVFGG 299 Query: 312 IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI----LILLQK 358 + +G + + T+ G P A P ++ + S+ ++L++ Sbjct: 300 VMAGISFFLLNTVSGYAGTLQNWSPWLTAAAPGLIYSAASLAAFGWLVLRR 350 >gi|71279918|ref|YP_267491.1| putative permease [Colwellia psychrerythraea 34H] gi|71145658|gb|AAZ26131.1| putative permease [Colwellia psychrerythraea 34H] Length = 388 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 117/361 (32%), Gaps = 10/361 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K KT L M + + E + A ++P + Sbjct: 2 IIFRYLLKEVAKTQLAVFFVLMTIFISQKFVRVLGDASE-GSIPGQLVMTFIALKIPDLA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++ + + SE+ + A G+S W ++ +V +++ IFT + + Sbjct: 61 GFILPLSLFLGVLLAYGRIYADSEMTVLHACGVSEWYVVRVTLVLAVITAIFTGIFTLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN-------HIW 176 A + + ++ + + Q N +FI K + + Sbjct: 121 APLASEYQYKVKEELAADSGLSALVSGRFQQTGNQDAVVFIHDKDRETNSFNKVFVAQLP 180 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + +++ K + +L +Y R K ++ Sbjct: 181 KGDNVDASIINSSLVYAKTGKVFEDDTGSQQLVLGDGIRYHRDIESKEFQSVAFNKYYIQ 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + R I + N + I PL + + IA +S+ Sbjct: 241 IKDQEVEHQHRKLSAIST-LELYNNMPPELESAYRATIQWRIAFPLACIILIFIAVPLSV 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + ++ + L + ++ + + + V I + + +++L+ Sbjct: 300 VNPRQGKFAKMLPALMLFLGYLLLLTSMRSAI-EKNAIPSVVGLWPIHISALFIGMMLLM 358 Query: 357 Q 357 + Sbjct: 359 K 359 >gi|308050966|ref|YP_003914532.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] gi|307633156|gb|ADN77458.1| permease YjgP/YjgQ family protein [Ferrimonas balearica DSM 9799] Length = 372 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 124/356 (34%), Gaps = 13/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K L+ + L + + I E + A L A +P ++ Sbjct: 2 IIFRYLLKEALRAQIAVLAVLVTIFISQQFVRILADAAE-GQFPGKLVATLLALNMPELL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++ + SE+ + A+G+S W + +V + ++ + + + + Sbjct: 61 SLILPLSLFLGVMMAHGRMYADSEMTVLHAVGVSEWYVTRVTLVLAFIMALISGITAIYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI----WEDF 179 A ++ ++++ + + + +N + I++ + + + Sbjct: 121 APWAKETEYQVLEKAESEAGLAALVQGRFQRAANGKAVIYVEGLSKGKLDTVFVAQLPEK 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + + + +++L + + N Q+ Sbjct: 181 DDPEGETALVLAEGGRIVEGSDGSQRLQLLDGNRFSGVLNQKEYNLVQFGEYEMEIKSQE 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S Y + + + A + ++ + +P+ L +TLIA +S Sbjct: 241 AAHKRRKLSAYSMSQLFEEG-------SPHAWAEIHWRLAVPIALPLLTLIAVPMSRVNV 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + ++ I + ++ + ++G + P + + + I+++ Sbjct: 294 RQGKFAKMLP-AILIYLGYFGLLMAGRKAIENGAIPPQLGLWWIHLAALVIGIVLI 348 >gi|186476978|ref|YP_001858448.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] gi|184193437|gb|ACC71402.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] Length = 382 Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 115/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRIYEKYFARQVYLTFVFILFAFSGLFFFFDLINELNSVGH-GNYKFQYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEYTIFRVSGLATNQALRSLLKIGIPLVFLTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + + + + W++ Q F+ ++ P+ I Sbjct: 120 VVGPYTDQLSERVRLEALGSSVSSNFESGVWVKDTLTARADGEQVTRFVNVGQLQPDATI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID------------- 222 K R L V + Q + D Sbjct: 180 SNVRIYEFDSKFRLSNVRIAKSGKYQPPGHWLLTDVTDTQLIDVAQDASKPADALNPVYR 239 Query: 223 -----KNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 +L + S + + + + N R E + Sbjct: 240 AKQAALPEYSLRSELTPQILSVLLVAPERMSMFNLFRYIQHL-TENHQDTQRYEIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGNLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ + L ++ L Sbjct: 359 LTAATPALIYLVLGLVGL 376 >gi|218710648|ref|YP_002418269.1| hypothetical protein VS_2728 [Vibrio splendidus LGP32] gi|218323667|emb|CAV19979.1| hypothetical permease [Vibrio splendidus LGP32] Length = 368 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 38/355 (10%), Positives = 112/355 (31%), Gaps = 11/355 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+ RY + +K+ ++ + + + S + +P Sbjct: 1 MSVIIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASD-GDIPASLVLSIVGLNMP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P + ++ F L SE+V+ A GI L+ + +++ Sbjct: 60 AMGLLMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITATVAAFNS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 ++ + + ++ + + + +FI ++++ Sbjct: 120 FWLSPWSQDKVEQMYEEVAAENSVDLLPKGKFARTPDGSSVVFIEGIDGNQLDNVFVSQM 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 ++ K D+ + + + + ++ +D T + G + Sbjct: 180 RPRDSVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPSRLDYRVTHFEEYEGLIGQR 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + ++ I + + RA+ + + + + L + +T++ +S Sbjct: 240 EVEKKGREWEAIPTIDLIGNQD-------NRAKAELQWRMSLVLCIPLLTMLVVPLSAVN 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + + I + I+ KS + G + L + ++I Sbjct: 293 PRQGRFAK-IGPAILIYLTYFLAISATKSSIEEGDIPAAIGMWPINALLLFVAIG 346 >gi|258593793|emb|CBE70134.1| putative Permease YjgP/YjgQ family protein precursor [NC10 bacterium 'Dutch sediment'] Length = 356 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 115/359 (32%), Gaps = 8/359 (2%) Query: 1 MPGIL-WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 MP +L RY + K + F G ++L N++ + L R Sbjct: 1 MPMLLLDRYLTREIAKPLVIFCGGLLLLFANFTAVRYLNRVAD-GIMPFQSVLPLVLVRA 59 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 + ++ ++P + +V L SE+ + G+S +++ VGS+++ + Sbjct: 60 AVALELLLPIALHLSVVVTLGRLYTDSEMTALFSSGVSPSRIMRIVCVGSLIVAGIVAFL 119 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + L ++ + D + + S+ F + Sbjct: 120 SIYVRPWANENRYRLEREAAADVDLNDMQPGHFYENSSGTVLFFQRRAQSSGRMREVFIQ 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + + A+ L +I D Sbjct: 180 SRSEDRIRLIWADEAHYPEAVEAGAGRTLV----CSGAQIYELSRDRGAVRQATSDELVL 235 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 E+ + S E +K + + + + + +F + + P+ + M L+ +S + Sbjct: 236 EWEKARTLSE-EYKRKAAPTWQLARSASPKDIAEFQWRLSTPVAALLMGLLGFPLSRARA 294 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + S Y + + + + + G++ V +L L +L ++ Sbjct: 295 RQGKYAK-LFVSVVSYATFYNLNMMARHWVEKGVVSTVPGIWWVHLLLAILVASLLWRR 352 >gi|239809483|gb|ACS26209.1| unknown [uncultured bacterium] Length = 291 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 110/295 (37%), Gaps = 9/295 (3%) Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P L+ ++ L +SEL I RA G+S+ +++ + ++L I +L+ +A Sbjct: 1 MLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVVAVMKPMLVLLIAGILIGEYVAP 60 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + E I + G+ Q S W + N + + + T D Sbjct: 61 ATEDIAQARRSLAQGAGEAQSSKRGLWHRQENEFVHV-----NAVQPGGMLVGVTRYRFD 115 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQKFSE 242 + +++ A A D L+ + + + ++ + Sbjct: 116 DERRLLSSSFARRASYQADHWLLENISTTHFRGDHTEVVRTPQERWDVQLTPQLLGTVVM 175 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + S + + + + + +N R F+ ++ P + VA+ L+A S RS Sbjct: 176 EPEALSITGLWRYIHYLGEQG-LNNGRYWLAFWTKVLQPAVTVALVLLAISFIFGPLRSV 234 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ GF+ I ++ + P+ A ++P + + +L + Sbjct: 235 TLGQRIFTGVVVGFVFRIIQDLLGPASQVFGFSPLLAVVLPAGICALIGAWLLRR 289 >gi|167561902|ref|ZP_02354818.1| hypothetical protein BoklE_05005 [Burkholderia oklahomensis EO147] gi|167569154|ref|ZP_02362028.1| hypothetical protein BoklC_04865 [Burkholderia oklahomensis C6786] Length = 382 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 120/378 (31%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRVYEKYFARQIYVTFVFVLFAFSGLFFFFDLIGELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ +I VF + SE I R G++ Q L + + + I T L+ Sbjct: 60 RFYEIIPVAALISSIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPIVIATYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 I +++ + + + W+ + + F+ ++ P++ I Sbjct: 120 FIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGQLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 + K N R L V + Q Y Sbjct: 180 SDVRIYEFDSKFNLQNVRIAKRGRYQPPGHWLLTDVTDTQLTNVSGAGGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + + N R + + Sbjct: 240 ARQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A +P + ++L + L Sbjct: 359 LTAALPGCIYLALGLFAL 376 >gi|94266927|ref|ZP_01290580.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452379|gb|EAT02998.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 111/348 (31%), Gaps = 4/348 (1%) Query: 12 YYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFIT 71 L LL ++F+ L + +++ L + + A P ++ +P Sbjct: 15 EMLAPFFAALLVINAVLFLGRLVPMLDEIFSL-GVGLGDFLRVVAYITPSMLLFSLPMAA 73 Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 ++ I+ F L E++ +A GIS+ ++L P V +L G+ T+ + G Sbjct: 74 MMAVIIAFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAM 133 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQI--SNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK 189 L+ ++ + + I + D Sbjct: 134 DQLMIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTIS 193 Query: 190 IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSF 249 + L ++ S Sbjct: 194 AQGGNLRADPAAGRVVLSLSDGSLHRSAGAKSQTIFFKHYKLEIPLDSPTLGPPGRSSMT 253 Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 +++ + YR +++ + +P+ + ++ S+S + + ++ + V Sbjct: 254 QAQLRQRATELGPEHPRQYRYIGEYHQRLALPVGCFLLAMLGLSLS-QMGQGSRLALGVP 312 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 G+ S Y ++T KS G++G L A +P +L + +L + Sbjct: 313 LGLASFVAYYVLLTAAKSLGEAGTLPMALAIWLPNLLFLLAGGYLLWR 360 >gi|46580073|ref|YP_010881.1| permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602469|ref|YP_966869.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|46449489|gb|AAS96140.1| permease, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562698|gb|ABM28442.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|311233928|gb|ADP86782.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris RCH1] Length = 360 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 125/354 (35%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L+RY F+ L+ L L L + DL + + + E + + PLII Sbjct: 3 LLFRYLFRNNLQVILPTLAVGTGLYLLSDLFDRLDDILE-AGVPGNVAIWYFVAKTPLII 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QI+P + L+ ++ ++R EL+ +A G+S + FVV +L + + + Sbjct: 62 SQILPAVFLLAALIQLCLMSRDRELMALQAGGVSFGAIARFFVVYGLLWAVLQLGFSQVL 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 +GE+ + Q+ D W N + + + + Sbjct: 122 GVAGERESARIWQEQVRGRTPGTRDLTNVWFTDDNHVIHLEVVTPALRKGQGFAAYGLAA 181 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + +I K ++ +G + + S + + Sbjct: 182 DGIHIDTVIRAKAFTGTAGTWKLQDVEVFSTRDFGHAKLPEMSIAIGQDPQDFAVIDPGA 241 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 +++ + + + T ++ + LV M L+A ++ + + Sbjct: 242 DPQRLPLWQLGDAVEKLRTAGS-NVEGLRTAWHMKLAYAASLVVMGLLAVAMV---TWRD 297 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + F+ YT+ TI + G+ GI+ P AA IL ++ LL Sbjct: 298 NIYLATGLALVFTFLFYTMFTIGSTLGQKGIVSPPIAAWGADILVGVVASARLL 351 >gi|123966805|ref|YP_001011886.1| putative permease [Prochlorococcus marinus str. MIT 9515] gi|123201171|gb|ABM72779.1| possible permease [Prochlorococcus marinus str. MIT 9515] Length = 386 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 44/373 (11%), Positives = 121/373 (32%), Gaps = 19/373 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ ++ + + + I+ + + + I + +P + Sbjct: 10 LIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKIFFLSLPGFL 69 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + NL+ SE++ +++G++ ++++ P ++ ++ + T + + Sbjct: 70 VIAFPMSVLLSCLLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTFLTFTFSDNL 129 Query: 124 ATSGEKIGIDLIQQWKDNGDK--------------QKSDIIPWMQISNPQQDIFIGAKKI 169 ++ DL+Q + D I I + Sbjct: 130 VPISNRLAADLLQNSMGKSMRTERGRYNISFSKYGSIVDSNTNKPIDGASHLTHIFYARR 189 Query: 170 LPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNS 225 + +++ K KI+ + + + I ++ Sbjct: 190 FLKKTMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKIMATEDEGSVSTIIFDT 249 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR-AETQFYFLIVIPLML 284 + + + + + K S R + + Y + +P+ Sbjct: 250 YIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIYEKMTLPMSC 309 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + LI +++ ++ + + I F+ Y + S G GIL P AA IPV Sbjct: 310 IVFALIGSTLGIKQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILTPFFAAWIPV 369 Query: 345 ILTISLSILILLQ 357 ++ + +L + Sbjct: 370 LMFLGFGTFLLWR 382 >gi|330818020|ref|YP_004361725.1| hypothetical protein bgla_1g31620 [Burkholderia gladioli BSR3] gi|327370413|gb|AEA61769.1| hypothetical protein bgla_1g31620 [Burkholderia gladioli BSR3] Length = 382 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 117/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G +Y+ + + P Sbjct: 1 MRLYEKYFARQIYLTFVFVLFAFSGLFFFFDLISELNSVGH-GSYNFGYAVLRVGLQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP TL+ I VF + SE I R G++ + L + + L I T L+ Sbjct: 60 RFYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNRALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS------------------------N 157 I +++ + + + W++ + Sbjct: 120 FIGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTI 179 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K +N + D L+ I K + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAKSGRYAPPGHWLLTDVTDTQLSPIVPAPNTPKDALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + + N R + + Sbjct: 240 SEQVSMPQYSLRSDLTPQILSVLLVSPERMSIFNLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A +P ++ ++L + L Sbjct: 359 LTAALPGLIYLALGLFGL 376 >gi|90416560|ref|ZP_01224491.1| hypothetical protein GB2207_05142 [marine gamma proteobacterium HTCC2207] gi|90331759|gb|EAS46987.1| hypothetical protein GB2207_05142 [marine gamma proteobacterium HTCC2207] Length = 370 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 127/354 (35%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T + ++++ + + + + + R+P + Sbjct: 2 IIFRYLCREILSATTAVCVILLLVLMSGRFVKYLGKAV-AGDMDSNSIFAMIGYRIPSFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P + ++ F L +E+ + +A G+S +L+ ++ + + + T + + Sbjct: 61 ELTLPLAFFLAVLLSFGRLYVQNEMSVLKACGVSERRLMGYTLIIASVFALATGWLSLSV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + SG L K + K + +S + A+ + + + E F ++T Sbjct: 121 SPSGMTKAEALFDAEKSRSELDKLMPKKFYSLSGGKGVT--YAEAVTEDRELDEIFLAMT 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK--FS 241 R LA + Y ++ F++ Sbjct: 179 AGSDENSDRRLILVLADKGRQQQAENSSERYLVMESGYRIEGVPGQNDYQITRFEEYGSR 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + ++ S + + ++ + + + IPLM++ +T++A +S +R Sbjct: 239 LEDSAPSIRKTKTDAMATGLLLGSNDPELQATLQWRLSIPLMVLVVTILAVPLSRTNNRQ 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + I F + M+ +SG + L + + +++L+L Sbjct: 299 GRYGK-LLPAIALYFTYLVALNAMRGALESGAIPISVTLLPVHAVYLGIAVLLL 351 >gi|94263395|ref|ZP_01287209.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456231|gb|EAT06365.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 400 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 111/348 (31%), Gaps = 4/348 (1%) Query: 12 YYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFIT 71 L LL ++F+ L + +++ L + + A P ++ +P Sbjct: 15 EMLAPFFAALLVINAVLFLGRLVPMLDEIFSL-GVGLGDFLRVVAYITPSMLLFSLPMAA 73 Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 ++ I+ F L E++ +A GIS+ ++L P V +L G+ T+ + G Sbjct: 74 MMAVIIAFTRLAGDLEIMALKASGISLPRMLPPVVFFGLLTGLMTLATATVLIPRGMTAM 133 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQI--SNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK 189 L+ ++ + + I + D Sbjct: 134 DQLMIHLAKEHIEEGIREKTFSEGLGDVVLYVDDISPDQRFWHGVYLSDLRDKDNPLTIS 193 Query: 190 IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSF 249 + L ++ S Sbjct: 194 AQGGNLRADPAAGRVVLSLSDGSLHRSAGAKSQTIFFKHYNLEIPLDSPTLGPPGRSSMT 253 Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 +++ + YR +++ + +P+ + ++ S+S + + ++ + V Sbjct: 254 QAQLRQRATELGPEHPRQYRYIGEYHQRLALPVGCFLLAMLGLSLS-QMGQGSRLALGVP 312 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 G+ S Y ++T KS G++G L A +P +L + +L + Sbjct: 313 LGLASFVAYYVLLTAAKSLGEAGTLPMALAIWLPNLLFLLAGGYLLWR 360 >gi|254251664|ref|ZP_04944982.1| hypothetical protein BDAG_00856 [Burkholderia dolosa AUO158] gi|124894273|gb|EAY68153.1| hypothetical protein BDAG_00856 [Burkholderia dolosa AUO158] Length = 382 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 60/378 (15%), Positives = 115/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP TL+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKI------LPENHI 175 + +++ + Q W++ + ++ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEHVTRFVNVGSPSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R L V E + Y Sbjct: 180 SNVRIYEFDSKFQLRNVRIAQSGRYEPPGHWLLTGVTETELTPIKPVAGQPADALSPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIVNLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|300718280|ref|YP_003743083.1| permease [Erwinia billingiae Eb661] gi|299064116|emb|CAX61236.1| Predicted permease [Erwinia billingiae Eb661] Length = 361 Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 104/335 (31%), Gaps = 2/335 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I RY + + L +L + + Y ++ ++ +P + Sbjct: 3 IFSRYLMRNIFIGFAAAAGLLIPLFTTFNLINELDDVA-PGGYRWTQALLVVVMTLPRSL 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + PFI L+ IV L+++ EL R G SI ++ +++ + V + Sbjct: 62 VDLAPFIALLGGIVGLGQLSKSLELTAIRTAGFSISRIARVMFCAGLVMTLTLGAVDEWV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A ++ + + + S I Sbjct: 122 AAPLQQRALQIKNVAMAKAESDSDAGNALWARSQDDFVTVQSLDNRNQPVGIEIFSWQPD 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K+ I + + + + + + + ++ + Sbjct: 182 LTLKSYIFAQSATIAGKGMWTLHNVTEKRWDKQQETVNNLPEMQWHSLFSGEDLKRLTLP 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S S ++ + + +K+ E+ + P++++AM L+A + R+ Sbjct: 242 AESFSARQLADYIVYLHKTGQPSL-EYESALWQKAGRPILILAMILLAVPFTFSTPRAPG 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 +A G+ G + + + I+ + G + Sbjct: 301 LGSRLALGVIVGLVTWIVYQIVLNLGILFSINAQL 335 >gi|220916596|ref|YP_002491900.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954450|gb|ACL64834.1| permease YjgP/YjgQ family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 371 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 41/364 (11%), Positives = 116/364 (31%), Gaps = 13/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G++ RY + L LL ++ + + + S+ ++ + +P Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFG-SGVSLVDVGLVMLSLMPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +IP L+ ++ L E+V A G+S +L+ ++ +++ + Sbjct: 60 LLGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + + + I+ + ++ S Sbjct: 120 SVEPASIRAARLRLNEVVKRNVTNDVRGGTFYDQIP-GYTIYAERARGGRWENVLIQDRS 178 Query: 182 ITIDKKNKIIHRKDA--------DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + HR ++ +V ++V Y K + + Sbjct: 179 NPDAPMLALSHRGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAEILVGLGTA 238 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF-HNYRAETQFYFLIVIPLMLVAMTLIAA 292 + ++ + ++ + + + + R E + + PL++VA L+ Sbjct: 239 LSDRNVLAKSSREATVSDLRARAAAAREKGDVVEARRQEGYLHRKLSAPLVVVAFALLGV 298 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + R + + Y ++ + + G L A +P ++ + I Sbjct: 299 PL--GAERRGGRAFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAAGI 356 Query: 353 LILL 356 ++L Sbjct: 357 GLVL 360 >gi|332280200|ref|ZP_08392613.1| YjgP/YjgQ permease [Shigella sp. D9] gi|332102552|gb|EGJ05898.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 386 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ + S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 381 >gi|300774823|ref|ZP_07084686.1| YjgP/YjgQ family permease [Chryseobacterium gleum ATCC 35910] gi|300506638|gb|EFK37773.1| YjgP/YjgQ family permease [Chryseobacterium gleum ATCC 35910] Length = 370 Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 133/368 (36%), Gaps = 11/368 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYS-----ISRGAVLA 55 M I+ RY K YL T + L+ I+V VID+ + ++ + Sbjct: 1 MLKIVDRYIIKKYLGTFSFMLVLLSIVVLVIDVQQKIPRIENAKAIDPKLDLMYFLIHFY 60 Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 + ++ + + + I + +E+V + G S + P++V SI +G+ Sbjct: 61 PFWIINLVVTFLSILVFISVIYFTSRMANNTEIVAIISSGASFHRFSKPYLVTSIFIGLI 120 Query: 116 TVLVINPIATSGEKIGIDLIQ-QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 ++V + + +L + ++ P + + IFI + + Sbjct: 121 ALVVYHMVLPWANIKKNELEAYTYNAANKEKILGTAPASSQLSKTEYIFIDSWNKREKRG 180 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP--- 231 + D+K + + L +E + +K + + + Sbjct: 181 SSFVYQKYDKDRKMTYELKASEVYWDKAKKQFVLNNYLEKTINKDNSEKLNNGIELRKNY 240 Query: 232 -IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 + +++ E++K + + + + +P+ ++ +T + Sbjct: 241 GHSPEELFPNELLGQNKTTPELLKFIEREKARGNSNLNSYLNELHQRTSMPVSIIILTFL 300 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A S+S + R I +A GI F+ +K ++ L P A +P ++ + L Sbjct: 301 ALSLSSQKKR-GGLGINLAIGISLAFIFVFSFEALKVVSENKSLSPALAMWLPNLVFLPL 359 Query: 351 SILILLQK 358 ++ + +++ Sbjct: 360 TLYLYIKR 367 >gi|330836571|ref|YP_004411212.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] gi|329748474|gb|AEC01830.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] Length = 363 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 109/361 (30%), Gaps = 7/361 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + +L L L +L+ +DL + + L +P Sbjct: 1 MKILDRYIMRSFLTVFLSALGICTLLLVAVDLFTNLDSYAK-NEVPFFAILRLTVLYIPD 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +I + + ++ ++EL+ GI +++ P + I + + T+ Sbjct: 60 AVSLVISPAVIFSATLTLALIHSSNELIPIFCAGIPYIRVIIPMMAVGICVSMTTLAATE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I +++ ++ + + + I ++ S Sbjct: 120 YIVIPSRVNRVEVQTEYTGSQTSKDNRNITFVDASGRFVLHAKRYDATRQRIMNMVLIER 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR-----IPIDKNSTTLNIPIKMDG 236 + + L V + + + + I+ Sbjct: 180 DGPGGRMTGRTSAGMAQWDETERRWILSDVSIQNFTEGDTVLSFHEDTLMSDILDIEPGL 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F + + + + + A T +Y L + +IA S++ Sbjct: 240 FSYLGTDIKNMDRKTALWYLDNMKGLDPYQWATAATDYYERAYSFLTPFILMIIACSMNY 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ ++ + I + Y + K ++ P+ +P+ L I+LS L Sbjct: 300 QYKKNV-LLFSILTSIGIAIVFYVTQLVTLLLAKQYVISPLTGVFLPLGLMIALSSAFFL 358 Query: 357 Q 357 + Sbjct: 359 R 359 >gi|119476403|ref|ZP_01616754.1| predicted Permease [marine gamma proteobacterium HTCC2143] gi|119450267|gb|EAW31502.1| predicted Permease [marine gamma proteobacterium HTCC2143] Length = 374 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 37/355 (10%), Positives = 113/355 (31%), Gaps = 5/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL+RY K L + +++V + Q S + R+P + Sbjct: 2 ILFRYLAKEILISLFAVSATLLVIVMSGRFVKYLAQAA-AGKLSPDILLNIMVYRLPSFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + ++P + ++ + + SE+ + A G+S +L +V SI + + + Sbjct: 61 ELVLPLSLFIAILLAYGRMYVESEMTVMAACGLSDRRLAVYTLVPSICVAVVVGYLSLYA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF--IGAKKILPENHIWEDFTS 181 + G ++ + +++ + + + + + ++ S Sbjct: 121 SPIGIGKVQEIFEDTQNSSGLELLIEGRFRVDEQSGRVTYVESLDNDVGIMQDVFSAEQS 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + ++ I +D + + +V + I + Q Sbjct: 181 LGSEGEEQLTVIFAEQGNIQMSDDQQSRYLVLRNGYQSVGQPGGLRYRISQFDEYGQLVR 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + ++ Y+ + + + + + + +++ + LIA ++S R Sbjct: 241 DPAVQKTLYK-RADARTTEQLLNSTLLEDKATLQWRMSLVILVPVIALIAQALSRTSHRR 299 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + + + + + ++ + L I +L Sbjct: 300 GRY-VKMLPAFIIYITYLVALNAARDAIGKEKISSDLGMWWVHLVFLGLGITLLF 353 >gi|329894347|ref|ZP_08270217.1| putative permease [gamma proteobacterium IMCC3088] gi|328923143|gb|EGG30466.1| putative permease [gamma proteobacterium IMCC3088] Length = 353 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 105/342 (30%), Gaps = 11/342 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + T LL + L + L + + NY+ S+ + A VP Sbjct: 1 MRLLDRYVGMQVIYATCLVLLVLVGLDALSALIDELQDL--KANYTFSKALLYVAASVPA 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++ P L+ +V L TSELV+ R G+S W LL + ++ +++ Sbjct: 59 RIVELAPIGILIGVLVALGQLASTSELVVIRGAGLSSWHLLRILMKPVLVFAGLMLIMGE 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E+ G N W + + + T Sbjct: 119 FVVPKSEQFGEAERALALSNKGSITGRYGMWNREGR-----HFIHFNAVQAGGVIYGVTL 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG---RIPIDKNSTTLNIPIKMDGFQ 238 T D ++ A+ A L+ V Q + + + D Sbjct: 174 FTFDDNWRLHESMSANRATFQRAGWLLENVQRTQVNSWGSQTSEHTTLLWETDLTPDLLA 233 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S S + + + + + E + + PL + + L+A Sbjct: 234 MESLSPERLSINGLFQYSQYLKQQGLESAD-YEVAAWRKLTQPLAIFVLVLVAMGFIFGP 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 R + V G G + ++ S + P A Sbjct: 293 LRDGTLGLRVFIGTLVGLVFKISQDVVASVTIVYGISPALAV 334 >gi|167835783|ref|ZP_02462666.1| hypothetical protein Bpse38_04778 [Burkholderia thailandensis MSMB43] Length = 383 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 119/379 (31%), Gaps = 27/379 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQAPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L V + + I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 I +++ + + + W+ + + F+ K+ P++ I Sbjct: 120 FIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGKLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-------------------Y 216 + + N R L V + Q Y Sbjct: 180 SDVRIYEFDSRFNLQNVRIAKSGRYQPPGHWLLTDVTDTQLTSLAGNGATSPADTLSPVY 239 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + +L + S + + + + + N R + + Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKE-NQQDTQRYDIALWR 298 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 KLLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPA 358 Query: 337 VAAALIPVILTISLSILIL 355 A +P + ++L + L Sbjct: 359 PLTAALPGCIYLALGLFAL 377 >gi|218555553|ref|YP_002388466.1| hypothetical protein ECIAI1_3128 [Escherichia coli IAI1] gi|218362321|emb|CAQ99943.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] Length = 386 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ + S Sbjct: 207 DDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 381 >gi|325267812|ref|ZP_08134462.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] gi|324980693|gb|EGC16355.1| YjgP/YjgQ family permease [Kingella denitrificans ATCC 33394] Length = 353 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 135/361 (37%), Gaps = 13/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY ++ T+ + L+ + + ++ ++ + NY+ + P Sbjct: 1 MKLLSRYLI---IRLTVMSAYALLALLALYNFIDLLSEKTGIGNYTFWHAVQFTLLQTPA 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++P TL+ ++ L+ SEL + + G I + + V S + + TVL+ Sbjct: 58 RAYLLMPLATLIGGLLALSQLSSNSELAVMKTSGWHISRFIGTIVQFSFIFAVITVLLGE 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA ++ + + W++ + I + + D + Sbjct: 118 WIAPQLSSYADNMKSTARSGQLSS-TRNGVWIKQPDSMVYI-----GSMLPDKTLLDISI 171 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKV---VEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + ++ A+ A++ + +L+ V + I + + ++ Sbjct: 172 WHYTPQFRLTEAIHAEKAVMRDQTWQLQNVQSSKITEERVIVQKQPARDWHMNTTNQLMD 231 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + SF + + + + K+N + ++ +V P+ + M L+A + + Sbjct: 232 VLLVKPEQMSFSALTQYIGYLKKNNQQTLA-YDVAWWNKLVYPVATMVMALVALAFTPVS 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R++ + + GI G + + + + + +A++P L L++ ++ ++ Sbjct: 291 GRNHNLGLKLFGGIGLGLLFFFTGRLFGFSAQLYGVPAFLSAVLPTALFACLAVFLIYRQ 350 Query: 359 E 359 E Sbjct: 351 E 351 >gi|24372947|ref|NP_716989.1| hypothetical protein SO_1369 [Shewanella oneidensis MR-1] gi|24347090|gb|AAN54434.1|AE015581_1 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 370 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 120/357 (33%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + LK + L + + I + + S A L +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASD-GEFPASLIATLIGLNLPYLV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +G+S W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-----WED 178 A E+ ++++ + + N + +F+ E D Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELEKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + +++L V YQ D Q Sbjct: 181 PNDEIGLTNVVVAKGGRVIEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + + + F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALPLGELLKIDGPEAVAE-------FHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + ++ + + ++ + + G++ + + + IL+L Sbjct: 294 VRQGKFAKMLP-AVLLYLGYFGLMVAGRKALQDGVIPLYLGMWWIHLSALIMGILLL 349 >gi|331654590|ref|ZP_08355590.1| putative permease [Escherichia coli M718] gi|331047972|gb|EGI20049.1| putative permease [Escherichia coli M718] Length = 386 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 381 >gi|301060831|ref|ZP_07201645.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300445080|gb|EFK09031.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 383 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 126/363 (34%), Gaps = 12/363 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L+RY F+ T L L + ++ + ++ +S+ A + +P I+ Sbjct: 2 TLYRYIFREIWPTFLASLFVFIFIMMAARMLS-ITELIVTRGVHLSQVAGMVLFLIPDIL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P +TL+ +V F L+ SE++ ++ GIS++Q+L P + S+ + V + Sbjct: 61 TFALPAVTLMSVVVAFLRLSADSEIIAMKSSGISLYQMLPPVIFFSLAACLACVAISTFA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G + DL+ + + + + + Sbjct: 121 APWGNRSFKDLLFKIAETKADLGIKERIFCEPFENLVFYVNSFSREERMLKDVFVVDRRD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK---------M 234 + N I+ + + + L + + + S T+ + Sbjct: 181 QEMTNTIVSDEAQIIPRPAERTITLLFLKGTIFMVEKNFEGSRTIKFNTYALNIGLKDVL 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + S ++I K+ + + R + + IPL + M +I + Sbjct: 241 ADLASRKKAPHELSVNQLISKLKST-PNTDKEYSRIMRELLEKLSIPLAVFFMGIIGVPL 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + R V + + Y + I++S +G L P A IP + I + + Sbjct: 300 GAQI-RGRGRSAGVGVSLVVFALYYLFLMIIRSIASTGALSPAFAVWIPDLFLIVSVVYL 358 Query: 355 LLQ 357 L + Sbjct: 359 LRR 361 >gi|126441903|ref|YP_001058063.1| hypothetical protein BURPS668_1013 [Burkholderia pseudomallei 668] gi|126221396|gb|ABN84902.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 383 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 118/379 (31%), Gaps = 27/379 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYERYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQAPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L V + + I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 I +++ + + + W+ + + F+ + P++ I Sbjct: 120 FIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-------------------Y 216 + K N R L V + Q Y Sbjct: 180 SDVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGAASPVDTLNPVY 239 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + +L + S + + + + + N R + + Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKE-NQQDTQRYDIALWR 298 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 KLLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPA 358 Query: 337 VAAALIPVILTISLSILIL 355 A +P + ++L + L Sbjct: 359 PLTAALPGCIYLALGLFAL 377 >gi|53718605|ref|YP_107591.1| putative permease [Burkholderia pseudomallei K96243] gi|167814687|ref|ZP_02446367.1| putative permease protein [Burkholderia pseudomallei 91] gi|167909936|ref|ZP_02497027.1| putative permease protein [Burkholderia pseudomallei 112] gi|52209019|emb|CAH34959.1| putative permease protein [Burkholderia pseudomallei K96243] Length = 383 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 118/379 (31%), Gaps = 27/379 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RYF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYERYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQAPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L V + + I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 I +++ + + + W+ + + F+ + P++ I Sbjct: 120 FIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-------------------Y 216 + K N R L V + Q Y Sbjct: 180 SDVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVY 239 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + +L + S + + + + + N R + + Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKE-NQQDTQRYDIALWR 298 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 KLLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPA 358 Query: 337 VAAALIPVILTISLSILIL 355 A +P + ++L + L Sbjct: 359 PLTAALPGCIYLALGLFAL 377 >gi|330752158|emb|CBL87118.1| predicted permease YjgP/YjgQ, transmembrane [uncultured Flavobacteria bacterium] Length = 359 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY F +L + FL M++ V D+++ + + + Sbjct: 4 LDRYIFFRFLGSFFLFLGLVMMIAVVFDISQKVDNFINKNADISTIIIDYYVNFLAFYGT 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I + I V + R SE+V + G+S +L+ PF++G+++L I + + + Sbjct: 64 TFSSLIVFLSTIFVTGRMARDSEIVAALTGGVSFPRLIKPFLLGALVLFIGNSTLSHFVI 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 I + + ++ I + + I + + L H + Sbjct: 124 PKTNIARIHFEDTYVQDKIIKRPINIHRQVLPDHYIYIETWSPERLGGYHFSYERFENDR 183 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN-STTLNIPIKMDGFQKFSEQ 243 + + D + + G + ++ + Sbjct: 184 MIEKLMADFVRYDTSQKQWQVDNWTLRTWLKSGEMKLESGRRLDTSFAFDPTTISPDLRS 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + +++K + S E +++ I P + + IA +S R Sbjct: 244 TSTMTSPQLLKYLKKERISGSEAITSHEMEWHKRIAYPFSVFILVFIAVVLS-SEKRRGG 302 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ + + + I A +P L L ++ ++ Sbjct: 303 IGGQIAIGLLIAVIYIFFMQLGGVLVSIPIFSAFMAIWLPNFLFTILGFVLYIR 356 >gi|167580135|ref|ZP_02373009.1| hypothetical protein BthaT_18420 [Burkholderia thailandensis TXDOH] Length = 383 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 119/379 (31%), Gaps = 27/379 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQAPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L V + + I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 I +++ + + + W+ + + F+ + P++ I Sbjct: 120 FIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-------------------Y 216 + K N R L V + Q Y Sbjct: 180 SDVRIYEFDSKFNLQNVRIAKSGRYQPPGHWLLTDVTDTQLTNLAGNGATAPNDTLNPVY 239 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + +L + S + + + + + N R + + Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKE-NQQDTQRYDIALWR 298 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 ++ P ++ M +++ + +R+ + V GI G T+ G Sbjct: 299 KLLYPFAVLVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPA 358 Query: 337 VAAALIPVILTISLSILIL 355 A +P + ++L + L Sbjct: 359 PLTAALPGCIYLALGLFAL 377 >gi|331648770|ref|ZP_08349858.1| putative permease [Escherichia coli M605] gi|331042517|gb|EGI14659.1| putative permease [Escherichia coli M605] Length = 386 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A+ ++ + + G+ + + + Sbjct: 147 WGASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 381 >gi|218696688|ref|YP_002404355.1| hypothetical protein EC55989_3395 [Escherichia coli 55989] gi|218353420|emb|CAU99485.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] Length = 386 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDV-NPGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S S ++ +++ ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNSFSVRQLNHYINYLQETGQPSS-EYRLALWEKLGHPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +A G+ G + + IM + G L AAL + + +++++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVY 380 >gi|114562103|ref|YP_749616.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] gi|114333396|gb|ABI70778.1| permease YjgP/YjgQ family protein [Shewanella frigidimarina NCIMB 400] Length = 370 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 109/349 (31%), Gaps = 14/349 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY LK LL + + + + + S L +P + Sbjct: 2 IVFRYLISEVLKAQFAVLLVLLTIFISQQFVRVLADASD-GEFPASLVMTLLGLNLPQLT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+V+ +G+S W + ++ + +FT + + Sbjct: 61 VLVLPLSFFLAILLAHGRMYAENEMVVLHGVGVSEWYVTRVTLLLAFANLLFTAYLSVYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 E+ ++++ + + N + +F+ D Sbjct: 121 GPWAEERQNQVLEKAQSEAGLAALTQGRFQASPNGRAVLFVEKINKDNTLDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + ++ I + +++L+K YQ ++ Q Sbjct: 181 PEDENGLTNIVVANKGRVIEDNIGSQQLQLEKGFRYQGSPKSLELQVIEFGGYKMEIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S I + + A +F + + IP+ + +TLIA ++ Sbjct: 241 EVDERRRKLSAMPIDELLDT-------PGPEAAAEFQWRLAIPIAIPLLTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 R + + I + ++ + + ++ Sbjct: 294 VRQGKFAK-MGPAILLYLGYFGLMIAGRKALQDEVVPQYLGMWWIHGFA 341 >gi|297565836|ref|YP_003684808.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296850285|gb|ADH63300.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 378 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/372 (9%), Positives = 119/372 (31%), Gaps = 25/372 (6%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + L G + + +I + + + + ++ ++P I Sbjct: 4 IDRYLLREILPPF---FFGIFLYIALIAFSNLLARAQWVGGVPVTSLLQWIGLQIPFIFT 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q +P TL+ ++ + L+R +EL++ +A GIS+ + ++G+ L F++ + + Sbjct: 61 QTLPLATLLGVLIGYSRLSRENELLVMQAGGISVLRTARWILLGAAALAGFSLYLSERVV 120 Query: 125 TSGEKI-GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + ++I + ++ Sbjct: 121 PWANQQTAVVWWDKVATGTSGLGWLTGRDLKIGDYLLLFDSYDNAHQEIVNVRLQQWKGQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + L +D+ L ++ + Sbjct: 181 TLSVVFAERGRLENYQLKLRGFRLYTLDLAKLPVPDFQSLDEVEQYLPQLVRAQNVSRDP 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP-------------------L 282 + + + ++ + F N + ++ + P + Sbjct: 241 QASLVITLPQNRDQLVANFAGGGFENPYPPSHWWRRLQNPTLTPTEAREARVNLHSALAV 300 Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 L + ++ ++ + R++ P + + + Y ++++ K SG++ Sbjct: 301 SLANLVILFLALPVAARRASSPAVALGLALGLTIAYYAVLSLGKLMALSGLIPAELGVWS 360 Query: 343 PVILTISLSILI 354 +L ++++ + Sbjct: 361 ANLLAVAVAFWL 372 >gi|331679053|ref|ZP_08379725.1| putative permease [Escherichia coli H591] gi|331073118|gb|EGI44441.1| putative permease [Escherichia coli H591] Length = 386 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S S ++ +++ ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNSFSVRQLNHYINYLQETGQPSS-EYRLALWEKLGHPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +A G+ G + + IM + G L AAL + + +++++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVY 380 >gi|325527103|gb|EGD04518.1| putative permease [Burkholderia sp. TJI49] Length = 382 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 117/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R + LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQKGSYEPPGHWLLKGVTETELTPIKPIAGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|237736826|ref|ZP_04567307.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420688|gb|EEO35735.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 112/358 (31%), Gaps = 13/358 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ +Y ++ + + F+ID+ + + SI + + +P Sbjct: 1 MKLIDKYILNEIKIPVIFGVSLFTFI-FLIDIIVAMMENIIVKGISIIDVMRILSFYLPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F RTSE A+G+S+ ++ P V + + +F + Sbjct: 60 ILSQTIPMGMFLGIMLTFSKFTRTSEATAMSAVGMSLRDIVKPIFVAACCVTLFIFFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I L + + ++ + + + ++ + + Sbjct: 120 SIIPRSVAKLQFLTAKIAYENPVFQLKEKTFIDEVD---EYNLYIDRMEGKEKKAKGILI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDG 236 + + A + + L Y + + + + + Sbjct: 177 FQKAEDKPFPTVIVGEEAYWKDSAMVLINSKFYNFNDKGKEVLRGEFDEKRIPLAAYFSE 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + + + + + + +P + ++L+ +S+ Sbjct: 237 IEVKVKDIEAMGIGTL---LKEMKDKTPAEKIPYKVEINKKLAVPFSTMMLSLLGVFLSI 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS + A + F T + + GI+ IP ++ L++ + Sbjct: 294 GHHRSGK-GANFALSLIVIFSYITCLNVGMVMATKGIIPAFIGVWIPNVILFLLTLFM 350 >gi|326567797|gb|EGE17901.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 12P80B1] Length = 369 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 128/368 (34%), Gaps = 18/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y + L ++G ++ V + + E Y+++ + R P + Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISET--YTLTDALLFILYRSPYFL 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q IP TL+ ++ L SEL++ RA G+SI+++++ ++ +++ ++ V + Sbjct: 63 VQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNQFV 122 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + W + + E + E Sbjct: 123 LPTANQHAATIRADTIYDKLITID--GYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQL 180 Query: 184 IDKK-------------NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 D + + +A A + ++ L + Sbjct: 181 KDGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTL 240 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 PI +++ S + R E F+ ++ P ++++ L+ Sbjct: 241 PIAPTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSL-RHELAFWQKLLSPFAVLSLVLV 299 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A+S RS + V + +G + + + + L P+ AL+P++L+ Sbjct: 300 ASSFVFGSLRSQGLALRVVLALLTGLLFSYLTDLTGFVALATGLSPLLMALVPIVLSAMA 359 Query: 351 SILILLQK 358 + +L +K Sbjct: 360 GMYLLNRK 367 >gi|261749332|ref|YP_003257017.1| hypothetical protein BPLAN_247 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497424|gb|ACX83874.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 361 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 113/357 (31%), Gaps = 7/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + L T ++ + I+ +IDL++ +++ Sbjct: 1 MKILDRYIIRNILVTFIFITILLQIISVIIDLSQRMHRLENNQGSIKDALIYYYPFWSIW 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I LN+ SE+ A GIS ++ P+++ + L+G+ +++ Sbjct: 61 LAYTFSPISVFLSIIFFTSRLNKHSEINAILASGISFKRITIPYLISASLIGMGALIINY 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 K+ Q+ + + + + ++ + + +I +D Sbjct: 121 SFLPLANKMKNKFHYQYLLSSRYKNKYENNQTISTQISNNEYLFIRNFSRKKNIGQDCIY 180 Query: 182 ITIDKKNKII-HRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGF 237 + I + + L E + N + + Sbjct: 181 QKFNGNKLIYLLKAKNIFWYKKHRIYILSNYSETYLNKNKDIFFKGVHKIQNFSMTPEEL 240 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + E+ K + K + ++Y P +TL+ S+S Sbjct: 241 LPEEYIAETMTISELRKFIDREKKRGNSNINTHLNEYYQRTSYPFSNFILTLLGLSIS-- 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S+ +P GI F+ I K + + + +P + ++ + Sbjct: 299 -SKKGEPAHNFIMGIILAFIYIFCTEISKVYSTKDYIPSYLSVWLPNGIFGMITFFL 354 >gi|55980366|ref|YP_143663.1| hypothetical protein TTHA0397 [Thermus thermophilus HB8] gi|55771779|dbj|BAD70220.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 347 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 107/355 (30%), Gaps = 12/355 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + L LL ++L + E+ + R P Sbjct: 1 MKTLDRYLLRETLPLFGGGLLVIVLLFLGGAVYEVLAPLVAK-GADPYTLLRYLLFRTPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P L +V+ L +EL A+G+ +LL PF++ + + L+ Sbjct: 60 ALARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G DL+++ + Q + + + Sbjct: 120 GLVPQALAKGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKVEGEAIGALRVLSREE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + ++ R + T + Sbjct: 180 VLLAERGSFRGGVLHVEEGTRITYEGSRPRTLARFQRGELVLKDLTFDPWQNPA------ 233 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + E+ K++ + + T +Y PL L A ++ Sbjct: 234 ---NRMTLAELRKEVQRLRQMGVRAGLE-ATTYYRRFAEPLAAPVFALFAVGLAFYLLGG 289 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ +V + + F Y ++ + G+ L P AA P +L +L + + L Sbjct: 290 SRSLGLVGVAVLTFF-YYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFL 343 >gi|114319720|ref|YP_741403.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226114|gb|ABI55913.1| permease YjgP/YjgQ family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 372 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/358 (10%), Positives = 105/358 (29%), Gaps = 11/358 (3%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L L LL ++ L L + + Sbjct: 10 DRYLVREVLFAWLAVLLVLFAVLATNRLIGYLGDAAG-GELPGGVILTLLGLQTVRYLGM 68 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 I+P + ++ F L R SE+ + A GI W+ + ++ L L+ Sbjct: 69 ILPASFFLGIVLAFGRLYRDSEMAVMSACGIGPWRQFRALLWLALPLAGLVGLLSLYWGP 128 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + + + + + + ++Q + + + + + F Sbjct: 129 AATQKAEQVQAEAEAQVEFAALQAGRFLQARGATEGTLYLERLSEDQREMEDVFIRAGGT 188 Query: 186 KKNKIIHRK---DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 ++ + + + L Y D + + Sbjct: 189 ADRVVLAARRGVQEKDPETGDRYLVLLDGWRYDGRPGAAD------WRVTRFERHGVLVA 242 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + + + + + + + + + +P M + + L+A +S R Sbjct: 243 EGSEEVAVRLRRNAQPTAELWGSDHPADRAEVQWRLAMPAMTLLLALLAVPLSKSAPRDG 302 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + + + +T+ + + ++G + +++ +L LL + D Sbjct: 303 RYG-RLLSAVLVYVGYFQFLTVGQDWLETGQVPAALGLWWLHGAVLAVGVLGLLWRFD 359 >gi|197121803|ref|YP_002133754.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] gi|196171652|gb|ACG72625.1| permease YjgP/YjgQ family protein [Anaeromyxobacter sp. K] Length = 371 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/363 (11%), Positives = 120/363 (33%), Gaps = 11/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G++ RY + L LL ++ + + + S+ ++ + +P Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFG-SGVSLVDVGLVMLSLMPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +IP L+ ++ L E+V A G+S +L+ ++ +++ + Sbjct: 60 LLGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + + + A+ EN + +D ++ Sbjct: 120 SVEPASIRAARLRLNEVVKRNVTNDVRGGTFYDQIPGYTIYAERARGGRWENVLIQDRSN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN-------IPIKM 234 H + + + ++ L++ ++ D S + + Sbjct: 180 PDAPMLALSRHGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAELLVGLGTAL 239 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIF-HNYRAETQFYFLIVIPLMLVAMTLIAAS 293 ++ + ++ + + + + R E + + PL++VA L+ Sbjct: 240 SDRNVLAKSSREATVSDLRARAAAAREKGDVVEARRQEGYLHRKLSAPLVVVAFALLGVP 299 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + R + + Y ++ + + G L A +P ++ ++ + Sbjct: 300 L--GAERRGGRAFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAVGVG 357 Query: 354 ILL 356 ++L Sbjct: 358 LVL 360 >gi|218691270|ref|YP_002399482.1| hypothetical protein ECED1_3629 [Escherichia coli ED1a] gi|218428834|emb|CAR09635.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] Length = 386 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 381 >gi|161524005|ref|YP_001579017.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189351234|ref|YP_001946862.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] gi|160341434|gb|ABX14520.1| permease YjgP/YjgQ family protein [Burkholderia multivorans ATCC 17616] gi|189335256|dbj|BAG44326.1| YjgP/YjgQ-like transporter [Burkholderia multivorans ATCC 17616] Length = 382 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDAKFQLKNVRIAQTGRYEPPGHWLLKGVTETELTPIQPIAGQAPDALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NHQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|221199306|ref|ZP_03572350.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221205792|ref|ZP_03578807.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221174630|gb|EEE07062.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221180591|gb|EEE12994.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 382 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDAKFQLKNVRIAQTGRYEPPGHWLLKGVTETELTPIRPIAGQAPDALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NHQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|134296647|ref|YP_001120382.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] gi|134139804|gb|ABO55547.1| permease YjgP/YjgQ family protein [Burkholderia vietnamiensis G4] Length = 382 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 117/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + +SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAASSEFTIFRVSGLATNQALRSLLKIGVPLVIITYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPIAGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSLINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|331643680|ref|ZP_08344811.1| putative permease [Escherichia coli H736] gi|331037151|gb|EGI09375.1| putative permease [Escherichia coli H736] Length = 386 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PF+ L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 87 TLVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 381 >gi|238028371|ref|YP_002912602.1| hypothetical protein bglu_1g28320 [Burkholderia glumae BGR1] gi|237877565|gb|ACR29898.1| Hypothetical protein bglu_1g28320 [Burkholderia glumae BGR1] Length = 382 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G Y+ + A + P Sbjct: 1 MRLYEKYFARQIYLTFIFVLFAFSGLFFFFDLISELNSVGH-GAYNFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP TL+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVATLISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS------------------------N 157 I +++ + + + W++ + Sbjct: 120 FIGPYTDQLSERVRLEALGSSVSSNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTI 179 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 I+ K +N + D L I D K + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAKSGRYAPPGHWLLTDVTDTQLTPIPPDSHAPKDALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +L + S + + + + + N + + Sbjct: 240 SEQVSMPQYSLRSDLTPQILSVLLVSPERMSIFNLFRYIQHLRE-NQQDTQTYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A +P ++ ++L + L Sbjct: 359 LTAALPALIYLALGLFAL 376 >gi|83720791|ref|YP_441377.1| hypothetical protein BTH_I0821 [Burkholderia thailandensis E264] gi|167618241|ref|ZP_02386872.1| hypothetical protein BthaB_18181 [Burkholderia thailandensis Bt4] gi|257139950|ref|ZP_05588212.1| hypothetical protein BthaA_12230 [Burkholderia thailandensis E264] gi|83654616|gb|ABC38679.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 383 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 118/379 (31%), Gaps = 27/379 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQAPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L V + + I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 I +++ + + + W+ + + F+ + P++ I Sbjct: 120 FIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-------------------Y 216 + K N R L V + Q Y Sbjct: 180 SDVRIYEFDSKFNLQNVRIAKSGRYQPPGHWLLTDVTDTQLTNLAGNGATAPNDTLNPVY 239 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + +L + S + + + + + N R + + Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKE-NQQDTQRYDIALWR 298 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 KLLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPA 358 Query: 337 VAAALIPVILTISLSILIL 355 A +P + ++L + L Sbjct: 359 PLTAALPGCIYLALGLFAL 377 >gi|282878370|ref|ZP_06287162.1| putative membrane protein [Prevotella buccalis ATCC 35310] gi|281299556|gb|EFA91933.1| putative membrane protein [Prevotella buccalis ATCC 35310] Length = 410 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 114/352 (32%), Gaps = 4/352 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + Y + ++ T +Y + + + V D NE ++ E + + A VP Sbjct: 53 IDWYIIRKFIGTYIYSIALIIAIAIVFDFNENLSKFTEYHAPARAIIFDYYANFVPYYSN 112 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 P + I L SE++ A GIS +L+ P+++ +L+ + + + Sbjct: 113 LFSPLFVFIAVIFFTSKLAGNSEIIAMLASGISFKRLMRPYMLSCVLIASLSYYLSASVI 172 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G I + ++++ + +D + I K D Sbjct: 173 PHGTVIRHNFESLYRNSRKQTAADNVQLQVGKGVIAYIQHYDNKTKRGYGFSLDKFENKK 232 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS---TTLNIPIKMDGFQKFS 241 + D + Q + S I ++ Sbjct: 233 LVSHMTAMEIQYDTIADSKYHWNVTGWKIRQLKGLREHITSGADLDTLIQMEPTDLVYSK 292 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q + + E+ +S + + + +++ I +T+I S+S R Sbjct: 293 GQQETFTSAELKDYISKQVDRGSSNVVQYQVEYHKRIASSFASFILTIIGFSLSAR-KRK 351 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + G+ + + T+ +F + P+ AA IP I+ ++ Sbjct: 352 GGMGLYLGLGLALSSLYILLQTVSATFAINANAPPILAAWIPNIIFALVAYF 403 >gi|170697654|ref|ZP_02888742.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] gi|170137402|gb|EDT05642.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria IOP40-10] Length = 382 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L I T ++ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYMIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGNLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPISGAPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|26249547|ref|NP_755587.1| hypothetical protein c3716 [Escherichia coli CFT073] gi|254162933|ref|YP_003046041.1| hypothetical protein ECB_02855 [Escherichia coli B str. REL606] gi|26109955|gb|AAN82160.1|AE016766_248 Hypothetical protein c3716 [Escherichia coli CFT073] gi|253974834|gb|ACT40505.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978989|gb|ACT44659.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|309703415|emb|CBJ02754.1| putative permease [Escherichia coli ETEC H10407] Length = 386 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 381 >gi|326559486|gb|EGE09909.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 7169] gi|326568201|gb|EGE18283.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis BC8] Length = 369 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 128/368 (34%), Gaps = 18/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y + L ++G ++ V + + E Y+++ + R P + Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISET--YTLTDALLFILYRSPYFL 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q IP TL+ ++ L SEL++ RA G+SI+++++ ++ +++ ++ V + Sbjct: 63 VQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNQFV 122 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + W + + E + E Sbjct: 123 LPTANQHAAAIRADTIYDKLITID--GYWSVNHDGDNQDVVYISYADNEGGLGEVKRYQL 180 Query: 184 IDKK-------------NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 D + + +A A + ++ L + Sbjct: 181 KDGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDEIGIGTSQVQQAHSEGKILTL 240 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 PI +++ S + R E F+ ++ P ++++ L+ Sbjct: 241 PIAPTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSL-RHELAFWQKLLSPFAVLSLVLV 299 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A+S RS + V + +G + + + + L P+ AL+P++L+ Sbjct: 300 ASSFVFGSLRSQGLALRVVLALLTGLLFSYLTDLTGFVALATGLSPLLMALVPIVLSAMA 359 Query: 351 SILILLQK 358 + +L +K Sbjct: 360 GMYLLNRK 367 >gi|301058948|ref|ZP_07199917.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446944|gb|EFK10740.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 355 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 120/357 (33%), Gaps = 9/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y +LK L +L +L +I+ + +G+ Y + +L +P Sbjct: 1 MKLLDIYIGSRFLKCFLLVILILAVLFSLIEFLSQLDDVGKGM-YRVENALLLVMLTLPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P L+ ++ L EL+ + GIS ++ P +L+ + + ++ Sbjct: 60 CLLDLLPISALLGGVISLGLLADHGELLAMQNAGISAPRVCAPVFATLMLVIMTSGIMAE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I E++ + + W +Q+ +I KIL E Sbjct: 120 TIIPDMEQMARKSRTRALYGAGVNVTRHGFW----ARRQNAYIHVHKILDEGVAAGVDIF 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQ 238 + I+ + + L + + + + S TL + D Sbjct: 176 EFDPRGRLKTFTHALSARILGHQQWSLTGIRQTVFKDRGVAIKGAASWTLEPFLSPDQVA 235 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S ++I + + + + +PL M L + + L Sbjct: 236 LLELSPYCLSTPDLIGYIKALED-GGQNADPYRLALWRKLGVPLTTGVMVLFSVTFVLGA 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +R + + G +LY ++ G L P A++PV+ L++ L Sbjct: 295 NRKVRAGSRITMASLIGLLLYFADQLIMHTGLLLNLNPPITAMLPVVFISGLAVWRL 351 >gi|194431684|ref|ZP_03063975.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|194420040|gb|EDX36118.1| putative permease, YjgP/YjgQ family [Shigella dysenteriae 1012] gi|320180990|gb|EFW55911.1| Permease Ygh-P2, YjgP/YjgQ family [Shigella boydii ATCC 9905] gi|332086635|gb|EGI91775.1| hypothetical protein SB521682_3569 [Shigella boydii 5216-82] gi|332088218|gb|EGI93339.1| hypothetical protein SD15574_3351 [Shigella dysenteriae 155-74] Length = 359 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++A +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVALMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|293416424|ref|ZP_06659063.1| hypothetical protein ECDG_03180 [Escherichia coli B185] gi|291431780|gb|EFF04763.1| hypothetical protein ECDG_03180 [Escherichia coli B185] Length = 359 Score = 105 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQAMQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIKDDKMWILHGVNHKKWLNGKETLDTSDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPS-SEYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|116690488|ref|YP_836111.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|170733809|ref|YP_001765756.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] gi|116648577|gb|ABK09218.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia HI2424] gi|169817051|gb|ACA91634.1| permease YjgP/YjgQ family protein [Burkholderia cenocepacia MC0-3] Length = 382 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPITGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|78067268|ref|YP_370037.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] gi|77968013|gb|ABB09393.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] Length = 382 Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIITYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLRNVRIAQTGRYEPPGHWLLKGVTETELTPIKPISGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|331684625|ref|ZP_08385217.1| putative permease [Escherichia coli H299] gi|331078240|gb|EGI49446.1| putative permease [Escherichia coli H299] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDNLPWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|254247470|ref|ZP_04940791.1| hypothetical protein BCPG_02268 [Burkholderia cenocepacia PC184] gi|124872246|gb|EAY63962.1| hypothetical protein BCPG_02268 [Burkholderia cenocepacia PC184] Length = 382 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLAANQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPITGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|107023406|ref|YP_621733.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] gi|105893595|gb|ABF76760.1| permease YjgP/YjgQ [Burkholderia cenocepacia AU 1054] Length = 382 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 117/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYITFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPITGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L+ + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLHSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|307310386|ref|ZP_07590034.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|306909281|gb|EFN39776.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062298|gb|ADT76625.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|323377117|gb|ADX49385.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSS-GGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ + S Sbjct: 180 DDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|114048399|ref|YP_738949.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] gi|113889841|gb|ABI43892.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-7] Length = 370 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 117/357 (32%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + LK + L + + I + + S A L +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASD-GEFPASLIATLIGLNLPYLV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +G+S W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILALINMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 A E+ ++++ + + N + +F+ D Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNELDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + ++ L V YQ D Q Sbjct: 181 PNDEIGLTNVVVAKGGRVQEDQNGSQQLHLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + M + F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALSLADLMKVEGPEAVAE-------FHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + ++ + + ++ + + G++ + + + IL+L Sbjct: 294 VRQGKFAKMLP-AVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLL 349 >gi|256019097|ref|ZP_05432962.1| hypothetical protein ShiD9_09284 [Shigella sp. D9] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ + S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|86147550|ref|ZP_01065860.1| putative permease [Vibrio sp. MED222] gi|85834589|gb|EAQ52737.1| putative permease [Vibrio sp. MED222] Length = 366 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 111/352 (31%), Gaps = 11/352 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASD-GDIPASLVLSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITATVAAFNSFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + ++ + + + +FI ++++ Sbjct: 121 SPWSQDKVEQMYEEVAAENSVDLLPKGKFARTPDGSSVVFIEGIDGNQLDNVFVSQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ K D+ + + + + ++ +D T + G ++ Sbjct: 181 DSVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPSRLDYRVTHFEEYEGLIGQREVE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ I + + RA+ + + + + L + +T++ +S R Sbjct: 241 KKGREWEAIPTIDLIGNQD-------NRAKAELQWRMSLVLCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + I + I+ KS + G + L + ++I Sbjct: 294 GRFAK-IGPAILIYLTYFLAISATKSSIEEGDIPAAIGMWPINALLLFVAIG 344 >gi|300973447|ref|ZP_07172203.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|301048206|ref|ZP_07195242.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299964|gb|EFJ56349.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300410789|gb|EFJ94327.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291259|gb|EFU50619.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 113/356 (31%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A+ ++ + + G+ + + + Sbjct: 120 WGASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDYLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|171316729|ref|ZP_02905941.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] gi|171098079|gb|EDT42894.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MEX-5] Length = 382 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 114/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 + +++ + Q W+ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAAHENGEQVTRFVNVGNLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R L V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLTGVTETELTPIKPISGAPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|86158887|ref|YP_465672.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] gi|85775398|gb|ABC82235.1| permease YjgP/YjgQ [Anaeromyxobacter dehalogenans 2CP-C] Length = 371 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 39/364 (10%), Positives = 114/364 (31%), Gaps = 13/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G++ RY + L LL ++ + + + S+ ++ + +P Sbjct: 1 MGLIDRYLAREILLPFAAALLFLTQILLATQILGQADVLFG-SGVSLVDVGLVMLSLMPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +IP L+ ++ L E+V A G+S +L+ ++ +++ + Sbjct: 60 LLGYVIPVAFLLGVVLGVGRLAEDREVVALGAAGLSPVRLVRVPLLLGLVVAALGAWLSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + + I+ + ++ S Sbjct: 120 SVEPASIRAARLRLNDVVKRNVTNDVRGGTFYDQIP-GYTIYTERARGGRWENVLIQDRS 178 Query: 182 ITIDKKNKIIHRKDA--------DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + R ++ +V ++V Y K + + Sbjct: 179 NPDAPMLALSRRGRLEPVGAGQDMRLVLEQGEVHREEVGTADYASAAFGKAELLVGLGTA 238 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF-HNYRAETQFYFLIVIPLMLVAMTLIAA 292 + ++ + ++ + + + + R E + + PL++VA L+ Sbjct: 239 LSDRNVLAKSSREATVSDLRARAAAAREKGDVVEERRQEGYLHRKLSAPLVVVAFALLGV 298 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + R + + Y ++ + + G L A +P ++ + + Sbjct: 299 PL--GAERRGGRAFGMGATFLLVVVHYLLLRGGEVLTQLGHLPAAFALQLPNLVLGAAGV 356 Query: 353 LILL 356 ++L Sbjct: 357 ALVL 360 >gi|300993118|ref|ZP_07180204.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] gi|300305133|gb|EFJ59653.1| hypothetical protein HMPREF9553_04258 [Escherichia coli MS 200-1] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A+ ++ + + G+ + + + Sbjct: 120 WGASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|260845739|ref|YP_003223517.1| hypothetical protein ECO103_3663 [Escherichia coli O103:H2 str. 12009] gi|257760886|dbj|BAI32383.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ + S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|85713126|ref|ZP_01044159.1| Predicted permease [Idiomarina baltica OS145] gi|85693042|gb|EAQ31007.1| Predicted permease [Idiomarina baltica OS145] Length = 371 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 125/359 (34%), Gaps = 18/359 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 +++Y LK+ + L+ M + + + E + S L + +P ++ Sbjct: 3 IFKYLIAETLKSQIAVLVVLMTIFVSQKFVRVLSDASE-GDIPSSIIFQLLSLNLPALLA 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IIP + ++ + +E+ + A G+S W + +V +++L + T + + Sbjct: 62 LIIPLSLFLGILLAHGRIYADNEMTVLHACGVSEWYVTRVTLVVAVILALLTAALTMYVV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + + Q SN + IFI ++ + Sbjct: 122 PWSLEQEQKIEDKARADSGLTALIPGRFQQSSNGKAVIFIQSQDDQGDLQNVFVAQHQAE 181 Query: 185 DKKNK-----IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT-LNIPIKMDGFQ 238 + + + + + + ++L+ + S + IK Sbjct: 182 QGRIRSGSVVVSTSGEVNTESSGSQWLELRDGKRFAGDGEHYQLMSFEQYRLQIKEQPVD 241 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ ++ S + + + + I IPL + +TLIA +S Sbjct: 242 EQLRDLEAYTVNELWQEQSNAAAAEL----------QWRIAIPLAMPLLTLIAVPLSRVN 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + +A I + ++ KS + G++ + + I +L + Sbjct: 292 PRQGKFA-RMAPAILIYLGYFLVLMAAKSAVRDGVIPTFIGLWWIHVALLVFGIALLSR 349 >gi|116327483|ref|YP_797203.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331903|ref|YP_801621.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120227|gb|ABJ78270.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125592|gb|ABJ76863.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 386 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 116/362 (32%), Gaps = 9/362 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 IL RY F + K + ++ ++ + +N+ A+ +P I Sbjct: 26 KILDRYLFGEFFKVFIGTVVLLTGIMLLSLVNDNMRNFTTTK-APRYHVALFLVYSLPKI 84 Query: 63 IQ-QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++ + + ELV A G+S ++++ P ++ IL+ I + V Sbjct: 85 ISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVAPLILFGILMWIVMLFVTE 144 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I K+ + + + + E + ++ Sbjct: 145 LIVRPVNKLAKIEHDILTEGMGTLANSVYQFHVKGKEGFYYLYFYDPNKDEINGGFNYIR 204 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDG 236 + D + + K+KKV E+ + +P Sbjct: 205 LRNDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDNDLKLSSQESFEEKEYELPEDPTY 264 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F+ + + +++ ++ + T+ + + +P+M + +TLI Sbjct: 265 FKIPAGSVEEMNLFQLKEEEKRRIQKG-LSYGDVLTEKHSVFALPMMTIIVTLIGTIAGY 323 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ + I + Y + KS G++G++ P I L + L + Sbjct: 324 FTKKTAGVA-SLGITIGVVLIYYIFNSAGKSLGENGVIPPFVGVWITPSLFLGLCFWMFR 382 Query: 357 QK 358 + Sbjct: 383 RM 384 >gi|157162459|ref|YP_001459777.1| YjgP/YjgQ permease [Escherichia coli HS] gi|188495921|ref|ZP_03003191.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209920455|ref|YP_002294539.1| hypothetical protein ECSE_3264 [Escherichia coli SE11] gi|300815539|ref|ZP_07095763.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|157068139|gb|ABV07394.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] gi|188491120|gb|EDU66223.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|209913714|dbj|BAG78788.1| conserved hypothetical protein [Escherichia coli SE11] gi|300531468|gb|EFK52530.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201893|gb|EFW76468.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323183568|gb|EFZ68965.1| hypothetical protein ECOK1357_3348 [Escherichia coli 1357] gi|323946694|gb|EGB42715.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018178|gb|EGB87397.1| hypothetical protein HMPREF9542_03233 [Escherichia coli MS 117-3] gi|324119791|gb|EGC13671.1| YjgP/YjgQ permease [Escherichia coli E1167] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ + S Sbjct: 180 DDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|206561016|ref|YP_002231781.1| putative permease [Burkholderia cenocepacia J2315] gi|198037058|emb|CAR52979.1| putative permease protein [Burkholderia cenocepacia J2315] Length = 382 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 116/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYITFIFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLKGVTETELTPIKPISGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|53725612|ref|YP_102445.1| hypothetical protein BMA0670 [Burkholderia mallei ATCC 23344] gi|67640814|ref|ZP_00439608.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|76811145|ref|YP_332584.1| hypothetical protein BURPS1710b_1173 [Burkholderia pseudomallei 1710b] gi|121600496|ref|YP_993650.1| hypothetical protein BMASAVP1_A2341 [Burkholderia mallei SAVP1] gi|124384824|ref|YP_001028888.1| hypothetical protein BMA10229_A2944 [Burkholderia mallei NCTC 10229] gi|126449595|ref|YP_001081199.1| hypothetical protein BMA10247_1655 [Burkholderia mallei NCTC 10247] gi|126453481|ref|YP_001065300.1| hypothetical protein BURPS1106A_1020 [Burkholderia pseudomallei 1106a] gi|134281127|ref|ZP_01767836.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167003638|ref|ZP_02269424.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167718521|ref|ZP_02401757.1| hypothetical protein BpseD_05832 [Burkholderia pseudomallei DM98] gi|167737553|ref|ZP_02410327.1| hypothetical protein Bpse14_05780 [Burkholderia pseudomallei 14] gi|167823141|ref|ZP_02454612.1| hypothetical protein Bpseu9_05658 [Burkholderia pseudomallei 9] gi|167844705|ref|ZP_02470213.1| hypothetical protein BpseB_05393 [Burkholderia pseudomallei B7210] gi|167893240|ref|ZP_02480642.1| hypothetical protein Bpse7_05710 [Burkholderia pseudomallei 7894] gi|167901697|ref|ZP_02488902.1| hypothetical protein BpseN_05420 [Burkholderia pseudomallei NCTC 13177] gi|167917973|ref|ZP_02505064.1| hypothetical protein BpseBC_05418 [Burkholderia pseudomallei BCC215] gi|217419559|ref|ZP_03451065.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226194459|ref|ZP_03790057.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237811280|ref|YP_002895731.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|242314384|ref|ZP_04813400.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177658|ref|ZP_04884313.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254181441|ref|ZP_04888038.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254190840|ref|ZP_04897347.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254196385|ref|ZP_04902809.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254199347|ref|ZP_04905713.1| putative membrane protein [Burkholderia mallei FMH] gi|254205663|ref|ZP_04912015.1| putative membrane protein [Burkholderia mallei JHU] gi|254259902|ref|ZP_04950956.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254357821|ref|ZP_04974094.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52429035|gb|AAU49628.1| membrane protein, putative [Burkholderia mallei ATCC 23344] gi|76580598|gb|ABA50073.1| membrane protein, putative [Burkholderia pseudomallei 1710b] gi|121229306|gb|ABM51824.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124292844|gb|ABN02113.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126227123|gb|ABN90663.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126242465|gb|ABO05558.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134247433|gb|EBA47518.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147748943|gb|EDK56017.1| putative membrane protein [Burkholderia mallei FMH] gi|147753106|gb|EDK60171.1| putative membrane protein [Burkholderia mallei JHU] gi|148026948|gb|EDK84969.1| putative membrane protein [Burkholderia mallei 2002721280] gi|157938515|gb|EDO94185.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698697|gb|EDP88667.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169653128|gb|EDS85821.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184211979|gb|EDU09022.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217396863|gb|EEC36879.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225933544|gb|EEH29533.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237504053|gb|ACQ96371.1| permease YjgP/YjgQ family protein [Burkholderia pseudomallei MSHR346] gi|238521609|gb|EEP85059.1| permease YjgP/YjgQ family protein [Burkholderia mallei GB8 horse 4] gi|242137623|gb|EES24025.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243060864|gb|EES43050.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254218591|gb|EET07975.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 383 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 118/379 (31%), Gaps = 27/379 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQAPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L V + + I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 I +++ + + + W+ + + F+ + P++ I Sbjct: 120 FIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-------------------Y 216 + K N R L V + Q Y Sbjct: 180 SDVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVY 239 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + +L + S + + + + + N R + + Sbjct: 240 RAQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKE-NQQDTQRYDIALWR 298 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 ++ P + M +++ + +R+ + V GI G T+ G Sbjct: 299 KLLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPA 358 Query: 337 VAAALIPVILTISLSILIL 355 A +P + ++L + L Sbjct: 359 PLTAALPGCIYLALGLFAL 377 >gi|46198337|ref|YP_004004.1| hypothetical protein TTC0029 [Thermus thermophilus HB27] gi|46195959|gb|AAS80377.1| hypothetical membrane spanning protein [Thermus thermophilus HB27] Length = 347 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 107/355 (30%), Gaps = 12/355 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + L LL ++L + E+ + R P Sbjct: 1 MKTLDRYLLREALPLFGGGLLVIVLLFLGGAVYEVLAPLVAK-GADPYTLLRYLLFRTPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P L +V+ L +EL A+G+ +LL PF++ + + L+ Sbjct: 60 ALARGAPVAYLFALLVLLSRLGEDAELKALLALGVRRERLLLPFLLLGTAIALAAFLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G DL+++ + Q + + + Sbjct: 120 GLVPQALAQGQDLLRREVLERPRALLTPGATFQDAQGRVVYVGKVEGEAIGALRVLSREE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + ++ R + T + Sbjct: 180 VLLAERGSFRGGVLHVEEGTRITYEGSRPRTLARFQRGELVLKDLTFDPWQNPA------ 233 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + E+ K++ + + T +Y PL L A ++ Sbjct: 234 ---NRMTLAELRKEVQRLRQMGVRAGLE-ATTYYRRFAEPLAAPVFALFAVGLAFYLLGG 289 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ +V + + F Y ++ + G+ L P AA P +L +L + + L Sbjct: 290 SRSLGLVGVAVLTFF-YYATWSVGRIMGEQNALDPFLAAFGPNLLYGALGLFLFL 343 >gi|191172563|ref|ZP_03034103.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|190907231|gb|EDV66830.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|324011926|gb|EGB81145.1| hypothetical protein HMPREF9533_04084 [Escherichia coli MS 60-1] Length = 359 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A+ ++ + + G+ + + + Sbjct: 120 WGASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|326388616|ref|ZP_08210209.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] gi|326206867|gb|EGD57691.1| permease YjgP/YjgQ [Novosphingobium nitrogenifigens DSM 19370] Length = 420 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 123/362 (33%), Gaps = 10/362 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + +Y + L + A L+ + + ++ + + + + A +P Sbjct: 7 IDKYIARLVFVPMLSVFVIAASLLVLDKMLKLFDFVATQGG-PVGIVFKMLANLMPEYAS 65 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IP ++ ++ F L +SEL + RA+G+S +LL + + +L +L+++ + Sbjct: 66 LAIPLGLMLGILLAFRKLATSSELDVMRAVGLSYTRLLRVPYILAFVLAALNLLIVSYVQ 125 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 +L + + + + + + ++ + Sbjct: 126 PLSRYYYEELQFELRSGALGASIKVGEFNSLQDRTALRVESSRDDGRQLQGIFARVVGKD 185 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI--------DKNSTTLNIPIKMDG 236 + I R+ A N + ++ + Q + S L I + Sbjct: 186 GQILVISAREGQFFANRENPDTVILRLTDGQIVQESPTIRNPRVLTFASHDLPIDLPKIE 245 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + F + + +S S Y++ +F +V M+ + ++A ++++ Sbjct: 246 QFRRRGDQDREYFLPELLHIGWSQDSTPQMRYQSLASLHFRLVEVAMMFLLPMLAMALAV 305 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS+ + V I + + + G + P A P + +L + + Sbjct: 306 PPKRSSS-SLGVFVSIILVVAYHKVNEYGQDVSSLGRIDPTIALWGPFFIFAALIMWMYW 364 Query: 357 QK 358 + Sbjct: 365 RL 366 >gi|291284362|ref|YP_003501180.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|290764235|gb|ADD58196.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|320656363|gb|EFX24270.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661734|gb|EFX29142.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666885|gb|EFX33861.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] Length = 359 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|312968689|ref|ZP_07782898.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312286907|gb|EFR14818.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 359 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDYLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|91212393|ref|YP_542379.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218560054|ref|YP_002392967.1| hypothetical protein ECS88_3361 [Escherichia coli S88] gi|237706274|ref|ZP_04536755.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073967|gb|ABE08848.1| hypothetical protein UTI89_C3401 [Escherichia coli UTI89] gi|218366823|emb|CAR04593.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|226899314|gb|EEH85573.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 386 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + + + + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQDTGQPSS-EYHLALWEKLGQPILTLAMILLAVPFTFSVPRS 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 381 >gi|113971161|ref|YP_734954.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117921444|ref|YP_870636.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] gi|113885845|gb|ABI39897.1| permease YjgP/YjgQ family protein [Shewanella sp. MR-4] gi|117613776|gb|ABK49230.1| permease YjgP/YjgQ family protein [Shewanella sp. ANA-3] Length = 370 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 119/357 (33%), Gaps = 14/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + LK + L + + I + + S A L +P ++ Sbjct: 2 IVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASD-GEFPASLIATLIGLNLPYLV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + +E+VI +G+S W + ++ +++ +FT + + Sbjct: 61 VLVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-----ENHIWED 178 A E+ ++++ + + N + +F+ D Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNDLDKVFVAQLPD 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + +++L V YQ D Q Sbjct: 181 PNDEIGLTNVVVAKGGRVLEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIKEQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + E+ S + + M + F++ + IPL + MTLIA ++ Sbjct: 241 QVDERRRKLSALPLTELMKVEGPEAVAE-------FHWRLAIPLAIPIMTLIAVPLARVN 293 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + ++ + + ++ + + G++ + + + IL+L Sbjct: 294 VRQGKFAKMLP-AVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLL 349 >gi|320352233|ref|YP_004193572.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] gi|320120735|gb|ADW16281.1| permease YjgP/YjgQ family protein [Desulfobulbus propionicus DSM 2032] Length = 360 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 133/360 (36%), Gaps = 7/360 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L+RY ++L+ + + L +ID E + E S S A +P II Sbjct: 3 LLYRYILAHFLRNLGMIMASFITLYLLIDFFEKIDNFLEK-GKSFSLIATFFFANIPFII 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P L+ +V LN ++EL+ +A GI + ++ P + ++ + + + + Sbjct: 62 DLMSPVCILLAGVVTLGVLNHSNELIALKACGIPLKKITVPIIGAALACTLLFLAMDQYV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + Q+ F + P+ +++++F+ Sbjct: 122 LPKTIAVTNQIWNKEIKGKVPLGIYRN--GRYYYRGQEGFYSFSRPDPQKNLFKNFSYTV 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ----YGRIPIDKNSTTLNIPIKMDGFQK 239 DK++ A++A+ L+ + + +N P D F Sbjct: 180 WDKEHAANTLIAAEIAVWNKGVWTLRNGQIQKAAGGDRFATQVFTNRRINFPETPDDFFV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + S ++ K+ + A+ + + + + + + + Sbjct: 240 PAYRSMELSLVQLYKETQHTRSEEERSKAWADFYGRISYTLLGLPLLLLGLPLLLLVYRK 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + F+ + + T ++S K+ + P+AAA+ +L + +LL+++ Sbjct: 300 WGRDLSLAIPVSCGMAFLCWGVYTTLQSLAKASYIPPLAAAISVHLLVGCVGFFLLLRED 359 >gi|115352568|ref|YP_774407.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|172061427|ref|YP_001809079.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] gi|115282556|gb|ABI88073.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria AMMD] gi|171993944|gb|ACB64863.1| permease YjgP/YjgQ family protein [Burkholderia ambifaria MC40-6] Length = 382 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 115/378 (30%), Gaps = 26/378 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFIFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + I L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGIPLVIITYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGNLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R L V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEPPGHWLLTGVTETELTPIKPISGAPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVTLPEYRLRSDLTPQILSVLLVSPERMSLINLFRYIQHLRE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILIL 355 A P ++ ++L + L Sbjct: 359 LTAATPGLIYLALGLFAL 376 >gi|315223961|ref|ZP_07865805.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea F0287] gi|314946065|gb|EFS98070.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea F0287] Length = 358 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 123/357 (34%), Gaps = 3/357 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T ++ + + ++DL+E ++M + ++ + + Sbjct: 1 MKILDWYILKRYLLTFFMMIILFIPIGIIVDLSEKVDKMIQK-GAPMNEILWYYLSFIVY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + + I L +E++ ++ G+S + L P++VG+ ++ + + Sbjct: 60 FANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + D ++ + + + N + + + + Sbjct: 120 FIVPAASTVYNDFWNKYIRSSKVESVSDLYNQFSDNDYLYVSSFNYQDKRGYNFSVEHFD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K + + + ++ K D Sbjct: 180 GIKMTEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDVIVKRDQLDTIFNFKPDDLMPME 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +++ +E+ K + + Y +TLI +VS R Sbjct: 240 YTAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAVSSVKKR- 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGK-SGILLPVAAALIPVILTISLSILILLQ 357 I + G+ GF + + + SG L P+ A L+P ++ ++L+IL+L + Sbjct: 299 GGMGINLMVGVVVGFSFVFFDRVFGTLAQSSGGLSPLMAVLLPNLIFLTLAILLLRK 355 >gi|281180020|dbj|BAI56350.1| conserved hypothetical protein [Escherichia coli SE15] gi|330909040|gb|EGH37554.1| permease Ygh-P2, YjgP/YjgQ family [Escherichia coli AA86] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A+ ++ + + G+ + + + Sbjct: 120 WGASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|323496138|ref|ZP_08101198.1| hypothetical protein VISI1226_19659 [Vibrio sinaloensis DSM 21326] gi|323318882|gb|EGA71833.1| hypothetical protein VISI1226_19659 [Vibrio sinaloensis DSM 21326] Length = 366 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 114/353 (32%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L +++ ++ + + + +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLLLVFISQTFIKVLGDATD-GDIPARLILAIVGLNIPQMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A G+ L+ + + + + Sbjct: 61 LLMLPMSLYLGILLTFGRLYSESEITVMNATGMGSKFLIRAAMSLAFITTALAAFNTLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A ++ LI+Q + + + +FI + K N+++ Sbjct: 121 APWSQEREAQLIEQVAAESSVDLLKAGQFQRTPDGSSVVFIDSIKDNQLNNVFVAQLRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVK--LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ ++ + + + Y+ +D T + G ++ Sbjct: 181 DAILPSVMFSNSGEVKEHSDGRQMIVMHDGTRYEGIPTRLDYMVTEFEQYSGLIGQREVE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + S+ S + + + I + + + +T++ +S R Sbjct: 241 AKRRGWGAVPTLDLIESSDLSA-------KAELQWRISLFVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + F+ + I+ KS + G + + +I + Sbjct: 294 GRFAK-MGPAILAYFVYFISISTTKSAIEDGNIPAAIGMWPINFALLVAAITV 345 >gi|323173776|gb|EFZ59405.1| hypothetical protein ECLT68_2094 [Escherichia coli LT-68] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ + S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G +L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFVLSAPVTALGLPIAFVLVALSLVYW 354 >gi|293412357|ref|ZP_06655080.1| predicted protein [Escherichia coli B354] gi|291469128|gb|EFF11619.1| predicted protein [Escherichia coli B354] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIFARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ +G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIAGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|283833699|ref|ZP_06353440.1| putative permease [Citrobacter youngae ATCC 29220] gi|291071385|gb|EFE09494.1| putative permease [Citrobacter youngae ATCC 29220] Length = 360 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 113/359 (31%), Gaps = 7/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY +Y + L +L + + Y + ++ +P Sbjct: 1 MNIFSRYLIRYVFIGFAAAAGILLPLFTTFNLINELDDVS-PGGYRWPQAVIVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + PFI L+ I +L++T EL R+ G+SI+++ + +++ + Sbjct: 60 NLIDLSPFIALLGGIAGLGHLSKTMELTAIRSTGLSIFKIAMITLTAGVMIIALLAVTDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA ++ + + + I K + +N Sbjct: 120 WIAAPLQQHALRIRTTAMAQDPNADHQKNNMLWARRGDAFATI--KSLDAKNQPVGIEIF 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKV---VEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + ++ N L+ V + Sbjct: 178 HYRPDLSLETYIYAEKGRVLKNGTWTLEGVYEKRWLDGRETTEVHKQQQWKSIFTRINLE 237 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S S ++ +S+ + + + PL+ +AM L+A + Sbjct: 238 MLTMPAGSFSIKQLRSYISYLQDTGQPSI-EFRVALWQKLGRPLLTLAMMLLAIPFTFSI 296 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS +A G+ G + Y I+ + G L L P + + ++++++ + Sbjct: 297 PRSPGIGSRLAMGVIVGLLTYISDQIIVNIGILFDLQVQLTVLCPPVALLIIALILVSR 355 >gi|218701754|ref|YP_002409383.1| hypothetical protein ECIAI39_3474 [Escherichia coli IAI39] gi|227887686|ref|ZP_04005491.1| inner membrane protein [Escherichia coli 83972] gi|301019929|ref|ZP_07184064.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371740|emb|CAR19591.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835082|gb|EEJ45548.1| inner membrane protein [Escherichia coli 83972] gi|299882027|gb|EFI90238.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555074|gb|ADN47849.1| putative permease [Escherichia coli ABU 83972] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ ++ S Sbjct: 180 DDLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|215488305|ref|YP_002330736.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] gi|215266377|emb|CAS10814.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVDVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETQETSDYLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PRMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|222034702|emb|CAP77444.1| hypothetical protein LF82_487 [Escherichia coli LF82] gi|312947540|gb|ADR28367.1| hypothetical protein NRG857_14785 [Escherichia coli O83:H1 str. NRG 857C] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|121730751|ref|ZP_01682851.1| conserved hypothetical protein [Vibrio cholerae V52] gi|121627676|gb|EAX60335.1| conserved hypothetical protein [Vibrio cholerae V52] Length = 289 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 95/290 (32%), Gaps = 2/290 (0%) Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 L+ ++ L +SELV+ +A G S + + +I L I L+ A + Sbjct: 1 MAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQ 60 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 K+ D+ G W + +N I + L ++W + + Sbjct: 61 KMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDENKKLSTVI 120 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 L ++V + D + + S Sbjct: 121 FSEQVDYVANNEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVVTVKPEELS 179 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + + + ++ + R E + + P+ + M L+A S RS + Sbjct: 180 LTGLSDYVHYLK-ASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGARI 238 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 G+ +GF Y L P+ AL P ++ +++++ +L +K Sbjct: 239 LSGVIAGFTFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 288 >gi|293449327|ref|ZP_06663748.1| hypothetical protein ECCG_02358 [Escherichia coli B088] gi|291322417|gb|EFE61846.1| hypothetical protein ECCG_02358 [Escherichia coli B088] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDV-NPGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S S ++ +++ ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNSFSVRQLNHYINYLQETGQPSS-EYRLALWEKLGHPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +A G+ G + + IM + G L AAL + + +++++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVY 353 >gi|256820810|ref|YP_003142089.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] gi|256582393|gb|ACU93528.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] Length = 358 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 124/357 (34%), Gaps = 3/357 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K YL T ++ + + ++DL+E ++M + ++ + + Sbjct: 1 MKILDWYILKRYLLTFFMMIILFIPIGIIVDLSEKVDKMIQK-GAPMNEILWYYLSFIVY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + + I L +E++ ++ G+S + L P++VG+ ++ + + Sbjct: 60 FANILFPILLFLSIIWFTSKLANNTEIIAIQSSGVSYMRFLRPYIVGASIISVIVFFMGM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + D ++ + + + N + + + + + Sbjct: 120 FIVPAASTVYNDFWNKYIRSSKVESVSDLYNQFSDNDYLYVSSFNYQDKRGYNFSVEHFN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + K + + + ++ K D Sbjct: 180 GIKMTEKINAETIQWIDSTKTYRLTNYSKRKIGEGDDVIVKRDQLDTIFNFKPDDLMPME 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +++ +E+ K + + Y +TLI +VS R Sbjct: 240 YTAENKNLFELNKFIEREKMKGSPNLNMYLLVKYRRWGAISTAFILTLIGVAVSSVKKR- 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGK-SGILLPVAAALIPVILTISLSILILLQ 357 I + G+ GF + + + SG L P+ A L+P ++ ++L+IL+L + Sbjct: 299 GGMGINLMVGVVVGFSFVFFDRVFGTLAQTSGGLSPLMAVLLPNLIFLTLAILLLRK 355 >gi|72382010|ref|YP_291365.1| putative permease [Prochlorococcus marinus str. NATL2A] gi|72001860|gb|AAZ57662.1| unclassified ABC-type transport system permease [Prochlorococcus marinus str. NATL2A] Length = 395 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 107/367 (29%), Gaps = 15/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ L + + ++ + + + S + ++P + Sbjct: 24 LLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLPSFV 83 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + +LN SE+ ++IGIS+++L+ P ++ SI + T + N I Sbjct: 84 VISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRLILPGLILSIFMSYMTFIFNNNI 143 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI----------SNPQQDIFIGAKKILPEN 173 S K ++ + + + Sbjct: 144 VPSTNKNAEIILANSLGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFIDG 203 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLN 229 + + + + + + + + S Sbjct: 204 QMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSNTRTKFLSFLYP 263 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLMLVAMT 288 + ++ + + + E M S R + + I +P+ Sbjct: 264 LGTELTNIAQLPKDANDMNLGEANTAMKLYQSSGNIKEARRMKVRIQEKITLPIACSVFA 323 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI S + R I + Y + S G GI+ P AA PV L++ Sbjct: 324 LIGCSFGVMQKRGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSPVFLSM 383 Query: 349 SLSILIL 355 +L Sbjct: 384 LGGGFLL 390 >gi|170681358|ref|YP_001745244.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|170519076|gb|ACB17254.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y + ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTLAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ ++ S Sbjct: 180 DDLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPS-SEYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGVGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|193062018|ref|ZP_03043114.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300824069|ref|ZP_07104190.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669796|ref|ZP_08370641.1| putative permease [Escherichia coli TA271] gi|192932238|gb|EDV84836.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|300523459|gb|EFK44528.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331062709|gb|EGI34623.1| putative permease [Escherichia coli TA271] Length = 359 Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 117/355 (32%), Gaps = 2/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S S ++ +++ ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNSFSVRQLNHYINYLQETGQPSS-EYRLALWEKLGHPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +A G+ G + + IM + G L AAL + + +++++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVY 353 >gi|157155522|ref|YP_001464443.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|193067447|ref|ZP_03048415.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|260869741|ref|YP_003236143.1| hypothetical protein ECO111_3808 [Escherichia coli O111:H- str. 11128] gi|157077552|gb|ABV17260.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|192959404|gb|EDV89839.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|257766097|dbj|BAI37592.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|323178688|gb|EFZ64264.1| hypothetical protein ECOK1180_2420 [Escherichia coli 1180] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIKDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFTAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|307139669|ref|ZP_07499025.1| hypothetical protein EcolH7_16278 [Escherichia coli H736] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PF+ L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 60 TLVELSPFVALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|257126590|ref|YP_003164704.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] gi|257050529|gb|ACV39713.1| permease YjgP/YjgQ family protein [Leptotrichia buccalis C-1013-b] Length = 358 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 122/357 (34%), Gaps = 6/357 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L +Y Y+K+ + ++ ++ + + + + + S +P Sbjct: 1 MNK-LDKYIIVNYVKSFILGMMMFFLIFLLAESITLTGWLMD-GKLKGSEALKYLRYGIP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ +++ + + E+ + GIS ++ ++ S L+ + + Sbjct: 59 EIVTNTAPLGVLLGSLLCISKMAKQLEVAAMKTSGISFARVALFPILFSALVSLGVFWLN 118 Query: 121 NPIATSGEKIGIDLIQ-QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 DL + + + +++I A K + Sbjct: 119 YDYLGRANTKKEDLKTLKIDNKEPVRSEKDFVFVKIDKRTVLFSGHANKNNGTMNYVTIL 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-KNSTTLNIPIKMDGFQ 238 K + ++ ++ K + EY ++ M+ Sbjct: 179 KFENGFKVIRKMYTASFAKINPKTNEWTFKDLKEYDSKTNVTKPFDTKKFKFVASMEDVL 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + + E+ +K + + +FY+ I L + M+LI S+ + Sbjct: 239 ASAVKAKNLTMPELREKTVYFTRVGADSLN-LRIEFYYRISFALSSLVMSLIGLSLGSRY 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + G+ Y + TI++S SG + A +P+I+ + + I + Sbjct: 298 VR-GGAAVNIGLSVIIGYAYYGVSTILRSMAVSGTVPIYVACFVPLIIFLVVGIKLF 353 >gi|323978946|gb|EGB74026.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFMLVALSLVYW 354 >gi|296115280|ref|ZP_06833920.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295978183|gb|EFG84921.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 372 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 129/359 (35%), Gaps = 2/359 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G+L Y + L + L+ V+ L E ++ + +S A R+PL+ Sbjct: 14 GVLVGYLTRELLSKIFITAAVIIALMEVLALLEEVTEIMSR-HLGLSGVLYYAVIRLPLL 72 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 +P L+ ++ L ++E+ I RA G+S L F+ + LG+ V+V + Sbjct: 73 FGNAMPLAVLIGALITLVQLTSSNEISIMRAAGLSTAGLFRLFLPAVLGLGVLCVVVDDQ 132 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 +A E + D+ ++ + L + ++ Sbjct: 133 VAPRSEIAQARWWNSTAPAPNGVTRDVWFRTGMTLVNIGGVAHGGRELHDVTVYRRDDEG 192 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS-TTLNIPIKMDGFQKFS 241 + K + + L + + + + ++ TL+ P + Sbjct: 193 ALQKVIHLPTVRYFINRWSGVPDHALTVLSPTRVEDVALQDDTRLTLDWPRALTPDVLLQ 252 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + ++ + + T+ I++PL M L+A V R+ Sbjct: 253 MSENTPLSIMTMVRVLHNAFPSSQSPAFFMTEILGRIMLPLTFTVMLLLAIPVVYIPPRA 312 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + + +G + ++++ G +G L V A + +++ I + +LL+ E+ Sbjct: 313 GARSWLPVWCLGAGLVFVVFQGLLRALGNAGTLPSVVAVFVGIVIFILGVVTVLLRIEE 371 >gi|170018762|ref|YP_001723716.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|297517383|ref|ZP_06935769.1| hypothetical protein EcolOP_07055 [Escherichia coli OP50] gi|300916914|ref|ZP_07133617.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923636|ref|ZP_07139664.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300950817|ref|ZP_07164703.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958360|ref|ZP_07170501.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|312972760|ref|ZP_07786933.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|169753690|gb|ACA76389.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378535|emb|CAQ33321.1| ybl135 [Escherichia coli BL21(DE3)] gi|284923006|emb|CBG36098.1| putative permease [Escherichia coli 042] gi|300314944|gb|EFJ64728.1| hypothetical protein HMPREF9547_04074 [Escherichia coli MS 175-1] gi|300415884|gb|EFJ99194.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420077|gb|EFK03388.1| hypothetical protein HMPREF9548_01829 [Escherichia coli MS 182-1] gi|300449912|gb|EFK13532.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|310332702|gb|EFP99915.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936016|gb|EGB32311.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941919|gb|EGB38098.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|332344938|gb|AEE58272.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVALSLVYW 354 >gi|332704119|ref|ZP_08424207.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554268|gb|EGJ51312.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] Length = 396 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 115/358 (32%), Gaps = 12/358 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 + FK L T + L + L+ + + ++ + + L P +Q ++ Sbjct: 14 HVFKELLLTFIICLGSLLTLILIGRML-QLKELFLGQSLGVMEIGRLFFYLSPFFLQLLM 72 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P ++ + F ++ EL+ +A G+S+++LL V+ L + + V + G Sbjct: 73 PISCMLAIFLTFLRISSDRELIALKAGGVSLYKLLPSPVLFCCLCCVANLAVAFWGISWG 132 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + ++ N + + E + S + Sbjct: 133 MDNFRAEVLEFARNRTQIMIQPGTFNSDFPGLTIFAEQYDPGNKEMRLIFVQDSRGDETS 192 Query: 188 NKIIHRKDADLAIIYNDKVKL----------KKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 I+ K + +++ K + + N Sbjct: 193 ATIVAEKGRVVTDKERGRLQFLLNDGAIYRTAKDQVHTLKFVSYLVNLDIWKTFNAEQLS 252 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + + + K + + + + +P+ + + L A + Sbjct: 253 ETRPREMSIMNLRRLAADPDLAKKRDEDYVRKVNVEIQKRYTLPVACLVLGLFALPFACS 312 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 F + + V + + Y++ +I S G+SG L P +P ++ +I + Sbjct: 313 FQ-GVKQYVGVLMALGMFIVYYSLYSISISLGESGFLAPWIGLWLPNVIFFVSAIFGI 369 >gi|260857119|ref|YP_003231010.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257755768|dbj|BAI27270.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVVLVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIKDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFTAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|229588597|ref|YP_002870716.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360463|emb|CAY47320.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 372 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 112/356 (31%), Gaps = 6/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAAS-GALDPGSLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL ++ + + + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G ++ + + + + + + + + Sbjct: 121 APQGAMQFQLVLNKQDAMTEFDTLEPGRF--QALNDGSRVTYTETLTDDRANLGGVFISE 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 R + L + Y + + + + + Sbjct: 179 KRLGQDKKDRGISVLVADSGRQEVRPDGSRYLILENGYRYDGSPGMADYRAIKYDTYGVM 238 Query: 244 FASRSFYEIIKKMSFSNKSNIF--HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A + + ++F + R+ Q + + +PL++ +TL+A ++ R Sbjct: 239 LARPDISDEVTDRDAIPTMDLFGSNELRSIAQLQWRLSLPLLVFIVTLMAVPLARVNPRQ 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + I T++ + G L P + +++ + +L Sbjct: 299 GR-FLKLLPAILLYMAYLTMLISAHGAVEKGKLSPTLGLWWVHGIFLAIGLGLLYW 353 >gi|312795336|ref|YP_004028258.1| hypothetical protein RBRH_03152 [Burkholderia rhizoxinica HKI 454] gi|312167111|emb|CBW74114.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 382 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 117/382 (30%), Gaps = 26/382 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY K T + L L F DL N +G NY S + + P Sbjct: 1 MRLYERYLAKQVYLTFAFILFAFSGLFFFFDLISELNAVGH-GNYKFSYAVLRVMLQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + +SE I R G+S + L + + + + T ++ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAASSEFTIFRVSGLSTHRALGSLLKIGVPIVVLTFVIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ------DIFIGAKKILPENHI 175 I +++ + + + W++ + P F+ ++ P+ I Sbjct: 120 IIGPYTDQLSERVRLEALGSSVSSNFQSGVWVKDTVPGNGATAQVTRFVNVGELKPDATI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI---------------- 219 + R + + LK V E Q + Sbjct: 180 SNVRIYEFDSQFRLADVRTAQSGRYMRPGQWLLKGVTETQLHDVAPAAATAKDVLNPVYK 239 Query: 220 --PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + + + S + + + N R + Sbjct: 240 SAQVSMPEYPMRSELTPQILSVLLVAPDRMSMTNLFSYVQHLRE-NHQDAQRYVIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P ++ M +++ + +R+ + V GI G T+ G Sbjct: 299 VLYPFAVLVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAP 358 Query: 338 AAALIPVILTISLSILILLQKE 359 A P ++ ++L + L + Sbjct: 359 LTAATPGLIYLALGLFALRWAD 380 >gi|191169423|ref|ZP_03031162.1| putative permease, YjgP/YjgQ family [Escherichia coli B7A] gi|309794090|ref|ZP_07688515.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|190900537|gb|EDV60347.1| putative permease, YjgP/YjgQ family [Escherichia coli B7A] gi|308122497|gb|EFO59759.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 359 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 118/355 (33%), Gaps = 2/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S S ++ +++ ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNSFSVRQLNHYINYLQETGQPSS-EYRLALWEKLGHPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 +A G+ G + + IM + G L AAL + + +++++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVY 353 >gi|77919518|ref|YP_357333.1| hypothetical protein Pcar_1922 [Pelobacter carbinolicus DSM 2380] gi|77545601|gb|ABA89163.1| conserved hypothetical membrane protein [Pelobacter carbinolicus DSM 2380] Length = 418 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 116/361 (32%), Gaps = 13/361 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + L L L +++ + + + + + +L A +P + Sbjct: 33 IQRYLLRETLVPMLLGLAVFTLVLLLGRILNLVELVINK-GVPLVDVLLLLAYLLPTFLV 91 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ + F ++ E++ +A G+ + QL P V +L+ + T I Sbjct: 92 LTLPLSFLLGVMAGFGRMSADREILALKACGVGLRQLTAPIVGLGLLVSLATAATTIAIK 151 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDFTSI 182 + E + + + + + + D Sbjct: 152 PASEDLFREKLFHIASSRANIGIQAQIFNDEFEGIILYANDVDERSGRMQGVFISDERDD 211 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ--------YGRIPIDKNSTTLNIPIKM 234 T+ + + L+ ++ + I + L++ Sbjct: 212 TLSSIILANEGRIFSNQENLTLTLHLENGTIHRQRRETGSGFQVIEFTRYDLNLDLGQTS 271 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + + + E+ + + + +F++ + +P++ + L+ + Sbjct: 272 MSADQPRKNKKTMTLGELYQAIRPDAATPPSKKRELLAEFHWRLAVPVIPLLFALLGVPL 331 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ RS + A G+ Y ++++ + L + P + + SI++ Sbjct: 332 GIQPVRSGR-GSGFAAGLLVFLAYYVLLSLAGTLVVDAGLPGLI-MWGPNSIFLLASIVV 389 Query: 355 L 355 L Sbjct: 390 L 390 >gi|301325677|ref|ZP_07219138.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847532|gb|EFK75292.1| conserved hypothetical protein [Escherichia coli MS 78-1] Length = 359 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L + SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLAKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFMLVALSLVYW 354 >gi|187734829|ref|YP_001876941.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] gi|187424881|gb|ACD04160.1| permease YjgP/YjgQ family protein [Akkermansia muciniphila ATCC BAA-835] Length = 363 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 120/356 (33%), Gaps = 4/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + L T ++ L+ + +L + + IS +P Sbjct: 1 MKILDRYIARQLLGVTALGVMALSALLLLGNLFKELRPLLVENKAPISIVLEFIFQVIPF 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP+ L ++V+ L +EL R G+S+W+L P + I L + Sbjct: 61 SLMFSIPWGFLTAVLLVYGRLASDNELTSMRMSGMSLWRLSAPAIAIGIALSGLCYWINI 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP-QQDIFIGAKKILPENHIWEDFT 180 IA ++ +L+ + K + + + + I ++ HI++ Sbjct: 121 DIAPRAKQSISELLIKAASINPKGLLNEGQAITKFDNLEIYIDKRVDDVIHGMHIYQKAD 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST--TLNIPIKMDGFQ 238 + + L + I ++ T + + I +D + Sbjct: 181 DKSPSVAMHSERVTMDFSPEKKILTLHLINPLITTQEEGSISQSVTMDEMPLSINLDKSR 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + EI + + + T+ L + LI +++ Sbjct: 241 SRRIKANRFTNREIREALDTPGYLDKKQTTEFATELPRRASFSLACIVFALIGVPLAIN- 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +R A GI + + + K+ +LP +P I+T+++++ + Sbjct: 300 TRRKDTSTGFALGILIASLYFLALIFADLSRKNDTMLPYILLWLPNIITVAVALHL 355 >gi|300931863|ref|ZP_07147160.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331664593|ref|ZP_08365499.1| putative permease [Escherichia coli TA143] gi|300460286|gb|EFK23779.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|331058524|gb|EGI30505.1| putative permease [Escherichia coli TA143] Length = 359 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ ++ S Sbjct: 180 DDLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|320195129|gb|EFW69758.1| Permease Ygh-P2, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 359 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|306816678|ref|ZP_07450810.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|331659261|ref|ZP_08360203.1| putative permease [Escherichia coli TA206] gi|305850243|gb|EFM50702.1| hypothetical protein ECNC101_08669 [Escherichia coli NC101] gi|315297644|gb|EFU56921.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053843|gb|EGI25872.1| putative permease [Escherichia coli TA206] Length = 359 Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|84387840|ref|ZP_00990855.1| putative permease [Vibrio splendidus 12B01] gi|84377355|gb|EAP94223.1| putative permease [Vibrio splendidus 12B01] Length = 366 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 109/352 (30%), Gaps = 11/352 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFISVLADASD-GDIPASLILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITASVAAFNSFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + ++ + + +FI +++ Sbjct: 121 SPWSQDKVEQMYEEVAAENSVDLLPKGKFEGTPDGSSVVFIDDIDGNKLENVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ K D+ + + + + ++ +D T + G ++ Sbjct: 181 DSVLPSVMFSKSGDVKELSDGRQVIVMYDGTRHEGVPTRLDYMVTHFEEYEGLIGQREVE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ ++ + S + + + I + L + +T++ +S R Sbjct: 241 KKGRDWEAIPTLELIGNPENSA-------KAELQWRISLVLCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + I + I+ KS + G + V L + ++I Sbjct: 294 GRFAK-IGPAILIYLTYFLAISATKSSIEEGSIPAVVGMWPINALLLFVAIG 344 >gi|94263394|ref|ZP_01287208.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93456230|gb|EAT06364.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 124/361 (34%), Gaps = 8/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + L G + + ++D E + + ++PL Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDNFLD-AGLGTGGAVRYLLLKIPL 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II+Q++P L+ I+ LNR EL+ +A G+S +++ P ++ + + + Sbjct: 60 IIEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGMASSQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + L Q ++ I +I Q+ + + DF+ Sbjct: 120 WLLPPTMSELNRLWHQEVRQ--QENRGIERQGRIYYRGQEGIYSFRPAADSENRLADFSY 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVV-----EYQYGRIPIDKNSTTLNIPIKMDG 236 +T D+ ++ A A K L++ + L +P + Sbjct: 178 LTWDRDYRLAQLIFAARATWDGRKWLLEEGQLKEKANGDDDFVVDYFERRQLALPEEPAD 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F + R+ + + + S + R Q + + + + I +++ Sbjct: 238 FFIPPYALSERALSTLFSQATASADTPQRRQARLAIQHKISYIFLGLPLLLIGIPLLLAM 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + F F+ + + + +S +G L P AA +L ++ Sbjct: 298 SRGRGRDLALAIPAASFLAFITWGLWSFGQSLAAAGQLPPFVAAWALHLLAAGGGWYLIK 357 Query: 357 Q 357 + Sbjct: 358 R 358 >gi|323188591|gb|EFZ73876.1| hypothetical protein ECRN5871_3010 [Escherichia coli RN587/1] Length = 359 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLEQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|194436708|ref|ZP_03068808.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|256024435|ref|ZP_05438300.1| hypothetical protein E4_13754 [Escherichia sp. 4_1_40B] gi|194424190|gb|EDX40177.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] Length = 359 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ ++ S Sbjct: 180 DDLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLMALSLVYW 354 >gi|28899417|ref|NP_799022.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839665|ref|ZP_01992332.1| inner membrane protein YjgP [Vibrio parahaemolyticus AQ3810] gi|260879348|ref|ZP_05891703.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260895693|ref|ZP_05904189.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|260900265|ref|ZP_05908660.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|28807653|dbj|BAC60906.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149746808|gb|EDM57796.1| inner membrane protein YjgP [Vibrio parahaemolyticus AQ3810] gi|308087429|gb|EFO37124.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466] gi|308093070|gb|EFO42765.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308107549|gb|EFO45089.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037] gi|328471446|gb|EGF42341.1| putative permease [Vibrio parahaemolyticus 10329] Length = 366 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 35/349 (10%), Positives = 103/349 (29%), Gaps = 7/349 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + + +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASD-GDIPAGLIFSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSGVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L +Q + + +FI K ++++ Sbjct: 121 SPWSQDRVEHLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + + Sbjct: 181 DSVLPSVMFSSSGEVKELSDGRQVITMQEGTRYEGVPTRVEYMITKFDEYEGVIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + A+ + + I + + + +T++ +S R + Sbjct: 241 QKGRDWEAYPT-----ADLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + I+ KS + G + + + ++I Sbjct: 296 FAK-MGPAILIYLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAI 343 >gi|254229296|ref|ZP_04922714.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262393202|ref|YP_003285056.1| hypothetical protein VEA_002429 [Vibrio sp. Ex25] gi|151938220|gb|EDN57060.1| putative permease, YjgP/YjgQ family [Vibrio sp. Ex25] gi|262336796|gb|ACY50591.1| putative membrane protein [Vibrio sp. Ex25] Length = 366 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 35/349 (10%), Positives = 103/349 (29%), Gaps = 7/349 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + + +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASD-GDIPAGLIFSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSAVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L +Q + + +FI K ++++ Sbjct: 121 SPWSQDRVEQLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDNTLSNVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + + Sbjct: 181 DSVLPSVMFSSSGEVKELSDGRQVITMKEGTRYEGVPTRVEYMITKFDEYEGVIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + A+ + + I + + + +T++ +S R + Sbjct: 241 KKGRDWEAYPTV-----DLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + I+ KS + G + + + ++I Sbjct: 296 FAK-MGPAILIYLAYFLAISATKSALEDGDIPAAIGMWPINAMLLIVAI 343 >gi|323966510|gb|EGB61943.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251763|gb|EGE63449.1| hypothetical protein ECSTEC7V_3615 [Escherichia coli STEC_7v] Length = 359 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGTIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRFALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + ++ IM + G L AL I + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWSSYQIMVNLGLLFALSAPVTALGLPIAFMLVALSLVYW 354 >gi|301643655|ref|ZP_07243696.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|301078039|gb|EFK92845.1| conserved hypothetical protein [Escherichia coli MS 146-1] Length = 349 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 113/351 (32%), Gaps = 2/351 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R++G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPS-SEYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 +A G+ G + + IM + G L AL I + +++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVAL 349 >gi|103487657|ref|YP_617218.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] gi|98977734|gb|ABF53885.1| permease YjgP/YjgQ [Sphingopyxis alaskensis RB2256] Length = 402 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 51/364 (14%), Positives = 128/364 (35%), Gaps = 13/364 (3%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M + + RY + + L+ + +L+ + + + + + +S + A Sbjct: 1 MNKLPAIDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGG-PVSVVWRMLANL 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +P + IP ++ ++ F L +SEL + + +G+S +L+ V ++ L + Sbjct: 60 IPEYLSLGIPIGLMLGILLAFRRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLA 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-------ISNPQQDIFIGAKKILP 171 ++ I L + + + + + + + I Sbjct: 120 IVGFIQPYARYAYEGLQFELRSGALGASIKVGEFTRLGERMTLRIEESYNEGRSLRGIFV 179 Query: 172 ENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP 231 + + + + D + I+ + L + ++ L IP Sbjct: 180 RGEQRDGQRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIP 239 Query: 232 -IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 +++ F+ + E+ + + + F+F IV + + + LI Sbjct: 240 LPRIEAFRLRGGADREMTIPELFVAGKD-RRQSEQTRLESRANFHFRIVEVMSMFLIPLI 298 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A ++++ RS + V I + I + G G + P+ A +P +L +L Sbjct: 299 AVALAVPPKRSTS-SLGVFLSIVLLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAAL 357 Query: 351 SILI 354 +I + Sbjct: 358 AIWM 361 >gi|91228859|ref|ZP_01262764.1| putative permease [Vibrio alginolyticus 12G01] gi|269966356|ref|ZP_06180442.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91187597|gb|EAS73924.1| putative permease [Vibrio alginolyticus 12G01] gi|269829033|gb|EEZ83281.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 366 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 35/349 (10%), Positives = 103/349 (29%), Gaps = 7/349 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + + +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASD-GDIPAGLIFSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLALITSAVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L +Q + + +FI K ++++ Sbjct: 121 SPWSQDRVEQLYEQVASENSVDLLKKGQFQGTPDGSSVVFIDDIKDNTLSNVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + + Sbjct: 181 DSVLPSVMFSSSGEVKELSDGRQIITMKEGTRYEGVPTRVEYMITKFDEYEGVIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + A+ + + I + + + +T++ +S R + Sbjct: 241 KKGRDWEAYPTV-----DLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + I+ KS + G + + + ++I Sbjct: 296 FAK-MGPAILIYLAYFLAISATKSALEDGDIPAAIGMWPINAMLLIVAI 343 >gi|163803712|ref|ZP_02197572.1| putative permease [Vibrio sp. AND4] gi|159172495|gb|EDP57360.1| putative permease [Vibrio sp. AND4] Length = 366 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 105/350 (30%), Gaps = 7/350 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + + + +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLAKASD-GDIPAGLIFSVVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +I+ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALCLAIITSGVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L Q + + + +FI K ++++ Sbjct: 121 SPWSQDRVEQLYDQVEAENSVDLLQKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + + Sbjct: 181 DSVLPSVMFSSSGEVKELSDGRQVITMHDGSRYEGVPTRVEYMVTKFDQYEGVIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + A+ + + I + + + +T++ +S R + Sbjct: 241 QKGRDWEAYPTL-----DLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + I + I+ KS + G + + + ++IL Sbjct: 296 FAK-MGPAILIYLAYFLAISATKSALEEGTIPAAIGMWPINAMLLIVAIL 344 >gi|224368911|ref|YP_002603073.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] gi|223691628|gb|ACN14911.1| predicted permease family protein [Desulfobacterium autotrophicum HRM2] Length = 391 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 125/367 (34%), Gaps = 13/367 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + RY F+ + + + + + EI N + N I +L A +P Sbjct: 1 MMTTINRYIFRELIPPFAISAVFLTSIFIMTRIPEITNMVVNY-NTGIFSVLLLIACTLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ IP ++ ++ F ++ +E++ + GI+I++LL P ++ +L T+ + Sbjct: 60 RFMEFTIPMSVMISVLLTFMRMSGDNEIIALKGGGITIYRLLPPVLIFCLLGTAVTLWIT 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 G L + + + Sbjct: 120 IIGVPLGNMSFKTLGIAMARSNLNVALSDGTFNSSFKDVMIYISSMDVKTKKLRDLFIED 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLK---------KVVEYQYGRIPIDKNSTTLNIP 231 T D+ + + + L+ + + D L+ Sbjct: 180 RRTKDRVTISVAPEGVLVKDAVTGSYALRLYGGSVNQVDLKSRSINNVGFDTYDINLDFA 239 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 + ++ F + E+ + S A +F+ IP+ +AM ++A Sbjct: 240 QVQKSSKVGNKDFDEMTLNELRAFLK--KTSEKPELNAALMEFHEKFSIPIACIAMGILA 297 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 ++ L+ + S++ G+F + Y ++ S G++G+ P+ +P I+ + Sbjct: 298 MALGLQAA-SSRKTAGFGLGMFFFLLYYLLLAAGWSAGENGLYPPLIGMWMPDIVMGGIG 356 Query: 352 ILILLQK 358 +L + Sbjct: 357 SFLLYRI 363 >gi|94266928|ref|ZP_01290581.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] gi|93452380|gb|EAT02999.1| permease YjgP/YjgQ [delta proteobacterium MLMS-1] Length = 359 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 124/361 (34%), Gaps = 8/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + L G + + ++D E + + ++PL Sbjct: 1 MKLLDRYLITSFGRNLATVLGGLLAIYLLVDFFERVDSFLD-AGLGTGGAVRYLLLKIPL 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II+Q++P L+ I+ LNR EL+ +A G+S +++ P ++ + + + Sbjct: 60 IIEQLLPVALLLAGIITLGLLNRRHELMALQAAGLSTRRIIRPLLLAAFACTLLGMASSQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + L Q ++ I +I Q+ + + DF+ Sbjct: 120 WLLPPTMSELNRLWHQEVRQ--QENRGIERQGRIYYRGQEGIYSFRPAADSENRLADFSY 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVV-----EYQYGRIPIDKNSTTLNIPIKMDG 236 +T D+ ++ A A K L++ + L +P + Sbjct: 178 LTWDRDYRLAQLIFATRASWDGRKWLLEEGQLKEKANGDDDFVVDYFERRQLALPEEPAD 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F + R+ + + + S + R Q + + + + I +++ Sbjct: 238 FFIPPYALSERALSTLFSQATASADTPQRRQARLAIQHKISYIFLGLPLLLIGIPLLLAM 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + F F+ + + + +S +G L P AA +L ++ Sbjct: 298 SRGRGRDLALAIPAASFLAFITWGLWSFGQSLAAAGQLPPFIAAWALHLLAAGGGWYLIK 357 Query: 357 Q 357 + Sbjct: 358 R 358 >gi|305664654|ref|YP_003860941.1| hypothetical protein FB2170_00060 [Maribacter sp. HTCC2170] gi|88707355|gb|EAQ99601.1| hypothetical protein FB2170_00060 [Maribacter sp. HTCC2170] Length = 341 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 116/338 (34%), Gaps = 4/338 (1%) Query: 20 FLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVF 79 LL + + + +L E +M + + + + I + P + I Sbjct: 1 MLLLFIPIGIMANLAEQIGKMID-NDAPTNEIIIYYVNFTIYIGSLLFPIFLFLSIIFFT 59 Query: 80 FNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWK 139 L +E+V + G+S + L P+++G+ ++ + +++ I + + ++ Sbjct: 60 SKLASNTEIVAILSSGVSYNRFLRPYLIGASIVALIMLVMAMFIVPNASIGYNEFKFKYL 119 Query: 140 DNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLA 199 G + + + Q++ + + + + I Sbjct: 120 KKGKQDRVTSNIFNQLNESDFIYVKSFDPARQNANQFTFERFNEDNTLDFKISANSIRWI 179 Query: 200 IIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI--PIKMDGFQKFSEQFASRSFYEIIKKMS 257 + K G I + L+ K+D S +++ +E+ + + Sbjct: 180 EKDSTYRLTKYKKRKMVGDSAIIETKNRLDTLFTFKIDDLTPVSYIAETKNLFELNRFIE 239 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + + Y +PL +T+IA +VS R I +A+GI F+ Sbjct: 240 NQRRKGASNINNYVLVKYRRWALPLTAFILTIIAVAVS-SVKRRGGMGINLAFGIGVAFI 298 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + P+ A +IP ++ L+ +L Sbjct: 299 YIFFDKVFGTLAEQAGFSPLLAVIIPNVVFGVLAFYLL 336 >gi|54295469|ref|YP_127884.1| hypothetical protein lpl2555 [Legionella pneumophila str. Lens] gi|53755301|emb|CAH16795.1| hypothetical protein lpl2555 [Legionella pneumophila str. Lens] Length = 359 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K T + +++ + N+ + L +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAAS-GSIPGFVIMKLLMLELPNLM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + L SE+ + RA G QLL + ++ + +V+ Sbjct: 61 GLLLPLGFYIALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVVIWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + LI+ Q + I++ QQ ++ + + Sbjct: 121 SPVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + AD A + ++ + Q G+ + ++ Sbjct: 181 VQDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPN 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + H+ + + + I IPLM++ +TL+A +S RS + Sbjct: 241 PTVVMHDDARTAKTRDLWPLNNHDLKKAAELQWRISIPLMVLTLTLVAVPLSRVSPRSGK 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + + + +G + + L IL + + Sbjct: 301 YSK-LLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHVAVAILGILFIWR 353 >gi|332753041|gb|EGJ83425.1| hypothetical protein SF434370_3220 [Shigella flexneri 4343-70] gi|332998924|gb|EGK18515.1| hypothetical protein SFVA6_3889 [Shigella flexneri VA-6] gi|333000167|gb|EGK19750.1| hypothetical protein SFK218_4002 [Shigella flexneri K-218] Length = 359 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDGVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|242279363|ref|YP_002991492.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] gi|242122257|gb|ACS79953.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] Length = 376 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 131/358 (36%), Gaps = 13/358 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 +PG L Y K + L + + DL + + E + ++P Sbjct: 6 LPGYLASYVLKQNIFLMCVCLGVGTGIYLLSDLFDRLDDFIE-AGLGMGTILKYFLVKMP 64 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 LI QI+P + L+ IV + R+ EL+ R G+S+ L FV+ +++ +L Sbjct: 65 LIFSQILPAVFLISMIVQLCVMARSKELLALRTGGLSLIWFLRFFVIYAVIWSFGQLLFS 124 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I GE+ + ++ D I + + AK+++P + +D T Sbjct: 125 QVIGVYGEQEAYRIWKEDVRK---SMLDKRVLKNIWLKEGRFVVEAKEVMPFGNRAKDIT 181 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLK-----KVVEYQYGRIPIDKNSTTLNIPIKMD 235 + N I R + + K K ++ ++ + + + + + Sbjct: 182 VYEFAEGNGGIKRVITSESAEVSSKYGWKLENAVELSPDKFASQKHPIFTMPIKLNLNVF 241 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 A +++ + + S R T ++ L+ M L++ ++ Sbjct: 242 KVVDPDIDPAQLPLWQLDQVIEQLKLSGS-SVDRLITAWHSKWAYAFSLLTMALVSLALV 300 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + G+ F Y + + S G +G L P+ AA + IL SL++ Sbjct: 301 TITE---NIYLNIGLGLAIIFTYYALFMVGASAGDTGALPPIVAAWLGNILVSSLALG 355 >gi|254786690|ref|YP_003074119.1| permease, YjgP/YjgQ family [Teredinibacter turnerae T7901] gi|237683657|gb|ACR10921.1| permease, YjgP/YjgQ family [Teredinibacter turnerae T7901] Length = 378 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 39/365 (10%), Positives = 114/365 (31%), Gaps = 16/365 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L + L ++++ + L A R+P + Sbjct: 2 IIFRYLAREVLSSMFAVSLVLLMIIISARFVNYLAEAA-AGKLDAGVLLTLMAYRLPAYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++ + L SE+ + A G+S +L+ + S+++ + L + Sbjct: 61 ELILPLGLFIGILMAYGRLYLDSEMTVLSACGLSQKRLVGYTLAASLVVAMLVGLFSLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G K L+ + ++ D + + + A+ I + Sbjct: 121 GPQGVKASEALLAEQRNRTDFETLKPSRFHTLDQGAGTS--YAESISEDKKQLRGVFMAK 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + + + Sbjct: 179 VSPIDPADDLDKVTHQEADLTVLTAESGETVIDPQSGQKYLLLKNGRRYVGTPGTQNYQV 238 Query: 244 FASRSFYEIIKKMSFSNKSNIF------------HNYRAETQFYFLIVIPLMLVAMTLIA 291 +F +++ + ++ K F A + +P++++ + L+A Sbjct: 239 VEFGNFSQLLPEPDYAVKPKRFTDGLTTFKLLQAKTREASAALQWRFSMPVLVMIVGLLA 298 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 +S R + ++ I + + + + G + +L +++ Sbjct: 299 VPLSKTQPRQGRYAKMLP-AIILYMVYLVCVNAARGLIEKGNEPVPGMLWLVHLLFFTVA 357 Query: 352 ILILL 356 + +L+ Sbjct: 358 LFLLV 362 >gi|297569343|ref|YP_003690687.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925258|gb|ADH86068.1| permease YjgP/YjgQ family protein [Desulfurivibrio alkaliphilus AHT2] Length = 398 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 120/347 (34%), Gaps = 7/347 (2%) Query: 12 YYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFIT 71 L LL ++F+ L + +++ L + A + P ++ +P Sbjct: 15 EMLAPFFAALLVINAILFLGRLIPLLDEIFAL-GLGLGDFARICLYMSPRLLLFSLPMAC 73 Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT----SG 127 ++ I+ F +N E++ +A GI ++++L P ++ + + T++ + + Sbjct: 74 MMGVIIAFTRMNGDYEIMALKASGIGLYRMLPPVLLLGAVTALLTLVTATVLIPKSTIAT 133 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 ++ L + + G + + Q+ +++ D Sbjct: 134 NQLFWHLAKTKVEQGVRPNTFSEGLPQVVLYVEEVTPDNAWRGVYLSDLRDPDHPVTVMA 193 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + D + I Q I L IP+ Sbjct: 194 PDGQLQADTAGSRIMLTLHDGTMHRAVQEKTQTIHFGRYHLEIPLTPPAAFADRTGRHGM 253 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + E+ + + + + +++ +V+P + ++ +++L SR+ + Sbjct: 254 TQDELRQTAAKLGPEHSRYKT-YLIEYHQRLVLPAGAFILAMLGITLTL-LSRTPHQALG 311 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V G+ S Y ++T K+ + G L A +P ++ ++ + Sbjct: 312 VPLGLLSFIAYYVLLTAAKTLAEGGQLPLGPAMWLPNLVFAIFTVYL 358 >gi|24114287|ref|NP_708797.1| hypothetical protein SF3026 [Shigella flexneri 2a str. 301] gi|30064334|ref|NP_838505.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|24053443|gb|AAN44504.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042591|gb|AAP18315.1| hypothetical protein S3227 [Shigella flexneri 2a str. 2457T] gi|281602370|gb|ADA75354.1| putative permease, YjgP/YjgQ family [Shigella flexneri 2002017] gi|313648097|gb|EFS12543.1| hypothetical protein SF2457T_3697 [Shigella flexneri 2a str. 2457T] gi|332752655|gb|EGJ83040.1| hypothetical protein SFK671_3613 [Shigella flexneri K-671] gi|332754439|gb|EGJ84805.1| hypothetical protein SF274771_3586 [Shigella flexneri 2747-71] gi|332765461|gb|EGJ95679.1| hypothetical protein SF293071_3543 [Shigella flexneri 2930-71] gi|333014735|gb|EGK34080.1| hypothetical protein SFK304_3819 [Shigella flexneri K-304] Length = 359 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDGVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYHLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|149186433|ref|ZP_01864746.1| predicted permease [Erythrobacter sp. SD-21] gi|148830022|gb|EDL48460.1| predicted permease [Erythrobacter sp. SD-21] Length = 409 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 125/360 (34%), Gaps = 9/360 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + + + + A L+ + + + + + + + AT +P Sbjct: 8 IDRYIARLVIVPMVGVFVLAASLLVLDKMLRLLDFVAVEGG-PVGVVFKMLATLLPEYAS 66 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IP L+ ++ F L TSEL + RA+G+S +LL + + +L V ++ I Sbjct: 67 LAIPLGLLLGILLAFRKLATTSELDVFRAVGMSYGRLLRVPFLITGVLMTLNVALVFFIQ 126 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L + + + + +++ ++ + + Sbjct: 127 PVSRFTYERLEYELRSGALGASIKVGEFTTLADRMALRIEESEDDGRQLKGIFARVANDK 186 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-----MDGFQK 239 + I ++ LA + + ++ E + + L + ++ Sbjct: 187 GQVLSISAKEGNFLATTDDPDTIILRLTEGTIVQDTGSQTPRVLTFTRHDLPIDLPAIEE 246 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRA--ETQFYFLIVIPLMLVAMTLIAASVSLE 297 F + Y + + + N + R + F F +V +M+ M L+A ++ + Sbjct: 247 FRARGEDEREYILPELLRIGWADNQTESKRDASQASFNFRLVEVVMMALMPLLAVALGIP 306 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + V I + + + G+ P+ A +P L +L + + + Sbjct: 307 PKRSTS-ALGVFLSIIMVVAYHKVNQYGEDLAAIGMFDPILALWVPFFLFAALILWMYYR 365 >gi|260891450|ref|ZP_05902713.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] gi|260858833|gb|EEX73333.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] Length = 358 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 121/361 (33%), Gaps = 6/361 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L +Y Y+K+ + ++ ++ + + + + + P Sbjct: 1 MNK-LDKYIILNYVKSFILGMMMFFLIFLLAESISLTGWIMD-GKLKGHDAIRYLRYGTP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II P L+ +++ + + E+ + GIS ++ ++ S L+ + + Sbjct: 59 EIITNTAPLGVLLGSLLCISKMAKQLEIAAMKTSGISFARIALFPMIFSFLVSMGVFWLN 118 Query: 121 NPIATSGEKIGIDLIQ-QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +L + + + +++I K E Sbjct: 119 YDALGKSNTKKENLKSLKIDNKEPVKSEKKFIFVKIDKKTVLFSEHVNKNTGTMEHIEIL 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-KNSTTLNIPIKMDGFQ 238 K+ I+ ++ K + EY + ++ KM+ Sbjct: 179 KFEKGFKEISKIYTSPFGKINPKTNEWTFKDLKEYDDKTNLMKPADTKKFKFIAKMEDVL 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ +K+ + + +FY+ I L M LI S+ + Sbjct: 239 ASPVKAKNLTMPELREKVVYFTRVGADSLNL-RIEFYYRISFALSSFVMCLIGLSLGSRY 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + G+ Y + TI++S SG + AA IP+I+ + + I + Sbjct: 298 VR-GGAALNIGLSVIIGYAYYGVSTILRSMAVSGAVPIYAACFIPLIIFLIVGIKLFRDS 356 Query: 359 E 359 E Sbjct: 357 E 357 >gi|104783411|ref|YP_609909.1| hypothetical protein PSEEN4442 [Pseudomonas entomophila L48] gi|95112398|emb|CAK17125.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 371 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 115/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLFMIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLAMTLAPAALVALLVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G +I Q + + + + + + + Sbjct: 121 APLGVAQVQKIIAQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLAGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + ++ N + L+ Y D + + + Sbjct: 181 FNQDKTKDRAPSVLVAEKGHQEVQADGNRYLVLQNGYRYDGNPGQADYRAIKYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E+ R R + + + +PL++ +TL+A +S Sbjct: 241 PKPEVAEEVTEREAIPTSDLFGN-------PGVRERAELQWRLSLPLLVFVVTLLAVPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I T++ ++ + G L L + + + ++ Sbjct: 294 RVNPRQGR-FLKLLPAILLYMAYLTMLISVRGALEKGKLPISLGIWWVHGLFLLIGLALM 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|37681090|ref|NP_935699.1| permease [Vibrio vulnificus YJ016] gi|37199840|dbj|BAC95670.1| predicted permease [Vibrio vulnificus YJ016] Length = 366 Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 38/349 (10%), Positives = 104/349 (29%), Gaps = 7/349 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + S + A +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASD-GDIPASLIMSIVALNMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L +Q + + +FI K ++++ Sbjct: 121 SPWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + S + Sbjct: 181 DSILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + A+ + + + + + + +T++ +S R + Sbjct: 241 QRGRD----WDAIPTLELIGNPD-PEAQAELQWRVSLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + I+ KS + G + L + ++I Sbjct: 296 FAK-MGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAI 343 >gi|310822423|ref|YP_003954781.1| hypothetical protein STAUR_5182 [Stigmatella aurantiaca DW4/3-1] gi|309395495|gb|ADO72954.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 373 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 122/364 (33%), Gaps = 11/364 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G L+RY + Y + + L + + V+D + L + Sbjct: 1 MRGTLFRYVARLYARFAVGILAALLTVFLVVDFVDRSRAYTGEGWV--LAVLELYWNKAL 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + Q + P L+ L + E+ RA+ L P ++ + + Sbjct: 59 VTTQLLGPAALLLAAGAAVSTLRKRGEVTALRALTFGPASLYLPVGAVALAACLGLIAFD 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + ++ Q + + P + F+ + + D Sbjct: 119 ERVVAQASRRVDEITTQRFNRWGDWRLYYTPKQWFRRGEHVFFLRSGSAQEG---FRDVA 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVK-LKKVVEYQYGRIPIDK----NSTTLNIPIKMD 235 +T+ K+ R DAD + L VVE + ++ + Sbjct: 176 ILTLTADFKLARRLDADTMVPLEGNRWRLTGVVERSFSPDGRTAVSAAPEAEYDLGVPAR 235 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 F + E+ +++S + + + E Y P+ + L+A ++ Sbjct: 236 SFLIRPGRPEQMRLPELREQISARTEVG-LDSRQYELALYNRFAYPMAGLPAALVAVGLA 294 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L +R + + G+ ++ +I + K+ + + P AA +P + + ++ ++ Sbjct: 295 LRPNRKGHLTVAIVEGLLIAMAMWGLIVVSKTLVTTERMAPGLAAWLPSGVLVVVATVLW 354 Query: 356 LQKE 359 L++E Sbjct: 355 LRRE 358 >gi|148358635|ref|YP_001249842.1| permease [Legionella pneumophila str. Corby] gi|296108275|ref|YP_003619976.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] gi|148280408|gb|ABQ54496.1| permease [Legionella pneumophila str. Corby] gi|295650177|gb|ADG26024.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] Length = 359 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K T + +++ + N+ + L +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAAS-GSIPGFVIMKLLMLELPNLM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P V ++ + L SE+ + RA G QLL + ++ + +V+ Sbjct: 61 GLLLPLGFYVALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVMIWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + LI+ Q + I++ QQ ++ + + Sbjct: 121 SPVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + AD A + ++ + Q G+ + ++ Sbjct: 181 VQDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPN 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + H+ + + + I IPLM++ +TL+A +S RS + Sbjct: 241 PTVVMNDDARTAKTRDLWPLNNHDLKKAAELQWRISIPLMVLTLTLVAVPLSRVSPRSGK 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + + + +G + + L IL + + Sbjct: 301 YSK-LLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHVAVAILGILFIWR 353 >gi|149371725|ref|ZP_01891141.1| hypothetical protein SCB49_09980 [unidentified eubacterium SCB49] gi|149355352|gb|EDM43912.1| hypothetical protein SCB49_09980 [unidentified eubacterium SCB49] Length = 338 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 107/335 (31%), Gaps = 2/335 (0%) Query: 21 LLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFF 80 +L + + + L E +++ + + A+ + P + I Sbjct: 1 MLLFIPIGITVHLAEKIDKILD-NEVPFNAVAIYFLEFTVYFANLLFPLFLFLSVIWFTS 59 Query: 81 NLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKD 140 L +E++ + G+S ++ L PF++G+ ++ + + + +A + ++ Sbjct: 60 KLANNTEVIAFLSSGVSYYRFLRPFMIGATIIFVLGLGLTLYLAPLASTGYNEFTYKYLV 119 Query: 141 NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAI 200 + I N + +H + +R + Sbjct: 120 RKKDRDKGNIFRQINDNDYIYVSYFNTLDNSGSHFTLEHFEEEKLVYKISANRIRYNEKD 179 Query: 201 IYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN 260 KK I + S K++ + ++ ++ + Sbjct: 180 STYTLQSYKKRTIGVNDDILESRASLDTTFSFKLEDLTPVKYIAETLNYSKLNSYIEQEK 239 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 + + R + Y IP + +T+IA SVS R +A GI G + Sbjct: 240 ERGSSYINRYVLEKYKRFSIPFSVFILTIIAVSVS-SVKRRGGMGANLAIGIGIGMIFVF 298 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I + + P+ A P ++ L+I +L Sbjct: 299 FDKIFGTLAQQSDFSPLVATWFPNVIFAILAIYLL 333 >gi|324005416|gb|EGB74635.1| hypothetical protein HMPREF9532_04926 [Escherichia coli MS 57-2] Length = 359 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 113/356 (31%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A+ ++ + + G+ + + + Sbjct: 120 WGASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + + + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQDTGQPSS-EYHLALWEKLGQPILTLAMILLAVPFTFSVPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|71064627|ref|YP_263354.1| hypothetical protein Psyc_0046 [Psychrobacter arcticus 273-4] gi|71037612|gb|AAZ17920.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 402 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 128/385 (33%), Gaps = 34/385 (8%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 +L RY L + ++G L V + + + +Y++ R P Sbjct: 22 KVLSRYVKLNALLAIIAAVIGLWALQLVFSYLSELDSLDD--SYTMGEAIKYIFYRSPYF 79 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 ++Q IP L+ ++ L SELV+ RA GIS++++++ + +++ + +++ Sbjct: 80 LEQFIPTGALLGAVIGLGLLANNSELVVMRAAGISVYRIVSWVLQPALIFVVLALIINQF 139 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD---------IFIGAKKILPEN 173 + ++ ++ K N S W + I Sbjct: 140 VLPHSNQLANEI--NSKGNSSLVTSVRGYWTVQPRFENTKRGTTKPDGSDILYIDYADVK 197 Query: 174 HIWEDFTSITIDKKNKIIHRKD--------------------ADLAIIYNDKVKLKKVVE 213 +D + + K ++ Sbjct: 198 GNIGQVKRWHLDNNGSLQTAIHAEGGQYIGREPLDTVSSKPSEQYRYEWQLNNMTKLMIN 257 Query: 214 YQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ 273 + + TL++P + + Q S ++ + F + E Sbjct: 258 QGFESSQAISPTDTLSLPFAPESVYLLTHQAEDLSLTQLYEHRQFMRQQGQRSLS-HELA 316 Query: 274 FYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 F+ ++ PL ++++ ++A S R++ + + + G + + ++ + Sbjct: 317 FWQKLLSPLSILSLVIVACSFVFGSLRTHSLGLRIVVALLFGLLFSYVQDLVGFVSLATG 376 Query: 334 LLPVAAALIPVILTISLSILILLQK 358 P+ L+P+I + L +L ++ Sbjct: 377 FSPLLMVLLPIIASALLGEYLLKRQ 401 >gi|254242519|ref|ZP_04935841.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195897|gb|EAZ59960.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 372 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 114/356 (32%), Gaps = 6/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ A R+P + Sbjct: 2 IVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQ-GLLDPGSLFLIMAFRIPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + ++L+ I + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G L+ + + + + +++ + Sbjct: 121 APQGINQFALLLNKQDTLTEFDTLVPGRF--QAMRDGTRVTYTEELSKDRGELAGIFISQ 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + R + L + Y + + + + Sbjct: 179 KDLNSSNQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVM 238 Query: 244 FASRSFYEIIKKMSFSNKSNIF--HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + +++F N R + + + + PL++ +TL+A +S R Sbjct: 239 LPKPEASSEVSERDAVPTADLFGSDNPRYQAELQWRLSTPLLVFVVTLLAVPLSRVNPRQ 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + I ++ ++ G + L +++ +L+ Sbjct: 299 GR-FLKLLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLFYW 353 >gi|15599023|ref|NP_252517.1| hypothetical protein PA3828 [Pseudomonas aeruginosa PAO1] gi|116051856|ref|YP_789301.1| hypothetical protein PA14_14500 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889888|ref|YP_002438752.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254236732|ref|ZP_04930055.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296387656|ref|ZP_06877131.1| putative permease [Pseudomonas aeruginosa PAb1] gi|313109247|ref|ZP_07795215.1| hypothetical protein PA39016_001710056 [Pseudomonas aeruginosa 39016] gi|9950003|gb|AAG07215.1|AE004800_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587077|gb|ABJ13092.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126168663|gb|EAZ54174.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|218770111|emb|CAW25873.1| putative permease [Pseudomonas aeruginosa LESB58] gi|310881717|gb|EFQ40311.1| hypothetical protein PA39016_001710056 [Pseudomonas aeruginosa 39016] Length = 372 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 114/356 (32%), Gaps = 6/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ A R+P + Sbjct: 2 IVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQ-GLLDPGSLFLIMAFRIPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + ++L+ I + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G L+ + + + + +++ + Sbjct: 121 APQGINQFALLLNKQDTLTEFDTLVPGRF--QAMRDGTRVTYTEELSKDRGELAGIFISQ 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + R + L + Y + + + + Sbjct: 179 KDLNSSNQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVM 238 Query: 244 FASRSFYEIIKKMSFSNKSNIF--HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + +++F N R + + + + PL++ +TL+A +S R Sbjct: 239 LPKPEASSEVSERDAVPTADLFGSDNPRYQAELQWRLSTPLLVFVVTLLAVPLSRVNPRQ 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + I ++ ++ G + L +++ +L+ Sbjct: 299 GR-FLKLLPAILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLFYW 353 >gi|307611507|emb|CBX01181.1| hypothetical protein LPW_28801 [Legionella pneumophila 130b] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 113/354 (31%), Gaps = 2/354 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K T + +++ + N+ + L +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAAS-GSIPGFVIMKLLMLELPNLM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + L SE+ + RA G QLL + ++ + +V+ Sbjct: 61 GLLLPLGFYIALLLAYGRLYAESEMTVLRACGYGPRQLLKHSFAMATVVLVVVAIVMIWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + LI+ Q + I++ QQ ++ + + Sbjct: 121 SPVIAVERTKLIRSTGIKTLIQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + AD A + ++ + Q G+ + ++ Sbjct: 181 VQDNKLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPN 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + H+ + + + I IPLM++ +TL+A +S RS + Sbjct: 241 PTVVMHDDARTAKTRDLWPLNNHDLKKAAELQWRISIPLMVLTLTLVAVPLSRVSPRSGK 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + + + +G + + L IL + + Sbjct: 301 YSK-LLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHVAVAILGILFIWR 353 >gi|307824319|ref|ZP_07654545.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] gi|307734699|gb|EFO05550.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] Length = 357 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 137/359 (38%), Gaps = 8/359 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + LK +L L + L + ++ +G+ +Y ++ A P Sbjct: 1 MNVLTGYIVREILKGSLVATLLLLTLFNLFTFSDQLKDLGK-GHYGLTEIFYYLALTSPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +++P L+ ++ + + EL+ RA G+SI ++ ++ ++L + ++LV Sbjct: 60 VFYELMPASALLGSLFILGAMGNNRELIAMRAAGLSILGIIRAVMLAGLILVVVSILVGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A E+ + D G + + + FI +K+ + ++ + Sbjct: 120 FVAPVAERAAQMIKVNAVDEGRVVMNVK---YGLWLREGKKFINVRKMQDDGNLADISIY 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI---DKNSTTLNIPIKMDGFQ 238 D++ N + KL+ + + + ++N + D Sbjct: 177 ELDDQRRLRYSIHAEKAVFQGNQQWKLEGIKQSGISIDQMTASNQNEQIWQSTVAPDLLD 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S Y++ + F ++ + E F+ +V PL+++ M L++A + Sbjct: 237 IVVVNAHDLSMYDLAMYVDFLKDNHQKSH-EFELAFWGRVVNPLVVLVMLLVSAPFVIGV 295 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + G+ G I I+ G L P A+ P + ++L++ L + Sbjct: 296 KRGINVGGRMMIGVVIGMGFNIIDKIVGHLGLIYDLNPPLMAVTPSLTVLALALFALSR 354 >gi|301017326|ref|ZP_07182090.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300400299|gb|EFJ83837.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + + ++ ++ S Sbjct: 180 DDLSLESYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPSS-EYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVMMALSLVYW 354 >gi|117625285|ref|YP_854457.1| putative permease [Escherichia coli APEC O1] gi|115514409|gb|ABJ02484.1| putative permease [Escherichia coli APEC O1] gi|294491111|gb|ADE89867.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625417|gb|ADN69721.1| hypothetical protein UM146_01460 [Escherichia coli UM146] gi|315288788|gb|EFU48186.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951498|gb|EGB47373.1| YjgP/YjgQ permease [Escherichia coli H252] gi|323957870|gb|EGB53584.1| YjgP/YjgQ permease [Escherichia coli H263] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 2/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + + + + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQDTGQPSS-EYHLALWEKLGQPILTLAMILLAVPFTFSVPRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 299 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 354 >gi|156975868|ref|YP_001446775.1| hypothetical protein VIBHAR_03634 [Vibrio harveyi ATCC BAA-1116] gi|156527462|gb|ABU72548.1| hypothetical protein VIBHAR_03634 [Vibrio harveyi ATCC BAA-1116] Length = 366 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 104/350 (29%), Gaps = 7/350 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + + + +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLAKASD-GDIPAGLIFSVVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +I+ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALCLAIITSGVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L Q + + + +FI K ++++ Sbjct: 121 SPWSQDRVEQLYDQVEAENSVDLLQKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + + Sbjct: 181 DSILPSVMFSSSGEVKELADGRQIITMHEGTRYEGVPTRVEYMVTKFDQYEGVIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + A+ + + I + + + +T++ +S R + Sbjct: 241 QKGRDWEAYPTL-----DLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + I + I+ KS + G + + ++IL Sbjct: 296 FAK-MGPAILIYLAYFLAISATKSALEEGTFPAAIGMWPINAMLLIVAIL 344 >gi|153834578|ref|ZP_01987245.1| inner membrane protein YjgP [Vibrio harveyi HY01] gi|148869021|gb|EDL68066.1| inner membrane protein YjgP [Vibrio harveyi HY01] Length = 366 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 104/350 (29%), Gaps = 7/350 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + + +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFISVLADASD-GDIPAGLIFSVVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +I+ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVQAALYLAIITSGVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L +Q + + +FI K ++++ Sbjct: 121 SPWSQDRVEQLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + + Sbjct: 181 DSILPSVMFSSSGEVKELSDGRQIITMHEGTRYEGVPTRVEYMITKFDQYEGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + A+ + + I + + + +T++ +S R + Sbjct: 241 QKGRDWEAYPT-----ADLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + I + I+ KS + G + + + ++IL Sbjct: 296 FAK-MGPAILIYLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAIL 344 >gi|90411866|ref|ZP_01219874.1| putative permease [Photobacterium profundum 3TCK] gi|90327124|gb|EAS43496.1| putative permease [Photobacterium profundum 3TCK] Length = 366 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 112/355 (31%), Gaps = 13/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L ++ I + + L +P + Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFIRILADATD-GSIPGDLILTLMGLYMPSMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ ++ +++ G + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIQAALLLAMITGSVAAFNSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKIL----PENHIWEDF 179 A + ++++ + + + + + +F+ + + + Sbjct: 121 APWSSEQETQVMERVESDVGLDLLVKGQFQPAPDGKGVVFVNDITDKGSKLEKVFVAQIV 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T+ + R + LK Y+ +D + T + G + Sbjct: 181 ARDTMRPSVMVAERGYVSELDDGRQILDLKDGTRYEGVPTRLDYSITEFEDYQALIGQRA 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 E+ M S + F + + + L + +T++ +S Sbjct: 241 IREKNRDWDALPTPTLMQHSELAARAE-------FQWRVSMFLCIPLLTMVVVPLSSVNP 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + I+ KS + G L ++ ++I + Sbjct: 294 RQGRFAK-LFPAVLIYLVYFLAISAAKSAVEDGSLPSYIGLWSINVVMFVVAIAL 347 >gi|218885479|ref|YP_002434800.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756433|gb|ACL07332.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 361 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 122/355 (34%), Gaps = 6/355 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY F+ L L L L + DL + + E S+S A + PL Sbjct: 1 MSLLARYLFRNNLMLILPTLAIGTGLYILSDLFDRLDDFLE-AGVSLSVAAWYFVAKTPL 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II QI+P + L+ + ++R EL+ +A GIS+ ++ V+ ++ G + Sbjct: 60 IISQILPAVFLLATLSQLCLMSRGRELIALQAGGISMGRIARVLVLCGLVWGGLQLGFSQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSD-IIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + SGE + + + + W + + Sbjct: 120 VLGVSGEVEAARIWSEDVRGKTEATATLRNVWFTDGAYVVSLAEVVPAQGTGRGLAAYEL 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S +++ + + + Y D + L ++ Sbjct: 180 SDDGLSILRVVRAATFTAGQRQWELHGVTEFDPSGYLSTRHDSLTLPLRQDVQAFLITAR 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + +++ + + S L ++V + AA V+ Sbjct: 240 NADPSRLPLWQLGDAIDRLSASGSNVEGVRTAWHMKLAYAASLVVMAAVAAAIVTWR--- 296 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + + F+ YT+ T+ + G+ GI+ P AA L +++++L L Sbjct: 297 -DNIYLGIGLSLIITFLFYTMFTVGGTLGQKGIVSPPLAAWGSNALILAVALLRL 350 >gi|320155252|ref|YP_004187631.1| putative permease [Vibrio vulnificus MO6-24/O] gi|319930564|gb|ADV85428.1| predicted permease [Vibrio vulnificus MO6-24/O] Length = 366 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 38/349 (10%), Positives = 104/349 (29%), Gaps = 7/349 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + S + A +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASD-GDIPASLIMSIVALNMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L +Q + + +FI K ++++ Sbjct: 121 SPWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + S + Sbjct: 181 DSILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + A+ + + + + + + +T++ +S R + Sbjct: 241 QRGRD----WDAIPTLELIGNPD-PEAQAELQWRVSLFVCIPLLTMLVIPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + I+ KS + G + L + ++I Sbjct: 296 FAK-MGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAI 343 >gi|124025509|ref|YP_001014625.1| putative permease [Prochlorococcus marinus str. NATL1A] gi|123960577|gb|ABM75360.1| possible permease [Prochlorococcus marinus str. NATL1A] Length = 395 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 105/367 (28%), Gaps = 15/367 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R+ L + + ++ + + + S + ++P I Sbjct: 24 LLDRWILFELLPPLFFSIAAFTVVSLSVGVIFDLIRKIVEIGLPFSVAIQILLLKLPSFI 83 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ + +LN SE+ ++IGIS+++++ P ++ SI + T + N I Sbjct: 84 VISFPMAMLLSTLLAYGSLNDNSEIKALKSIGISVYRIILPGLILSIAMSYMTFIFNNNI 143 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI----------SNPQQDIFIGAKKILPEN 173 + K ++ + + + Sbjct: 144 VPNTNKNAEIILANSLGRSFANEQGEDIIFSKKGEILDPYSSYKKNGVTHLFYAWKFIDG 203 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLN 229 + + + + + + + + S Sbjct: 204 QMLDVTVIDFSKLGFTQMLKAKKGIWNSDKNNWEFFEGDILTLSPDGSNTRTKFLSFLYP 263 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI-FHNYRAETQFYFLIVIPLMLVAMT 288 + ++ + + + E M S R + + +P+ Sbjct: 264 LGTELTNIAQLPKDSNDMNLGEANTAMKLYQSSGNIKEARRMKVRIQEKFTLPIACSVFA 323 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 LI S + I + Y + S G GI+ P AA PV L++ Sbjct: 324 LIGCSFGVMQKSGGGRSQSFGLSIILILIYYILSFSFSSLGVKGIINPFFAAWSPVFLSM 383 Query: 349 SLSILIL 355 +L Sbjct: 384 LGGGFLL 390 >gi|262038164|ref|ZP_06011561.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] gi|261747812|gb|EEY35254.1| permease, YjgP/YjgQ family [Leptotrichia goodfellowii F0264] Length = 358 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 122/361 (33%), Gaps = 6/361 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L +Y Y+K+ ++ ++ + + + + + +++ + +P Sbjct: 1 MNK-LDKYIILNYIKSFFLGMMMFFLIFILAESINLTGWIMD-GKFTLGEAVKYLSYGIP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ +++ + + E+ + GIS ++ ++ S + + + V Sbjct: 59 EIVTNTAPLGILLGSLLAISKMAKQLEITAMKTGGISFLRIAKFPLIFSFFVSLSVLYVN 118 Query: 121 NPIATSGE-KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 I K + + + + ++I + K E Sbjct: 119 VDILGKSNSKKSNMKLLKLEQAEPVKVEKNFILVKIDKNRILYSGYVNKKDGIMREVEII 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-KNSTTLNIPIKMDGFQ 238 K K ++ D + E+ + + I +D Sbjct: 179 EMADEFKNVKTVYTASEGALEKGTDNWTFTNLKEHNIMTNVSKNIDPGVFKLKIPIDDIL 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + E+ +K+ + + + FY+ I L M I S+ + Sbjct: 239 ADPVKAKNLTMPELREKIVYFTRVGA-DSIDLLIDFYYRISFALASFVMCFIGLSLGSRY 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + G+ Y TIMKS +G + A +P+++ + + I + ++ Sbjct: 298 VR-GGAAVNIGLSVIIGYSYYGFSTIMKSLASTGTIPVYIACFLPLLIYLGVGIKLFMEA 356 Query: 359 E 359 E Sbjct: 357 E 357 >gi|154248856|ref|YP_001409681.1| permease YjgP/YjgQ family protein [Fervidobacterium nodosum Rt17-B1] gi|154152792|gb|ABS60024.1| permease YjgP/YjgQ family protein [Fervidobacterium nodosum Rt17-B1] Length = 1111 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 118/357 (33%), Gaps = 6/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY K LK L G + + ++ + I + + +P Sbjct: 1 MKTLTRYVLKQALKPFFMGLAGFI-VFVSVEWLYQISDYIIRNRVGIDKLLLFVMYNIPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IP L V ++ E+ G+S L+ PF++ +++LG F+ L+ + Sbjct: 60 FTFLGIPVGVLFSIFWVISDMYNNREITALLVHGVSAKHLVTPFIILALILGFFSWLLGD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW--MQISNPQQDIFIGAKKILPENHIWEDF 179 + + ++ Q+ + ++ K + + Sbjct: 120 YVVPTANYKSSQILNQYIFQSPESVVKTNMLVELEKDVYFYVKEHNKAKGELYDVVLFRN 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 K D + + + + ++ + ++ + L++ +++ + Sbjct: 180 EEGNEQILTAKKVIKRKDGWFLLDGSMYIVELK-TGFLKLDMQFKEMKLDVAGEIEEMLR 238 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + ++ E+ +++ K I + + L + + LI VSL F Sbjct: 239 AYKTTRDKTSKELREQLQTYKKLGI-NASNLIVELNQRYANALGALVIVLIGLPVSLLFG 297 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ + + + GK G++ P+ A +P I+ + ++ + Sbjct: 298 FISR-SWSIILTFLIIVLYQGSGAWLSGMGKEGLMDPMLATWLPNIVFSVVGFIMYI 353 >gi|312884631|ref|ZP_07744334.1| permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309367723|gb|EFP95272.1| permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 367 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 114/351 (32%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ L + + + S A A +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFILFLVFLSQKLIRVLADATD-GDIPASLVANYVALSMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +I+ G+ Sbjct: 61 LIMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIKAALYLAIITGLLAAANAFFF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + + L ++ + + + + +FI +++ Sbjct: 121 APYSQNQLVHLQEEAAAENNVELLQKGHFQPSPDGSSVVFIDDIDKKKLQNVFVAQLRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + ++ +Y IP + N + + Sbjct: 181 DSILPSVSFSQYGEVKELSDGRQVIRMYDGTRYEGIPTRLDYMVTNFDQYEGLIGQREIK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R I F + A+ + + I + L + +T++ +S R + Sbjct: 241 SKGRGLDAIPTLNLFGDHR-----PAAQAELQWRISLVLCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + I + I+ MKS +SG + V L + +I I Sbjct: 296 FAK-MGPAILIFLAYFLAISAMKSAIESGSVSAVIGMWPINGLLLITAIAI 345 >gi|325285312|ref|YP_004261102.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] gi|324320766|gb|ADY28231.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] Length = 341 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 110/338 (32%), Gaps = 4/338 (1%) Query: 20 FLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVF 79 LL + + ++DL E +M + I + P + I Sbjct: 1 MLLLFVPIGVMLDLAEKIAKMV-RNEAPTLEILEYYMNFIIYIGSLLFPIFLFLSIIFFT 59 Query: 80 FNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWK 139 L +E+V + G+S + L P+ +G+ ++ I ++ I + I ++ Sbjct: 60 SKLASNTEIVAILSSGVSFGRFLRPYFMGATIIAILMFVMAMFIVPKASLDYHEFIFKYL 119 Query: 140 DNGDKQKSDIIPWMQISNPQQDIF--IGAKKILPENHIWEDFTSITIDKKNKIIHRKDAD 197 G K + + Q++ + + L N + E F + Sbjct: 120 KKGKKFQETTNIYNQLNENEFLYISSFDPNRQLGSNFVLEHFDNDDKLAYKLTASSIRWI 179 Query: 198 LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + K+ K+D S +++ +E+ K + Sbjct: 180 PKDTIYRLTGFTSRTVKGNVEVIEKKSRLDTIFDFKIDDLTPVSYVAETKNIFELNKFIE 239 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 K + Y +P+ +TLIA SVS R + +A+GI F+ Sbjct: 240 DQRKKGASNINTYVMAKYKRWALPVSAFILTLIAVSVS-SIKRRGGMGLNLAFGIVIAFV 298 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + L P+ A +IP + + + +L Sbjct: 299 YIFFDRVFAILAEKAGLSPLIAIIIPNAIFAIIGLYLL 336 >gi|93004885|ref|YP_579322.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] gi|92392563|gb|ABE73838.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] Length = 408 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 127/385 (32%), Gaps = 34/385 (8%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 +L RY L + ++G L V + + +Y++ R P Sbjct: 28 KVLSRYVKLNALLAIIAAVIGLWALQLVFSYLSELDSL--DGSYTMGEAIRYIFYRSPYF 85 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 ++Q IP L+ +V L SELV+ RA GIS++++++ + +++ + + + Sbjct: 86 LEQFIPTGALLGAVVGLGLLANNSELVVMRAAGISVYRIVSWVLQPAMIFVVLALFINQF 145 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD---------IFIGAKKILPEN 173 + ++ ++ + DN S W + I Sbjct: 146 VLPYSNQLANEINSE--DNSSLVTSVRGYWTVQPRFENTKDGSAKPDGSDILYIDYADVK 203 Query: 174 HIWEDFTSITIDKKNKIIHRKD--------------------ADLAIIYNDKVKLKKVVE 213 +D + + K ++ Sbjct: 204 GNIGQVKRWHLDNNGNLQTAIHAEGGKYIGREALVTASSKPSEQYRYEWQLNNMTKLMIN 263 Query: 214 YQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ 273 + + TL++P + + Q S ++ + F + E Sbjct: 264 QGFESSQAISPTDTLSLPFAPESVYLLTRQAEDLSLTQLYEHRQFMRQQGTRSLS-HELA 322 Query: 274 FYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 F+ ++ PL ++++ ++A S R++ + + + G + + ++ + Sbjct: 323 FWQKLLSPLSILSLVIVACSFVFGSLRTHSLGLRIVVALLFGLLFSYVQDLVGFVSLATG 382 Query: 334 LLPVAAALIPVILTISLSILILLQK 358 P+ ++P+I + L +L ++ Sbjct: 383 FSPLMMVILPIIASALLGGYLLKRQ 407 >gi|223938399|ref|ZP_03630293.1| permease YjgP/YjgQ family protein [bacterium Ellin514] gi|223892968|gb|EEF59435.1| permease YjgP/YjgQ family protein [bacterium Ellin514] Length = 383 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 46/383 (12%), Positives = 111/383 (28%), Gaps = 24/383 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + L T + + ++ + + + + ++ +P Sbjct: 1 MKILHTYLIRQVLATLMMTVAVFTFVLLLGNGLKEILVLIINRQATLGGVIQAFGLLIPF 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L ++VF + EL ++ G+S+ L+ P + S++L + + Sbjct: 61 VLVFALPMGMLTAALLVFGRFSADQELTAVKSSGVSLLSLITPILGLSLVLCGVSAAINM 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI----------------- 164 IA +DL + +++ Sbjct: 121 EIAPRCRIAYLDLRDEMVGKVAGAALPDSIFVKDFPGFLIYVGASDGKNLTDIHICQLDE 180 Query: 165 --GAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID 222 K + + + D + + + + + Sbjct: 181 NDKVKTMTDAPKGLLQRSGNQTSLELFDARIFDVQSGSWAYPGIVSQDLSSIKTNSTSKN 240 Query: 223 KNSTTLNIPIKMDGFQKFSEQFASR----SFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 + + + Q +FA S E+ ++ Q + + Sbjct: 241 IHIGDMTFRQLQNELQVVENEFAVPEKAGSKAELQQRRDILANKKKDVTMPIRVQMHRQV 300 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 TLI + ++ R + +A + + Y+ I + +SF L P Sbjct: 301 AFSFACFGFTLIGIPLGIQAHRRETN-VGIAMSLALVLVYYSFIILGQSFEGRPYLAPHL 359 Query: 339 AALIPVILTISLSILILLQKEDG 361 IP L ++ ++L + G Sbjct: 360 ILWIPNFLFQAIGAVMLWRANRG 382 >gi|54307698|ref|YP_128718.1| putative permease [Photobacterium profundum SS9] gi|46912121|emb|CAG18916.1| putative permease [Photobacterium profundum SS9] Length = 366 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 110/355 (30%), Gaps = 13/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L ++ I + + L +P + Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFIRILADATD-GSIPGDLILTLMGLYMPSMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ ++ +++ G + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIQAALLLAMITGSVAAFNSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKIL----PENHIWEDF 179 A + ++++ + + + + + +F+ + + + Sbjct: 121 APWSSEQETQVMERVESDVGLDLLVKGQFQPAPDGKGVVFVNDITDKGSKLEKVFVAQIV 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T+ + R + LK Y+ +D + T + G + Sbjct: 181 ARDTMRPSVMVAERGYVSELDDGRQVLDLKDGTRYEGVPTRLDYSVTEFENYQALIGQRA 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 E+ M S + F + I + L + +T++ +S Sbjct: 241 IREKNRDWDALPTPTLMQHSELAARAE-------FQWRISMFLCIPLLTMVVVPLSSVNP 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + I+ KS + G L ++I + Sbjct: 294 RQGRFAK-LFPAVLIYLVYFLAISAAKSAVEDGSLPSYIGLWSINAAMFVVAIAL 347 >gi|148546262|ref|YP_001266364.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] gi|148510320|gb|ABQ77180.1| permease YjgP/YjgQ family protein [Pseudomonas putida F1] Length = 383 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 111/349 (31%), Gaps = 17/349 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 14 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLFLIMGFRLPGFL 72 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + + Sbjct: 73 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSL 132 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G +I Q + + + + + + + Sbjct: 133 APLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKR 192 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + ++ N + L+ Y D + + + Sbjct: 193 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 252 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E+ R + + R + + + +P+++ +TL+A +S Sbjct: 253 PKPEVAEEVTEREALPTSELIGKEG-------LRERAELQWRLSLPILVFVVTLLAVPLS 305 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + I T++ ++ + G L Sbjct: 306 RVNPRQGR-FLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 353 >gi|326423843|ref|NP_760389.2| hypothetical protein VV1_1477 [Vibrio vulnificus CMCP6] gi|319999213|gb|AAO09916.2| Putative membrane protein [Vibrio vulnificus CMCP6] Length = 366 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 38/349 (10%), Positives = 104/349 (29%), Gaps = 7/349 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + S + A +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQQFISVLADASD-GDIPASLIMSIVALNMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+V+ A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLIQAALYLAVITSGVAAFNSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L +Q + + +FI K ++++ Sbjct: 121 SPWSMDRVEQLTEQVAAENSVDLLKKGQFQFTPDRSSVVFIDDIKDKQLSNVFVAQLMPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + S + Sbjct: 181 DSILPSVMFANGGEVKELSDGRQIISMKQGTRYEGVPTRVEYMITEFEQYDGLIGQRSVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + A+ + + + + + + +T++ +S R + Sbjct: 241 QRGRD----WDAIPTLELIGNPD-PEAQAELQWRVSLFVCIPLLTMLVIPLSAVSPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + I+ KS + G + L + ++I Sbjct: 296 FAK-MGPAILIYLAYFLSISATKSALEEGDISASIGMWPINGLLLLVAI 343 >gi|322514886|ref|ZP_08067903.1| inner membrane protein YjgP [Actinobacillus ureae ATCC 25976] gi|322119140|gb|EFX91290.1| inner membrane protein YjgP [Actinobacillus ureae ATCC 25976] Length = 367 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 113/351 (32%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ L L +++ F L + N L +P + Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLMFFSQQLITVLNSAVS-GKVPTDLVLSLLGLGMPALA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P V ++ SE+ + RA GI L SI V + + Sbjct: 61 QFMLPLSLFVALLLTLGRFYTESEITVMRACGIGQSLLTQVAFFLSIFTTALAVYNVFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++ + K N +M + + I E + D Sbjct: 121 TPWAINKQSEMLAEAKSNPRFSALSAGQFMTAGG----YVLFIENINNEQNKLNDIYVFQ 176 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D++ K + +++ + +T D +Q + Sbjct: 177 PDQQKKNRPSVVVAESGQLQGLPNGDQILTLENSTRYEGTENTADFRISHFDNYQAYLGY 236 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S +++++ F+ + A+ + + + + M L+A +S R + Sbjct: 237 QDVDSNEKLVQRADFNKLM-TDSSNEAKAELQWRFALIFAVPLMALLAVPMSSVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V + + + + + +KS G SG L + I L++++ Sbjct: 296 FAK-VIPAVLLYLIYFLLQSSLKSSGASGKLDATLLMPLVSIAFFILAMVM 345 >gi|242279362|ref|YP_002991491.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] gi|242122256|gb|ACS79952.1| permease YjgP/YjgQ family protein [Desulfovibrio salexigens DSM 2638] Length = 386 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 135/364 (37%), Gaps = 12/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L R FK + + G M L+ + L + + A L P Sbjct: 1 MKLLHRNIFKELISIFTLSISGFMGLILIGRLL-QFRDLFMGQSLGALEMAKLFMYLCPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P T++ + F +N +E+ ++ G+S+++LL ++ +L Sbjct: 60 FLLMLTPIATMLSIFLTFLRMNADNEITALKSGGLSLYRLLPAPIIFCLLCTGADFYFSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI-------FIGAKKILPENH 174 + G + + + ++ + + + + + ++ Sbjct: 120 YGLSWGTENFRNALMEFARTQSQLAIQPGVFNKNFPGLVFYADGVDEKSGIMRSVFVRDN 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + T+ + +I +I+ + K+ + + Q + + + + Sbjct: 180 TRKGMTATIVAPLGEIRTDPKMGRLLIHLENGKIYQQEKDQLSVLKFKNYDVRIPLANIL 239 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH---NYRAETQFYFLIVIPLMLVAMTLIA 291 G+ + S+ ++++ +++ + + + + +P+ + + + A Sbjct: 240 KGYDVDELRPKEMSWKKLVRISRAGDRAGDIDPGFFKKVQVEVQKRLALPVACLVLGMFA 299 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 ++ F R + + + + + YT++++ +FG+SG+L PV +P I +S Sbjct: 300 VPIACIF-RGLKQQYGLIISMGLFLVYYTMLSLGVTFGESGVLTPVIGLWLPNITFAIIS 358 Query: 352 ILIL 355 +++L Sbjct: 359 VVLL 362 >gi|294055919|ref|YP_003549577.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] gi|293615252|gb|ADE55407.1| permease YjgP/YjgQ family protein [Coraliomargarita akajimensis DSM 45221] Length = 382 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 34/379 (8%), Positives = 116/379 (30%), Gaps = 23/379 (6%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L R+ FK L + + ++ + + L +P Sbjct: 1 MLNLLHRHVFKEIAVAILLAMGLFIFVLLTGNAIRDVAALVAAGKLDAMTFIKLMGLLIP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L ++ L+ E+ ++ G+S++Q+ +P + + + +++V Sbjct: 61 YVAAYALPLGILTGTLMALGRLSSQREITAMKSAGLSLYQIASPVFFIAFIAMVLSLVVN 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS--------------NPQQDIFIGA 166 A + +++ + + ++ ++ Sbjct: 121 LDFAPRAKSAFKEMLASTISENPVKFIEEKKFITGFPGYVIYMGDHDGGLMKDFWVWELD 180 Query: 167 KKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST 226 + + + + D++ + + + D + ++ I + Sbjct: 181 DRKQVTRFVRAESGELDYDREANELVLRVYNATAELRDDDAPETLLGEDLQTIFFQETEF 240 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIK--------KMSFSNKSNIFHNYRAETQFYFLI 278 L + + + + +F ++++ + +A+ Q Sbjct: 241 ALPLERLFGQQKTRHVKIKNMNFAQLMEVREAALQAEAQSEEPGISKQRMQAQVQIQKNC 300 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 + ++ L ++++ R +A + Y ++ ++ L P Sbjct: 301 AMAFSTFSLALFGVPLAIQVGRKESYA-NLAIALIIAMTYYFLMIVVSWMEDRIELRPDL 359 Query: 339 AALIPVILTISLSILILLQ 357 +P IL + + ++ + Sbjct: 360 LIWLPNILFQGIGLYLIRR 378 >gi|310822424|ref|YP_003954782.1| hypothetical protein STAUR_5183 [Stigmatella aurantiaca DW4/3-1] gi|309395496|gb|ADO72955.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 371 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 119/364 (32%), Gaps = 13/364 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY K L ++ +L+FV+ + ++ +++ L P + Sbjct: 3 LLARYLLKELLAPLGVWVAFMFLLLFVMQFL-LGTEVLLGSAVTLTDIGRLILYLTPHFL 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P L+ ++ L+ EL +A+GIS QLL + +LL L+ Sbjct: 62 VKALPIAFLMAILLGLGRLSEDRELTALQALGISPVQLLLGPMAIGLLLAGLMALLAFTA 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKI-LPENHIWEDFTSI 182 G +L+ + + + + + H+ Sbjct: 122 QPWGLTSVKELVNEVIKKNVAGDVKSGVFYEDLSDLTLYAERVSREGGEWTHVLLHDDRE 181 Query: 183 TIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGRIPIDKNSTTLNIPI--------K 233 + R + ++ L++ ++ R D + Sbjct: 182 PSSPLLVLAQRGRVSMREGDEALRLVLEEGEVHRATRSTADYSLLRFEQGEISVGLGGSM 241 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 +F Q S E+I+ + KS + + + + ++ L+ Sbjct: 242 NRKSNRFRSQKEEMSPGELIQAAEEAEKSGG-NPRPFLMAIHMRLGNAVAPLSFALLGTP 300 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +++ ++ + + + Y + + ++ G L V AA +P IL L ++ Sbjct: 301 LAIGRKQAGR-AWGYLLTLSGYVLFYVLSRVFETLGNQEKLPMVLAAQLPNILFSVLGVV 359 Query: 354 ILLQ 357 + + Sbjct: 360 AMWR 363 >gi|15806095|ref|NP_294799.1| hypothetical protein DR_1075 [Deinococcus radiodurans R1] gi|6458807|gb|AAF10648.1|AE001958_2 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 394 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 44/384 (11%), Positives = 107/384 (27%), Gaps = 38/384 (9%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L L ++ L +S A ++P + Sbjct: 17 LTRYVTRELLPPLLAGTLLFTAILSFGYFF---ISSQWLSGVPVSLIARWIGYQLPDTLV 73 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +++P +++ +V F +N ELV +A GI + ++ P V +L+ +V + +A Sbjct: 74 KVLPMAVVLMTVVAFGRMNTERELVAVQAGGIGLGRVTRPAAVVGLLVTALSVWLSLWVA 133 Query: 125 TSGEKIGIDLIQQWKDNGDKQK------------------------SDIIPWMQISNPQQ 160 L + ++ + Sbjct: 134 PRANVETRGLYWDALTGAGLSQLVGKTVDLGQGLTLAMQGYDAGARQMQGVRVEKWDKDN 193 Query: 161 DIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP 220 + A + ND ++ V+ + + Sbjct: 194 FRQGMVVFADAGKFEGNQLSLTGYQVYRVDYAAAAALSGVADNDPAAFREAVQKVFPLVQ 253 Query: 221 IDKNS---TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA--ETQFY 275 + ++ L+ + + ++ + + R Sbjct: 254 VPEDRNAALNLDTGLSRKQTLAQYADAIGADAEGWPELITKLTAPGVPQSERDAARVNLN 313 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + +P + + L A +L F R + + + Y + ++ + G+L Sbjct: 314 RKLALPFANLVLVLAALPFALRFGR--TLGVSLGVALVIAVAYYLLFSVGLTLA--GLLP 369 Query: 336 --PVAAALIPVILTISLSILILLQ 357 P + I+ + +L + Sbjct: 370 GLPELGVWLANIVFALGGLWLLRR 393 >gi|189347121|ref|YP_001943650.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] gi|189341268|gb|ACD90671.1| permease YjgP/YjgQ family protein [Chlorobium limicola DSM 245] Length = 403 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 114/396 (28%), Gaps = 41/396 (10%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K ++ + + + ++ + L ++ +I+ A L + Sbjct: 1 MKIIDRYILKSHIGPFILAFITIVFVLVLQFLAGFSDRFLGK-GINIADIAELVMLQSAW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P LV I+ + + +SE+ + RA G+S+++L P ++ + LL + N Sbjct: 60 MVVFAVPMAVLVAVIMAYGTMTNSSEMTVFRASGLSLYRLAVPVLIVAALLSLLVERFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDF 179 + L+ + + + E + D Sbjct: 120 VVIPEANYRSKSLMMDIARAKPTFGLTENAFSSFIDGYSIFVRKTDEASKEIRGVVLYDL 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM----- 234 + + L +Q + K ++ Sbjct: 180 RNPKSRTMMSAERGVIRFSPDNRFLVMTLFNGEIHQIDQSDYHKYRAMRFGQHRLVFETT 239 Query: 235 ------DGFQKFSEQFASRSFYEII--------------------------KKMSFSNKS 262 + + S E+ ++ ++ Sbjct: 240 GFGFSRTSNDRIRGNISELSAGELHVAASALQRGIVSAERRVASITDAGPLQREQERIEA 299 Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + + ++Y I + L + + +R + + + +++I Sbjct: 300 DKMQYNKYLIEYYKKYAISVACFVFALAGIPLGV-LARRGGFGVGAGISLALFVLYWSMI 358 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + G+L PV + +T + +L + Sbjct: 359 IGGEKIAERGLLDPVLSVWSANAVTGLFGLFLLHRM 394 >gi|149190546|ref|ZP_01868816.1| hypothetical protein VSAK1_13861 [Vibrio shilonii AK1] gi|148835670|gb|EDL52637.1| hypothetical protein VSAK1_13861 [Vibrio shilonii AK1] Length = 371 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 116/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ L L ++ F ++ + + LA +P + Sbjct: 2 IIVRYLIRETVKSQLAIFLVLFLVFFSRQFIQVLADASD-GDIPAGLIMTLAGISMPTMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + +V F L SE+ + A GI L+ + ++L + Sbjct: 61 LLMFPLSIYIGILVTFGRLYAESEITVMNATGIGNKFLIRAAMYLAVLTTSLAAFNAFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A ++ + + ++ + + + + +FI + K +++ + Sbjct: 121 APWTQEQEVQIRERLASENSVELLQTGSFQRTPDGSSVVFIDSIKDKKLTNVFVAQLNPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +I K D+ + + + + +Y +P + Q Sbjct: 181 DSVLPSVISAKSGDVKELSDGRQVIALYDGVRYEGVPTRLEYMVTEFTDYEGVIGQREVQ 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 RS + +A+ + ++ I + + + +T++ +S R ++ Sbjct: 241 QRGRS----WMAIPTMELLGNPD-PKAQAELHWRISLVVCIPLLTMLVVPLSAVNPRQSK 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + I + F + I+ MKS + G + +I + Sbjct: 296 FAK-MGPAILAYFAYFMAISAMKSALEDGAFPSYIGLWPVNFALLLAAIGV 345 >gi|146283386|ref|YP_001173539.1| permease [Pseudomonas stutzeri A1501] gi|145571591|gb|ABP80697.1| predicted permease [Pseudomonas stutzeri A1501] Length = 373 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 116/362 (32%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSRELLVTMSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLLLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSMAPAALVAALVGWLSLGL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK--------ILPENHI 175 A G ++ Q + + + + + + Sbjct: 121 APQGIAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETN 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 T + ++ + + L+ Y D + + + Sbjct: 181 VSRQTGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S + + R + + N R T+ ++ + +PL++ +T++A ++ Sbjct: 241 PKPEVSMELSEREAMPTRELL-------GSDNLRHRTELHWRLSLPLLVFVVTVLAVPLA 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I ++ ++ G L L +++ +L+L Sbjct: 294 KVNPRQGR-FLKLLPAILLYMTYLALLIAVRGALDKGRLPMALGLWWVHGLFLAIGLLML 352 Query: 356 LQ 357 Sbjct: 353 FW 354 >gi|189485655|ref|YP_001956596.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287614|dbj|BAG14135.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 361 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 132/361 (36%), Gaps = 8/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL++Y K ++K L+ ++ + +L N + + + +P Sbjct: 1 MKILYKYITKIFVKIFLFTTAVIALVGIISELFRQTNLYIDNK-TPFYLILIHLLSDMPW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q +P L+ + +L++ +E+ +A GI+I +++ F + ++G + Sbjct: 60 WLIQALPISALLALLFALGDLSKNNEITAIKAAGINISRIIILFFIMGFVIGTGDFAIKE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + I++ K +K + I + I + E ++ ++ Sbjct: 120 FIVPKTS-LYNKAIEKEKIQKEKINIKTEFYSLIVPALSNTRITIDHLNTEENVMKNIAV 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT-----LNIPIKMDG 236 K KI H A++ I ND LK + + ++ ++I + Sbjct: 179 EKYSDKFKIEHLILAEVGIWENDSWLLKNGIIRNFNANFWNETYFEQYNSNIHIKPEHMA 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + + + K ++ R + + +I ++ Sbjct: 239 MAIQDVNYETMNMHALKKYINQLRLFGQ-TTVRERIILNIRFAAVYAYIVVMMIGIPFAI 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 F + + + + + I KS G++ IL P AA +P ++ ++ I +L+ Sbjct: 298 GFENKLGKILSSTLAMTAALIYWGTQAITKSLGENLILSPFIAAWLPNLIFSAIGIYLLI 357 Query: 357 Q 357 + Sbjct: 358 K 358 >gi|54298619|ref|YP_124988.1| hypothetical protein lpp2683 [Legionella pneumophila str. Paris] gi|53752404|emb|CAH13836.1| hypothetical protein lpp2683 [Legionella pneumophila str. Paris] Length = 359 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 112/354 (31%), Gaps = 2/354 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K T + +++ + N+ + L +P ++ Sbjct: 2 IIFRYLTKEVFLTLIALTAILVLIFMSNQFIQYLNRAAS-GSIPGFVIMKLLMLELPNLM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P V ++ + L SE+ + RA G QLL + ++ + +V+ Sbjct: 61 GLLLPLGFYVALLLAYGRLYAESEMTVLRACGYGPKQLLKHSFAMATVVLVVVAVVMIWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + LI+ Q + I++ QQ ++ + + Sbjct: 121 SPVIAVERTKLIRSTGIKTLVQTIMPGRFHAINSGQQIFYVQSMNRDHSQAEQIFMAKHS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + AD A + ++ + Q G+ + ++ Sbjct: 181 VQDNRLLWDVLWADKAFAEVNPQTGEEYIVLQNGKEYQGVPGHADYQIAEFASYKSKLPN 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + HN + + + I IPLM++ +TL+A +S RS + Sbjct: 241 PTVVMHDDARTAKTRDLWPLNNHNLKKAAELQWRISIPLMVLTLTLVAVPLSRVSPRSGK 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + + + +G + L IL + + Sbjct: 301 YSK-LLPAIIIYIFYANFMFVSRDAIATGKIPWWIGMWWVHAAVAILGILFIWR 353 >gi|323697852|ref|ZP_08109764.1| permease YjgP/YjgQ family protein [Desulfovibrio sp. ND132] gi|323457784|gb|EGB13649.1| permease YjgP/YjgQ family protein [Desulfovibrio desulfuricans ND132] Length = 391 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 117/366 (31%), Gaps = 12/366 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L R F K + + L+ V + + N + L P Sbjct: 1 MKLLQRQIFLELCKLFGLTVSCLLGLILVGRML-QLRSLFLSQNIGVLNILQLFFYLTPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I P T++ + F ++ +ELV +A G+S++++L V+ L +F + Sbjct: 60 FLLLITPIATMLSVFLTFLRMSTDNELVALKASGVSLYRMLPAPVLFCSLCTLFAFFISF 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 G + + + K + + E Sbjct: 120 WGLAWGMDMFKTKLYYFAKTHSKFALQPGVFNKEFPNITFYAHQVDNEKGELKFAFVRDD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-------- 233 ++ + ++ K+ + + + + N Sbjct: 180 SIKGTSVVVVAPEAEVVSNPQEAKIHVVFHNGRIFRQSGDELNILKFRKYSIKLDLGKLL 239 Query: 234 --MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 + ++ ++ +I K S N + +T+FY + +PL + L A Sbjct: 240 TGFNFAEQKAKDMPFFRLRDIRKDHSLMPHENERFFRKVDTEFYKRLTLPLGCFILGLFA 299 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 ++ R + + + + + YT+ +I S G+SG + P P IL I ++ Sbjct: 300 IPIA-SIFRGLRQQYGLLLAMGLFMVYYTMFSIGVSMGESGTIPPEYGMWAPDILFIFVA 358 Query: 352 ILILLQ 357 + L Sbjct: 359 LAGLRY 364 >gi|330873094|gb|EGH07243.1| hypothetical protein PSYMP_02391 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 375 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 114/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + ++L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAVLVGLLVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI Q + + + + + + + Sbjct: 121 APQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + S + + ++ + + L+ Y D + Sbjct: 181 MSNDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAAL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + R+ + + I +PL + +TL+A +S Sbjct: 241 PKPEISEEITDREAIPTSELFGN-------PAPRSVAELQWRISLPLSVFIVTLMAIPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + + + +++ Sbjct: 294 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLGIGLVLF 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|213968383|ref|ZP_03396527.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|213927021|gb|EEB60572.1| membrane protein [Pseudomonas syringae pv. tomato T1] Length = 378 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 113/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 5 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 64 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLLVAWLSFSL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI Q + + + + + + + Sbjct: 124 APQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKR 183 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + S + + ++ + + L+ Y D + Sbjct: 184 MSNDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAAL 243 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + R+ + + I +PL + +TL+A +S Sbjct: 244 PKPEISEEITDREAIPTSE-------LFGNPAPRSVAELQWRISLPLSVFIVTLMAIPLS 296 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + + + +++ Sbjct: 297 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLGIGLVLF 355 Query: 356 LQ 357 Sbjct: 356 YW 357 >gi|190150428|ref|YP_001968953.1| hypothetical protein APP7_1159 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250152|ref|ZP_07336354.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253325|ref|ZP_07339474.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|189915559|gb|ACE61811.1| hypothetical protein APP7_1159 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648007|gb|EFL78214.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651215|gb|EFL81369.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 367 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 112/351 (31%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ L L +++ F L + N L +P + Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLMFFSQQLITVLNSAVS-GKVPTDLVLSLLGLGMPALA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P V ++ SE+ + RA GI L SI V + + Sbjct: 61 QFMLPLSLFVALLLTLGRFYAESEITVMRACGIGKSLLTKVAFFLSIFTTALAVYNVFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++ + K N +M + + I E + D Sbjct: 121 TPWAINKQSEMLAEAKSNPRFSALSAGQFMTAGG----YVLFIENINNEQNKLNDIYVFQ 176 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D++ K + +++ + + D +Q + Sbjct: 177 PDQQKKNRPSVVVAESGQLQGLPNGDQILTLENSTRYEGTANVADFRISHFDSYQAYLGY 236 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S +++++ F+ A+ + + + L + M L+A +S R + Sbjct: 237 QDVDSNEKLVQRADFNKLMADQS-NEAKAELQWRFALILAVPLMALLAVPMSSVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V + + + + + +KS G SG L + I L++++ Sbjct: 296 FAK-VIPAVLLYLIYFLLQSSLKSSGASGKLDATLLMPLVSIAFFILAMVM 345 >gi|28868483|ref|NP_791102.1| hypothetical protein PSPTO_1272 [Pseudomonas syringae pv. tomato str. DC3000] gi|301384649|ref|ZP_07233067.1| hypothetical protein PsyrptM_18512 [Pseudomonas syringae pv. tomato Max13] gi|302058898|ref|ZP_07250439.1| hypothetical protein PsyrptK_02842 [Pseudomonas syringae pv. tomato K40] gi|302133011|ref|ZP_07259001.1| hypothetical protein PsyrptN_16554 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851721|gb|AAO54797.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|330963184|gb|EGH63444.1| hypothetical protein PSYAC_00750 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015232|gb|EGH95288.1| hypothetical protein PLA106_04717 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 375 Score = 100 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 113/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLLVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI Q + + + + + + + Sbjct: 121 APQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + S + + ++ + + L+ Y D + Sbjct: 181 MSNDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAAL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + R+ + + I +PL + +TL+A +S Sbjct: 241 PKPEISEEITDREAIPTSELFGN-------PAPRSVAELQWRISLPLSVFIVTLMAIPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + + + +++ Sbjct: 294 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLGIGLVLF 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|261211062|ref|ZP_05925351.1| predicted permease [Vibrio sp. RC341] gi|260839563|gb|EEX66174.1| predicted permease [Vibrio sp. RC341] Length = 366 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 33/353 (9%), Positives = 109/353 (30%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + ++++ + Sbjct: 121 APWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ + + + + L Y+ +D T + + G ++ Sbjct: 181 DSVLPSVMFSNSGAVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + +++ + + + + + +T++ +S R Sbjct: 241 STGRDWEALPTLSLLKNADRQAQAE-------LQWRLSLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + ++ KS + G L + + ++++ Sbjct: 294 GRFAK-MGPAILIYLTYFLTLSATKSAIEDGSLPVIIGLWPVNAALLFAALIV 345 >gi|262341159|ref|YP_003284014.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272496|gb|ACY40404.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 359 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 118/360 (32%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + L T ++ + +L VID+++ +++ Sbjct: 1 MKILDRYIIRNLLITFIFITVSLQLLSVVIDISQRMHRLENNQGSIKKALIFYYPYWSIW 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L SE+ + GIS+ +L+ P+++ +I++G ++L+ Sbjct: 61 LANTFSPISVFLSVIFFTSKLENNSEITAILSSGISLNRLIVPYLISAIMIGTVSLLINY 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 K Q+ + + + ++ +I + + +I ++F Sbjct: 121 YFLPMANKKKNQFHYQYLLSSRYKNKYEKNQTISTQISKNEYIFIRNFSRKKNIGKEFVY 180 Query: 182 ITIDKKNKIIH-RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK---MDGF 237 + K I + L E + I + Sbjct: 181 QKFNGKKLIYILKSKNIFGYKKKKIYVLSDYRETTIKKNYDFFIKGDYKIKKFSFTPEEL 240 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + YE+ K + K+ + ++Y +P T++ S+S Sbjct: 241 LPEEYIAETMNIYELKKFIDIEKKN--RNVNIHLNEYYQRTSLPFSTFIFTILGFSLS-- 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 S+ ++ + GI + I K + + + +P +L +++ + Sbjct: 297 -SKKSETGYNIILGIVLAVFYIFFMEITKIYSTKDTIPSYLSVWLPNVLLGIIALFFYWK 355 >gi|313680974|ref|YP_004058713.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153689|gb|ADR37540.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 377 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 118/382 (30%), Gaps = 30/382 (7%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY + + L + VF+ + ++ L + + VP Sbjct: 1 MFTILDRYILREVV-PVLLVSALLYVAVFLFGFFYVGSR--WLDGAPVLKVLTWLGYHVP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ Q++P + ++ F + ++ ++A G+S+ +LL P ++ LL F++ + Sbjct: 58 GVLVQVLPMAVVSAVVIPFGRMATEGAVLATQAGGVSLVRLLRPVLLLGFLLAGFSLYLS 117 Query: 121 NPIATSGEKIGIDLIQQ---------WKDNGDKQKSDIIPWMQISNPQQDIFIGA----- 166 + ++ G + S Sbjct: 118 ENVVPESNARVRGYWYDELTTPGHGLYRLRGKTVPLGNGIELFFSGYDWAHRAMTGVRLQ 177 Query: 167 -KKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVV--------EYQYG 217 K I+ D +R + + Sbjct: 178 LWKDRQVTVIFADRGVYQGRDLKLTGYRIYTVDYAAIDGLLNASDAQLPARLQQVFKNVS 237 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ--FY 275 ++ STT+ + + D + + + + R + F+ Sbjct: 238 VPRSEEASTTIKVGLSRDEALANFADPLAADTLSLSEAWQRYTDPKLAPADRTDAGLAFH 297 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + +PL V + LI+ ++ + R P + + + Y + + +S G G+L Sbjct: 298 SKLALPLANVVLVLISLPFAVYYGR--SPGLSMGMSVMIAVGYYLVFLLARSMGGLGMLP 355 Query: 336 PVAAALIPVILTISLSILILLQ 357 P AA +L + ++ + Sbjct: 356 PALAAWGANLLFAFVGWRLIRR 377 >gi|327481779|gb|AEA85089.1| permease [Pseudomonas stutzeri DSM 4166] Length = 373 Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 116/362 (32%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSRELLITMSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLLLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQRRLLAYSLAPAALVAALVGWLSLGL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK--------ILPENHI 175 A G ++ Q + + + + + + Sbjct: 121 APQGIAEVDRILNQQDSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETN 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 T + ++ + + L+ Y D + + + Sbjct: 181 VSRQTGKESGLSVLVAESGRQEIQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S + + R + + N R T+ ++ + +PL++ +T++A ++ Sbjct: 241 PKPEVSMELSEREAMPTRELL-------GSDNLRHRTELHWRLSLPLLVFVVTVLAVPLA 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I ++ ++ G L L +++ +L+L Sbjct: 294 KVNPRQGR-FLKLLPAILLYMTYLALLIAVRGALDKGRLPMALGLWWVHGLFLAIGLLML 352 Query: 356 LQ 357 Sbjct: 353 FW 354 >gi|315179053|gb|ADT85967.1| hypothetical permease [Vibrio furnissii NCTC 11218] Length = 367 Score = 99.8 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 37/340 (10%), Positives = 103/340 (30%), Gaps = 11/340 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L ++ + + + +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFVLFLVFLSQKFIRVLADASD-GEIPARLILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + I+ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLGIITSCLAGFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW--EDFTS 181 + + +++Q + + + +FI + ++++ + Sbjct: 121 SPWSQDKVQSVMEQLAAENSVDLLQKGQFQRSPDGSSVVFIDNIENKKLSNVFVAQLTPR 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +I D + + Y+ +D T + + G + Sbjct: 181 ESILPSVMFSDAGDVKELSDGRQVITMYNGTRYEGVPTRVDYMVTKFDEYEGLIGQRAVK 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E+ ++ + +++S + I + + + +T++ +S R Sbjct: 241 EKGRDWEAIPTLELVKNADRSAQAE-------LQWRISLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + + I + I+ KS + G + + Sbjct: 294 GRFAK-MGPAILIYLTYFLAISATKSALEDGSIPAIVGMW 332 >gi|189501496|ref|YP_001957213.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] gi|189496937|gb|ACE05484.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] Length = 357 Score = 99.8 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 114/353 (32%), Gaps = 2/353 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K +L + L+ L ++++ +ID+ E S A +P Sbjct: 1 MKLLDRYILKKFLFSFLFILCLIILIITLIDITEKNEYFI-RHKLSFREIADYYYNFLPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P + I V L + +E++ + G+S + L P+++G+ L IF ++I Sbjct: 60 MTNMVSPITIFITTIFVTSRLAQRTEIIAILSGGVSFVRFLVPYLIGATFLAIFNFMLIG 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I K + ++ D+ + S I ++ + + + Sbjct: 120 WILADANKKRVAFEIEYVDSPYRSSSRNIHIKLSTDTYLYVGYYRSYNGLGTDVTLETIR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + L + + + F Sbjct: 180 DNRLMEKISAKAIRWVEESGQWQLKDWICRKIDGLDEHITSGKAMDLTLNLHPEDFSINP 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E+ K + + + T+ Y + P + +TL+ VS SR Sbjct: 240 KLHEMLTLTELDKHIQKLREKGTDNLNFFLTEKYVRYMSPFAAIILTLMGVVVSARKSR- 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +A G + + + +P I+ +++++ Sbjct: 299 GGVGLQIALGFILALIYIAFFLFARGAANVKGNNLLLTIWMPNIVFSIITLIL 351 >gi|307299316|ref|ZP_07579117.1| permease YjgP/YjgQ family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915112|gb|EFN45498.1| permease YjgP/YjgQ family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 1438 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 111/337 (32%), Gaps = 2/337 (0%) Query: 18 LYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIV 77 ++ L I+ ++L + M I + +L +P I IP L+ Sbjct: 4 IFVGLAGFIIFVSLELLYYLSDMIIRYKVGIDKLFLLIYYNLPEFIVLGIPVGILLAIFW 63 Query: 78 VFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQ 137 V + +EL+ + GIS+ +L+ PF++ I+ F L+ + + + + + + Sbjct: 64 VLSRMRSDNELIALQTHGISLKRLVIPFLLIGIIFSGFAYLLNDYLVPAASTKANEAMAR 123 Query: 138 WKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDAD 197 + + +MQ S + + E + Sbjct: 124 FVYKQPEVTLKENVFMQDSQGRMIYVRRIDQDTKELKNVSIYEVSRGQVTLTTAESAVIS 183 Query: 198 LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 K + + E + + + + I ++ + + ++ E+ + Sbjct: 184 SNKWILSKANIYQTDESGFLGVEMQFGTAEFEIDEDIERYLASFKSPKEKTSKELRDDIE 243 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + I + E + + + + L+ VSL F+ ++ V + Sbjct: 244 AFKNTGI-NTSSLEVALQEKYSMSIAPLVIVLLGVPVSLMFNLQSK-SWSVILTFLLVVI 301 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + GK ++ P A IP I L ++I Sbjct: 302 YQGSGAWLSGMGKENLINPSLAPWIPNITFSILGVII 338 >gi|330938932|gb|EGH42431.1| permease YjgP/YjgQ [Pseudomonas syringae pv. pisi str. 1704B] Length = 375 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 115/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI Q + + + + + + + Sbjct: 121 APQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 S + + ++ + + L+ Y D + M Sbjct: 181 MSSDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAML 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + + R+ + + I +PL + +TL+A +S Sbjct: 241 PKPEISEEITDREAIPTSELIGD-------PAPRSVAELQWRISLPLSVFIVTLMAIPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + +S+ +L+ Sbjct: 294 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLSIGLLLF 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|117925962|ref|YP_866579.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] gi|117609718|gb|ABK45173.1| permease YjgP/YjgQ family protein [Magnetococcus sp. MC-1] Length = 392 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 118/355 (33%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY T+ L+ LV + + + + + S+S + +P Sbjct: 1 MKRLSRYLLTECALTSFTALVVLTTLVLLPQIL-MLVDLWVNKSVSVSVLGKMVLLIMPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P LV ++ L + SEL++ +A GIS+ ++ P V +++ ++ + Sbjct: 60 FLVASLPMALLVGILIGLGRLAQDSELIVIKASGISLLRIFYPLSVPIVVVTACSLYLNW 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ I + + + Sbjct: 120 FLVPDSHTLFQNIRVALLSQNTFSIKTQTFNNTIPGLTIYVNRQSHGGKLLEGLLIHDER 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ--YGRIPIDKNSTTLNIPIKMDGFQK 239 I + LK+ +Q G N +T ++ + + + Sbjct: 180 DPDMPVTVIAKSGMLHRGSTGETALLLKEGSRHQMAPGNAYRRLNFSTYDLELGIAFETE 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + Y I + AE +++ IPL + + +A ++++ + Sbjct: 240 SSSGDRAIRSYSIADLEQARIAQDPLLASEAEREWHRRFAIPLATLLLGFLAIPLAMQQN 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + + ++T+ ++ K G++ P A P + + + + Sbjct: 300 QRSGRGFGFIVAISVLILQFILLTLGEAMAKRGLISPAMGAWSPNLALLLFTSYV 354 >gi|30248805|ref|NP_840875.1| hypothetical protein NE0801 [Nitrosomonas europaea ATCC 19718] gi|30180400|emb|CAD84712.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 358 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 114/359 (31%), Gaps = 15/359 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY + L + + + L + + L + + Sbjct: 1 MKIIERYITRELLFPFIVVTVILIGLFVSFSVARFLTSAVTET-LGTAAMFKLVGLKTII 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V I +NR E+ + R G +++ V ++ + I + ++ Sbjct: 60 ALEVLVPIAFYVAVIYGLSRMNRDQEINVLRTAGYGDNRIIRTVFVIALPIAILSGILSV 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + Q + + + + + IFI K L + Sbjct: 120 YARPWAYAESYIMDAQAEAELNTNRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGVFHYI 179 Query: 182 ITIDKKNKIIHR--KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T + + II R + ++L++ Y+ + ++ I + + Sbjct: 180 RTTEDREIIISREGYQQPMTAEQWPHIELREGQIYRLSFDTVKDSAIRFEKMIYFNENDQ 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +K + + R + + + P+ V + LIA S + Sbjct: 240 AQN---------YRRKAASTRSLWDSEEPREIAELQWRLSRPVATVLLALIAVSFTRTAP 290 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R ++ + Y + + K++ + G++ + + L I+++L+ Sbjct: 291 RKDKTDRTFLVAALVFAVYYNLSGLAKTWVEQGVVAAMPGVWW---VYGLLIIIVMLRL 346 >gi|255613816|ref|XP_002539536.1| Inner membrane protein yjgQ, putative [Ricinus communis] gi|223505146|gb|EEF22847.1| Inner membrane protein yjgQ, putative [Ricinus communis] Length = 283 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 100/287 (34%), Gaps = 15/287 (5%) Query: 82 LNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDN 141 + +SEL++ R GIS+ + + ++ + T L+ IA EK+ + Q D+ Sbjct: 1 MASSSELIVMRTSGISLQTIAKMLLSIGLVFALVTFLIGEIIAPISEKMAQRIRIQATDS 60 Query: 142 GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAII 201 Q W++ + ++ + D D + ++ + AD Sbjct: 61 VVAQDFQSGLWIKDGSSFVNVATVM-----PDTSLVDIRIYDFDAQFRLRNISHADKGYF 115 Query: 202 YNDKVKLKKVVEYQYGRIP---------IDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 +D L V + + T I+ + S + + Sbjct: 116 EDDHWILSNVTQTKMHTSKSAQNNSVTSQFFKQTKWESLIRPELLNVLLVLPEKMSAWNL 175 Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 + + +++ R + + +V PL + M ++A R+ + GI Sbjct: 176 YSFIQYLHQNGQRST-RYQVALWSKLVYPLACLVMVMLALPFGFLQQRAGGISAKIFAGI 234 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 F G + + + G P+ +A+ P +L ++ + +L E Sbjct: 235 FLGVVYQIMNRVFVHLGVLNDWSPLVSAISPTLLFLAAGLGMLYYVE 281 >gi|170723397|ref|YP_001751085.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] gi|169761400|gb|ACA74716.1| permease YjgP/YjgQ family protein [Pseudomonas putida W619] Length = 371 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 113/349 (32%), Gaps = 17/349 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + S ++ R+P + Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPSVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGLTMAPAALVALLVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G +I Q + + + + + + + Sbjct: 121 APLGVAQVQQIIGQQDALTEFDTLVPGRFQTLRDGSRVTYTEELTDDRSNLTGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + ++ N + L+ Y D + + + Sbjct: 181 FNQDKTKDRAPSVLVAEKGHQEVQADGNRYLVLQNGYRYDGNPGQADYRAIKYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + + + R + + I +P+++ +TL+A +S Sbjct: 241 PKPEVSEEVTEREAIPTSQLIGNAG-------LRERAELQWRISLPILVFIVTLLAVPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + I T++ ++ + G L Sbjct: 294 RVNPRQGR-FLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|260427478|ref|ZP_05781457.1| permease YjgP/YjgQ [Citreicella sp. SE45] gi|260421970|gb|EEX15221.1| permease YjgP/YjgQ [Citreicella sp. SE45] Length = 379 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 128/362 (35%), Gaps = 15/362 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY + +F L +++ ++ + +++ + + +P ++ Sbjct: 4 FDRYMLSQLMVVFGFFALVLVMVYWLNRSVGLFDELIANGH-TAGIFLEFTLLALPGVVA 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + V ++ SEL + +A G+S W+L P +V ++G ++ + + Sbjct: 63 IVLPMAAFGAAVYVTNRMSNESELTVLQATGLSPWRLARPVLVFGAIIGAMMAILSHVLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + ++ P + + + I PE + + F S Sbjct: 123 PASIGQLRERESEISGSVSARLLHEGTFLH---PTRGVTFYIRDITPEGELRDVFLSDRR 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKK-------VVEYQYGRIPIDKNSTTLNIPIKMDGF 237 D I + + + +D KL + D + T +I + Sbjct: 180 DPDRAIAYTAQSAYVLRDDDGPKLTMRSGLAQTLRAEDQTLSTTDFENLTYDISGLVTQN 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI--AASVS 295 + S +E++ ++ + + PL+ V LI AA ++ Sbjct: 240 GPPRRRARQISTWELLTDTEAVSEEVKDSVGEVLEEAHMRFEQPLLCVVAALIGYAALMT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 FSR + IV F+ + + L P+ +P I+ + ++ ++L Sbjct: 300 GGFSRFGVTKQIVGAIFLLVFIKIVESMVTTPVHANAALWPLI--YLPSIVGLIIAGVLL 357 Query: 356 LQ 357 + Sbjct: 358 QR 359 >gi|118602882|ref|YP_904097.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567821|gb|ABL02626.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 360 Score = 99.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 113/359 (31%), Gaps = 4/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K T +L + + + E +G+ NY++ + +P Sbjct: 1 MKILDRYIVKTMAFYTSAVMLVWLGIYAFFNFLEEVTFIGQ-ANYTVFEVTKYVISDIPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I L+ +++ +L TS+LV+ R+ G+SI Q+ N V +++ + + Sbjct: 60 VVYSYSSVIILLGSLLALGHLASTSQLVVIRSAGVSIMQISNIVVRAALMFIAIVIFIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + L + K+ W++ S + ++ + Sbjct: 120 LVTPITIEYAESLRAKALGENITFKNQQGFWLKDSELFIHVKKNFDGKSFQDVTLIKLRA 179 Query: 182 ITIDKKNKIIH--RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + D + + ++ + + Sbjct: 180 PDTLDSIVHSDSAISNGDNLELSQSIHYQFGKDGNLTTFSENNFEKYSVQVSFNKKLIEN 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + S + + +++ F N E + Y ++ P+ L+AM L + Sbjct: 240 LKKDPRELSTWHLYQQIRFLTI-NHLAADIFEVEIYKRLMKPITLIAMILFSMLFVFGSL 298 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + G+ I +A IP +L + +L +K Sbjct: 299 RDASLGKNIFLGLMMSLFFELASRIGGVLSLRFDYNHFLSASIPTLLMLVFVWALLKKK 357 >gi|119944176|ref|YP_941856.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] gi|119862780|gb|ABM02257.1| permease YjgP/YjgQ family protein [Psychromonas ingrahamii 37] Length = 358 Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 113/352 (32%), Gaps = 11/352 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K+ + L +++ I Q L +P + Sbjct: 2 ILLRYLMLETFKSQIGILFVLVLIFVSQKFITILAQAIN-GVIPADLVMTLLYLNLPQLG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + + L+ SE++ + G S +L ++ S L F + Sbjct: 61 TLMLPISFYLAVLFAHGRLHGESEMIAMSSCGYSPNNVLKATLLLSFLTFAFAAYNSLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A E I +I++ + N + + S ++I + I+ Sbjct: 121 APLSEDKMISVIEEAQANTSSATLIEGRFHKTSGNGSVVYIEKSADKKLDKIFAAHWPED 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV-KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + ++ + L + L Y + + + ++ + Sbjct: 181 RKQAPSVLTAAEGYLESKKDGTWLTLTDGQRYAGIVGQHEFDHSEFKTYEVHIANREVQK 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 Q + N + + + + I IP+ ++ MT +A ++ R Sbjct: 241 QVRGVQALP-------TAALFSVDNPKYQAELQWRIGIPVSILLMTFMAVPLAKVNPRQG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + +++ KS + G L PV + I I + L I++ Sbjct: 294 RYSK-LLPALALYLTFFLLLSTAKSLIEDGSL-PVFSIWIVQISFLLLGIIL 343 >gi|71738034|ref|YP_273425.1| hypothetical protein PSPPH_1158 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487386|ref|ZP_05641427.1| hypothetical protein PsyrptA_29203 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623815|ref|ZP_06456769.1| hypothetical protein PsyrpaN_01510 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649166|ref|ZP_06480509.1| hypothetical protein Psyrpa2_15674 [Pseudomonas syringae pv. aesculi str. 2250] gi|298485819|ref|ZP_07003897.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558587|gb|AAZ37798.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159643|gb|EFI00686.1| Putative membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322888|gb|EFW78979.1| hypothetical protein PsgB076_20537 [Pseudomonas syringae pv. glycinea str. B076] gi|320329803|gb|EFW85791.1| hypothetical protein PsgRace4_11121 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867846|gb|EGH02555.1| hypothetical protein PSYAE_11461 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330989713|gb|EGH87816.1| hypothetical protein PLA107_32136 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009018|gb|EGH89074.1| hypothetical protein PSYTB_04815 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 375 Score = 99.8 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 115/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI + + + + + + + + Sbjct: 121 APQGATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 S + + ++ + + L+ Y D + M Sbjct: 181 MSGDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAML 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + + R+ + + I +PL + +TL+A +S Sbjct: 241 PKPEISEEITDREAIPTSELIGN-------PAPRSVAELQWRISLPLSVFIVTLMAIPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + +S+ +L+ Sbjct: 294 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHGIYLSIGLLLF 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|258625833|ref|ZP_05720712.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258582071|gb|EEW06941.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 366 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 34/351 (9%), Positives = 110/351 (31%), Gaps = 11/351 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L++Q+ + + + +FI + ++++ + Sbjct: 121 SPWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ D+ + + + L Y+ +D T + + G ++ Sbjct: 181 DSILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + +A+ + + + + + + +T++ +S R Sbjct: 241 SSDRDWEALPTLSLLKN-------SDLQAQAELQWRLSLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + I + ++ KS + G L + + ++ Sbjct: 294 GRFAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPVNAALLIAAL 343 >gi|197287277|ref|YP_002153149.1| permease [Proteus mirabilis HI4320] gi|194684764|emb|CAR46793.1| putative permease [Proteus mirabilis HI4320] Length = 365 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 124/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L M++ F L EI N + L +P + Sbjct: 2 IIIRYLARETLKSQIAILFILMLIFFSQKLVEILG-AAVEGNIPTNLVVSLLWLGIPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A GI L+ ++ S+L + + + Sbjct: 61 QLILPLSLFLGLLMTYSKLYVESEITVMNACGIGKKALVQAALLLSLLTSVLAAGNVVWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++ K N + S+ +++G+ K ++ T Sbjct: 121 IPWSSVHQEQVLEDAKANPSLAALMEGQFKMSSDRNMVLYLGSVKGNQFQDVFLAQLRPT 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + N + +Y + ++ + Sbjct: 181 QNQRPSVVVADKGYTKELPNGNQVVVLSEGTRYEGTAVLRDFRITDFTDYQAVIGHRES- 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N+ + +F++ + + +V M L+ +S R + Sbjct: 240 ----TISRNRVEQKTMNELWHSTEPESIAEFHWRLTLIFSVVIMALMVVPLSEVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G+ G + P+ A + +L++L+ Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSLRSSGEKGKVDPLIAMWTVNGIYFALALLL 345 >gi|66044343|ref|YP_234184.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|302188386|ref|ZP_07265059.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae 642] gi|63255050|gb|AAY36146.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae B728a] gi|330899517|gb|EGH30936.1| permease YjgP/YjgQ [Pseudomonas syringae pv. japonica str. M301072PT] gi|330950946|gb|EGH51206.1| permease YjgP/YjgQ [Pseudomonas syringae Cit 7] gi|330969234|gb|EGH69300.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aceris str. M302273PT] Length = 375 Score = 99.4 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 115/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI Q + + + + + + + Sbjct: 121 APQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 S + + ++ + + L+ Y D + M Sbjct: 181 MSSDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAML 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + + R+ + + I +PL + +TL+A +S Sbjct: 241 PKPEISEEITDREAIPTSELIGN-------PAPRSVAELQWRISLPLSVFIVTLMAIPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + +S+ +L+ Sbjct: 294 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLSIGLLLF 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|330962173|gb|EGH62433.1| hypothetical protein PMA4326_26812 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 375 Score = 99.4 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 113/362 (31%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFMIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAALVGLVVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI Q + + + + + + + Sbjct: 121 APQGAAQFSQLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSDDRSQLTGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 S + + ++ + + L+ Y D + Sbjct: 181 MSSDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGTAL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + R+ + + I +PL + +TL+A +S Sbjct: 241 PKPEISEEVTDREAIPTSELFGN-------RTARSVAELQWRISLPLSVFIVTLMAIPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + +++ +++ Sbjct: 294 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLAIGLVLF 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|82701536|ref|YP_411102.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] gi|82409601|gb|ABB73710.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] Length = 358 Score = 99.4 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 109/356 (30%), Gaps = 12/356 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY + L + + L + + + L + + Sbjct: 1 MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAV-TDSLGLIPVLRLVFLKTLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V I+ L+R E+V+ R+ G+S +++ ++ +I +G+ + L Sbjct: 60 ALEVLMPIALYVAVIMGLGRLHRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN--HIWEDF 179 + L Q + + + + + I++ AK + ++ Sbjct: 120 FARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVIYVQAKDSSGKQMGEVFHYL 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + +L ++ L Y+ + Sbjct: 180 NKHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGN 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ +K + + R + + + PL + + LIA S Sbjct: 240 VTD---------YRRKAASTAALMQSDQPRDTAELQWRLSRPLATILLALIAVPFSRASP 290 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + Y + + +++ + G + V + + +I +L Sbjct: 291 RQTKGDKTYYLAALVFAIYYILSGLAQTWVEQGTIGRVPGVWWLYAVMLLFAISLL 346 >gi|26987718|ref|NP_743143.1| permease YjgP/YjgQ family protein [Pseudomonas putida KT2440] gi|24982406|gb|AAN66607.1|AE016288_6 conserved hypothetical protein [Pseudomonas putida KT2440] gi|313497348|gb|ADR58714.1| Permease YjgP/YjgQ family protein [Pseudomonas putida BIRD-1] Length = 371 Score = 99.4 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 111/349 (31%), Gaps = 17/349 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G +I Q + + + + + + + Sbjct: 121 APLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + ++ N + L+ Y D + + + Sbjct: 181 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E+ R + + R + + + +P+++ +TL+A +S Sbjct: 241 PKPEVAEEVTEREALPTSELIGKEG-------LRERAELQWRLSLPILVFVVTLLAVPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + I T++ ++ + G L Sbjct: 294 RVNPRQGR-FLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|95928709|ref|ZP_01311455.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] gi|95135054|gb|EAT16707.1| permease YjgP/YjgQ [Desulfuromonas acetoxidans DSM 684] Length = 395 Score = 99.4 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 121/361 (33%), Gaps = 10/361 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y + + L L+ ++ + L ++ + + ++S L A +P Sbjct: 6 LQTYISREIIAPFLLSLVLFTFVLLLSRLLKLIEMVVDK-GVAVSEILHLFACLLPSFFV 64 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ F L+ SE+V +A G S+++L P ++ ++L+ FT + Sbjct: 65 ITVPLSFLLAVMLAFGRLSADSEIVAMKAAGFSLYRLSQPVLIIALLVCGFTAYLTLVAE 124 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 +G + + + + + Sbjct: 125 PAGRVKLKQRLIDIAYSKAAVALQPQIFNEEFDGLMMYANDVDNQTNTMTGVFISDERMG 184 Query: 185 DKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + I+ ++ + N + L+ ++ ++ ++ + Sbjct: 185 NTPSIIVAQRGEIRSDRTNGSLLMHLRDGSIHRPVIRSGKRSYQVVDFQSYDVNLSLNTA 244 Query: 243 QFASRSFYEIIKK------MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 +S K+ M + + + +V+P + L+A + + Sbjct: 245 DKEEKSLNLKPKEMTTKALMQADPELSEEKQRERRVELMERLVLPFSPLIFALLAVPLGI 304 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + +F + Y +++ K+ + + + P + I + IL+L+ Sbjct: 305 RSHRS-PKGGGFSVALFIFLLYYLCLSVAKTMVQENNWPLLGSLWGPSVAFIVVGILLLI 363 Query: 357 Q 357 + Sbjct: 364 R 364 >gi|110643218|ref|YP_670948.1| putative permease [Escherichia coli 536] gi|47155053|emb|CAE85252.1| putative permease [Escherichia coli] gi|110344810|gb|ABG71047.1| putative permease [Escherichia coli 536] Length = 359 Score = 99.4 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 114/350 (32%), Gaps = 2/350 (0%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y ++ + L +L + + Y ++ ++ +P + ++ Sbjct: 7 YLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPRTLVELS 65 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PFI L+ IV L++ SEL R+ G SI+++ +V IL + + +A+ Sbjct: 66 PFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEWVASPL 125 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 ++ + + G+ + + + + + Sbjct: 126 QQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRDDLSLE 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + I R + + ++ ++ S + Sbjct: 186 SYIFARSASIEDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLEELSMPGNTF 245 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S ++ + + ++ + + + P++ +AM L+A + RS Sbjct: 246 SVRQLNHYIHYLQETGQPSSD-YRLALWEKLGQPILTLAMILLAVPFTFSAPRSPGMGSR 304 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 305 LAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLMALSLVYW 354 >gi|85709344|ref|ZP_01040409.1| predicted permease [Erythrobacter sp. NAP1] gi|85688054|gb|EAQ28058.1| predicted permease [Erythrobacter sp. NAP1] Length = 417 Score = 99.4 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 125/361 (34%), Gaps = 9/361 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L A L+ + + + + + I + +P Sbjct: 8 IDRYIFRLVIVPMLGVFALAASLLLLDKMLRLFDFVAVEGG-PIGVVFKMLGALIPEYAS 66 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IP L+ ++ F L +SEL RA+G+S W+LL +++L + ++ I Sbjct: 67 LAIPLGLLLGVLLAFRKLATSSELDTMRAVGLSYWRLLRVPYAITLVLVAVNIALVFYIQ 126 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + +++ ++ S + Sbjct: 127 PVSRYYYEQMEYELRSGALGASIKVGEFTTLADRMALRIERSEDDGQRLIGIFARVSNSR 186 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-----MDGFQK 239 D+ I R+ + +A + + ++ E + + L+ + ++ Sbjct: 187 DQVLSISAREGSFMATTDDPDTIILRLTEGTIVQDTGSETPRVLSFSRHDLPIDLPAVEE 246 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRA--ETQFYFLIVIPLMLVAMTLIAASVSLE 297 F + + Y + + + + R + F + V +M++ M L+A ++++ Sbjct: 247 FRARGEASREYILPELLRIGWSEQAEEDERDAVQAAFNYRTVEVVMMLLMPLLAVALAIP 306 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS + V I + I + G + P+ A P +L I + + Sbjct: 307 PKRSTS-ALGVFVSIILVVAYHKINQYGEDIAALGRIDPIIALWGPFCAFAALIIWMYYR 365 Query: 358 K 358 Sbjct: 366 T 366 >gi|262170557|ref|ZP_06038235.1| predicted permease [Vibrio mimicus MB-451] gi|261891633|gb|EEY37619.1| predicted permease [Vibrio mimicus MB-451] Length = 366 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 34/351 (9%), Positives = 110/351 (31%), Gaps = 11/351 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L++Q+ + + + +FI + ++++ + Sbjct: 121 SPWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ D+ + + + L Y+ +D T + + G ++ Sbjct: 181 DSILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + +A+ + + + + + + +T++ +S R Sbjct: 241 SSGRDWEALPTLSLLKN-------SDLQAQAELQWRLSLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + I + ++ KS + G L + + ++ Sbjct: 294 GRFAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPVNAALLIAAL 343 >gi|206901914|ref|YP_002251684.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] gi|206741017|gb|ACI20075.1| putative permease, YjgP/YjgQ family [Dictyoglomus thermophilum H-6-12] Length = 362 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 119/361 (32%), Gaps = 11/361 (3%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 +Y F L + G + LV +I + + + S L ++P + Sbjct: 4 KTYHKYIFSEILGPFFLGIFGFI-LVMLIQILYEFSDFIIMRRVSFETVLKLLYYKIPSL 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 +IP L I F L R E+ R+ GI + L ++ S+ L Sbjct: 63 FVFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFFTLALAPLLFSVFLSFVLWFFTYS 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + LIQ++ + ++ + KKI+ + +I ++ Sbjct: 123 LIPESNYRSNRLIQKYFFLNPAPVKGENIFFHD---EEGRYYYVKKIIEDKNIMQNVLVF 179 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDGF 237 NK A+ A+ D + LK V + G +N+P Sbjct: 180 DTSSSNKYPIIYTAEEAVWNRDSLVLKNGVVHHLGDDAFVIWEGKFEEFKINLPQDFMYI 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 E+ K++ K+ + + Y I + + L+ SV L Sbjct: 240 FYRDRTPQEMPTSELRKRIEVYKKAGV-SARSYLVENYLRIAQSVAVPIFALMGFSVILL 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + I F Y I +S G+ + P +A +P I SLS+ + + Sbjct: 299 TGRGGRLWGTAF-SIIIAFFYYGFNIIARSLGEYAVFSPFLSAWLPNITLGSLSLGVFIW 357 Query: 358 K 358 K Sbjct: 358 K 358 >gi|121595376|ref|YP_987272.1| permease [Acidovorax sp. JS42] gi|120607456|gb|ABM43196.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 355 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 123/355 (34%), Gaps = 12/355 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + L LL L+ V++L ++ + + + R+P + + Sbjct: 8 YLRRRVGTQILVLLLVITALMQVLELLDVTTDVLKR-DQGFIGIVYYGLLRLPAELVMAL 66 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P L+ ++ N+ R E+ R G+S+ +LL + + +L + ++ + + Sbjct: 67 PPAVLLGTLMALANMARNLEIATMRTAGLSMMRLLGYLLPLAAVLAVAQFVLSDHVLPPA 126 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 E L + W + + W S + P+ D D + Sbjct: 127 ENG---LKEWWSASAPADDTPTKRWAHTSGGTVS----MESTSPDGRRLIDVRLYVRDDR 179 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKFSEQF 244 I R A A + K V E+ YG +++ + ++ + + Sbjct: 180 GLIQSRLTATEAQWDGQVWRFKGVNEFVYGDRRVERIQVAERAWDTNLRPEDVLRLDVAR 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + ++ ++ + ++ Y PL + M L+A ++ R Sbjct: 240 PNLSTAMLAEVIA-GTRTGTQPHRYYQSVLYRSYAAPLAIFVMLLLALPTAVSLPRGTGG 298 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 +A + G I+ + G + P+ AL L ++ +L L E Sbjct: 299 GSRMAMALILGLGFLLCDGIVAALGLAARWPPLVIALAAPALFAAIGLLQLRASE 353 >gi|256823038|ref|YP_003147001.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] gi|256796577|gb|ACV27233.1| permease YjgP/YjgQ family protein [Kangiella koreensis DSM 16069] Length = 370 Score = 99.0 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 37/357 (10%), Positives = 112/357 (31%), Gaps = 13/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L +T L + + + Q + S S + P++I Sbjct: 2 ILSRYLNREVLTSTTAILGVLFAIFMSQRIVKYLAQAA-AGDISGSMVWQMVGLYSPILI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + R++G+S L+ ++ + + V + Sbjct: 61 GFLLPLAFFLGCLLAFSRLYVDSEMAVLRSVGVSERFLIRMLAPAALFIAVVGGAVTLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + + + + Q ++ + + + + + Sbjct: 121 SPQANELTYQIRDEHASKLELSMLTPGHFQMFQQGQGVVYADSSERSTKLGNFFLAEMPS 180 Query: 184 IDKKNKI----IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 N + + + ++L Y+ T ++ Sbjct: 181 EMNPNTRIISAQSAERFYDESLDKNFLQLNDGHVYELDGNQQVSKVTRFERYFARLDAER 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + ++ + ++ +F++ + +P+ + +A +S Sbjct: 241 SIVSRRKISATSTPELLASGDGAS-------WAEFHWRLAVPISVPLFMFLAIPLSRVRP 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + + +I + + +S + + ++ L+ +L Sbjct: 294 REGKFAK-MLPALMVYIGYIVLIVVFRRALESEQIPGWLGFIPIYLVMAFLAARLLY 349 >gi|258622808|ref|ZP_05717826.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258584996|gb|EEW09727.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 366 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 35/353 (9%), Positives = 112/353 (31%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAGFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + ++++ + Sbjct: 121 APWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ D+ + + + L Y+ +D T + + G ++ Sbjct: 181 DSILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + +A+ + + + + + + +T++ +S R Sbjct: 241 SSGRDWEALPTLSLLKN-------SDLQAQAELQWRLSLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + ++ KS + G L + + ++++ Sbjct: 294 GRFAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPVNAALLFAALIV 345 >gi|94984156|ref|YP_603520.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94554437|gb|ABF44351.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 352 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 98/357 (27%), Gaps = 10/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P L R + L+ + +++ + D + L + + + P Sbjct: 5 PFTLTRSVLREVLRWYAAG-VALFLILQLTDALSTTVGVLLLYHATPLEALSVFGAIAPD 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + + ++ F L SEL A G+S +L+ P V +L+G+ + Sbjct: 64 KLNRSLVLAVPFAVLLTFGRLQGDSELKAMFAAGVSPLRLVWPLAVPFVLVGVLAFVNTG 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G S A ++ Sbjct: 124 YVVPGGLARWDRAWYTIYGTVPPAPSQDNYTFAPPGA----LFYAGRVRNGAESGVAQLD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ + + + + G+ P + D + Sbjct: 180 GVLIERGGETVTAQSGIWDTQARTWTVSDAWITRPGQDPRQVAGPLVFPQT--DTLRPPQ 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A S + +++ + E Q P + L+A V L Sbjct: 238 PPAAQVSTPVLRARLAADEYATPEQRRVDEHQLATRYADPCTPIVFALVAGVVGLLL--- 294 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 A + + Y + T + G L P AA +P I+ ++ + + Sbjct: 295 RNRAGAFAATLLVILVFYVLWTTAPQLARVGALPPTLAAWLPNIVFFLVAAALAWRL 351 >gi|258542097|ref|YP_003187530.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633175|dbj|BAH99150.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636232|dbj|BAI02201.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639287|dbj|BAI05249.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642341|dbj|BAI08296.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645396|dbj|BAI11344.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256648451|dbj|BAI14392.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256651504|dbj|BAI17438.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654495|dbj|BAI20422.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 401 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 121/358 (33%), Gaps = 18/358 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY F L L G L++++ + + + S+ L + +P + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDR-GLSLRVFIELTSLLIPSFV 91 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P T VV++ V+ L EL + +A G+S + L + +++ I L+ I Sbjct: 92 AVVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALARAGLGCALMATIMGFLLNLWI 151 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + ++S+ + I + Sbjct: 152 VPTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQP 211 Query: 184 IDK------KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ ++ D I+Y+ ++ + + ++S L+ + D Sbjct: 212 GNQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDA- 270 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 A S E++ + + + + + + + PL + ++ L Sbjct: 271 --RFRDAAEMSLGELLHP--DPQQVSERDTGKFKVEGWRRLTSPLTCFSFAMVGLVAVLR 326 Query: 298 --FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSG--ILLPV-AAALIPVILTISL 350 FSR + + L I ++++ ++ + AL+P ++ + Sbjct: 327 GAFSRYGNI-KRPLAAVLTVVGLLAINLLLQNLASRNMALIPLIPLVALLPGLICAGI 383 >gi|90408708|ref|ZP_01216857.1| putative permease [Psychromonas sp. CNPT3] gi|90310190|gb|EAS38326.1| putative permease [Psychromonas sp. CNPT3] Length = 365 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 115/356 (32%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K+ L +++ I Q + L +P + Sbjct: 2 ILRRYLMLETFKSQFGILFVLLLIFVSQKFIAILEQAIN-GVIAPDLVLTLLYLNLPTLG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + + L+ SE+V + G S +L ++ S F + Sbjct: 61 TLMLPISFYLAILFAHGRLHSESEMVAMTSCGYSPNSVLKATLLLSFFTFAFASFNSLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A S E I +I++ + + + + S +++ + + Sbjct: 121 APSAENEMIAVIEKAESDAGVATLIEGRFHKSSENGGVVYVEKYHEGQKLERIFASYWPS 180 Query: 184 IDKKNK--IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + K I + + L+ Y + +S+ + ++ Sbjct: 181 DENKAPSVITALHGSVQEKEDGTWLTLEDGQSYTGNVGEHEFDSSRFSSYEVHIANREIR 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ ++ + + + IPL ++ +T +A ++ R Sbjct: 241 SRSRGVSALPTSILLTQTDDKSRAE-------LQWRMAIPLSILLLTFMAVPLAKVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + ++ + + +++ KS + G L P+ + I+ + + + L+ Sbjct: 294 GRYAKLMP-ALALYLTYFLLLSTSKSLIEEGTL-PILSIWGVQIVFLLGGVFLHLK 347 >gi|182413838|ref|YP_001818904.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] gi|177841052|gb|ACB75304.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] Length = 369 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 108/366 (29%), Gaps = 15/366 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 R+ + +L L + L+ V L + + EL + + VP+ + Sbjct: 5 DRHLLREWLAILGLVLCATVGLLLVQVLYDDFRDLRELGARGL-DLWMYLFVTVPMYLAL 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P LV + V L+R +E RA G+S+ ++ P + + + + + Sbjct: 64 VLPLALLVSLMFVLGKLHRANEFTALRAAGVSLLRITAPVWIVGMFACGLSWWLNTTVVP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHIWEDF 179 L + + + ++ + + Sbjct: 124 WSVDESAALRDTMRFRKESNLMPPDRVSAVYSVGFDNPRADRMWFFNRYSKWTQKAYGVT 183 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST-------TLNIPI 232 SI + + ++ + E + + ST Sbjct: 184 VSIMDEHRRELQRIVAEQAWFEAERGWTFRNGRELTFRPDTGELESTVPFTERVEAQFRE 243 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + S ++ + + + +++ L+ L + + IA Sbjct: 244 DPKLMLLIDRKPTDLSLPQLRRLIDYYAIEENPKGTPYAVRYFGLVADTLAPLIVIAIAI 303 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 ++ R I V+ I + Y I + ++ P+ AA +P I ++ Sbjct: 304 PFAVTGVRV-NAAIGVSKSIGLFMLYYIFSNIASALAAKQLVDPMTAAWVPNIGMALVAG 362 Query: 353 LILLQK 358 ++ Sbjct: 363 WFFVRL 368 >gi|167032002|ref|YP_001667233.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] gi|166858490|gb|ABY96897.1| permease YjgP/YjgQ family protein [Pseudomonas putida GB-1] Length = 371 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 111/349 (31%), Gaps = 17/349 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGLTMAPAALVALLVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G +I Q + + + + + + + Sbjct: 121 APLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLAGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + ++ N + L+ Y D + + + Sbjct: 181 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E+ R + + R + + I +P+++ +TL+A +S Sbjct: 241 PKPEVAEEVTEREAIPTSELI-------GKKGLRERAELQWRISLPILVFVVTLLAVPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + I T++ ++ + G L Sbjct: 294 RVNPRQGR-FLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|90580731|ref|ZP_01236534.1| putative permease [Vibrio angustum S14] gi|90437999|gb|EAS63187.1| putative permease [Vibrio angustum S14] Length = 366 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 114/355 (32%), Gaps = 13/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L ++ I + + +P + Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFISILADATD-GSIPSDLILTFMGLSIPSMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A G+ LL + +++ G + + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGMGKKLLLQSALALAVITGAIAAVNSFWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ--QDIFIGAKKILPENHIWEDFTS 181 A ++ L ++ K + N I K + ++ Sbjct: 121 APWSQEHIEQLKEETKAGPTLNMLVKGTFQPAPNGSGVIFIDNITDKGSKLHKVFVAQLK 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLK--KVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T + +I + + + + + L+ Y+ ++ + T N + G ++ Sbjct: 181 ATDTLQPSVIVADNGTVKELSDGRQMLELNDGARYEGVPTQLNYSITHFNDYQALIGQRE 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + + + + + + L + + +I +S Sbjct: 241 VKAGNRDWEAQPTMALIKDQSLAA-------KAELQWRFSLVLCIPLLVMIVVPLSAVNP 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + +A + + I+ KS + GI+ I T+ +++ + Sbjct: 294 RQGRFAK-LAPAVLIYLAYFLAISSAKSAIEDGIIPSAIGMWPINITTLLVALAL 347 >gi|262166531|ref|ZP_06034268.1| predicted permease [Vibrio mimicus VM223] gi|262026247|gb|EEY44915.1| predicted permease [Vibrio mimicus VM223] Length = 366 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/351 (9%), Positives = 110/351 (31%), Gaps = 11/351 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASIAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + L++Q+ + + + +FI + ++++ + Sbjct: 121 SPWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ D+ + + + L Y+ +D T + + G ++ Sbjct: 181 DSILPSVMFSNSGDVKELSDGRQIITLYNGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + +A+ + + + + + + +T++ +S R Sbjct: 241 SSGRDWEALPTLSLLKN-------SDLQAQAELQWRLSLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + I + ++ KS + G L + + ++ Sbjct: 294 GRFAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIVGLWPVNAALLIAAL 343 >gi|162148705|ref|YP_001603166.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545528|ref|YP_002277757.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787282|emb|CAP56876.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209533205|gb|ACI53142.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 377 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 115/364 (31%), Gaps = 8/364 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G+L RY + L + L+ ++ L E + E + + A PL+ Sbjct: 15 GVLTRYLTRELAGRILTAGAILLALMEILALLEQLTPILER-HQGLRGALYFMALHAPLL 73 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + I P L+ ++V+ ++ SE+ I RA G++ L+ + + LG+ L+ + Sbjct: 74 LGSIFPLAVLIGSLVMLVHMTTASEIAILRAAGLTTPALVRLMLPAVLGLGLAATLIDDQ 133 Query: 123 IATSGE---KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + E +L + G + + Sbjct: 134 VTPRAELALARWWNLTDPHPEAGRSFWFRSGTTLVDVGYVAQGGRELGMVDVYGRDGSGR 193 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDG 236 S + V +V+ ++ D Sbjct: 194 LSRVAHLGGAHYANGEWTGTDARGLTVLPSEVIPAPAEPAAEAAGPMRGLGWPAGLRPDD 253 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S + ++ M S T + PL + M L+A V Sbjct: 254 MVRLSMDTPPLAASTMVAMMRDRAPSTQPPAA-LRTALLGRALTPLTFMVMLLLAIPVVY 312 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + + + +G + ++++ G +G L +AA L +++ ++L Sbjct: 313 IPPRSGTRSWLPVWCLGAGLLFVVFQGLLQALGNAGSLPALAATLPGIVIFTFAVSALML 372 Query: 357 QKED 360 + E+ Sbjct: 373 RIEE 376 >gi|257466752|ref|ZP_05631063.1| hypothetical protein FgonA2_04880 [Fusobacterium gonidiaformans ATCC 25563] gi|315917901|ref|ZP_07914141.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691776|gb|EFS28611.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 358 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 107/355 (30%), Gaps = 4/355 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K + + + F++D+ + + S+ A + + VP Sbjct: 1 MKIIDSYILKECRGPIILSVSIFTFI-FLLDIIVAMMENIIVKGISVFDIARILSFYVPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP V ++ F R+SE + +IG+ I +L P + I F + + Sbjct: 60 ILTQTIPLGLFVGIMITFSKFTRSSEAIAMNSIGMDIRAILKPILTLGIASMFFILFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I L + + +M ++ + I Sbjct: 120 SIIPRSYIKLQYLASKIAYENPVFQLKERTFMNNLEGYSLYIDKVERDKHASGILIFEND 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + + S F Sbjct: 180 EKTIFPIVL--VGHQAYWRDSSIILERANFISFDEKGVRKLTGSFEDKRVELQAYFSDLQ 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I + + + + + +P V ++++ +S+ RS Sbjct: 238 IKVKEIEMMSIGTLLREMKGKSKEEKLIYKVEINRKLALPFSSVMLSVLGVLLSIGHQRS 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + GI + F ++ + G + + +P +L +L+ + + Sbjct: 298 GKRA-GILVGILTIFFYICLLNVGIVLANVGKIPILLGVWLPNVLLAALTYRLYI 351 >gi|71891829|ref|YP_277558.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795935|gb|AAZ40686.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 357 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 126/359 (35%), Gaps = 10/359 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y K + +T L + L VI L + ++GE N+S + +P Sbjct: 1 MYNILNYYIVKTVISSTTTVFLVLLSLSSVIKLIDELRKIGE-GNHSFFDVIIYMILSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P TL+ ++ L +E + + G S Q+ + S+ + + +++ Sbjct: 60 KDFELFFPIATLLGGLLGLCMLEVHNEFIAMQISGFSRLQITLSVIKASVPVLLCSIISN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + EKI Q + + I I + + + Sbjct: 120 EWIVPNSEKIMCMYRNQSQHDASLLSIKIKNLWFIDKNDFV----CVENVIAYNELLGVK 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS----TTLNIPIKMDG 236 +++ K+ + A+ + L V E + N + N + Sbjct: 176 LYNFNEERKLKKICYIERAVFVDKVWHLINVNELDISQKTSVVNKNIPHSKWNAELTPYR 235 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S ++ + N+ Y + F+ I+ P+ MT++A + + Sbjct: 236 LSMMITHPNFLSISKLYHCAKYFNRIGQNSKY-YQVIFWKKILSPISGSVMTIMALAFTF 294 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + G +GF+ Y + I + P+ ++ P I+ + +S++I+ Sbjct: 295 GPLYKKKIGIRLFVGSIAGFLFYILNQIFGILSAIHSVSPIIGSISPSIIFLVISVIIM 353 >gi|89075941|ref|ZP_01162316.1| putative permease [Photobacterium sp. SKA34] gi|89048382|gb|EAR53960.1| putative permease [Photobacterium sp. SKA34] Length = 366 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 115/355 (32%), Gaps = 13/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L ++ I + + +P + Sbjct: 2 IIVRYLTRETLKSQLAVLFVLFLVFISQKFISILADATD-GSIPSDLILTFMGLSIPSMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A G+ LL + +I+ G + + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKLLLQSALALAIITGSIAAVNAFWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ--QDIFIGAKKILPENHIWEDFTS 181 A ++ L ++ K + Q N I K + ++ Sbjct: 121 APWSQEHIEQLKEETKAGPTLNMLVKGTFQQAPNGSGVIFIDNITDKGSRLHKVFVAQLK 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLK--KVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T + ++ + + + + + L+ Y+ ++ + T N + G ++ Sbjct: 181 ATDTLQPSVMVADNGTVKELSDGRQMLELNDGARYEGIPTQLNYSITHFNDYQALIGQRE 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + + + + + + + + +I +S Sbjct: 241 VKAGDRDWEAQPTMTLIKDKSLAA-------KAELQWRFSLVFCIPLLVMIVVPLSAVNP 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + +A + + I+ KS + GI+ V I T+ +++ + Sbjct: 294 RQGRFAK-LAPAVLIYLAYFLAISSAKSAIEDGIIPSVIGMWPINITTLLVALAL 347 >gi|262401791|ref|ZP_06078356.1| predicted permease [Vibrio sp. RC586] gi|262351763|gb|EEZ00894.1| predicted permease [Vibrio sp. RC586] Length = 366 Score = 99.0 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/353 (9%), Positives = 111/353 (31%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAGFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + ++++ + Sbjct: 121 APWSQDKEAQLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLHNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ + + + + L Y+ +D T + + G ++ Sbjct: 181 DSVLPSVMFSNSGAVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + +A+ + + + + + + +T++ +S R Sbjct: 241 STGRDWEALPTLSLLKN-------SDLQAQAELQWRLSLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + ++ KS + G L + + ++++ Sbjct: 294 GRFAK-MGPAILIYLTYFLTLSATKSAIEDGSLPVIIGLWPVNAALLFAALIV 345 >gi|257452883|ref|ZP_05618182.1| hypothetical protein F3_07439 [Fusobacterium sp. 3_1_5R] gi|317059425|ref|ZP_07923910.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313685101|gb|EFS21936.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 358 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 106/355 (29%), Gaps = 4/355 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K + + + F++D+ + + S+ A + + VP Sbjct: 1 MKIIDSYILKECRGPIILSVSIFTFI-FLLDIIVAMMENIIVKGISVFDVARILSFYVPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP V ++ F R+SE + +IG+ I +L P + I F + + Sbjct: 60 ILTQTIPLGLFVGIMITFSKFTRSSEAIAMNSIGMDIRAILKPILTLGIASMFFILFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I L + + +M + + I Sbjct: 120 SIIPRSYIKLQYLASKIAYENPVFQLKERTFMNNLEGYSLYIDKVGRDKHASGILIFEND 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + + S F Sbjct: 180 EKTIFPIVL--VGHQAYWRDSSIILERANFISFDEKGVRKLTGSFEDKRVELQAYFSDLQ 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I + + + + + +P V ++++ +S+ RS Sbjct: 238 IKVKEIEMMSIGTLLREMKGKSKEEKLIYKVEINRKLALPFSSVMLSVLGVLLSIGHQRS 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + GI + F ++ + G + + +P +L +L+ + + Sbjct: 298 GKRA-GILVGILTIFFYICLLNVGIVLANVGKIPILLGVWLPNVLLAALTYRLYI 351 >gi|120553894|ref|YP_958245.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] gi|120323743|gb|ABM18058.1| permease YjgP/YjgQ family protein [Marinobacter aquaeolei VT8] Length = 367 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/357 (11%), Positives = 112/357 (31%), Gaps = 14/357 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I++RY + + + L +++ + E + + R P Sbjct: 1 MSIIFRYLIRQIMVSMLAVSGILLLVFMSGRFIKYLADAAE-GEIAAGVLFAIMGYRFPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+P + ++ + + SE+ + A G+S QLL ++G++ + + ++ Sbjct: 60 FLELILPLGLFIGILLAYGRMYLESEMTVLFACGVSEKQLLAKTLLGALPVMLVVGVMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I+ G K + + + + + + ++ + + A Sbjct: 120 YISPWGMKQVEHIFNEQRKATEFEMLAPGRFQDFTSGDRVTYTEALSDDKRQLQGVFIAE 179 Query: 182 ITIDKKNKIIHRKD----ADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 D K + + + + L+ +Q +D N T Sbjct: 180 YDKDGKGVTLITAESGSQFIDEETGSRFLVLEDGGRFQGAPGRLDYNVTEFEAYGLKIVS 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + N ++ I +PL++ +TL+A +S Sbjct: 240 GQEGSKELEEGLSTL--------ALWNSDNPEDRALLHWRISLPLIVPIVTLLAVRLSRV 291 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + ++ + + + L L ++L + + Sbjct: 292 NPRQGR-FFHLLPAMLVYITYLGLLIVARDALADEKVPEWVGMLWVHALFLALGLWL 347 >gi|225619415|ref|YP_002720641.1| Permease [Brachyspira hyodysenteriae WA1] gi|225214234|gb|ACN82968.1| Permease [Brachyspira hyodysenteriae WA1] Length = 356 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 117/356 (32%), Gaps = 6/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K +L LL ++LV + DL+ + E P I+ R P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPEL-INYFITYHLARAPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P + + V + E++ GIS+++ P + I L +F V Sbjct: 60 NTYYIFPVALMFSSTYVLGTFVKNKEMLAIENSGISLFKFSMPMFIIVIGLCLFLVFFWE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A K + G +Q S PW FI + Sbjct: 120 FVAAPLNK--VSFAANDAMRGREQVSKSGPWQLFGGNNHLYFIETYFYKEQYMQNTIIVK 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + D + + K + + + K N P+ + + Sbjct: 178 LDDDGGIQFRVSSPHIQWNNEDRKWYVMDGILTTFSENKEIKVEKVNNYPLDLLERPEHF 237 Query: 242 EQFASRSFYEIIK--KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + K + + ET ++ I + L+A+ S +FS Sbjct: 238 YGRPPLDAMSLSEESHIIKLQKEVNMNTSKLETDLHYRISYCFSGFIIVLLASLFS-KFS 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + I + Y+I+ + +S G++G + AA +P I+ L IL Sbjct: 297 TQSVLVVSLVMVIIVALLYYSILMVFRSMGEAGDINAFIAAWMPNIIFAILCILAF 352 >gi|330720162|gb|EGG98555.1| putative Permease [gamma proteobacterium IMCC2047] Length = 323 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 108/328 (32%), Gaps = 12/328 (3%) Query: 33 LNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISR 92 + + G+ +Y + VP I I P L+ +++ L SEL + R Sbjct: 3 IIDEIK--GKEGDYGTPEVLMYVLMTVPKRIYVITPLAVLIGSLLGLGMLANNSELTVMR 60 Query: 93 AIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 A+G+S+ ++ + ++L +L+ + E + G+ S W Sbjct: 61 AVGMSVARISWAAIKPALLFVAAALLIGEFVVPHSENYAQSQRALAESRGEAVSSKYGYW 120 Query: 153 MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVV 212 + + + K+ A+ AI D LK++ Sbjct: 121 HRGGDTFMHFNAVLPGGVLYGVT------QYEYDDKKLTRSLFAEKAIFQGDHWVLKQIK 174 Query: 213 EYQYGRIPIDKN---STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR 269 ++ + + + + + A S + ++ + R Sbjct: 175 HSYLSDTQVEAGEDLTLRWDTELTPEVLKVVVVDPADLSIMGLHTYTNYLKEQ-ELDAKR 233 Query: 270 AETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG 329 F+ ++ P +V M L+A S RS V GI G + I + Sbjct: 234 YLLAFWKKVLQPFAIVVMVLVALSCIFGPLRSVTMGYRVFAGIILGVVFRYIEDFLGPAS 293 Query: 330 KSGILLPVAAALIPVILTISLSILILLQ 357 PV A+++P+ + + ++L + Sbjct: 294 IVFGFEPVFASIMPIAIFAIAAAVLLKR 321 >gi|332704120|ref|ZP_08424208.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] gi|332554269|gb|EGJ51313.1| permease YjgP/YjgQ family protein [Desulfovibrio africanus str. Walvis Bay] Length = 360 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 124/358 (34%), Gaps = 6/358 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L L + + + DL E + E + V ++PL Sbjct: 1 MSVLSRYLLRQNLYLMSICLCLGIAVYLLSDLFERLDDFLE-AGRGLKIMLVYFLVKIPL 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II QI+P + LV +V + EL+ RA GIS +++ F+V S+ + + Sbjct: 60 IISQILPAVFLVAMLVQLSAMRSNRELLALRAGGISYKAIISFFLVYSLFWSGGQLFISQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDII-PWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + G + + + + I W++ N I ++ Sbjct: 120 YLGVKGLEYSKRIWAEDVRGKEYVTKTIHKLWLREDNDILHIDTVQPASGKGRNLSIYTL 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + I+ K + + + ++ +L K + Sbjct: 180 AQDRRSVVQFINAKTFEAKEGNWVLNDVIIIDPIRFTSEYKPTLKLSLGEAFKSFTLAES 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 A +E+ + + + + T ++ + + M L+A ++ + Sbjct: 240 RNNPAQLPLWELGRAIHQLEVTGS-NVEGLRTIWHGKLSYAFSITIMALLALAII---TF 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + G+ + F+ Y + S G+ G L P+A A + + I + L + Sbjct: 296 EHNVYLNLTAGLVATFLFYGFFVLGSSAGEMGFLPPIAGAWLGNAVFILGATTRLFWR 353 >gi|323492969|ref|ZP_08098107.1| hypothetical protein VIBR0546_19372 [Vibrio brasiliensis LMG 20546] gi|323312800|gb|EGA65926.1| hypothetical protein VIBR0546_19372 [Vibrio brasiliensis LMG 20546] Length = 367 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 110/351 (31%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L ++ L ++ + + S A +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASD-GDIPASLVMHYVALSMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ G+ Sbjct: 61 LLMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGVIAGFNSFVF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + L ++ + + + +FI H++ Sbjct: 121 SPYSQDKLVQLQEEVEAENSVDLLKKGHFQGTPDGSSVVFIDDIDGKQLKHVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + ++ +Y +P + + + Sbjct: 181 DSILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTKFDQYEGLIGQRDVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + RA+ + + I + + + +T++ +S R + Sbjct: 241 RKGRD----WEAIPTLELMKNPD-PRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + I + I+ KS + G + + + +I I Sbjct: 296 FAK-MGPAILIYLAYFLSISATKSALEDGSIPAIIGMWPINAALLLTAIGI 345 >gi|51245020|ref|YP_064904.1| hypothetical protein DP1168 [Desulfotalea psychrophila LSv54] gi|50876057|emb|CAG35897.1| unknown protein [Desulfotalea psychrophila LSv54] Length = 362 Score = 98.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 114/360 (31%), Gaps = 5/360 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + K L G + L +ID E + E +S +P I+ Sbjct: 3 LLNRYLLGQFFKFFLTVAAGFIALYLLIDFFEKFDNFTE-AGKPLSVVIKYFLFSIPAIV 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+ P + L+ ++ LN ++EL +A G+ + ++ P ++G + + + I Sbjct: 62 DQLGPILILLSGVISLGVLNSSNELTALKAGGLPLRAIIRPIIIGGGAVTLLFMASAQWI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 S + D+ + + K ++S Sbjct: 122 LPSTVAVTNDIWIEGVQGKTPVGIVRNNRYYYHGQEGFYSFAWKNNKEYLFANFSYSSWD 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKV----VEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + K + + + LK E + S + P + F+ Sbjct: 182 KEYGLKEMISATSASWDAKQNSWLLKGGVLQQQESRGSYTTTTFTSRKFHFPETPEAFRT 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + RS ++K + + ++ + + + + + Sbjct: 242 PQHAESERSLSALLKGALNNQIAFEAEEAWGLFLGRISYILLGLPLLLLGLPILLLSYQK 301 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 I + F + + ++S +G P AA + + I+L + +L + + Sbjct: 302 WGKDLSIAIPASCTMAFSAWAVWGALQSLAIAGKFSPWLAAFLIHAIFITLGLYLLRRFD 361 >gi|126667525|ref|ZP_01738495.1| predicted Permease [Marinobacter sp. ELB17] gi|126627951|gb|EAZ98578.1| predicted Permease [Marinobacter sp. ELB17] Length = 382 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/355 (10%), Positives = 112/355 (31%), Gaps = 14/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + + + + +++ + E S + A R P + Sbjct: 15 IIFRYLIRQIMISMIAVSTILLMVFMSGRFLKYLGNAAE-GEISAGVLFSVMAYRFPGFL 73 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++ + + SE+ + A G+S +L ++GS+ + + + + Sbjct: 74 ELILPLGLFIGILLAYGRMYLESEMTVLLACGVSEGDILRQTLIGSLPVMLVVAAMSLYV 133 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + G K ++ + + + + + ++ + + Sbjct: 134 SPWGMKQVEEIFNEQRKATEFELLAPGRFQDFTSGGRVTYTEGLSDDKRELQGVFIAEFG 193 Query: 184 IDKKNKIIHRKDADLA----IIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + + I + + + LK Y +D N+T K Sbjct: 194 KNGEGLTIITAETGTQLVDAQTGSRFLILKNGGRYAGNAGQLDYNTTEFEAYGLKIVSGK 253 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + ++ + ++ +P ++ +TL+A +S Sbjct: 254 SGTKELEEGLS--------TGQLMKSNDPQQRALLHWRFSLPFIVPVVTLLAVRLSRVNP 305 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + ++ + + G + L ++L + + Sbjct: 306 RQGR-FFHLLPAMLVYITYLGLLIVARDALADGKVPEWIGMFWVHGLFLALGLWL 359 >gi|329114150|ref|ZP_08242912.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] gi|326696226|gb|EGE47905.1| Hypothetical protein APO_0930 [Acetobacter pomorum DM001] Length = 401 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 122/358 (34%), Gaps = 18/358 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY F L L G L++++ + + + S+ L + +P + Sbjct: 33 TLDRYVFHQLLVALLATTGGLAALIWLMQSLRFVSLVVDR-GLSLRVFIELTSLLIPSFV 91 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P T VV++ V+ L EL + +A G+S + L + +++ I L+ I Sbjct: 92 AVVLPITTFVVSLFVYQRLAGDRELTVMQAAGLSQFALAKAGLGCALMATIMGFLLNLWI 151 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + ++S+ + I + Sbjct: 152 VPTSYHAFRQYEFDIRNKMAAFMLQEGVFTKVSDAMTVYIRSRSHDGTLHGIMVEDDRQP 211 Query: 184 IDK------KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ ++ D I+Y+ ++ + + ++S L+ + D Sbjct: 212 GNQATILANHGSMMIVNDTPRVILYDGSRQVIDHKTGRLNMLVFKQDSMDLSSAHQEDA- 270 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 A S E++ + ++ + + + + + PL + ++ L Sbjct: 271 --RFRDAAEMSLGELLHP--DPQQVSVRDTGKFKVEGWRRLTSPLTCFSFAMVGLVAVLR 326 Query: 298 --FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSG--ILLPV-AAALIPVILTISL 350 FSR + + L I ++++ ++ + AL+P ++ + Sbjct: 327 GAFSRYGNI-KRPLAAVLTVVGLLAINLLLQNLASRNMALIPLIPLVALLPGLICAGI 383 >gi|330504705|ref|YP_004381574.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] gi|328918991|gb|AEB59822.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina NK-01] Length = 374 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 118/361 (32%), Gaps = 15/361 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLFLIMGYRIPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +L + ++++ + + + Sbjct: 61 QLILPLGLFLGFLLAYGRLYLDSEMTVLSATGVSQQRLTAYSMAPALIVALLVGWLSLGL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G ++ + + + S ++++ P+ Sbjct: 121 APQGVASVARILSEQDALTELDTLVPGRF--QSLRDGSRVTYSQELSPDRSELRGVFMSE 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + +++ R I +N + ++ Sbjct: 179 KRFSTDGRSERGITVLVAESGRQEIQD----DGSRYLILENGYRYDGEPGEADYRAIQYD 234 Query: 244 FASRSFYEIIKKMSFSNKSNIF-------HNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S + + R + + + + +PL++ +TL+A +S Sbjct: 235 TYGVLLPKPEVAIEASEREATPTRELLGSSDPRMQAELQWRLSLPLLVFIVTLLAVPLSK 294 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + + IF ++ + G L + +++ +L+L Sbjct: 295 VNPRQGR-FLKLLPAIFLYMAYLGLLIAARGALDKGRLPAALGLWWVHGIFLAIGLLLLY 353 Query: 357 Q 357 Sbjct: 354 W 354 >gi|296125162|ref|YP_003632414.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] gi|296016978|gb|ADG70215.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] Length = 356 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 120/356 (33%), Gaps = 6/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K +L LL ++LV + DL+ + E P I+ R P Sbjct: 1 MKKLNAYLLKEFLSFFFGSLLLFVVLVTIADLSSRLSFYTEHPEL-INYFITYHLARAPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I P + + V + E++ GIS+++ P V I+L + V Sbjct: 60 NTYYIFPVALMFASTYVLGTFVKNKEMLAIENSGISLFKFSMPMFVIVIMLCLILVFFWQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A K + G+KQ S PW FI + Sbjct: 120 FVAAPLNK--VSFAANDAMRGNKQASKSGPWQLFGGNNYLYFIDTYFYQEQYMTNTILLK 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + D K + K +K + + + N P+ + + Sbjct: 178 MNDDGGIKFRISSPYIQWNNDDKKWYVKNGILTTFSENKEIEVKEINNYPLDVLERPEHF 237 Query: 242 EQFASRSFYEIIK--KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + K + R ET ++ I + L+A+ S +FS Sbjct: 238 YGRPLLDSMSLTEEAHIIKLQKEVNMNTSRLETDLHYRISYCFSGFIIVLLASLFS-KFS 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + I + Y+I+ I +S G++G + P AA +P I+ L IL Sbjct: 297 TQSVLVVSLVMVIIVALLYYSILMIFRSMGEAGNMNPFIAAWMPNIIFAILCILAF 352 >gi|82701537|ref|YP_411103.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] gi|82409602|gb|ABB73711.1| permease YjgP/YjgQ [Nitrosospira multiformis ATCC 25196] Length = 354 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 122/358 (34%), Gaps = 10/358 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY L + L +DL + + +G+ YS+ + A +P Sbjct: 3 IIYRYLGLQVLMGLGIATAVLLPLFGFLDLLDQLDDVGK-GTYSVKDAFLYTALLLPRRF 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+ PFI L+ N+ L SEL R G+S + VV I+L +F ++ + Sbjct: 62 IQLAPFIALMGNVTALGRLAVGSELTALRGAGVSPLGISLAPVVVGIILLLFITVLDQFV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A ++ I + + W + + ++L Sbjct: 122 APQFQQKAISSRAAALEKSAALGQQLGIW----TRDERNILRIGEMLHARRAANIEIMHF 177 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID---KNSTTLNIPIKMDGFQKF 240 D + + II +L+ VV + ++ + S +K + Sbjct: 178 DDNGFLLRYTYAKYADIINEGLWELRDVVIKTFNGNAMEIVSRESVPWEPFLKEEDISTL 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ S S E+ + F + E + L +AM L++ R Sbjct: 238 TKSPESLSPAELFLHVHFLRATGQESGA-YELALWRKAGGALTTIAMLLLSIPFVFGSVR 296 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + G +Y I + G L P +AL+P + I+++ L + Sbjct: 297 AG-LGNRLVVASMLGISVYLFDQITANAGLLLHLNPALSALLPGGVLIAVAYFWLRRI 353 >gi|332187157|ref|ZP_08388897.1| hypothetical protein SUS17_2305 [Sphingomonas sp. S17] gi|332012857|gb|EGI54922.1| hypothetical protein SUS17_2305 [Sphingomonas sp. S17] Length = 399 Score = 98.2 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 123/361 (34%), Gaps = 12/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY + L+ A +L+ + + + + IS + A +P Sbjct: 1 MKSIDRYMARLIALPLFATLIIAAMLLVLDRIRRLFEFVATEGG-PISVVWRMLANLLPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP ++ ++ F L +SEL + R +G+S +LL + +I+L + ++ Sbjct: 60 YLGLGIPIGLMLGILLAFRRLATSSELDVMRGVGMSYTRLLRVPYMYAIVLAALNLAIVG 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP-------QQDIFIGAKKILPENH 174 + L + + + + + N +D I + Sbjct: 120 YVQPIARYYYEGLRYELRTGALGASIKVGEFTHLGNRMTLRIEESRDSGRDLSGIFVHAN 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP-IK 233 + ++ + + D ++ I L + +S L I K Sbjct: 180 TSKGDWIGVTAERGRFLATDDPNVIIFRLTNGTLIHNRPEFRAPRVLTFSSHDLPIDLPK 239 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 D F++ + + E+ K + + RAE +F +V + + + L+A S Sbjct: 240 FDNFRQRGGRDLEFTLPELAKLGHEAPSAEARAGSRAEF--HFRLVEVVTMFLLPLLAVS 297 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + RS + V I + + G G + P+ A +P + L Sbjct: 298 LGIPPKRSTS-ALGVFLSIVMLVTYHKVNQYAADIGALGRVDPLIALWVPFAIFAGLVGW 356 Query: 354 I 354 + Sbjct: 357 M 357 >gi|237799873|ref|ZP_04588334.1| hypothetical protein POR16_13645 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022728|gb|EGI02785.1| hypothetical protein POR16_13645 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 375 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 111/362 (30%), Gaps = 17/362 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAISAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFMIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + + SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRMYLESEMTVLAATGMSQQRLLAMTMGPAALVGLVVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI--------GAKKILPENHI 175 A G LI Q + + + + + + + Sbjct: 121 APQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLGGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 S + + ++ + + L+ Y D + Sbjct: 181 MSSDKSKDNGITVLVAEKGHQEVQPNGSRFLILENGYRYDGNPGAADYRVVKYDTYGAAL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + SE+ R + R + + I +PL + +TL+A +S Sbjct: 241 PKPEISEEITDREAIPTSE-------LFGSSTPRNVAELQWRISLPLSVFIVTLMAIPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + + I I+ ++S + G L + + + +++ Sbjct: 294 RVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLCIGLVLF 352 Query: 356 LQ 357 Sbjct: 353 YW 354 >gi|254477380|ref|ZP_05090766.1| permease YjgP/YjgQ [Ruegeria sp. R11] gi|214031623|gb|EEB72458.1| permease YjgP/YjgQ [Ruegeria sp. R11] Length = 388 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 121/358 (33%), Gaps = 13/358 (3%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY YL +F L + + ++ + +++ S A +P +I+ Sbjct: 5 DRYVLSQYLLFFGFFALILVAVFWINRAVVLFDRLIG-DGQSALVFFEFTALSLPNLIRM 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P ++ V LN SEL + RA G S WQ+ P + I+ I ++ + + Sbjct: 64 VLPVAAFASSVWVTNRLNSESELTVLRATGTSPWQMAKPALAFGIITAIMMSILTHFLLP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGA------KKILPENHIWEDF 179 + + N + ++ + + + D Sbjct: 124 TSIATLEQRETEISRNVTAKLLSEGDFLHPTRGVTFYIGRIDPDGTLNDVFLSDRRNPDQ 183 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 K ++ +D ++ + + + + + + +I + ++ Sbjct: 184 VVTYTGGKAYLVRDEDRTHLVMVDGMSQRIDMQTRRL--SSTIFSDFSYDISSLANKAEE 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--E 297 + + E+++ + + + + L+ VA+ LI S + Sbjct: 242 KTRNIRAIPSLELLQDRARLIAEGPYSAGALAEELHLRFARALVCVAVALIGFSALMVGG 301 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 FSR R + + F+ + + ++ + P+ +P + ++ +++ L Sbjct: 302 FSRFGVWRQALVAFVLLIFVEGLRGVVSEPVLENADMWPLI--YLPTAVGLAAALIFL 357 >gi|320451335|ref|YP_004203431.1| hypothetical protein TSC_c22800 [Thermus scotoductus SA-01] gi|320151504|gb|ADW22882.1| hypothetical membrane spanning protein [Thermus scotoductus SA-01] Length = 347 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 101/346 (29%), Gaps = 12/346 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + L L ++L + E+ + + R P Sbjct: 1 MKTLDRYLLREVLAHFSLGLAVIVLLFLAGAVYEVLAPLVAK-GADPYTLLLYLFYRTPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P L + + L SEL A+GI ++L P + LL + L+ Sbjct: 60 ALVRGAPVAYLFALLFLLSRLGEDSELKALLALGIRRERVLLPLLGLGALLALLGFLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G DL+++ + Q + + + Sbjct: 120 SLVPKALAQGQDLLRRQVLERPRALLTPGTTFQDARGRVVYVGEVARDRIGKLRILSQEE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + + ++ + T Sbjct: 180 VVLAEEGRFQGGVLQVEKGLRVTYEGDRPRTLTRFQEGELVLRDLTFEPWQNPA------ 233 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + E+ +++ KS + T +Y P + L A ++ Sbjct: 234 ---NRMTLKELKEEVERLRKSGVKAGLE-ATTYYRRYAEPAASLVFALFATGLAFYLLGG 289 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 ++ +V + + F Y ++ + G+ L P+ AA P + Sbjct: 290 SRSLGLVGVAVLTFF-YYATWSVGRIMGEQNALDPILAAWGPNLFY 334 >gi|261253953|ref|ZP_05946526.1| predicted permease [Vibrio orientalis CIP 102891] gi|260937344|gb|EEX93333.1| predicted permease [Vibrio orientalis CIP 102891] Length = 368 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 113/353 (32%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L ++ L ++ + + S A +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASD-GDIPASLVMHYVALSMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ G+ Sbjct: 61 LLMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGLIAGFNSFYF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + + L ++ + + + +FI H++ Sbjct: 121 APYSQDKLVQLQEEVEAENSVDLLKKGQFQGTPDGSSVVFIDDIDGKQLKHVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + + ++ Y+ +D T + + G + Sbjct: 181 DSILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTEFDQYEGLIGQRDVQ 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + M + RA+ + + I + + + +T++ +S R Sbjct: 241 RKGRDWEALPTMDLMKN-------PDPRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + I+ KS + G + + + ++ I Sbjct: 294 GRFAK-MGPAILIYLAYFLSISATKSALEDGTIPTMVGMWPINAALLLTALGI 345 >gi|317153285|ref|YP_004121333.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943536|gb|ADU62587.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] Length = 388 Score = 97.8 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 130/364 (35%), Gaps = 12/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L R FK LK + + L+ + + + N L P Sbjct: 1 MKLLHRQIFKELLKLFGLTVACLLGLILIGRML-QLRSLFLSQNIGFFNILQLFFYLTPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I P T++ + F ++ +EL +A G+S++++L + +L +FT + Sbjct: 60 FLLLITPIATMLSVFLTFLRMSTDNELTALKANGVSLYRMLPAPIAFCVLCTLFTFFISM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK-------ILPENH 174 G + + Q+ + + + + + + Sbjct: 120 WGLAWGMDMFKTSLYQFARSHSRFALQPGVFNKEFPGITFYAHQVDNDTGELKFVFVRDQ 179 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + + + + +I+ I +K ++ + + S L++ + Sbjct: 180 SISGASVVVVAPEARIVSSPKTAEVHIVFNKGRIYRQSGEDINILRFGSYSVRLDLGKLL 239 Query: 235 DGFQKFSEQFASRSFYEII---KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 F E+ +F + S + + + +T++Y + +PL + + + A Sbjct: 240 GDFSFSEEKAKDMTFAALREIRNDPSIAPQQTAQFLRKVDTEYYKRLTLPLGCLILGMFA 299 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 ++ F R + + + + + Y++ ++ S G++G + PV P IL + ++ Sbjct: 300 IPIAYVF-RGLRQQYGLLLSMGLFLLYYSMFSLSVSLGEAGAIAPVYGLWAPNILYVLVA 358 Query: 352 ILIL 355 + + Sbjct: 359 VFGI 362 >gi|58038773|ref|YP_190737.1| hypothetical protein GOX0298 [Gluconobacter oxydans 621H] gi|58001187|gb|AAW60081.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 390 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 107/359 (29%), Gaps = 12/359 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + L L GA L+++ + + + S+ L + +P I Sbjct: 15 LLDRYILRQLLIALLALTGGATALIWLTQSLHFVSMVVQ-HGLSLRVFIQLTSLMLPSFI 73 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P T +V + + + EL + RA G S +L P ++ + + ++ + Sbjct: 74 AVILPITTFLVVLFTYQRMVGDRELTVMRAAGRSPLELARPGLLCAFFSVVLCYVLTLWL 133 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A Q ++ + +SN G + + + Sbjct: 134 APVSYHAFHRYEFQIRNRMAAFLLQDGVFTSLSNDMTVYVRGRTSDGQLHGVLVEDDRDP 193 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDGFQK 239 + R + +V L + R N T Sbjct: 194 DSHTTILAERGTMVVVNDQP-RVVLYDGSREEIDRHTGRLNVLTFGRNTIDLTSSRQHNH 252 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE-- 297 S E+ ++ + + + + PL ++ +I L Sbjct: 253 EDRDPDEMSLRELFHP--DPHEVSERDRGKNIVVGWRRLTSPLTALSFAMIGLVTVLRGA 310 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 FSR + I + L I ++++ L V + IL + +L Sbjct: 311 FSRHGNITRPL-IAILTVVGLLAISLMLQNLAGR-HLALVPLIWLEAILPAVVCAAMLF 367 >gi|296283030|ref|ZP_06861028.1| permease [Citromicrobium bathyomarinum JL354] Length = 407 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 120/356 (33%), Gaps = 9/356 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY F+ + + A L+ + + ++ + + + T +P Sbjct: 7 LDRYIFRLTIVPMIGVFALAATLLMLEQMLKLFRFVSTEGG-PVGVVFQMLGTLLPDYAV 65 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IP L+ + F L +SEL + RA+G+ +LL ++ L ++ + Sbjct: 66 LAIPLGLLLGTLFAFRQLALSSELDVMRAVGLGYGRLLRVPFAITLALMAVNAAIVFYVQ 125 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + +L + + + +++ ++ + + Sbjct: 126 PVSKYYYEELQFDLRSGALGASIKVGEFTTLADRMALRIEESEDSGRKLKGIFARINAED 185 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK-----MDGFQK 239 + I R+ L+ N + ++ + + P + L+ + ++ Sbjct: 186 GQTLSISAREGRFLSTSDNPDTIILRLSDGTIVQDPPGETPRVLSFTEHDLPIDLPAIEQ 245 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYR--AETQFYFLIVIPLMLVAMTLIAASVSLE 297 F + + Y + + + R ++ F + +V M++ M L+A ++++ Sbjct: 246 FRARGEAEREYILPELLRMGWSDTTTEAQRLGSQASFNYRMVELAMMLFMPLLAVALAIP 305 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 RS + V + + + M+ F G + P P + L + Sbjct: 306 PKRSTS-ALGVFVAVILVVAYHKVNQYMQDFAALGRVDPTLGLWGPFAIFAGLILW 360 >gi|218778207|ref|YP_002429525.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] gi|218759591|gb|ACL02057.1| permease YjgP/YjgQ family protein [Desulfatibacillum alkenivorans AK-01] Length = 398 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 123/364 (33%), Gaps = 13/364 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+++Y L LL ++ + + ++ + + + +L +P + Sbjct: 6 IVFKYMLGEMLPPFGVTLLVFALIFLMTRMLQLTDYVVNFR-VGLGHVMMLLMYSMPFFL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IP T++ ++ F ++ +E+ +A G S++ LL P + + T + Sbjct: 65 IFVIPMSTMMAVLLTFLRMSSDNEITALKAAGWSLYSLLPPVLAFCTAAALLTASMSFIG 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI---------FIGAKKILPENH 174 G +L+ + + + + I Sbjct: 125 LPWGRMAAKELLIDVARQNVEIGLKERSFERTFKNVVLYVGSVDVESRTLHHVFIEDRRD 184 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 T + + D + + + + + D LN+ + Sbjct: 185 KQLSSTIMASTGRIIPSDGDDIWQLRLNDGVIVRADRKKSSMFTVNFDSYDFNLNLGTAL 244 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + F E++ + NK + + A + + IP + + L A + Sbjct: 245 GA-RDGEKDEEEMYFKELLTFVKRYNKKDDRYYL-ALLEVHKKFSIPFSCIVLGLAAVPL 302 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + SRS + VA G+ + Y +++ FG++G P+ +P ++ ++ Sbjct: 303 GIV-SRSARRSFGVALGLGLFLLYYLLLSAGWVFGEAGKYPPMIGMWVPNLVIGAMGGFS 361 Query: 355 LLQK 358 L++ Sbjct: 362 LVRM 365 >gi|330813915|ref|YP_004358154.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487010|gb|AEA81415.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] Length = 375 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 140/364 (38%), Gaps = 12/364 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP-NYSISRGAVLAATRVPLIIQQI 66 YF K ++ + L L L +I+ + + I +L + P I ++ Sbjct: 12 YFSKEFIFSLLLVFLVFFSLSLLINSVGELIYLKDKKLENVIWMATILTLAKTPTTIIEL 71 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 FI L I+ F + + +E+ GIS + + S + G+F + + I+++ Sbjct: 72 SIFIFLFSGILFFVKIQKNNEVNTMLLAGISKTLPILIPSIISFICGLFIIFFLTSISSA 131 Query: 127 GEKIGIDLIQQWK-DNGDKQKSDIIPWMQISNPQQDIFIGAKKIL-PENHIWEDFTSITI 184 + + ++ + + W + I A KI +I + T + Sbjct: 132 SLNFYEQEKRIYSSNDNLIVMNKMGLWFMENTTSGYNIIRADKIEKNNFNILNNVTIYNL 191 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN--------STTLNIPIKMDG 236 D+ + R D++ I + L K Q + D + + I ++ Sbjct: 192 DQGFNFVKRYDSEKITINQKRWSLNKTQVTQEKKSLSDSKKDNDASLVEMSFDSSININD 251 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + SF+E+ K + N + +F+ + +P L AM L++ + ++ Sbjct: 252 LKNYFTDVNTVSFWEMFKTIKTLNSRG-YSAEELRVKFHKYLSLPFYLFAMILVSTTFTM 310 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ + + +G G +Y + + SFG S L + PV L I LS + L+ Sbjct: 311 GANKQYNTFMYLFFGTILGVCIYFLNDLSISFGLSNKLPLAISVWSPVGLIIILSTINLI 370 Query: 357 QKED 360 + + Sbjct: 371 RINE 374 >gi|297172254|gb|ADI23232.1| predicted permeases [uncultured nuHF2 cluster bacterium HF0770_13K08] Length = 351 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 125/360 (34%), Gaps = 18/360 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + FL +++ V + + S + A +PL Sbjct: 3 FKIISKYIASEFNRYFMLFLGAFVLMSLVGNFFGNLADVFTDW-QSFLKFLQETALLLPL 61 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++ IIP L+ I + +LN+ +EL+ R+ GI W+L P + S L+ F N Sbjct: 62 LLELIIPITVLLATIATYSSLNKNAELLAIRSSGIGGWRLAFPVLAVSALIASFAYFSQN 121 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI----WE 177 + T + + + + + N Q + I + I Sbjct: 122 YMYTWMHQTWVKQENSARLPPLWKVGEEQSIYYFGNRQHNGRISSITSFNWKQIPFQLLG 181 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 +++N D I ++ ++L+ V +++ + + I Sbjct: 182 RTAIERGEQQNNSWIFHDIQKYIFQDENLRLEHVEQWRIETEKLPTVPFDIPISPHHQPL 241 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 E +S R + P + M LI +S Sbjct: 242 LDLYENTLKL-------------QSEGQDVTRYWVAIFQKTAYPFQIFIMVLIGLGLSAS 288 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++R +A G + + + I + G +G++ P AA I+ ++L++ +L Sbjct: 289 YNRRGMAAESLAISCLLGILFWILNQITMAVGGAGLIFPFFAAWSGNIIFLALALWLLSY 348 >gi|56461047|ref|YP_156328.1| permease [Idiomarina loihiensis L2TR] gi|56180057|gb|AAV82779.1| Predicted permease [Idiomarina loihiensis L2TR] Length = 363 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 113/349 (32%), Gaps = 12/349 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 LK+ L L M + + + E + + L + +P ++ I+P Sbjct: 1 MISETLKSQLAVLFILMTIFVSQKFVRVLSDASE-GDIPGAIIFQLLSLNLPALLSLILP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++ + +E+ + A G+S W + +V S++L I T + Sbjct: 60 LSLFLGILLAHGRIYADNEMTVLHACGVSEWYVTRVTLVLSLILAIITASFTLWLVPWSL 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQ---ISNPQQDIFIGAKKILPENHIWEDFTSITID 185 L + + + Q +G + L E + + + Sbjct: 120 DQEQKLEDKARSESGLTALMPGRFQQASNQKAVIFVQRVGDEGDLEEVFVAQHTHNQGEL 179 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + ++ K + L+ +Y + + Q+ SEQ Sbjct: 180 QSGSVVMAKTGKVISETTGSQWLELGQGKRYAGDDDSYQMMSFDSYQLQIKEQQASEQLR 239 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 Y ++ +S + I + I IPL + +TLIA +S R + Sbjct: 240 KLEAYPTVELLSRKEPAAIAE-------LQWRIAIPLAMPLLTLIAVPLSRVNPRQGKFG 292 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +A + + ++ KS + G++ P+ + + + + Sbjct: 293 -RMAPALLIYLGYFLLLMAAKSAIRDGVIPPIIGLWWIHFILLIFGLAL 340 >gi|320335464|ref|YP_004172175.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319756753|gb|ADV68510.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 379 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 46/382 (12%), Positives = 103/382 (26%), Gaps = 33/382 (8%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L L ++ L N +VP + Sbjct: 2 ILTRYVTRELLPPLLAGTALFTAILSFGYFF---VSSQWLKNVPPGLILQWIGAQVPDTL 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +++P +++ +V F L EL+ ++ GIS+ ++ P V + L+ + V + + Sbjct: 59 VKVLPMGVVLMVVVAFGRLATERELIAVQSGGISLGRVARPATVIAALVAVLAVWLSLWV 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A L G + + Sbjct: 119 APRLNVEARGLYWDTLTGGGLTTLSGRTTDLGGGLTLYLGGYDSATRRMTGVRVQQWDKD 178 Query: 184 I-------------DKKNKIIHRKDADLAIIYNDKVKLKKV-------------VEYQYG 217 + N++ R A + + L+ V V Sbjct: 179 NAELGTLVFARDGTFENNQLQLRDYAVYRVNFAAVRDLEAVSDDPSKLRSAIGDVFTAVN 238 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA--ETQFY 275 P + TL+ + + ++ + R Sbjct: 239 TPPNKDATLTLDTGLSRKETLARYADAIGADSEGWPQLITKLTAPGVKAADRQAARVDLN 298 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + +P+ + + L A +L + R + + Y + + + L Sbjct: 299 RKLALPIGNLVLVLAALPFALRYGR--TLGTSLGIALLIAVAYYLLFFVGIAVANMLPAL 356 Query: 336 PVAAALIPVILTISLSILILLQ 357 P + ++ +L + +L + Sbjct: 357 PELGVWLANLVFAALGLTLLRR 378 >gi|149196258|ref|ZP_01873313.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] gi|149140519|gb|EDM28917.1| permease YjgP/YjgQ [Lentisphaera araneosa HTCC2155] Length = 358 Score = 97.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 123/357 (34%), Gaps = 15/357 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L + + G + + F+ ++ + + M +L N + +P Sbjct: 5 ILSRYIMRSMLLPFVCCICGFIFIFFIANVQDDLSDMLKLDNT--KDIIIYYFLLIPDKF 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I P L+ I F +LNR E++ R+ G+S+ + + I L V + + Sbjct: 63 TYIAPMSLLLATIYCFSSLNRNHEVIAMRSAGLSLTK-----LSAPIYLFSVLVGISLYL 117 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ + L + + + + E++ + + Sbjct: 118 SSQYLEPYCRLKTFELNTRAESMDRSHEFHIFTAFDGKQKRKWAVSSDEDNNFSAIQILE 177 Query: 184 IDKKNKIIHRKDADLAIIYNDK-VKLKKVVEYQYGRIPIDK------NSTTLNIPIKMDG 236 D+ N + +A ++ K V ++ K N +I Sbjct: 178 YDENNNLTREIEALSGEFNSEIGWNFKNVSIAEFSEDHRIKKIEKHDNYLRNDIKDDPII 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 E + S +I +++ + ET+ Y LI P + L+ ++ Sbjct: 238 LSNIDELKGTPSIAQIKSELNSGRPVDTKRKAFLETRQYSLIFSPFSCLIGVLLGIPLAT 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 RS + I + Y I + + G++ IL P+ AA I + IS + Sbjct: 298 SSQRSPGMSAA-SRAIGIMLVYYIINSAFTNLGRNDILPPMMAAGIGTFIFISFGLF 353 >gi|331007487|ref|ZP_08330658.1| putative permease [gamma proteobacterium IMCC1989] gi|330418711|gb|EGG93206.1| putative permease [gamma proteobacterium IMCC1989] Length = 408 Score = 97.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 109/354 (30%), Gaps = 3/354 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I+ RY K L+TT +I++ + + + R+P Sbjct: 28 PMIIPRYLTKEVLQTTFAVTSVLLIIIMSGRFVKYLAEAA-AGKIDARVLFAVMFYRLPG 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+P V ++ + L SE+ + + G+S QL+ + + ++ I + Sbjct: 87 FMELILPLGFFVSILLAYGRLYTDSEMTVLFSCGVSRKQLIAWTYIPAGIVLIIIATLSL 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G ++ Q + D + + N + E + Sbjct: 147 WLTPLGLHEAEKILAQQQARNDFETMQEARFQVSRNKSLVSYTEDISDNREQLNAFFLAN 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + + +V + R + I + Q Sbjct: 207 MNVGADEPLMTVRSEVAEYKILGETDQRYLVLKRGARYEGQPGTANYRITEFEEFGQHVD 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + ++ + + + PL+++ +TL+ S R Sbjct: 267 PKGEIAVTNNKVNRLPTVELLGS-DLPDYQAALQWRLSSPLVVLIVTLLGVLFSHTNPRR 325 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + ++ I + ++ + + L + L+I +L Sbjct: 326 GRYA-MLFPAILLYLIYLVLLNSARGAVEEQRLSSAIGLWGVHFMFFVLTISLL 378 >gi|312959168|ref|ZP_07773687.1| permease YjgP/YjgQ [Pseudomonas fluorescens WH6] gi|311286938|gb|EFQ65500.1| permease YjgP/YjgQ [Pseudomonas fluorescens WH6] Length = 372 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 117/356 (32%), Gaps = 6/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAAS-GALDPGSLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL ++ + + + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALVMAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G L+ + + + + + + + + Sbjct: 121 APQGAMQFQLLLNKQDAMTEFDTLEPGRF--QALNDGTRVTYTETMTDDRANLGGVFISQ 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ R + L + Y + + + + + Sbjct: 179 KNQGENQKDRGISILVADSGRQEVRPDGSRYLVLENGYRYDGSPGLADYRAIKYDTYGVM 238 Query: 244 FASRSFYEIIKKMSFSNKSNIF--HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A E + +++F R+ + + I +PL++ +TL+A +S R Sbjct: 239 LARPDISEEVTDRDALPTASLFGSQELRSIAELQWRISLPLLVFIVTLMAVPLSRVNPRQ 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + I T++T + + ++G V + +++ + +L Sbjct: 299 GR-FLKLLPAILLYMTYLTLLTYARGWLENGKTPLVLGLWWVHAIFLTVGLALLYW 353 >gi|217966587|ref|YP_002352093.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] gi|217335686|gb|ACK41479.1| permease YjgP/YjgQ family protein [Dictyoglomus turgidum DSM 6724] Length = 364 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 121/361 (33%), Gaps = 11/361 (3%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 +Y F L + G + LV +I + + + S L ++P + Sbjct: 6 KTYHKYIFSEILGPFFLGIFGFI-LVMLIQILYEFSDFIIMRRVSFEVVLKLLYYKIPSL 64 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 +IP L I F L R E+ R+ GI L ++ SILL + Sbjct: 65 FVFVIPVSLLFAIIFSFGRLMRDGEIFAMRSSGIYFLSLTLTPLLFSILLSLILWFFTYS 124 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + LIQ++ + ++ + KKI+ ++ ++ Sbjct: 125 LIPESNYRSNRLIQKYFFLNPAPIKGENVFFHD---EEGRYYYVKKIIENRNVMQNVLVF 181 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDGF 237 NK A+ AI D + LK V + G +N+P Sbjct: 182 DTSSSNKYPIIYTAEEAIWNRDSLILKNGVVHHLGDDSFVVWEGKFEEFKINLPQDFMYI 241 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 E+ K+++ K+ I + Y I + + L+ SV L Sbjct: 242 FYRDRTPQEMPTNELKKRINVYKKAGI-SARSYLVEDYLRIAQSIAVPIFALMGFSVILL 300 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + I F Y I +SFG+ + P +A +P I SLS+ + + Sbjct: 301 TGRGGRLWGTAF-SIIIAFFYYGFNIIARSFGEYAVFSPFLSAWLPNITLGSLSLGVFIW 359 Query: 358 K 358 K Sbjct: 360 K 360 >gi|94987323|ref|YP_595256.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731572|emb|CAJ54935.1| predicted permeases [Lawsonia intracellularis PHE/MN1-00] Length = 366 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 73/358 (20%), Positives = 146/358 (40%), Gaps = 11/358 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L+RY K K L L + + + DL E + E + S + P Sbjct: 1 MSLLFRYLIKNNTKILLLTLTIGIGVYILTDLFERLDNFIE-AHTSTKIILTYFIYKTPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I QI+PFI L+ ++ + + EL+ +A GIS ++ + ++ S+ G + Sbjct: 60 AIAQILPFIFLISTVIQLCIMAKKKELIALQAGGISFTRIASIIIIASLFWGTIQFIFSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I T+ + + + Q++ N Q I ++ + + P++ Sbjct: 120 YIGTACGRKSLQIWQEYVHN---QHKSKTILKDIWFTDKNWIVSINTLKPDDTGSGFSAY 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 + I A I+N++ LKKV + Y + + + + T N + F Sbjct: 177 LLDKNGLTIEKIIWALSFSIHNNEWILKKVAVSEPALYSQEMLQELTLTFNQSSETLKFI 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + SF+E+ + + +S + +T ++ + LV M L+A ++ Sbjct: 237 QNNNAPQQLSFWELRETIHKLERSGS-NVELLKTSWHTKLSYSFSLVVMALLATTIV--- 292 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + N I +A+ + F+ + TI S G GI+ P+ A I ++ +S++I L Sbjct: 293 AWKNNIYIAIAFSLLYTFIYNALNTIGISLGNKGIISPIIGAWIANLVIMSVTIWKLF 350 >gi|281356604|ref|ZP_06243095.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] gi|281316731|gb|EFB00754.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] Length = 419 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 50/419 (11%), Positives = 107/419 (25%), Gaps = 65/419 (15%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L Y + +L LL +IL + D+ + E S ++P Sbjct: 1 MPK-LDGYILREFLIKYSVLLLVFVILFILSDVYRDISDFLEAK-ASYRSILQYLGYKLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P L+ + + E+ RA G+S+++ V +++ + Sbjct: 59 GNVRFILPISMLLGCMWTMATFGKNMEITAMRASGVSLFRCGGSIFVVGLIVTAVNIYFN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + E+ ++ + D ++ + +N + F Sbjct: 119 EALVPYTERRAEEIRSEVADGRKYVQNLLTYRSTDQQRHWLFKTFTTDEAQQNVTVKTFW 178 Query: 181 SITIDKKNKI-------------------------------------------IHRKDAD 197 + + + + Sbjct: 179 TDGMIDDIVLGAGDAEFDALIRQMFRLKADRILALSREERAKEIRKELKGRKVDFFANRV 238 Query: 198 LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM- 256 Y R K + D S F + E + Sbjct: 239 SYDAGKKAWTFSDGNFTSYDRNDETKFEASRGTSTMHDPQPYKSIVFNEKEIPEAPDDIM 298 Query: 257 ------------------SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ T FY+ + P + ++ + Sbjct: 299 NSIKEKDDLPTLVIWDLVRRNDNMPDRVYSIYMTVFYYRLAFPWACFLAVFLGIPLATKN 358 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ + + + + + + GK GIL PV A L P + I +L Sbjct: 359 ERTGSL-MAIITAVGIIIVYIVVAQVFLVLGKGGILNPVFAGLAPTLAFIGCGAYRILH 416 >gi|83644756|ref|YP_433191.1| permease [Hahella chejuensis KCTC 2396] gi|83632799|gb|ABC28766.1| predicted Permease [Hahella chejuensis KCTC 2396] Length = 365 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 37/353 (10%), Positives = 117/353 (33%), Gaps = 5/353 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + L + L +++ + + S + R+P + Sbjct: 3 IILRYLSRQLLVSMLAVAGVLLLIFMSGRFIKYLADAAQ-GKLSADVLFAIMGYRLPGFL 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++ + + SE+ + A G++ +QL+ +V ++L+ + + + Sbjct: 62 ELILPLGLFIGILLAYGRMYLESEMTVLFACGMNRFQLIKLTMVSALLVMLVVGAMSLYV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + G + ++ + + + S + + + + ++ Sbjct: 122 SPWGLRQVDEIFSDQSKITEFELLAPGRF--QSLRSGERVTYTEGLSSDKREMQNVFIAE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D ++ I A D + V G + I+ D + + Sbjct: 180 RDSESGSISVLAAKRGTQLVDPSTGSRFVVLHEGARYQGRPGEMDYRVIEYDAYGIKIAE 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + +++ N + + I IPL++ + L+A +S R + Sbjct: 240 PDA-EAEKTRDEAKPTSELWRSDNPKDRALLQWRISIPLLVPIVALLAIPLSRVNPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + ++ + + + ++++++++ Sbjct: 299 -FFHLLPAMLIYITYLGLLIASRKSLEKERISEWIGMWWVHGTFLAIALVLMF 350 >gi|297565136|ref|YP_003684108.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296849585|gb|ADH62600.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 346 Score = 97.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 118/352 (33%), Gaps = 15/352 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY ++ L L ++ L E+ + + A A RVP + Sbjct: 4 LDRYLWREVGAAVLGGLAVIVLAFIGGYLYEVLAPLLQR-GADPWVVAQYLAFRVPDALV 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + +P L ++V + SEL A GIS ++L P ++ + +L I VL+ IA Sbjct: 63 RGLPIAMLFALLLVLSRMGEESELKAFLAGGISPLRVLFPLLLLAAVLFISGVLIGESIA 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + G L++Q + + + A + I + Sbjct: 123 PKATQSGQSLLRQAVFQKPRALLAPGSTFTDAYGRILYVGQADEGGIGGVRVITAEEILL 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFSEQ 243 ++ ++ L+ Y ++ Q Sbjct: 183 SERAHF-----------EGGQLVLEGGSRVTYAGSRPRTVARFERGTVPLVELAQDAPGG 231 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + E+ ++ +S + ++ T +Y P A T+ A +S F Sbjct: 232 LSALTLAELHSRIRQYRQSGLPYHAE-LTAYYRKWAEPAAAFAFTVFAVGLSF-FLLGGS 289 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + F Y ++ + G++G L P+ AA P L ++L Sbjct: 290 RNLGMVGVVVLTFFYYATWSVGRIMGEAGALPPLLAAWGPGTLYAVAGAVLL 341 >gi|119503287|ref|ZP_01625371.1| predicted Permease [marine gamma proteobacterium HTCC2080] gi|119460933|gb|EAW42024.1| predicted Permease [marine gamma proteobacterium HTCC2080] Length = 363 Score = 96.7 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 112/353 (31%), Gaps = 7/353 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 ++ Y + + TL ++VF + + + + S + ++P + Sbjct: 3 IFLYLTRDVVTHTLAVAFVLFLVVFSGRFIKYLAEAA-VGSLSADVLLPVMLFKLPSFFE 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I+P + ++ + SE+V+ +A GIS +L +V + + + + Sbjct: 62 LILPLALFIAVLLSLGRMYAESEMVVLKACGISPSRLAVFLLVPGLFIMCLVAGLTMYLG 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G L+ ++ Q + + + H + Sbjct: 122 PEGSARAQRLLDNPRNAEGLQLMAAGRFKSQRGGELVTYTERIDKAGVMHNVFVVEEQSG 181 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 ++ ++A++ + ++ +++ ++ Sbjct: 182 TDATQVTLAQEAEIITDSATNRRYLELRGGTRYSGVPGESAYEAVAFKRLGELIPEERDS 241 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S + S N R ++ I +P ++ +IA ++S +R + Sbjct: 242 LRASTRIDATPTADLLSS---DNPRKRATLWWRISLPFLVPVSVVIALALSKTDARRGRY 298 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + +T +S +SG A L ++ +++ +L Sbjct: 299 A-RLGPALALFLTYFLALTQARSLMESGSGPG--AMLATHLMFSLVALFLLYW 348 >gi|307543948|ref|YP_003896427.1| permease [Halomonas elongata DSM 2581] gi|307215972|emb|CBV41242.1| K07091 [Halomonas elongata DSM 2581] Length = 361 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 104/354 (29%), Gaps = 2/354 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L+T ++++ + E + L +P + Sbjct: 2 IIFRYLTREILQTMAAVAGVLLLVIMGSRFIRYFSNAAE-GEIPVDILGTLMLFHLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++ L SE+ + A G S +LL ++ + ++ I L + Sbjct: 61 ELILPLAFFLGILLALGQLYLNSEITVLVACGTSPNRLLWVSLLPATVVAILVGLCSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +G ++ + D + + + Sbjct: 121 TPAGALQNEIILDEQSSQLDFGVLAPGRFQNFGGGRVAYTEALSEQERRLEGVFISERQR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D A D+ + + G + + + + + Sbjct: 181 RDDGTPQTVVTRAAEGYQTIDEETGSRFLVLSDGERYSVEPGRAVAEHLSFGTYAVRLSR 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A+ + + + + A Q + + +P M+ +TL+A +S R + Sbjct: 241 AAAERDDLDDPEYATTPALFADGSAPAMAQLQWRLGLPPMVFILTLLAMPLSRVNPRQGR 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + IF +++ G + + +L+ L+ Sbjct: 301 FAK-LLPAIFLYVAYLSLLLAALDAIARGAWPTTLGMWPIHAAFLVIGLLMTLR 353 >gi|237740743|ref|ZP_04571224.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229422760|gb|EEO37807.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 359 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 109/350 (31%), Gaps = 3/350 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF V + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGAAIFIVFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + Q I++ + + F Sbjct: 120 SIIPRSFIKLKYVGTKIAYENPVFQLKEKTFI-DNLDQYSIYVDKVESDGKAKNIIAFEK 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + + +K + + + + + F+ + Sbjct: 179 PQDKTKFPMVLTGEEAFWKDNSIVLKQSQFISFDENGKKNLTGTFDEKRVVLTPYFENLN 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I + K + + + + + + + V + +I +SL R Sbjct: 239 LKIKDVEALSITDLIKNIRKVDAEEVLKYKIEIFRKLALIFSTVPLAVIGFCLSLGHHRI 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 ++ + F + I +G L P A P +L L Sbjct: 299 SKK-YSFVLAMIIIFAYIIFLNIGIVMASAGKLHPFIATWTPNVLLYILG 347 >gi|94495766|ref|ZP_01302346.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] gi|94425154|gb|EAT10175.1| permease YjgP/YjgQ [Sphingomonas sp. SKA58] Length = 402 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 121/356 (33%), Gaps = 10/356 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L L+ A +L+ + + + + + +S + A +P + Sbjct: 6 DRYLARLIAVPMLGTLVIAAMLLVLDKMLSLFDFVAAEGG-PVSVVWRMLANMLPEYLSL 64 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP ++ ++ F L +SEL + RA+G+S +LL + +I L + ++ + Sbjct: 65 GIPIGLMLGILLAFRKLAMSSELDVMRAVGLSYGRLLRVPYMYAIALALINFGIVGFVQP 124 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-------ISNPQQDIFIGAKKILPENHIWED 178 L + + + + +D + I + Sbjct: 125 LSRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSRDQGRNLQGIFVRATSRDG 184 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + D D+ I L + +S L I + Sbjct: 185 QSVAVTAAQGTFLATDDPDVIIFRLRDGVLVNDAPKYKTPRILSFSSHDLPIDLPQIESF 244 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + ++ E++ + + + F+F +V + ++ + L A + ++ Sbjct: 245 RGRDNDREKTIPELV-VIGKNQATPPKLRNEVRANFHFRMVEVVFMLLLPLAALAFAIPP 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS + V I + + +S G G + P+ A P +L L + + Sbjct: 304 KRSTS-ALGVFLSIVFIVTYHKVNQYGESVGALGKIDPIIALWGPFLLASGLVLWM 358 >gi|254445062|ref|ZP_05058538.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198259370|gb|EDY83678.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 388 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 41/383 (10%), Positives = 118/383 (30%), Gaps = 27/383 (7%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY K + + + L+ + L + + ++ L P + Sbjct: 3 LIHRYILKNVFVSCMASVAMFAFLILTMSLVKDMLNLLAEGQLTVGAFFRLTKLLFPFVF 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P + ++ L+ +E+ RA G+S+ +L + + +IL +++V Sbjct: 63 VYALPMGFITGALLTMGRLSAENEITSLRAAGVSVIRLSSSVFLLAILGTTASLVVNFYY 122 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI--------------SNPQQDIFIGAKKI 169 + ++ +++ I+ + Sbjct: 123 GPLAKTEYRQELKNTIQTNPLGFIVEKTFVKDFTGSVIYVGKKEAEMLYDVWIWKLNSES 182 Query: 170 LPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN 229 + + + + + I Y D + + K + + Sbjct: 183 QVTTFARAEKGRFAFLENSAELQLDAEGVTIEYRDAEDPENFRTRNFYPASAAKFPFSFS 242 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSN-----------KSNIFHNYRAETQFYFLI 278 + + + + + +F E+ ++ + + + +A+ F+ Sbjct: 243 LEKILGK-ETLARKLTWMTFDELQGEIRKYEGIAATATGAVREEALDNLLKAKMVFHKNF 301 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 + +++ IA + L+ SR + G+ G + Y + ++ L P Sbjct: 302 AMGFAVLSFACIAIPLGLKTSRKETSA-NLGIGVGMGLLYYLAMISIEWLEGRPDLRPEL 360 Query: 339 AALIPVILTISLSILILLQKEDG 361 IP + S + ++ + G Sbjct: 361 LFWIPNLAYQSFGAWLFIRADHG 383 >gi|330448737|ref|ZP_08312384.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492928|dbj|GAA06881.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 366 Score = 96.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 116/355 (32%), Gaps = 13/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L ++ I + + L +P + Sbjct: 2 IIVRYLTRETLKSQIAVLFVLFLVFISQKFIRILADASD-GSIPSDLIMTLMGLSIPSMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A G+ LL + +I+ G + + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGMGNKLLLQSALALAIITGSIAAVNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN----HIWEDF 179 A + ++++ K + Q + + +F+ I + Sbjct: 121 APWSQDHVEQVMEKAKAGPGLNMLVKGTFQQTPDGKGVVFVDDITEKGSKLSKVFIAQLK 180 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + T+ + R ++L Y+ ++ + T N + G ++ Sbjct: 181 ATETLQPSVMVADRGLITEQPDGRQMLELNDGTRYEGIPTQLNYSITHFNNYQALIGQRE 240 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + M SN + + + + + L + + +I +S Sbjct: 241 VKQGNRDWEALPTLDLMKESNLAA-------KAELQWRFSLILCIPLLVMIVVPLSAVNP 293 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + +A + + I+ KS + GI+ I T+ +++ + Sbjct: 294 RQGRFAK-LAPAVLIYLAYFLAISSAKSAIEDGIIPSGIGMWPINIATLLVALGL 347 >gi|188532528|ref|YP_001906325.1| Putative permease [Erwinia tasmaniensis Et1/99] gi|188027570|emb|CAO95417.1| Putative permease [Erwinia tasmaniensis Et1/99] Length = 366 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLTLLGLGVPQMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ + + + + + Sbjct: 61 QLILPLSLFLAILMTLGRLYAESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++Q K N + Q + Q +FI K ++++ Sbjct: 121 GPWSSRYQNEVLQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGDTFSNVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + + ++ + ++ + Sbjct: 181 GNARPSVVVSEHGHMEQRRDGSQVVTLDQGTRFEGTALLRDFRITDFKNYQAIVG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + ++ ++ + + ++ M L+ +S+ R + Sbjct: 236 HQVVTLDPNDSEQMSLDTLWHSDKPDFRSELHWRLTLVFSVLIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G G + P A ++ ++L++L+ Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSLRSSGDKGRVDPAIAMWTVNVVYLALAVLL 345 >gi|147673657|ref|YP_001217998.1| hypothetical protein VC0395_A2082 [Vibrio cholerae O395] gi|262167531|ref|ZP_06035236.1| predicted permease [Vibrio cholerae RC27] gi|146315540|gb|ABQ20079.1| putative membrane protein [Vibrio cholerae O395] gi|227014390|gb|ACP10600.1| putative membrane protein [Vibrio cholerae O395] gi|262023984|gb|EEY42680.1| predicted permease [Vibrio cholerae RC27] Length = 366 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 109/338 (32%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADVSD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|70728449|ref|YP_258198.1| YjgP/YjgQ family permease [Pseudomonas fluorescens Pf-5] gi|68342748|gb|AAY90354.1| permease, YjgP/YjgQ family [Pseudomonas fluorescens Pf-5] Length = 372 Score = 96.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 110/348 (31%), Gaps = 16/348 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q ++ R+P + Sbjct: 2 IVFRYLSREILLTLSAVSAVLLVIIMSGRFVKFLAQAAS-GALDPGSLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL ++ + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAALVALLVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN-------HIW 176 A G L+ + + + +++ + + N Sbjct: 121 APQGANQFQLLLNKQDALTEFDTLVAGRFQALNDGTRVTYTEQLSEDRTNLGGVFISEKR 180 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + D+ N + L+ Y + + + Sbjct: 181 LGQQKKDEGISVLVAEKGHQDIRPDGNRYLILENGYRYDGNPGEANYRVIKYDTYGVLLE 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 S++ R + + RA + + + +PL++ +TL+A +S Sbjct: 241 RPDVSDEVTDRDAMPTADLI-------GKDDLRARAELQWRLSLPLLVFIVTLMAVPLSR 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + I TI+ ++ + G + P Sbjct: 294 VNPRQGR-FLKLIPAILLYMAYLTILIAVRGALEKGKISPALGLWWVH 340 >gi|253686792|ref|YP_003015982.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753370|gb|ACT11446.1| permease YjgP/YjgQ family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 371 Score = 96.3 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 123/353 (34%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ L L +++ F L I + + L VP ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVISLLGLGVPEMV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ LL + ++ + + + + Sbjct: 61 QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALALAVFTAVIATINVMWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + K N + +F+G K H++ + Sbjct: 121 SPWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + L Y+ + D T + G Q + Sbjct: 181 GNARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVT 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + A +F++ + + L ++ M L+ +S+ R Sbjct: 241 LNNSDVQQM-------DMQTLWHSDAHDARAEFHWRLTLILSVLIMALMVVPLSVVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + + ++S G + P+ + ++ +++++ Sbjct: 294 GRV-LSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAVML 345 >gi|189485654|ref|YP_001956595.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287613|dbj|BAG14134.1| permease YjgP/YjgQ family protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 384 Score = 96.3 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 41/384 (10%), Positives = 119/384 (30%), Gaps = 29/384 (7%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y K + L + ++F++D + S L A +P Sbjct: 1 MIKKLHLYTIKESFGSFLLGVAVF-SILFILDYVFELVDLFLSKGVSFFLVLKLFAFALP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I++ IP L ++ + L+ +E+ ++ G++ L P ++ ++ F + Sbjct: 60 NILRLAIPMSVLFGILIAYGKLSEDNEITAMKSSGVNYRTLSLPIIILVCIISSFLLFFN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDII--------------------------PWMQ 154 + ++ + ++L ++ K + Sbjct: 120 HFLSPAMNSNFVNLYREILTKKPLIKFTEKTTIELGEYRLYANKVNRKNNTLYEVSIYKF 179 Query: 155 ISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY 214 + +K ++ ++ + + + + + +K Sbjct: 180 ENKDDYCYGYNDEKSDKKSLFLQNNSKAWRIAASSAKVKSYQNGTQFFIYDGYWQKANFS 239 Query: 215 QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 + + + ++ + + +S EI+K + + +I E +F Sbjct: 240 DINNMTHMTFKSYCFFIPSSEVMKEQTLSMSEKSSPEILKTIKTCKEQDIPFTA-NEIEF 298 Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + + L ++ LIA + + + + I + + Y ++ + + + Sbjct: 299 WIRWIYALAPISFVLIALPIGIMAGKDGKT-IGFGMSLSIILVYYMLLILALILSEKEYV 357 Query: 335 LPVAAALIPVILTISLSILILLQK 358 +P I + I + + Sbjct: 358 PANLIMWLPNITVTAAGICLFTKM 381 >gi|291287414|ref|YP_003504230.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] gi|290884574|gb|ADD68274.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] Length = 361 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 122/356 (34%), Gaps = 2/356 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 +Y K +++ T+ + I+ + + + + E N S V + P ++ Sbjct: 4 FNKYIIKLFVQYTVIVQVFVAIITLIANTFQHTKMLSEY-NISFMTLIVYDLMKTPYLLY 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P ++ ++V L + +EL+ ++G I L PF+V I L + + I Sbjct: 63 TTMPMTIVISTMLVMVTLLKNNELIAYVSLGGKIRNLAYPFIVSGIFLSVLLYFSADVIN 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + N S + M + E I Sbjct: 123 PKIMLERERFAYENIKNRTFNVSGKLTDMWLKESDSSFININLMDPTEKKIIGITEYHLN 182 Query: 185 DKKNKIIHRKDADLAIIYNDK-VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K KKV + D + D Sbjct: 183 NNFQVDYIVTYDSAEYYEGKWIEKNKKVFAMDPVPVMTDSAEEVIQERELFDELTSLPVL 242 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + +++ + K + + Q Y L ++ + L+ + + F+R++ Sbjct: 243 SPKFLSLKEVRRTAEIMKKQDINTAKYYLQLYKSYAHALSVIVIILVIFPLCIGFNRNHS 302 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + + +F+GF + ++ +S GK+G+ P+AA IP+ L++ ++ ++E Sbjct: 303 YIAVASKSLFTGFAYWMLMASFQSLGKTGLFSPLAANFIPIGAFFILALALIYRRE 358 >gi|33151747|ref|NP_873100.1| hypothetical protein HD0553 [Haemophilus ducreyi 35000HP] gi|33147968|gb|AAP95489.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 367 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 111/351 (31%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K LK+ L L +++ F L + N L +P + Sbjct: 2 ILSRYLTKEILKSQLAILFILLLMFFSQQLISVLNSAVS-GKIPTDLVLSLLGLGMPALS 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ SE+ + RA GI L + S+ V + + Sbjct: 61 QFMLPLSLFIALLLTLGRFYADSEITVMRACGIGQGLLTKVALFLSLFTTALAVYNVFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ + K N + +M++ I K+ N ++ Sbjct: 121 TPWSINKQSQILAEAKSNPRFSALSVGQFMEVGGYVLFIENINKQENKLNDVYVFQPDQQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + ++ + L + N L +Y + + Sbjct: 181 KKNRPSVVTAELGGLQALPNGDQILTLANSTRYEGSANVADFRISHFDRYQAYLG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + + A+ + + V+ + M L+A +S R + Sbjct: 236 YQDIQTNDKRVQRANFTSLINDTSNEAKAELQWRFVLIFAVPLMALLAVPMSQVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V + + + + + ++S G++ L I + L+I++ Sbjct: 296 FAK-VIPAVLLYLIYFLLQSSLRSSGENDKLNATLFMPAVSIGFLMLAIIM 345 >gi|88802489|ref|ZP_01118016.1| hypothetical protein PI23P_07865 [Polaribacter irgensii 23-P] gi|88781347|gb|EAR12525.1| hypothetical protein PI23P_07865 [Polaribacter irgensii 23-P] Length = 351 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 124/348 (35%), Gaps = 6/348 (1%) Query: 14 LKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAV-LAATRVPLIIQQIIPFITL 72 + T L+ LL + + ID++E + E PN IS + +P Sbjct: 1 MVTFLFTLLILIPIAIAIDVSEKIDNFLEHPNLGISEVLNDYYINFIIYYSNTFMPLALF 60 Query: 73 VVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGI 132 + I+ L+ +E++ +S + L P+ +G+ L+ + ++ + + + KI Sbjct: 61 IAVILFTSKLSSNTEIIAITNAKVSFTRFLYPYFIGASLVTLLSLAMNHYVVPKSSKIRK 120 Query: 133 DLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIH 192 +++ ++ + + +I + N++ DF S T D I Sbjct: 121 GFEKKYINSSKQSNALKYVSNFSLQLTDSTYIFIRSFNTANNMGYDFNSETYDGIKLISK 180 Query: 193 RKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQKFSEQFASRS 248 ++ D + D+ N S Sbjct: 181 LSSDNIMYNPKDSTFTLTGWRKRLIYEKRDRIFSGNKLDTVFNFSTKDLVYKSAFAQEMP 240 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 E++K ++ S K + + +FY +P+ +T+IA +S R + + Sbjct: 241 SGELLKYINISKKRGVKNLNAYLVEFYKRTSLPIASYILTIIAVGLSFRKKR-GGTGVNL 299 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 A G+ F+ + + + G + +A IP I+ ++I + L Sbjct: 300 AIGVGIMFLYVFFMKVGEVLGSVAGVDSLAYVWIPNIIFGVVAIYLYL 347 >gi|332521048|ref|ZP_08397506.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] gi|332043141|gb|EGI79338.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] Length = 340 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 103/338 (30%), Gaps = 2/338 (0%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 +L + + + L E ++ + + + + P + I Sbjct: 1 MMILLFIPIGITVHLAEKIGKILDR-EAPLGETLIYFLDFTIYFAHLLFPLFLFLSVIWF 59 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 L +E++ + G+S + L P+++G+ ++ +F++L+ +A K D ++ Sbjct: 60 TSKLANNTEVIAFLSSGVSFTRFLRPYLIGATIVAMFSILLGLYLAPVASKGFNDFQYKY 119 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADL 198 + Q + + + + Sbjct: 120 LKRKNNQAQSNVLKQINDKEIIYVSSFDPIKKTGLNFSLEHFENNKMTYKISAANIRYIE 179 Query: 199 AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 K + + +++ + + E+ + + Sbjct: 180 EDSIYRLRSYLKRNVGENEDELAIERKKDTIFSFELEDLVPEEYIAETLRYSELTRFIER 239 Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 K + R + + Y +P+ + +T+IA +VS R + +A+GI + Sbjct: 240 EEKRGSSNIGRYKLELYRKWSLPVSVFILTIIAVAVS-SKKRRGGMGVNLAFGICIAMVF 298 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 I + P+ A P + L+ ++L Sbjct: 299 VFFDKIFGTMAAQSDFSPLIAVWFPNFIFGILAAILLY 336 >gi|327484988|gb|AEA79395.1| Predicted permease [Vibrio cholerae LMA3894-4] Length = 366 Score = 95.9 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 108/338 (31%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYEGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|88859092|ref|ZP_01133733.1| hypothetical protein PTD2_08809 [Pseudoalteromonas tunicata D2] gi|88819318|gb|EAR29132.1| hypothetical protein PTD2_08809 [Pseudoalteromonas tunicata D2] Length = 348 Score = 95.9 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 115/333 (34%), Gaps = 4/333 (1%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M + I + + + + A ++P + I+P + I+ + + Sbjct: 1 MTIFVSEKFVRILTEATD-GSLPAKLIISMLALKLPQLASFILPLSIFLGIILAYSRIYA 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 SE+ + +A G+S W ++ +V S +L +F + +A + L ++ K Sbjct: 60 DSEMTVFKACGVSEWYVVRVTLVSSFVLALFAGALTLVVAPWASEQEYRLEEKAKAESGL 119 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 + Q N + +FI + ++K A I+ Sbjct: 120 FSLRAGRFQQTGNEKAVVFIHDINQGGTELNKVFVAQFSENEKRPQARIVYAQHGIVEEG 179 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI 264 +++ D S L + + EQ ++ + S+ Sbjct: 180 ASGEQQLKLAAGKHYETDGISKELKVTEFSGYQVQIQEQAIEHQRRKL--EAISSSALLQ 237 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + A QF + + IPL ++ +T IA +S R + +V I + + ++ Sbjct: 238 MNTADAAAQFQWRLAIPLSILILTFIAVPLSEVNPRQGKFAKLVP-AIVFYLIYFILLNG 296 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 K + G + + + + +L++L+ Sbjct: 297 AKFAIEDGQIPVGLGLWWIHLTALFIGMLLILR 329 >gi|282892298|ref|ZP_06300694.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497889|gb|EFB40240.1| hypothetical protein pah_c221o032 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 361 Score = 95.9 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 115/340 (33%), Gaps = 3/340 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I RYFF+ +K F+ L +ID + Q ++ S + + Sbjct: 10 IWERYFFREVVKLFCVFIGSFYGLYVLIDFSSHTTQFST--HFQWSEIFSYYFYELIRRL 67 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+PF ++ I +L+ +ELV A G+S+ LL PF++ + + + Sbjct: 68 DVILPFALMLATIKTLCSLSTNNELVALMASGMSLKSLLRPFIIIGLFFTVLMYGNAEFL 127 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +K + + + + I Q + ++ + + Sbjct: 128 LPKAQKGLKQIHDRHTS-LKNKLENRGFVQHIILDDQTQILFQYYDEERQFFFDSYWIKS 186 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D +I + + L + + I Q+ Sbjct: 187 ADDIFRIKYLFPHLEVPLGRYVHHLTRNQNDELVESASFVEKEFPQIYFNQKKLQETLSL 246 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +S ++++++ +N+ + + + FY + +P + + + A + FSR Sbjct: 247 PEEQSLTDLVQQLPHNNRISHEKEAQVVSHFYHKMALPWLCLFAVIAPAPFCVRFSRGLP 306 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 +I A IF Y + K +L P+ A +P Sbjct: 307 VFMIYACSIFGLITFYLTMDAALILAKRQVLDPIWAIWMP 346 >gi|262068070|ref|ZP_06027682.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] gi|291378156|gb|EFE85674.1| permease, YjgP/YjgQ family [Fusobacterium periodonticum ATCC 33693] Length = 359 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 113/363 (31%), Gaps = 13/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF + + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGAAIFILFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + I K+ + Sbjct: 120 SIIPRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLD---QYSIYVDKVESDGKAKNIIAF 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDG 236 + K K + A ++ + LK+ + + + + + Sbjct: 177 EKPEDKTKFPMVLTGEEAFWKDNAIILKQSQFISFDETGKKNLTGTFDEKRVVLTPYFEN 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S +++K + + + + + + + V + +I +SL Sbjct: 237 LNLKIKDVEALSITDLVKNIRKVE---TEEVLKYKIEIFRKLALIFSTVPLAVIGFCLSL 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R ++ + F + I +G + P A P +L L + Sbjct: 294 GHHRISKK-YSFVLAMIIIFAYIIFLNIGIVMASAGKIHPFIATWTPNVLLYFLGYKLYR 352 Query: 357 QKE 359 KE Sbjct: 353 AKE 355 >gi|167585748|ref|ZP_02378136.1| permease YjgP/YjgQ family protein [Burkholderia ubonensis Bu] Length = 382 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 107/363 (29%), Gaps = 26/363 (7%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLFEKYFARQIYVTFVFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHI 175 + +++ + Q W+ + + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARDNGEQVTRFVNVGSLSPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R L V E + Y Sbjct: 180 SNVRIYEFDSKFQLQNVRIAQTGRYEAPGHWLLTGVTETELTPIKPIGGQPADALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + + N R + + Sbjct: 240 SQQVTLPEFRLRSDLTPQILSVLLVSPERMSLINLFRYIQHLKE-NQQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 ++ P + M +++ + +R+ + V GI G + T+ G Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLLNTLFSHIGTLNTWPAP 358 Query: 338 AAA 340 A Sbjct: 359 LTA 361 >gi|260772182|ref|ZP_05881099.1| predicted permease [Vibrio metschnikovii CIP 69.14] gi|260613049|gb|EEX38251.1| predicted permease [Vibrio metschnikovii CIP 69.14] Length = 367 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 105/338 (31%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ ++ + + + A +P + Sbjct: 2 IIVRYLIRETLKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPARMILSIVALNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +I+ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAIITSSAAAFNAFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + LI+Q + + + +FI + +++ + Sbjct: 121 SPWSQDKEAQLIEQLAAESSVDLLQKGQFQRSPDGSSVVFIDNIENRKLQNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + + + +Y +P + + S + Sbjct: 181 QSILPSVMFSDSGEVKELSDGRQMITMHNGVRYEGVPTRLDYMITRFDQYEGLIGQRSVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + E N + RA+ + + I + L + +T++ +S R + Sbjct: 241 AKGRDWQETPTLALIRN-----PDSRAQAELQWRISLVLCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + I+ MKS + G + Sbjct: 296 FAK-MGPAILIYLTYFLTISAMKSALEDGTIPIEIGMW 332 >gi|254498611|ref|ZP_05111330.1| permease [Legionella drancourtii LLAP12] gi|254352151|gb|EET10967.1| permease [Legionella drancourtii LLAP12] Length = 359 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 116/354 (32%), Gaps = 2/354 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + T + +++ L + N+ L +P ++ Sbjct: 2 IIFRYLAREVFVTLIALTSILVLIFLSNQLIQYLNRAAS-GTIPGVIIMKLMMLELPTLL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V + L SE+ + RA G QLL + +I + + V+ Sbjct: 61 SLLVPLGFYIAMLVAYGRLYAESEMTVLRACGYGPNQLLQHSFIMAIGVALIVAAVMIWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L++ Q + N Q+ ++ + + Sbjct: 121 SPYIYIERAKLLRTTGIQTLVQTIMPGRFHAAHNGQEVFYVQSMSRDHSKAEHVFLAKRS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +K AD A D + + Q G+ + ++ Sbjct: 181 KEKNKMRWDVLWADKAFAETDAKTGEDYIILQDGKEYQGTPGHADYQISEFGEYKARLPH 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + S + + + + +P+M++ +TL+A +S SRS + Sbjct: 241 PIVKINDDLRTFSTASLWPLNNADPGKAAELQWRLSVPIMVLTLTLVAVPLSRINSRSGK 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + ++ I + SG + L ++L + ++ + Sbjct: 301 YAK-LFPAIIIYILYANLMFIGRDAIVSGKIPQWLGLWWIHFLVVALGLFLIWR 353 >gi|15642496|ref|NP_232129.1| hypothetical protein VC2500 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153215710|ref|ZP_01950091.1| membrane protein, putative [Vibrio cholerae 1587] gi|153822404|ref|ZP_01975071.1| membrane protein, putative [Vibrio cholerae B33] gi|153831206|ref|ZP_01983873.1| putative membrane protein [Vibrio cholerae 623-39] gi|227082619|ref|YP_002811170.1| hypothetical protein VCM66_2422 [Vibrio cholerae M66-2] gi|229507442|ref|ZP_04396947.1| hypothetical protein VCF_002671 [Vibrio cholerae BX 330286] gi|229509633|ref|ZP_04399114.1| hypothetical protein VCE_001033 [Vibrio cholerae B33] gi|229516758|ref|ZP_04406204.1| hypothetical protein VCC_000775 [Vibrio cholerae RC9] gi|229521565|ref|ZP_04410983.1| hypothetical protein VIF_002101 [Vibrio cholerae TM 11079-80] gi|229606948|ref|YP_002877596.1| hypothetical protein VCD_001857 [Vibrio cholerae MJ-1236] gi|254291418|ref|ZP_04962210.1| membrane protein, putative [Vibrio cholerae AM-19226] gi|254851045|ref|ZP_05240395.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744521|ref|ZP_05418473.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297581347|ref|ZP_06943270.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500669|ref|ZP_07010473.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657081|gb|AAF95642.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124114628|gb|EAY33448.1| membrane protein, putative [Vibrio cholerae 1587] gi|126520047|gb|EAZ77270.1| membrane protein, putative [Vibrio cholerae B33] gi|148873313|gb|EDL71448.1| putative membrane protein [Vibrio cholerae 623-39] gi|150422608|gb|EDN14563.1| membrane protein, putative [Vibrio cholerae AM-19226] gi|227010507|gb|ACP06719.1| putative membrane protein [Vibrio cholerae M66-2] gi|229341159|gb|EEO06163.1| hypothetical protein VIF_002101 [Vibrio cholerae TM 11079-80] gi|229345821|gb|EEO10793.1| hypothetical protein VCC_000775 [Vibrio cholerae RC9] gi|229353107|gb|EEO18046.1| hypothetical protein VCE_001033 [Vibrio cholerae B33] gi|229354947|gb|EEO19868.1| hypothetical protein VCF_002671 [Vibrio cholerae BX 330286] gi|229369603|gb|ACQ60026.1| hypothetical protein VCD_001857 [Vibrio cholerae MJ-1236] gi|254846750|gb|EET25164.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738046|gb|EET93439.1| putative membrane protein [Vibrio cholera CIRS 101] gi|297534185|gb|EFH73023.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540838|gb|EFH76895.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 366 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 108/338 (31%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|171913020|ref|ZP_02928490.1| permease YjgP/YjgQ family protein [Verrucomicrobium spinosum DSM 4136] Length = 385 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 42/383 (10%), Positives = 114/383 (29%), Gaps = 26/383 (6%) Query: 1 MP-GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQM-GELPNYSISRGAVLAATR 58 MP I RY ++ +TL +L ++ + ++ + ++ G+ + + A Sbjct: 1 MPLRIFDRYIWRQVSSSTLTGVLVLTGVMVLGNVFKEMERLLGDTASLPLMAVAQFITYV 60 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +P + IP+ L ++VF ++ +E+ R G+S+ ++ SI + L Sbjct: 61 IPYSLIFTIPWALLTAILLVFGRMSADNEMTALRMTGMSMPRICAAVFALSIFMSGVCYL 120 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 V +A + L + + + + +N Sbjct: 121 VNVELAPLAKTKIKRLFYDLALDDPAVLFQPGKVLDRFPGYRIFTQEREGNKLKNVEIIQ 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVV-------------------EYQYGRI 219 ++ + + + + ++ L+ + Sbjct: 181 TNLGRAERYIRAKRAEVVVTPGVTDFQLHLRNATVETGGGEADAASAGGEVNIMNDLQFL 240 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR----AETQFY 275 + + T + + ++ + S S+ + + + T+ Sbjct: 241 YMGDTAITFPLSKLKEKTERVTSSMKDTSALWSEVNTGISSVDGQPLSEKLISVSRTELS 300 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 L + TL+ + + R I A + + + + + Sbjct: 301 MRYSFSLAAIVFTLVGIPLGITAQRRE-TSIGFALSLIVAVSYMVFVIFVNGLNERPSVY 359 Query: 336 PVAAALIPVILTISLSILILLQK 358 P IP ++ I + + + Sbjct: 360 PHLLMWIPNLIFIGVGSRMFYKL 382 >gi|227114629|ref|ZP_03828285.1| putative permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 371 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 125/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ L L +++ F L I + + L VP ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVISLLGLGVPEMV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ LL +V ++ I + + + Sbjct: 61 QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + K N + +F+G K H++ + Sbjct: 121 SPWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVKGSEFEHVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + L Y+ + D T + G Q + Sbjct: 181 GNARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVT 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + N + A +F++ + + + ++ M L+ +S+ R Sbjct: 241 LNNSDVQQM-------DMNTLWHSDAHDARAEFHWRLTLIISVLIMALMVVPLSVVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + + ++S G + P+ + ++ +++++ Sbjct: 294 GRV-LSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAVML 345 >gi|196228894|ref|ZP_03127760.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] gi|196227175|gb|EDY21679.1| permease YjgP/YjgQ family protein [Chthoniobacter flavus Ellin428] Length = 376 Score = 95.5 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 45/374 (12%), Positives = 106/374 (28%), Gaps = 18/374 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY L T + +++ + ++ + + + + + +P Sbjct: 1 MKLIDRYVGGQLLVTFSLAVSVLSVVLVLGNIFKQLLDLLVKNDTPLEVVVSFLSYILPF 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP+ L ++VF L+ ELV RA G+SI +L + + + Sbjct: 61 SLSFTIPWAFLTAVLLVFGRLSAEHELVAFRASGVSIPRLCYTVFLLAAACVATCFWINI 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + + + ++ + N + + Sbjct: 121 DVAPRAQGKMKEALYNVAVTNPLAMFGADLVIDSFPNKKIYLESSNGPELHNLLVYESND 180 Query: 182 ITIDKKNKIIHRKDA-----------DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 + K R + + V + I TL I Sbjct: 181 DNLLLKVIFARRGLIETDGEKKQLLLHIYDATYEARDDDDVENLLKIKQGITMREATLPI 240 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLML 284 ++ + S + ++ +S +S + R E L Sbjct: 241 SLEELHKKYHKGGLPSMTTGALLDHLSEKTESTMTEKERIEQHSATITEINKRYSFSLAA 300 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + L+ +++ R I + + Y I I + + P +P Sbjct: 301 ICFALVGVPLAITAHRKE-TSIGFLISLCVALVYYFFIIIANTVREKPQWHPAELVWVPN 359 Query: 345 ILTISLSILILLQK 358 IL + + + Sbjct: 360 ILCVVFGGWLFYRM 373 >gi|229513427|ref|ZP_04402891.1| hypothetical protein VCB_001072 [Vibrio cholerae TMA 21] gi|229349304|gb|EEO14260.1| hypothetical protein VCB_001072 [Vibrio cholerae TMA 21] Length = 366 Score = 95.2 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 107/338 (31%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L+ Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMDQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|294782104|ref|ZP_06747430.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] gi|294480745|gb|EFG28520.1| permease, YjgP/YjgQ family [Fusobacterium sp. 1_1_41FAA] Length = 359 Score = 95.2 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 113/363 (31%), Gaps = 13/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF + + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGSAIFILFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + I K+ + Sbjct: 120 SIIPRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLD---QYSIYVDKVESDGKAKNIIAF 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDG 236 + K K + A ++ + LK+ + + + + + Sbjct: 177 EKPEDKTKFPMVLTGEEAFWKDNSIILKQSQFISFDETGKKNLTGTFDEKRVVLTPYFEN 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + S +++K + + + + + + + + + +I +SL Sbjct: 237 LNLKIKDVEALSITDLVKNIRKVE---AEEVLKYKIEIFRKLALIFSTIPLAVIGFCLSL 293 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R ++ + F + I +G L P A P +L L + Sbjct: 294 GHHRISKK-YSFVLAMIIIFAYIIFLNIGIVMASAGKLHPFIATWTPNVLLYFLGYKLYR 352 Query: 357 QKE 359 KE Sbjct: 353 AKE 355 >gi|78486088|ref|YP_392013.1| permease YjgP/YjgQ [Thiomicrospira crunogena XCL-2] gi|78364374|gb|ABB42339.1| YjgP/YjgQ family protein [Thiomicrospira crunogena XCL-2] Length = 369 Score = 95.2 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 115/352 (32%), Gaps = 10/352 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y +K T L +++ F + ++ + + + ++P Sbjct: 1 MRILDKYLYKELFATFFAVLSVLLLITFGTEATKLLA-VAVEGAIPSTVIMQVLLYKIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+P + L+ ++ L + E+V+ ++ GI+ + L T V Sbjct: 60 ALEVILPLVALLSVMLAVGRLYQDQEMVVLQSCGIATSFFQKRVFWFLVPLAFLTAWVSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + LI + + + + N + + + K + Sbjct: 120 VVTPWSYEQERKLIMEAQTTSPLAALVPGKFNPLPNGEGIFYTRSIKSNGDLESVW-VRL 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T ++ ++ K I + L Y+ + D + D F+ F Sbjct: 179 NTDERDILLMAPKGKFEWINGKLVLVLLNGRSYEGLKKGDDF------TVREFDRFEGFL 232 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S S + + ++ S E + IV P ++ + L+ +S R Sbjct: 233 PEIQSTSTAQQVFEIPTSTLWQS-DKPEHEALLQWRIVTPFSILVLGLLGLKMSKSGPRE 291 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + V + + + ++ + + L P ++ + ++ Sbjct: 292 GRFAK-VFFALVLYVIYNQLLVTFRESISNEALSPWVGLWPIPVVFLMYALY 342 >gi|300725026|ref|YP_003714352.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] gi|297631569|emb|CBJ92278.1| putative transmembrane protein, transport [Xenorhabdus nematophila ATCC 19061] Length = 366 Score = 95.2 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L E+ N + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVEVLG-AAVEGNIPANLVISLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ L+ ++ ++L I + Sbjct: 61 QLILPLSLFLGVLMTFSKLYTESEITVMHACGLGKSVLVKSALILALLTSILAAANVIWF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K ++ K N + + ++IG K +++ T Sbjct: 121 IPESSKYQAQVLADAKTNPSLAAIMEGQFKPSRDGNMVLYIGNVKGNTFENVFLAQLRST 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D++ +I + N +Y + ++ Sbjct: 181 NDQRPSVIFADGGHMEERPNGNQVAVLHQGTRYEGTALLRDFRITEFTNYQAVIGHQRAD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + + +F++ + + L ++ M L+ +S R + Sbjct: 241 IDNNKVEQ-----KSLEQLWHATDDDSRAEFHWRLTLILSVLIMALMVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G G L P+ + ++L++ + Sbjct: 296 I-LSMLPAMLLYLIFFMLQSSLRSNGSKGKLDPMFWMWLVNGSYLALAVAL 345 >gi|317051997|ref|YP_004113113.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] gi|316947081|gb|ADU66557.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] Length = 356 Score = 95.2 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 125/352 (35%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y F+ YL + + L V+D+ + + S + A + + + Sbjct: 2 TLLLYTFRQYLHIIFLAMAVLVALYGVVDIIGNLDDFA---HLSSLQIAYYVGATLLIGL 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P I L+ ++ + +E+ I + GIS+ ++ P +V L+ + Sbjct: 59 YHLTPAIMLIATVMYITTIGVNNEMKIMLSAGISLKKISLPVLVFVSCAAGAHFLLGEQV 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L + + I + + N F ++ EN++ T Sbjct: 119 FQHIKPEVDALQKYEARQQRPPSAIIAGNLWVRNYDGTSFARIRRFNMENNLLLGVEIYT 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFSE 242 ++ I AD + ++ L+ VV + + + + M+ + + Sbjct: 179 -VREGMIQEYVSADHGSLQEGRIHLEGVVIRNFMTQQVSRLPEHQVEFTGIMESTKASIK 237 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S E+ ++ ++ + ++ + L ++ ++L+A + + R + Sbjct: 238 PLEEYSSRELASDIAILREAGHPSHL-YVSELLRRVSYSLAIIVLSLVAIPLGVTGERKS 296 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V G+ + + + ++ + GK + P A I + + L + + Sbjct: 297 GKIFSVTVGLLVAMVYFIVDSLAMTLGKGDAISPYIAPFIANGVFLGLFVFL 348 >gi|114331100|ref|YP_747322.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] gi|114308114|gb|ABI59357.1| permease YjgP/YjgQ family protein [Nitrosomonas eutropha C91] Length = 357 Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 104/343 (30%), Gaps = 12/343 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 GI+ RY + L + + L + L + + Sbjct: 1 MGIIERYISRELLLPFFVVTIILIGLFVSFSVARFLTGAVAET-LGAIAMFKLVGLKTII 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V I +NR E+ + R++G Q++ + ++ + + + ++ Sbjct: 60 ALEVLVPIAFYVAVIHGLSRMNRDQEINVLRSVGYGDNQIIRTVFIIALPIAVLSGVLSI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + Q + + + + + IFI K L + Sbjct: 120 YARPWAYAESYVMNAQAEAELNTDRFQPGRFYGSEKSGRVIFIRGKDDLEKRMEGIFHYI 179 Query: 182 ITIDKKNKIIHR--KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 T + + I+ R + ++L Y+ G ++ I + + Sbjct: 180 RTAENREIIVSREGYQQPMTQEQWPYIELLDGKIYRLGYDAARDSTVQFEKMIYFNENDQ 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +K + + + + + + P + + LIA S + Sbjct: 240 AQN---------YRRKAASTQSLWNSEQPQEIAELQWRLSRPAATILLALIAVSFTRTAP 290 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 R ++ + Y + + K++ + G++ V Sbjct: 291 RKDKADRTFIVAALVFAVYYNLSGLAKTWVEQGVVAAVPGIWW 333 >gi|315185938|gb|EFU19702.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6578] Length = 361 Score = 95.2 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 117/361 (32%), Gaps = 7/361 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ R+ ++L L+ + ++ +IDL + + + + L +P Sbjct: 1 MRIITRFALSWFLPLFFAALVSFVTILELIDLFTNLVAYID-ADLTTFQILHLQLLYLPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P TL +L+ ++EL+ GIS+++ + PFVV +L + Sbjct: 60 CVTYSLPIATLFAVAFSLGSLHASNELIALFGAGISLYRFVLPFVVCGLLFSGAYFFIEE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +L+ + + + N + Sbjct: 120 LLAIPSLTQKQELMAILMGRTSPTQVVNVTLVGEENRLVVHTRRYDDRSRTITRVLVYEK 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPI----KMDGF 237 I + + V + + + + S + + F Sbjct: 180 DEEGAFASRIEAERGTWDPEQREWVLQRVRRYIRDEEGNLKEESFEKLRTDLGEIQPEDF 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + E + + ++ + A T +Y I + L+A+SV+ Sbjct: 240 LQTRHSIDKMTLAEAGRWIQTLKRAGLP-YREALTDYYKRISFAFTSFIVALLASSVAGR 298 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 F + ++ + G Y + F K G L PV A +PV++ S SIL Sbjct: 299 FKANALLLSLLLS-LSIGVSYYVFQMVTTLFAKLGYLPPVVGAWLPVLVFFSGSILFFKY 357 Query: 358 K 358 Sbjct: 358 I 358 >gi|311694207|gb|ADP97080.1| permease YjgP/YjgQ family protein [marine bacterium HP15] Length = 369 Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 37/353 (10%), Positives = 118/353 (33%), Gaps = 6/353 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I++RY + + + + +++ + + + + S + A R P Sbjct: 1 MSIIFRYLIRQIMISMVAVSGILLLVFMSGRFLKYLDSAAQ-GSISAGVLLEIMAFRFPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+P + ++ + + SE+ + A G+S LL ++GS+ + I + Sbjct: 60 FLELILPLGLFIGILLAYGRMYLESEMTVLSACGVSDKALLGKTLLGSLPVMIIVGAMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ G +++ + + + + + S+ + + + + + Sbjct: 120 YVSPWGMNQVQEILNEQRKATEFEMLAPGRFQDFSSGGRVT--YTEALSEDKRQLQGVFI 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + AD D + + + G I + + Sbjct: 178 AEYAPDGRGLTIITADSGSQLIDPETGSRFLILENGGRFEGAAGQLNYNVIDFEAYGLKI 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E + + + ++ + + ++ +PL++ +TL+A +S R Sbjct: 238 EGGEAGT--KQREEGASTWSLMQSDRLEDRALLHWRFSLPLIVPIVTLLAVRLSRVNPRQ 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + ++ + + + +G + L L + + + Sbjct: 296 GR-FFHLLPAMLVYITYLGLLIVARDWLAAGKVPEWLGMLWVHALFLGFGLWL 347 >gi|260779401|ref|ZP_05888292.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] gi|260604491|gb|EEX30791.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] Length = 367 Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 114/351 (32%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L ++ L ++ + + S + +P + Sbjct: 2 IIVRYLIRETLKSQLAIFFILFLVFLSQKLIKVLADASD-GDIPASLVMHYVSLSMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ G+ Sbjct: 61 LLMLPLSLFLGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLAVITGVIAAANAFVF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ I L ++ + + + +FI + H++ Sbjct: 121 SPMSQEKLIQLQEEVEAENSVDLLQKGQFQGTPDGSSVVFIDDIEGKQLKHVFVAQMRPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + ++ +Y +P + + + + Sbjct: 181 DSILPSVSFSQSGEVKELSDGRQVIRMYDGTRYEGVPTRVDYMVTDFDQYEGLIGQRDVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + I + + RA+ + + I + + + +T++ +S R + Sbjct: 241 PKGRDWEAIPT-----MQLVSNPDPRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + I + I+ KS + G + + +I I Sbjct: 296 FAK-MGPAILIYLAYFLSISATKSALEDGSIPSFIGMWPINAALLLTAIGI 345 >gi|148977744|ref|ZP_01814300.1| putative permease [Vibrionales bacterium SWAT-3] gi|145962958|gb|EDK28228.1| putative permease [Vibrionales bacterium SWAT-3] Length = 360 Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/345 (9%), Positives = 106/345 (30%), Gaps = 7/345 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + +K+ ++ + + S + + +P + ++P Sbjct: 1 MIRETIKSQFAIFFVLFLVFLSQKFISVLADASD-GAIPASLILSIVSLNMPAMGLLMLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++ F L SE+V+ A GI L+ + +++ ++ + Sbjct: 60 LSIYIGILLTFGRLYAESEIVVMNATGIGNKFLIQSALYLALITASVAAFNSFWLSPWSQ 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + ++ + + +FI +++ Sbjct: 120 DKVEQMYEEVAAENSVDLLPKGKFEGTPDGSSVVFIDDIDGNKLENVFVAQMRPRDSVLP 179 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 +++ K D+ + + + + ++ +P + + + + R Sbjct: 180 SVMYSKSGDVKELSDGRQVIVMYDGTRHEGVPTRLDYMVTHFEEYEGLIGQREVEKKGRD 239 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + + + +N A+ + + I + L + +T++ +S R + + Sbjct: 240 ----WEAIPTLDLVGNPNNS-AKAELQWRISLVLCIPLLTMLVVPLSAVNPRQGRFAK-I 293 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 I + I+ KS + G + V L + ++I Sbjct: 294 GPAILIYLTYFLAISATKSAIEEGSIPAVVGMWPINALLLIVAIG 338 >gi|229524483|ref|ZP_04413888.1| hypothetical protein VCA_002078 [Vibrio cholerae bv. albensis VL426] gi|229338064|gb|EEO03081.1| hypothetical protein VCA_002078 [Vibrio cholerae bv. albensis VL426] Length = 366 Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 109/338 (32%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLAEASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|254303140|ref|ZP_04970498.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323332|gb|EDK88582.1| possible ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 359 Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 107/344 (31%), Gaps = 3/344 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF + + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + + I++ + F Sbjct: 120 SIIPRSFIKLKYVGAKIAYENPVFQLKEKTFI-DNLDEYSIYVDEVDSDGKAKNIIAFEK 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + + +K + V + + + FQ + Sbjct: 179 PEDKSKFPMVLTGEEAFWKDNSIILKESQFVSFDETGKKNLVGTFDEKRVVLTAYFQDLN 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + II + K R + + + + + V + +I +SL R Sbjct: 239 IKIKDVEALSIIDLIKGLKKVEATEAIRYKIEIFRKLALVFSTVPLAVIGFCLSLGHHRI 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 ++ + + F + I +G L P A P + Sbjct: 299 SKKYSFI-LAMIIIFAYIIFLNIGIVMATAGKLNPFIATWTPNV 341 >gi|152987845|ref|YP_001346668.1| hypothetical protein PSPA7_1283 [Pseudomonas aeruginosa PA7] gi|150963003|gb|ABR85028.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 372 Score = 94.8 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 113/356 (31%), Gaps = 6/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ A R+P + Sbjct: 2 IVFRYLSREVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQ-GLLDPGSLFLIMAFRIPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + ++L+ I + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G L+ + + + + +++ + Sbjct: 121 APQGINQFALLLNKQDTLTEFDTLVPGRF--QAMRDGTRVTYTEELSKDRGELAGIFISQ 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + R + L + Y + + + + Sbjct: 179 KDLNSSNQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIKYDTYGVM 238 Query: 244 FASRSFYEIIKKMSFSNKSNIF--HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + ++F N R + + + + PL++ +TL+A +S R Sbjct: 239 LPKPEASSEVSERDAVPTVDLFGSDNPRYQAELQWRLSTPLLVFVVTLLAVPLSRVNPRQ 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + I ++ ++ G + L +++ +++ Sbjct: 299 GR-FLKLLPAILLYMAYLALLIAVRGQLDKGKIPMAVGLWWVHGLFLAIGLILFYW 353 >gi|218961270|ref|YP_001741045.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] gi|167729927|emb|CAO80839.1| putative Permease YjgP/YjgQ [Candidatus Cloacamonas acidaminovorans] Length = 442 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 46/410 (11%), Positives = 118/410 (28%), Gaps = 57/410 (13%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K ++ L+ ++ + ++ N + E + +P Sbjct: 1 MKILKRYLLKEHIAPFFIALMVVTFVLLSDRIIDLMNLIIEKK-LPWQTVFEVFGLSLPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IP LV I+ F ++ E+ ++ GI+++ L+ P V+ ++LL V + Sbjct: 60 MLALSIPMAVLVATILAFGRMSVDREITAIKSSGINVYSLIGPLVIAALLLTGLMVYFNH 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +L+ + + + +L + I++ S Sbjct: 120 WFLPDTNHKLKNLMLKIAYYKPMTIIKEKEFTNFMDYTIYARETTDSLLTDVLIYDRSQS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP--------IK 233 + + + + TT + Sbjct: 180 HFPRTIFAKSGNVIQKDNGNSLQIILNDGEMHERNEKEVGKYQKTTFSRYIINVRNLGSN 239 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAET--------------------- 272 M+ F+ ++ ++I + K E Sbjct: 240 MEMFETGYRSDREMTYNQLITAIGDHKKELQTKQQEIEELNKRIELLQKSPQNFTRNMEL 299 Query: 273 --------------------------QFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 +++ + ++ LI + L +R++ + Sbjct: 300 RRLQAMQKMVIDRTQELKELINSLLVEYHKKFSMSFAIIIFVLIGIPLGL-MTRTSGIGM 358 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + Y + + G + P A + I+ + L++L+++ Sbjct: 359 SFSVSSIIFLVYYIALNGGEQLADKGFMPPFLAMWLANIIFLILAVLLII 408 >gi|24213174|ref|NP_710655.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45656313|ref|YP_000399.1| hypothetical protein LIC10413 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193889|gb|AAN47673.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45599547|gb|AAS69036.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 386 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 118/361 (32%), Gaps = 9/361 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y F + K + ++ ++ + +N+ A+ +P II Sbjct: 27 ILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNLRNFTATK-APRYHVALFLVYSIPKII 85 Query: 64 Q-QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 ++ + + ELV A G+S ++++ P ++ IL+ I +L Sbjct: 86 STTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVTPLILFGILMWIIMLLATEL 145 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I K+ + + + + E + ++ + Sbjct: 146 IVRPVNKLAKIEHDTLTEGMGTLANSVYQFHVKGKEGFYYLYFYDPDKDEINGGFNYIRL 205 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDGF 237 D + + K+KKV E+ + +P + F Sbjct: 206 RPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDNDLKLSSQETYEEKEYELPEEPSYF 265 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + +++ ++ + T+ + + +P+M + +TLI Sbjct: 266 KVPAGSVEEMNLFQLKEEEKRRIQKG-LAYGDVLTEKHSVFALPMMTIIVTLIGTIAGYF 324 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ + I + Y + KS G++G++ P A I L + L + + Sbjct: 325 TKKTAGVA-SLGITIGVVLIYYIFNSAGKSLGENGVIPPFAGVWITPSLFLGLCFWMFRR 383 Query: 358 K 358 Sbjct: 384 M 384 >gi|153801086|ref|ZP_01955672.1| membrane protein, putative [Vibrio cholerae MZO-3] gi|124123319|gb|EAY42062.1| membrane protein, putative [Vibrio cholerae MZO-3] Length = 354 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 108/338 (31%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|297620917|ref|YP_003709054.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] gi|297376218|gb|ADI38048.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] Length = 359 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 114/356 (32%), Gaps = 1/356 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I RYF K LKT + L +ID S A L Sbjct: 4 KIWERYFIKETLKTFFFISFCFYGLYVLIDYASHSGARHHQSMMEWSELIKFYANEWILR 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 ++PF ++ I +LN +ELV +A GIS+ ++L PF+ +L + Sbjct: 64 ADVLVPFALMIATIRTLCDLNIHNELVALQASGISLKKILRPFIFLGLLFTLLIYANTEF 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + L Q + + + + + E ++ + Sbjct: 124 LLPNAMAASRHLRNQKEIQKNNKNKKFFVQ-HVGLKDGSTLLYQHYNFAERSFFDAYWVK 182 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D+ + H + +++ + +I ++ + + Sbjct: 183 SFDEIWRFQHLSPYEQPPKGIGVGHFQRMPDNTLHKIESFESRSFPEMKFNQKILLDTLT 242 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S + K++ S + F+ +P + + A + + RS+ Sbjct: 243 PSRELSLSTLWKRLPHSKEIESEKEAEFAASFFHKSALPWLCFFAVIAPAPFCVRYGRSH 302 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 I + +F Y I+ + +L P A +P +L S ++ L + Sbjct: 303 PIFFIYSLSLFFLVGSYLILNAALIISERQVLSPEVAIGVPFMLFSSTTLYRFLYR 358 >gi|229527563|ref|ZP_04416955.1| hypothetical protein VCG_000632 [Vibrio cholerae 12129(1)] gi|229335195|gb|EEO00680.1| hypothetical protein VCG_000632 [Vibrio cholerae 12129(1)] Length = 349 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 108/338 (31%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYEGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|281357796|ref|ZP_06244282.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] gi|281315743|gb|EFA99770.1| permease YjgP/YjgQ family protein [Victivallis vadensis ATCC BAA-548] Length = 371 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 125/373 (33%), Gaps = 21/373 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y + +L + + +L ++ + + + S +P+ Sbjct: 1 MKILNWYVTRGFLLAFFMAIGILTFGMTGANLVKVLDYVSQ--GISFFTFFEFTLYILPI 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ +P+ +V ++VF L+ SE+ RA G+SI Q+++P ++ + L +F + + Sbjct: 59 ILTFTVPWAVMVAVMLVFGRLSADSEITAMRACGVSILQIVSPILIITFFLMLFCLYLQV 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP----------------QQDIFIG 165 + L+Q N + ++ N Q Sbjct: 119 EVGPPLLGKSRTLMQTAAINQPLAIFEPGKQIEFENTIIYIDDKEGEDGIKGVQIYTLSD 178 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 + + + + +K+ I+ D + + + R + Sbjct: 179 PQTVAQDISAERGKLLVDKEKQLLIVRLFDCLVVDKKGAAEQQQDGDAGMPTRFFTQQLE 238 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 + N + + ++ S + +++ K+ + E + I L + Sbjct: 239 FSFNYGKQANE-RRISTKAKYMKLTDLMGKIRLTK-QLERDTTELEVELNQRIAFALSPI 296 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 A L+ +++ SR + + + + + I + +S L P +P I Sbjct: 297 AFLLLGLPLAIRTSRRE-TSVGLFLSVILAGVFFLSIILCESLSSFPHLYPQYLLWLPNI 355 Query: 346 LTISLSILILLQK 358 + L ++ + Sbjct: 356 IFQILGAVMTYRI 368 >gi|118581150|ref|YP_902400.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] gi|118503860|gb|ABL00343.1| permease YjgP/YjgQ family protein [Pelobacter propionicus DSM 2379] Length = 367 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 119/352 (33%), Gaps = 8/352 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + + +++ N S L + +V + + Sbjct: 2 IIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVN-GLLSGGTVVALVSLKVLIAL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +IP + ++ L E+ A G+S +L++ + +ILL + + Sbjct: 61 EVLIPVTLYLAIVLALSRLYADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 L + ++ D K + + ++ ++ A+K+ P + + Sbjct: 121 RPWAYGKMYLLETRGQNEFDIAKVEAGRFYEL---SHNLVFFAEKLDPARNQARNVWVWE 177 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + + K +V + ++ + T ++ + + + Sbjct: 178 FGPEKRRVTSARSAFQTNGPGEGQ-KAIVFQEGSHYSLNLKTGTDHLVGFQENVLQL--E 234 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + +K + + + + + + V M L+A +S R + Sbjct: 235 PPQIPPAKYRRKAASTEHLATSTDPADIAELQWRFSTGISTVLMALLAIPLSRVAPRRGK 294 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 V I F++Y + I K++ + ++ V +L L + +L Sbjct: 295 YGK-VVAAIILFFVIYNLSLIAKTWVEKQVVGAVPGIWWVTLLNAGLVLFLL 345 >gi|114328863|ref|YP_746020.1| hypothetical protein GbCGDNIH1_2199 [Granulibacter bethesdensis CGDNIH1] gi|114317037|gb|ABI63097.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 400 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 111/360 (30%), Gaps = 7/360 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + L + G + L+++ + S+ L +P + Sbjct: 20 TLDRYVMRQLLVALVACTCGLVALIWLTQSLRFIELVVNR-GLSVFVFLKLTGLLIPSFV 78 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IIP T VV V+ L EL + RA G+S W + P ++ ++L + + ++ I Sbjct: 79 AVIIPITTYVVVQFVYQRLAGDRELTVMRAAGLSSWVMARPALLVALLTMLLSFVLNLWI 138 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + ++ + +S+ + I D Sbjct: 139 VPAAFSAFREYQWEIRNKMAAFLLQDGVFTPVSDDMIVYIRKRDADGTLHGILIDDARKA 198 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN----IPIKMDGFQK 239 I R + +V L+ + R N T N + ++ Sbjct: 199 DSHATIIAQRGRMEQGSNGAPQVVLESGSRQELDRHTGRLNILTFNENTISLEQSGKDEQ 258 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S S E++ + R E + ++ A+ + + ++ F Sbjct: 259 RSRDANEMSLTELLHPDPSQVMARDIPKLRVEAHRRLSGPLNVLSFAVVALVSVLNGAFR 318 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R + +L + + + K L+P+ I + I+ E Sbjct: 319 RHGGLLRPGVAALVVVALLAVGLAVANAAAKLPQLIPLI--WIAAVAPGMAGAWIMFWPE 376 >gi|126728787|ref|ZP_01744602.1| Predicted permease [Sagittula stellata E-37] gi|126710717|gb|EBA09768.1| Predicted permease [Sagittula stellata E-37] Length = 376 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 110/358 (30%), Gaps = 9/358 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY + +F L + + +V + +++ + S A +P +I Sbjct: 4 FDRYVLSQLMVLFGFFALVLVSVYWVNRAVVLFDRLINDGH-SARIVLEFTALSLPAVIA 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P T + V L+ SEL + +A G S W+L P +V I++ + ++ + + Sbjct: 63 LVLPMATFAAAVYVTNRLSGDSELTVVKATGFSPWRLARPVLVFGIMVTLMMSVLTHVLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 K Q+ + + ++ S + Sbjct: 123 PQSLKQLRMREQELSSSVSARLLREGTFLHPSKGITFYIRDITPEGTLQDVLLSDRREPE 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGFQKF 240 + R V L + + + + T ++ + + Sbjct: 183 REVIYTADRAYLIRDDEGPKMVMLAGLAQTMNTTDMRLSTTNFSDFTYDLTGLITASPQK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EF 298 + + E++ + + PL+ V LI S + F Sbjct: 243 RRKLDAIPTTELLLNTDGIAAETGQQIGEVLEEAHMRFQGPLLCVVAALIGYSALMVGVF 302 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 SR R IV + + ++ L P+ A P + ++ + ++L Sbjct: 303 SRFGVTRQIVFAIFLLVVVKLVESAVTDPVVRNPRLWPLVYA--PSVTGLAFTWILLW 358 >gi|209964866|ref|YP_002297781.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209958332|gb|ACI98968.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 372 Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 114/341 (33%), Gaps = 11/341 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + T++ G +++ + + E S+ LA P + Sbjct: 4 IDRYLLRNLAVATVFVTAGLSAAIWLTQSLRLVEMVVE-GGASLGIFFRLALLTFPTFLS 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I+P L + + L SELV+ RA G+S L P ++ + ++ + + Sbjct: 63 LILPVGLLAAVLFTYNRLIMDSELVVMRAAGLSPMALARPALILAAVVALLCYTLTLFAG 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + ++ + L Q + + + + + + + Sbjct: 123 PAAQRELVRLRQAVRSDVSAVLLREGTFNDVGTGLTVYVRERGREGALSGLLIHDLRSPG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDGFQK 239 + R V + + ++ + ++ T+++ Sbjct: 183 VATTVVAERGRLVEVDDVP-HVVVFNGTQIKFHQDDGRTEWLEFARYTVDLQALRKELGP 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL--IAASVSLE 297 + RS +++ F RAE + + PL+ +A T +AA + E Sbjct: 242 RWIEPRERSLRDLVNLTDDPLDRQFFGRLRAE--LHSRLATPLLPLAFTAVGLAALLPGE 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 FSR Q R I + + + ++ I GK+ L P+ Sbjct: 300 FSRRGQGRRIALAAVGALVLQSAVLGISNLVGKNPALTPLL 340 >gi|227327171|ref|ZP_03831195.1| putative permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 371 Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 123/353 (34%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ L L +++ F L I + + L VP ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVISLLGLGVPEMV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ LL +V ++ I + + + Sbjct: 61 QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + K N + +F+G K H++ + Sbjct: 121 SPWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFEHVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + L Y+ + D T + G Q + Sbjct: 181 GNARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVT 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + A +F++ + + + ++ M ++ +S+ R Sbjct: 241 LNNSDVQQM-------DMQTLWHSDAHDARAEFHWRLTLIISVLIMAMMVVPLSVVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + + ++S G + P+ + + +++++ Sbjct: 294 GRV-LSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLTYFGIAVML 345 >gi|46580072|ref|YP_010880.1| permease [Desulfovibrio vulgaris str. Hildenborough] gi|120602470|ref|YP_966870.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|46449488|gb|AAS96139.1| permease, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562699|gb|ABM28443.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris DP4] gi|311233929|gb|ADP86783.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris RCH1] Length = 380 Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 121/356 (33%), Gaps = 11/356 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 FK + L L + L+ + ++ + ++ +L VP + ++P Sbjct: 1 MFKELVSIFLLCLGALLSLILIGRGL-QLRELFLGLDLGLTDATLLFLYLVPFFMLLVVP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 ++ + F ++ ELV +A G+SI+Q++ +V +L ++ + + G Sbjct: 60 VACMLSVFLTFLRMSTDRELVALKAGGVSIYQMMAAPLVFCVLCAGLSLSISLHWLSWGM 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDFTSITIDK 186 I + + + + Q I ED + Sbjct: 120 GNFRATIMEIANTRARIVIQPGVFNQDIPGLTLFARQVDPATGNLRQVIVEDRSRPGSTL 179 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQ-----YGRIPIDKNSTTLNIPIKMDGFQKFS 241 A + L+ Y+ + + S L++ G + Sbjct: 180 TIVAPEGTTATDEVRGEILFHLRDGRIYKADGENVSVLGFSEYSVRLDLDKLFKGLELGE 239 Query: 242 EQFASRSFYEII--KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + S+ ++ + + + + + + +P + + + A ++ F Sbjct: 240 IKPKEMSWRQLAGLDLNRYEAEMGERYVRKVLVEVHKRWALPAACIVLGIFALPLACAFE 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + ++ VA + + Y+++++ S G++G + PV P +L + + L Sbjct: 300 -GLRRQLGVALALVMFLVYYSMLSLGLSTGEAGTVPPVVGLWAPNVLFLVAGLYGL 354 >gi|300905894|ref|ZP_07123627.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|301304160|ref|ZP_07210276.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|300402363|gb|EFJ85901.1| hypothetical protein HMPREF9536_03886 [Escherichia coli MS 84-1] gi|300840573|gb|EFK68333.1| hypothetical protein HMPREF9347_02760 [Escherichia coli MS 124-1] gi|315256878|gb|EFU36846.1| putative permease [Escherichia coli MS 85-1] Length = 344 Score = 94.4 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 112/356 (31%), Gaps = 17/356 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIKDDKTWVLHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETG----------------QPILTLAMILLAVPFTFTAPRS 283 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +A G+ G + + IM + G L AL + + +++ ++ Sbjct: 284 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYW 339 >gi|237744434|ref|ZP_04574915.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229431663|gb|EEO41875.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 359 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 107/344 (31%), Gaps = 3/344 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVAMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF + + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSAGMSIRDILKPILAIAIGAAIFIIFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + I++ + F Sbjct: 120 SIIPRSFIKLKYVGTKIAYENPVFQLKEKTFV-DNLDGYSIYVDKVDSDGKAKNIIGFEK 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + VK + V + + N + FQ+ S Sbjct: 179 SKDKSKFPLVLTGEEAFWKDSAIIVKESQFVSFDETGKKNLIGTFDENRIVLKPNFQELS 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I + + K + + + + + + V + +I +SL R Sbjct: 239 IKIKDVEALSITELIRGLKKVEATEVIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHRI 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 ++ + + F + + +G L P A P + Sbjct: 299 SKKYSFI-LAMIIVFAYIIFLNVGIVMATAGKLNPFIATWTPNV 341 >gi|320335817|ref|YP_004172528.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319757106|gb|ADV68863.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 366 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 125/354 (35%), Gaps = 7/354 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY L + L+ M+ V V L E+ + S + A L A ++P I+ Sbjct: 10 DRYVMAEILPLLVAGLVVVMLAVLVGALLEVIAPLLAK-GASPALVARLVALQLPEAIKI 68 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P L ++ L+ +E+ + A G++ +L P ++ + + + ++ + Sbjct: 69 GLPVGFLFATLLGLSRLSSDAEIKAALAGGVAPGRLFLPVLLMGVGVTVAAFVIGETLGP 128 Query: 126 SGEKIGIDLIQQWKDNGDKQK--SDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + +Q + + ++ + + + + + Sbjct: 129 RAKTESLSVQRQIVLDNPRVLGLDQPGLILRDALNRAISVTRVRPGGVLEGVRVVALRES 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + I R+ + + +++ + + + + K S+ Sbjct: 189 GGPSSIITAREGHLRDSNVLELLDGQRITYQDGRPVTVIRFRRGELPVQDLQASFKTSDA 248 Query: 244 FASR--SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ K+ + + T PL +AM A +++L RS Sbjct: 249 PKPIDTPLPQLWAKVQT-YAQQHVNAPQETTALQRKFAEPLAALAMGFFAVALALFTFRS 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + + F Y ++ + G+SG L PV AA P +L + +++L Sbjct: 308 G-LNVGLVWVLLLTFAYYASWSVFRVMGESGALPPVVAAWTPDVLYLVAGLVLL 360 >gi|253991457|ref|YP_003042813.1| inner membrane protein yjgp [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782907|emb|CAQ86072.1| inner membrane protein yjgp [Photorhabdus asymbiotica] Length = 366 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 126/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L EI N + L VP + Sbjct: 2 IIIRYLVRETLKSQVAILFILLLIFFCQRLVEILG-AAVEGNVPANLVISLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ L+ ++ ++L + + + Sbjct: 61 QLILPLSLFLGVLMTFSKLYTESEITVMHACGLGKRVLVVSALILALLTSALAAVNVIWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K ++ + N + ++ ++IG+ +++ Sbjct: 121 MPWSSKYQEQVLADARANPSLAAIMEGKFKPSNDGNLVLYIGSVHGDKFKNVFLAQLRPV 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +++ ++ + + K L Y+ + D T N + G Q Sbjct: 181 DNQRPSVVISDGGHMVERPDGKQVVILNHGTRYEGTAMLRDFRITEFNDYQAVVGHQASV 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 I + ++K + F++ + + L ++ M ++ +S+ R Sbjct: 241 VDGDKVEQKSIAQLWRDNDKDSRAE-------FHWRLTLVLSVLIMAMMVVPLSVVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + + ++S G G L P+ + L++++ Sbjct: 294 GRV-LSMLPAMLLYLIFFLLQSSLRSNGGKGKLDPLIWMWTVNGAYLMLALVL 345 >gi|162149095|ref|YP_001603556.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545162|ref|YP_002277391.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161787672|emb|CAP57268.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209532839|gb|ACI52776.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 398 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 107/358 (29%), Gaps = 12/358 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L G L+++ + + E S+ L + VP + Sbjct: 21 LDRYVLRQLLVALLATTGGLSALIWLTQSLHFVSLVVER-GLSLRVFIGLTSLLVPSFVA 79 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I+P T +V V+ L EL + RA G+S + + ++ + + + +++ I Sbjct: 80 VILPITTFIVVQFVYQRLAGDRELTVMRAAGLSPFFIARAGLLCATISVVSCMILNIWIV 139 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 Q ++ + +S + + I + Sbjct: 140 PLSFHAFKQYEFQIRNRMAAFMLQEGVFTPVSPTMTVYVRSRDRDGTLHGIVVEDDRQPD 199 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDGFQKF 240 + + R + +V L + R N T + G Q Sbjct: 200 NPSTVLAQRGTMLVVDNQP-RVVLYDGSRQEIDRKSGRLNVLTFSRNTIDLTSSRGDQAR 258 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE--F 298 S +E++ + + + + + P + ++ L F Sbjct: 259 FRDATEMSLHELLHP--DPQEVAPRDRGKFAVEAWRRLTAPFTAFSFAMVGLVAVLRGAF 316 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 SR A I S L + ++++ + + IL L+L Sbjct: 317 SRHGNIIRP-AVAILSVVSLLALSLMVQNLASRNT-SLIPLMWVEAILPGIACALMLF 372 >gi|254225899|ref|ZP_04919501.1| membrane protein, putative [Vibrio cholerae V51] gi|125621525|gb|EAZ49857.1| membrane protein, putative [Vibrio cholerae V51] Length = 334 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 108/338 (31%), Gaps = 7/338 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ D+ + + + + +Y +P + N + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A R + + +N + RA+ + + I + + + +T++ +S R + Sbjct: 241 SAERDWEALPTLSLLNN-----ADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + I + ++ KS + G L + Sbjct: 296 FAK-MGPAILIYLTYFLALSATKSAIEDGSLPVIIGLW 332 >gi|238897461|ref|YP_002923138.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465216|gb|ACQ66990.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 364 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 114/351 (32%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ +Y K LKT + L + F L I + + + L + Sbjct: 2 VITKYLIKEILKTQVAILFILSFIFFSQKLVTILDDIIN-HDIPAHLIFSLLGLGFAKMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P ++ + L SE++ A G+ +L+ +V + L +F + + Sbjct: 61 ELILPLSLFFALLMTYGKLYNESEIIAMYACGVGKTRLIKVALVLAALTSLFATINVFYF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + K +I + + N + + + +FI + + I+ Sbjct: 121 SPWSVKHEKKIINEERVNPGLSALVKGQFQSSPDGKIVLFIQDIQNKKFHKIFLAQRESN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ ++ L + + Sbjct: 181 HTQRPTVVVANSGYISAPAPGIQLLT-LNHGMNYEGIPPLGDFRITYFNHYQAVISRKSV 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + S ++ + ++ + + + +V M +A +S R + Sbjct: 240 TKNSNTAQQMSMSSLWE----ANDPDTRAELHWRLTLIVSVVIMAFMAVPLSQVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S + L P+ + L L+I++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSTLRSNAGNNRLDPLIWLWLVNGLYTILAIIL 345 >gi|256027205|ref|ZP_05441039.1| hypothetical protein PrD11_04296 [Fusobacterium sp. D11] gi|260494013|ref|ZP_05814144.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|289765182|ref|ZP_06524560.1| conserved hypothetical protein [Fusobacterium sp. D11] gi|260198159|gb|EEW95675.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33] gi|289716737|gb|EFD80749.1| conserved hypothetical protein [Fusobacterium sp. D11] Length = 359 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 107/344 (31%), Gaps = 3/344 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVAMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF V + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSAGMSIRDILKPILAIAIGAAIFIVFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + I++ + F Sbjct: 120 SIIPRSFIKLKYVGTKIAYENPVFQLKEKTFI-DNLDGYSIYVDKVDSDGKAKNIIGFEK 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + VK + V + + N + FQ+ S Sbjct: 179 SKDKSKFPLVLTGEEAFWKDSAIIVKESQFVSFDETGKKNLIGTFDENRIVLKPNFQELS 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I + + K + + + + + + V + +I +SL R Sbjct: 239 IKIKDVEALSITELIRGLKKIEATEVIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHRI 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 ++ + + F + + +G L P A P + Sbjct: 299 SKKYSFI-LAMIIVFAYIIFLNVGIVMATAGKLNPFIATWTPNV 341 >gi|296125361|ref|YP_003632613.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] gi|296017177|gb|ADG70414.1| permease YjgP/YjgQ family protein [Brachyspira murdochii DSM 12563] Length = 417 Score = 94.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 61/413 (14%), Positives = 123/413 (29%), Gaps = 59/413 (14%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I +Y + L +L VFVI L ++ + +P Sbjct: 1 MKKI-TKYIILETIGPFLAGIL-FFTFVFVIQLLPELIRLIMNNGAPLLMSLETFVYMLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I IP L+ +I+ + L+ +E+++ RA+G ++ P ++ +F++ Sbjct: 59 FNIAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGFFTFMFSLFFN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N I + LI + + + +IS+ I +++ Sbjct: 119 NVIMSESNYRYRALISYMVNIRPSIAVGKLEFTEISDMGFSIGAKYADDKSISNVVIYDK 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S T + A + L V + N T+ + ++ + Sbjct: 179 SDTKRVITAKYGLWKNNEANSQVVTLTLYDGVVQEMPNYGFVTNDYTVFDSMDINIIRNV 238 Query: 241 S------EQFASRSFYEIIKKMSFSNKSNIFH---------------------------- 266 S +EI+KK+ + + Sbjct: 239 STLTSHERGLREMPSWEILKKIKEAKSNANKSVDEQITGMINNSYNNVKNTGIDITSFSN 298 Query: 267 ----------------------NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 Y +FY I IP + M LI A + + RS + Sbjct: 299 EYIKTNSAELVSIREKAIEESVPYFYYVEFYKFISIPAACLFMVLIGAPLGIVGKRSGK- 357 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + Y +IT + + P+ A P I+ + +++ Sbjct: 358 GFGFGISVIVVVIYYLLITAAELLAGGKKVPPILAMWFPNIVLAIMGGFFMVR 410 >gi|328948913|ref|YP_004366250.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449237|gb|AEB14953.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 356 Score = 94.0 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 120/354 (33%), Gaps = 10/354 (2%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y K + + ++ ++++ + DL N S A++ +P + + Sbjct: 6 YMLKRFFPVFIGAVMFFVLVLCLTDLFMNLWNYISK-NVSSRDVALILIYYIPKAVWYAV 64 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P L + + +EL+ A GIS+++ P + ++ + + + I Sbjct: 65 PIAMLFATAYMLSDFYARNELLAVFASGISLFKFSVPLLTVAVAMSFALFIFEDNIVVPS 124 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 L + + I I ++ A + + + Sbjct: 125 FSKKTQLQESVLSKEKSLNNSKIV---IMAEGGNVIYKADFFNNKAESLSKLYVLFRTED 181 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID----KNSTTLNIPIKMDGFQKFSEQ 243 K A A N+ KL+ VEY++ + + + F+ + Sbjct: 182 KKPDAVVYAQKAFWKNNSWKLENAVEYKFQDENFLACVLEKRLEERLLEPPETFRNNTIS 241 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + E + + K+ + ++ +Y P ++ + +A +S +R N Sbjct: 242 VERVNTKEAREYIEHLEKAGLPSAEE-KSVYYKKYSFPFVVFIVVFLAIGLS-GKTRKNV 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +A I + + Y + K + P+ A PV+L I +S ++L Sbjct: 300 LLVSLAMSITAVVLFYVFQMVTMLMAKFQAIPPLFGAWSPVVLFIIISCVLLKY 353 >gi|163746448|ref|ZP_02153806.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] gi|161380333|gb|EDQ04744.1| hypothetical protein OIHEL45_13625 [Oceanibulbus indolifex HEL-45] Length = 377 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 115/360 (31%), Gaps = 13/360 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY L +F L + L ++ + +++ S A +P +I Sbjct: 4 IDRYILSQLLVMFGFFALVLVALFWINRAVVLFDRLIG-DGQSALVFLEFTALGLPKLIV 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P T ++ V ++ SEL + +A G W+L P V + +G+ + + + Sbjct: 63 TVLPIATFAASVYVTNRMSGESELTVLQAAGSGPWRLARPVFVFGLCVGLMMTALSHFLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK------ILPENHIWED 178 + + N Q ++ S+ + + D Sbjct: 123 PMAQGQLKQREAEISRNLTAQLLTEGTFLHPSDEVTFYTRAIDNDGVLRDVFLSDRRKAD 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 I + + D I+ N + + + + +I + Sbjct: 183 EGVIYTAAEAYLARNGDNTTLIMLNGMAQRLDTEQNRL--ATAKFRDFSFDISPLVSTDD 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSL 296 + +S +++ + + + + PL + +I + + Sbjct: 241 ATDQSVSSMVTPDLLWDWAGLAAQLDTAPGIIAEELHSRLAQPLFCIVAAMIGFATLILG 300 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 FSR R V + T++ ++ L P+ A +P ++ L++ +L Sbjct: 301 GFSRFGVWREAVIAFGLLIAIDGLRGTLVVQIRETAALWPL--AYLPSLIGAVLTLAMLW 358 >gi|209964085|ref|YP_002297000.1| predicted permease YjgP [Rhodospirillum centenum SW] gi|209957551|gb|ACI98187.1| predicted permease YjgP [Rhodospirillum centenum SW] Length = 414 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 108/362 (29%), Gaps = 7/362 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY K L+ M+ + + + + + + +AA VP + Sbjct: 22 LIDRYILTETAKPLALSLVVVMLALLLERILRLFDLLANHGG-PFQLVLRMAANLVPHYL 80 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P + VV +EL ++ G+S+ ++ PF+ L +F+VL+ I Sbjct: 81 GLALPAAFFISMFVVVARFGDENELDALQSSGLSVPRITRPFLWLGTGLMVFSVLLFGFI 140 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-----ISNPQQDIFIGAKKILPENHIWED 178 + + ++ G D Sbjct: 141 QPYSRYAYQAIHYAVVNAAWDATVPQSAFVDAGQGVTITADMVDPTGRNLERVFVQQLRD 200 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 ++ + D I+ ++ + TL+ ++ Sbjct: 201 GEEWVTTAESGRLGVSDDRKRILLTLDNGVQVRTRPDATVEVVRFGRLTLDREFTLEAPP 260 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + R + + E +F+ +V + L M L+A + + Sbjct: 261 FRPRGGSERELTLVELWQEMHQPITLVPRGTLEAEFHARLVRAVSLPLMPLLALPMGMAA 320 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + +A + + I + +S G + +P ++ L + + Sbjct: 321 KR-ARRGLGIALAAAILVLYHHSIQMGESLADIGRVPAALGIWVPFVVFALLCGWLFYRT 379 Query: 359 ED 360 +D Sbjct: 380 QD 381 >gi|332297891|ref|YP_004439813.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] gi|332180994|gb|AEE16682.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] Length = 366 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 120/356 (33%), Gaps = 10/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L Y ++ ++ + L +++ +++L Q + + VP + Sbjct: 12 TLLSYLYRRFMPVFIGALSFFSLVLILVELLMNLWQFISAQ-VPAADIVRVMLLYVPKTV 70 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P L + V + +EL A G+S+++ P +V S++L F + + Sbjct: 71 SFALPLAILFASSYVLSDFYAKNELTAVFASGVSLFRFTLPLLVFSVVLSAFMFFFEDRV 130 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +L Q+ + + +D I + + A + ++ Sbjct: 131 VVPAYAQKTELQQKLLNQEKSKNNDRIVVIAERGA---VVYKADFYDDQASRLFTLYAVV 187 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMDGFQK 239 + + AD A+ L V+Y + T + + F+ Sbjct: 188 RNGDKSLRAVLRADSAVWNGSSWTLSGAVQYTMRGDTLIAEDPDPEITALLTEPPETFRN 247 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + E ++ ++ + Y+ +V + + + + Sbjct: 248 NTVSVETVTASEARSYITHLRRAGLPTAE--ALSQYYKKFSFPFVVFIVVFLSVGLSGKT 305 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R N I + I + Y + K G + P+A A PVIL I LS ++L Sbjct: 306 RKNVLLISLVLCIGAAVAFYVTQMVTMLLAKFGYISPLAGAWFPVILFIFLSGVLL 361 >gi|170746990|ref|YP_001753250.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] gi|170653512|gb|ACB22567.1| permease YjgP/YjgQ family protein [Methylobacterium radiotolerans JCM 2831] Length = 386 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 119/359 (33%), Gaps = 10/359 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ L TL L+G +++ + + ++ + +P ++ Sbjct: 4 IERYIFRIALGATLACLIGLTGTIWLTQALRELDLVTAK-GQTLLVFLFVTGLSLPTLVV 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I P + I LN SEL++ A G+ LL PF+ ++ + ++ + Sbjct: 63 VIAPVALFIGTIYALNKLNGDSELIVMSAAGMPPRSLLRPFLTLALFVSFLVGFLVVVVM 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + D+I + + + + Q+ N F ++ Sbjct: 123 PASFQELRDVITRVRGDFIANVVKEGQFTQLDNGITFHFRERGPGGTLKGLFIQDRREAG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDGFQK 239 K + R +A + + L+ +Q R D T+++ Sbjct: 183 KTKVYLAERGNAV-DVDGQSYLILENGSVHQQQRESRDSSILTFERYTIDLAAFAPPDSD 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + RS +++ + R + + + L +A+ IA + +L Sbjct: 242 TIYKPRERSTAQLL-FPDTTEGYYKLQKGRFRAELHDRLSACLYPLALVFIAFA-ALGDP 299 Query: 300 RSNQPRIIVAY-GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ + VA G + I + V A ++ I LS L++ Sbjct: 300 RTTRQGRGVAIAGAIVAVVALRIGGFAAVSAAARSPAAVLAVYSVPLVAILLSSLLIFY 358 >gi|241761653|ref|ZP_04759740.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260754018|ref|YP_003226911.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856464|ref|YP_163128.2| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|241373961|gb|EER63494.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553381|gb|ACV76327.1| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775468|gb|AAV90017.2| permease YjgP/YjgQ family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 403 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 117/355 (32%), Gaps = 12/355 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + + L+ + +L+ + + ++ + + +S + A +P + Sbjct: 7 IDRYLIRLITVPLVTTLIVSAMLMVLDKMLKLFDFVANQGG-PVSVVWRMLANMLPEYMS 65 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IP + ++ F L SEL + RA+GIS +LL + + + + ++ I Sbjct: 66 LGIPIGLTLGILLAFRKLALQSELDVFRAVGISYSRLLRIPYIFAFFFALVNLAIVGYIE 125 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 DL + + + + ++ G++ + Sbjct: 126 PYSHYAYEDLRYELRSGALGAAIKVGEFTKLGTHMTLRVEGSQDSGRNLSGIFGTSENPE 185 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK---------MD 235 + + + + + V L ++ D + + ++ Sbjct: 186 NGQKLTVTADNGRFMPSDDPNVILLRLNHGLLIHNRPDFTTPRVLTFENHDMPIKLPAVE 245 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 F+ + E+ + + + +F +V + + ++A +++ Sbjct: 246 SFRGRDGNQQEMTLTELF-FILHQKHLPKKLRNQLQANLHFRLVEVATMFLLPMLALTLA 304 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + RS + V I + + ++ G G + PV +P IL L Sbjct: 305 IPPKRSTS-SLGVFLSILILVTDHKLNQYCQTIGGLGKINPVLMMWLPFILFSLL 358 >gi|226946453|ref|YP_002801526.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226721380|gb|ACO80551.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 357 Score = 93.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/358 (9%), Positives = 95/358 (26%), Gaps = 13/358 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + L L + + S + +V + Sbjct: 1 MLLIERYVISEARRPLLVMLGILTSIFAAYSAERYLGEAAN-GTLSPEVVFDIVVYKVMI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + L SE+ A G+S +L + ++ + + + Sbjct: 60 ALEVLVPVALYVSVALGLGRLYHDSEITAVAAAGMSPLRLYGAVAILALPIAVGVTALSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW-MQISNPQQDIFIGAKKILPENHIWEDFT 180 L Q+ K D + + N + + + F Sbjct: 120 YGRPWAYANAYQLEQESKTELDIDHLLAERFNINAENGRMILAERVDRATDSLQDVLIFD 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN-IPIKMDGFQK 239 + + V++ Y + I + + Sbjct: 180 GGESRTRLYRSQEARIADPDPDDPVVEMTNGTAYSLQHDGTQDKRIEFKRLNIHLQPLET 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 E + ++ ++ + + + + + L+A +S Sbjct: 240 NMESRRKAASWQTLEASAGLPEQAEL---------QWRESRGVSTFILALLAIPLSRTAP 290 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + ++ + Y I KS +G L + + + + ++++ Sbjct: 291 RRGRFATLLPVTAVYAVIFYA-GDICKSLVGNGSLPLTPGLWLVPLAMGLVLLALIVR 347 >gi|182413236|ref|YP_001818302.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] gi|177840450|gb|ACB74702.1| permease YjgP/YjgQ family protein [Opitutus terrae PB90-1] Length = 384 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 44/383 (11%), Positives = 103/383 (26%), Gaps = 26/383 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY FK L T + +V V ++ S+ A L T +PL Sbjct: 1 MNLLDRYLFKSVLFTCAAAVALFTFIVLVPNVLRDMLAYVLTGQLSLLVFARLVFTLLPL 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P L ++ L+ SE+ RA+G+SI +++ P ++ + + + + Sbjct: 61 ALSYALPMGMLTGVLLTLGRLSADSEVTAMRAVGLSIPRIVRPILLLAAMGSALGIYLNF 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI-------FIGAKKILPENH 174 +++ + + + Sbjct: 121 ESMPRARVEYERGFAAAIQANPLNLIVPKTFIRSFPGYVVYVGEKQGGIMRDFWLWELDA 180 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + + L + + E ++ Sbjct: 181 EGRVERFVRAASGRFDYDEPNNSLMLTLTQAKVESRAKENPERFEKPQLVASLGQWGPIQ 240 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSN------------------IFHNYRAETQFYF 276 +F + A + + F+ Sbjct: 241 LSLNRFFGRNAGIRMKQEWMTYGQLQAEGERLAAQPLPADAAEAKQARRTRMKLAIVFHD 300 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 I L + ++ LI + ++ SR A + + Y + ++K + P Sbjct: 301 KINTALAVFSLALIGVPLGIKVSRRETSA-NFAVAVGITLVYYLMTVVIKVLDRHPEYRP 359 Query: 337 VAAALIPVILTISLSILILLQKE 359 +P + I + ++ + E Sbjct: 360 DLLLWLPNFILIGFGLWLMARIE 382 >gi|119383653|ref|YP_914709.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] gi|119373420|gb|ABL69013.1| permease YjgP/YjgQ family protein [Paracoccus denitrificans PD1222] Length = 382 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 114/365 (31%), Gaps = 14/365 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP I RY ++ +F L + + ++ + Q+ + A +P Sbjct: 1 MPRI-DRYILSQFMTLFGFFALVLVSVYWINRAVSLFEQLIS-DGQTALVVLEFTALTLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L+I ++P + L+ SELV +A G+S W++ P +V +L+ + L++ Sbjct: 59 LVISVVLPIAAFAASAYGTNRLSSESELVAMQATGMSPWRMARPVLVFGVLVALMVALLV 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENH 174 + + D + N Q + E+ Sbjct: 119 HAVVPMARGRLADRQAEIAQNVTAQFLRAGAFQYPVRGVTLYIRDIAADGRLVDFFLEDA 178 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 D + + ++ + ++ V+ + + + ++ + Sbjct: 179 RNPDSQTTYTSTEALLVRTDEGPRLVMMQGMVQNLRHAGNRQSLSVTRFSELAYDLGTLI 238 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPL-MLVAMTLIAAS 293 D + + S ++ + RA + + + P VA L Sbjct: 239 DTGESRKRDLRAYSTLRLLDPDPELLAATGATRDRALAEAHERLAKPFQAPVAALLGFGM 298 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM--KSFGKSGILLPVAAALIPVILTISLS 351 + L V + + + ++ + T + G + + + ++ ++ Sbjct: 299 LLLGGFSRFGVWRQVVWAVVALIVVQFLSTAAENQVAGNASRWPLI---YVSPLVGAAIC 355 Query: 352 ILILL 356 +L Sbjct: 356 CAVLW 360 >gi|262274979|ref|ZP_06052790.1| putative permease [Grimontia hollisae CIP 101886] gi|262221542|gb|EEY72856.1| putative permease [Grimontia hollisae CIP 101886] Length = 366 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 121/354 (34%), Gaps = 9/354 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +KT L L ++ F + + + L +P + Sbjct: 2 IIVRYLIRETVKTQLAVLFVLFLVFFSQKFIRVLANATD-GSIPGGDVLTLVGLYMPSMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +I+ G + Sbjct: 61 MLMLPLSLYIGILITFGRLYAESEITVMNATGIGNKFLIRAALYLAIITGSVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKIL--PENHIWEDFTS 181 + +++ + + + + Q +++ + ++ Sbjct: 121 TPWANDKEVKVMESLEADTGLELLVQGKIQTTPDGQAVVYVNDITGDGKDLHKVFIAQPV 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ + ++ + + + L +Y +P + T + + Sbjct: 181 PRGTLRPNVVVAEKGFISELPDGRQVLDLNNGIRYEGVPTLLDYTVTDYENYQVLIGQRE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +R + + ++ + + RA+ + + I + L + MT+I +S R Sbjct: 241 VRQKNRDWDAMPTQILVNE-----SSPRAQAELQWRISLVLCIPLMTMIVVPLSAVNPRQ 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + + I+ KS + G L ++ + ++++++ Sbjct: 296 GRFAK-LFPAVLIYLAYFLSISAAKSAVEEGKLPAEIGLWSVNLIALLVALMLI 348 >gi|294670274|ref|ZP_06735167.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308011|gb|EFE49254.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 348 Score = 93.2 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 105/312 (33%), Gaps = 12/312 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY K TTLY + + L D+ +GE Y+ + ++P Sbjct: 3 LIARYLIKQLSITTLYAMFALLALYSFFDIVAEVGGVGEGG-YTGIKMMQYVLLQIPDHA 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q++P L+ ++ L SE+ + + G+S ++ + ++ T L+ + Sbjct: 62 YQMMPLAVLIGGLIALSQLASNSEMTVIKTSGMSTKNIIAILLGFGLIFAAATALLGESV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + + +L NG W++ N ++ + + + Sbjct: 122 APAANRYAQNLKTT-AKNGKISTGAEGLWIKEQNNIINV-----REMLPDQSLRGIKVFR 175 Query: 184 IDKKNKIIHRKDADLAII-YNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQK 239 D+ K+ A+ A+I + KL V + I+ Sbjct: 176 HDQNFKLAESWQAESAVIAADGGWKLANVRRSILDGDRVRTEKHDGEYWQAGIRGSLLDV 235 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S + + N + +++ ++ P+ V M L+A + + + + Sbjct: 236 LLVNPNQMSLTALTAYIKHLED-NKQQADNYKIEWWRKLMYPVATVVMALVALAFTPQST 294 Query: 300 RSNQPRIIVAYG 311 R + + Sbjct: 295 RHGNMGLKLLPA 306 >gi|300870020|ref|YP_003784891.1| putative permease [Brachyspira pilosicoli 95/1000] gi|300687719|gb|ADK30390.1| putative permease, YjgP/YjgQ family [Brachyspira pilosicoli 95/1000] Length = 356 Score = 93.2 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 115/354 (32%), Gaps = 2/354 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L Y K +L + L+ +ILV + DL+ + E P ++ A R P Sbjct: 1 MKKLNSYLLKEFLSMFVGSLILFVILVTIADLSSKLSYYTEHPE-NMKYFITYHAARTPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P + + V + E++ + GIS+++ +P + I L + + Sbjct: 60 NLYYLFPIALMFSSTYVLGTFVKNKEMLAVQNSGISLFKFSSPIFIIVIALCLGLIGFWQ 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A KI + + + + + + +N I + Sbjct: 120 FVAAPMNKISFEANDLGRGHKKGEYTGSLNIFGANNYIYFIENFNFNDNYLTNTVIVKLK 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +I + + E+ + K T + + + Sbjct: 180 EDGAIDMRISSPSVRWNDNEKKWYAETGILAEFTDKKNISVKEITNYPLDVLERPEHFMN 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 K + ET F++ I + L+A+ S +FS Sbjct: 240 RPALDSMSLTEEMHWIKLRKEVNLNTNTLETDFHYRISYCFSGFIIVLLASLFS-KFSTQ 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + I + Y+I+ + +S G G + P AA +P I+ L L Sbjct: 299 SVLVVSLVMVIMVALVYYSILMMFRSMGDGGNMNPFIAAWMPNIIFAGLCFLAF 352 >gi|291296584|ref|YP_003507982.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471543|gb|ADD28962.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 377 Score = 93.2 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 107/371 (28%), Gaps = 24/371 (6%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L+ L + + +L + + +S A +VP Sbjct: 4 LDRYILREAWPVFLFGLALYVGFGLISNL---LPRAQWMGTAELSSILKWLALQVPYATV 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q +P L+ ++ F L R +EL++ +A GIS+ + PF++G +LL F++ + + Sbjct: 61 QAMPIAGLLAVMLAFGRLARENELLVMQAGGISVLRTARPFLLGGLLLSGFSLALSEWVV 120 Query: 125 TSGEKI-GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + Q + + + + + + Sbjct: 121 PWANRATALVYWNELIPERTPQFNLVGRELTVGEYILRYEGFDPAKDEFQRVRLERWQNQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN------------------- 224 + I+ D Sbjct: 181 TMTVILAQTARLQGQRIVLRDYRVFTLDFAQLPLPEFASLEQAEAGLQQIFRAQNIGQPG 240 Query: 225 -STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 T+ + + + + + E + + I L Sbjct: 241 AELTVRLSRSREDLEVQYAGGGFEVPVPLSEWWRKLQDPRTPPRELREAKAQWHAAIALA 300 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 L + ++ ++ + R+ P + + Y + K SG L P AA Sbjct: 301 LANLMVLVLALPVAVRRATSPGTALGLALVLTIAYYVAFSAGKVLALSGPLPPELAAWGA 360 Query: 344 VILTISLSILI 354 +L +++ + Sbjct: 361 NLLGVAVGYGL 371 >gi|308272621|emb|CBX29225.1| hypothetical protein N47_J02060 [uncultured Desulfobacterium sp.] Length = 409 Score = 93.2 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 118/366 (32%), Gaps = 14/366 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY FK L L L + + + N S+ + ++ +P + Sbjct: 21 IVSRYLFKEILSPFAINTLFFTFLFLMAKIL-FITNLVVNYNMSLPKIGLMLLYIIPNFL 79 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IP ++ ++ F + +E++ + GISI+ LL P ++ + I T L+ Sbjct: 80 VFVIPMSVMMAILLTFLRFSSDNEIIALKTGGISIYGLLPPVLIFCFIGCILTFLISLYA 139 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI---------GAKKILPENH 174 G L + + + + + Sbjct: 140 IPWGRLSIEKLTMEIAQSNFEIGLKERTFNDNFKDIMLYVNKVDLKKDELIDVFVEDGRS 199 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 T I + + +Y+ + I D L++ Sbjct: 200 EDMASTIIAPKGVLLFEENRLSFRLRLYDGVINQVNTKNKSVNSIGFDTYDINLDLKNAF 259 Query: 235 DGFQKF--SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 +K + FYE++ + N + A + + +P + +++ Sbjct: 260 SEMEKTGQRKNEKKMYFYELLDYIDSFKIKNSRYYN-ALFELHKKFSVPFACFVLGILSV 318 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 ++ +S + G+ + Y I+++ + G++G P P IL S+ I Sbjct: 319 ALG-TQLKSATRSFGLGLGLIFFLLYYLILSVGYALGETGFYPPFIGMWAPNILIGSIGI 377 Query: 353 LILLQK 358 + ++ Sbjct: 378 YLFIRT 383 >gi|19704366|ref|NP_603928.1| hypothetical protein FN1031 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327426|ref|ZP_06869973.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714618|gb|AAL95227.1| Hypothetical membrane-spanning protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155439|gb|EFG96209.1| YjgP/YjgQ family permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 359 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 104/343 (30%), Gaps = 3/343 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF V + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIVFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + + I++ + F Sbjct: 120 SIIPRSFIKLKYVGTKIAYENPVFQLKEKTFI-DNLDEYSIYVDEVSSDGKAKNIIAFEK 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + +K + V + + + FQ + Sbjct: 179 PEDKNKFPMVLTGEEAFWKDSAIIIKESQFVSFDEKGKKNLVGTFDEKRVVLTAYFQDLN 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + II + K + + + + + + V + +I +SL R Sbjct: 239 IKIKDVEALSIIDLIKGLKKVEATEVIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHRI 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 ++ + F + I +G L P A P Sbjct: 299 SKK-YSFVLAMIIVFAYIIFLNIGIVMATAGKLNPFIATWTPN 340 >gi|34763639|ref|ZP_00144568.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294785395|ref|ZP_06750683.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] gi|27886692|gb|EAA23836.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|294487109|gb|EFG34471.1| permease, YjgP/YjgQ family [Fusobacterium sp. 3_1_27] Length = 359 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 105/344 (30%), Gaps = 3/344 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF + + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + + I++ + F Sbjct: 120 SIIPRSFIKLKYVGAKIAYENPVFQLKEKTFI-DNLDEYSIYVDKVSSDGKAKNIIAFEK 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + +K + V + + + FQ + Sbjct: 179 PEDKNKFPMVLTGEEAFWKDSAIILKESQFVSFDETGKKNLVGTFDEKKVVLTAYFQDLN 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I + K + + + + + + + + +I +SL R Sbjct: 239 IKIKDVEALSITDLIKGIKKVEATEVIKYKIEIFRKLALVFSTIPLAVIGFCLSLGHHRI 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 ++ + + F + I +G L P A P + Sbjct: 299 SKKYSFI-LAMIIVFAYIIFLNIGIVMATAGKLNPFIATWTPNV 341 >gi|254446201|ref|ZP_05059677.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] gi|198260509|gb|EDY84817.1| putative permease, YjgP/YjgQ family [Verrucomicrobiae bacterium DG1235] Length = 392 Score = 92.8 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 47/382 (12%), Positives = 113/382 (29%), Gaps = 25/382 (6%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + RY T+L +L +V + + M ++ L +P + Sbjct: 2 LFHRYILWNVAVTSLGAILMFAFIVLLGEFMRDLFGMLAEGQVTVGTCFRLVGLLLPYVF 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P L ++ L+ E+V RA G+SI +L + V +IL + ++ V Sbjct: 62 VHALPMGLLTGIMISMGRLSSQGEVVALRASGVSIARLASSVVFLAILGVVTSIAVNFEF 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN---------PQQDIFIGAKKILPENH 174 I + G + +++ + L + Sbjct: 122 GPRAINAYRGEIAEAVRTGPLRFIIPRKFVKDFPGFVVYAGAKEDDVLRELWIWKLDDGG 181 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + + L + K+ + I + + + + + Sbjct: 182 RTTSLIKAESGTLELDEYEQTLRLLLRSGSIAKMDSKDPEDFSEIRGELSFGSFPLEFPI 241 Query: 235 DGFQKFSEQFASR------SFYEIIKKMSFSNKSNIFHNYRAE---------TQFYFLIV 279 D + + +++ I R E F+ + Sbjct: 242 DSILEKKPRRVKMYWLVGGELMSEWRRLDKLLSGEIDSEVRREAARMLAEAKMAFHEKLA 301 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 + +++ L+A + + R + + G + Y + ++ G G+ P Sbjct: 302 AGVSVLSFALMAIPLGISVQRKETSA-NLGIALGLGVLYYLMTALIGWGGGQGMPFPHLL 360 Query: 340 ALIPVILTISLSILILLQKEDG 361 IP L + + ++ + + G Sbjct: 361 YWIPNFLLQGIGLWLIYRLDHG 382 >gi|42526554|ref|NP_971652.1| hypothetical protein TDE1044 [Treponema denticola ATCC 35405] gi|41816747|gb|AAS11533.1| membrane protein, putative [Treponema denticola ATCC 35405] Length = 357 Score = 92.8 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 114/358 (31%), Gaps = 10/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K ++ T + +L ++L+ + DL + + +P Sbjct: 1 MKLLQRYLLKLFIPTFVVAMLFFILLLQLGDLFANIVAYLQ-NGAQFKDIVKVMWLYIPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +P L NL +EL + GIS+ + P +V + + + Sbjct: 60 CIAYSVPLAILFAGSYTMGNLYAQNELTSIFSAGISLGRFTLPLLVLGFFFSVGMIFFED 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + L ++ + + + + EN + Sbjct: 120 NVVIKYFYEKTQLSKKLLQEEESLDTQDLVILSELGKIVYTADY---FNAENQTLANAYI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN----IPIKMDGF 237 I D+ + + + D+ Y++ + + F Sbjct: 177 IVRDEDGNLSLVIKSSHMVWNEDRWTTDSAEVYRFDEKNSVSCLNNIPDNIILSEPPANF 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 QK E + ++ K+ + Y A ++++ P + + + S+ + Sbjct: 237 QKNLSSVDEMRISEAKEFIAALKKNGLP-YYEALSKYHRRFSFPFTIFIVLFFSISLGGK 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 F ++ + + + + + Y + K + P+A A P+ + LSI +L Sbjct: 296 FKKNI-LLMSILFSLGIATLFYVTEMVTMLSAKWEYISPLAGAWTPIFIFSILSIFLL 352 >gi|300114327|ref|YP_003760902.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] gi|299540264|gb|ADJ28581.1| permease YjgP/YjgQ family protein [Nitrosococcus watsonii C-113] Length = 383 Score = 92.5 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 35/358 (9%), Positives = 102/358 (28%), Gaps = 9/358 (2%) Query: 1 MPG--ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I+ RY K L +++ I +Q + L+ Sbjct: 1 MLKFLIVDRYILKELSLNATAITLVLLLIFGGIRFIRFLSQATK-GKVPGEAILALSGYE 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 + ++P + + ++ + +E++ A G+S LL + ++L I Sbjct: 60 AIGALVLLLPLASFLAVLLALGRMGADNEVIALFACGVSRRHLLRVVLTFGLVLAIGVGS 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + + + G L QQ + + + + Q+ + + Sbjct: 120 ISLYLGPAASAEGYRLKQQALLAAETSGLVAGNFKESQHGQRVFYAESLTEDGLGMKNVF 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 +K L Y+Y + + Sbjct: 180 IQVWEPTQKTLFRAATGHLQTDEGTGDKHLILEDGYRYDLMGEEVGIRIFRFERH----- 234 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + I + + + + + I +P+ + + ++A ++ Sbjct: 235 GILVKKGGMQEFRIRHQTLPTLTLWEMGAPKDIAEIQWRISMPITTLLLVMLAVPLARSG 294 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + + + ++ I +++ + ++ L + + ++ L Sbjct: 295 PRQGRYA-GLLPAVLVYVIYSNMLGIARNWVEHEVIPAFLGLWWIHALMLLVVLISLW 351 >gi|325278209|ref|ZP_08143702.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] gi|324096649|gb|EGB95002.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] Length = 371 Score = 92.5 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 112/349 (32%), Gaps = 17/349 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GVLDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+ + + + Sbjct: 61 QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK--------ILPENHI 175 A G +I Q + + + + + + + Sbjct: 121 APLGVAQVQQIIAQQDTLTEFDTLVPGRFQMLRDGSRVTYTEQLSDDRVKLGGVFISEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + + ++ N + L+ Y D + + + Sbjct: 181 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + +E+ R + + + R + + + +P+++ +TL+A +S Sbjct: 241 PKPEVAEEVTER------EAIPTLDLFGKTD-LRERAELQWRLSLPILVFVVTLLAVPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + I T++ ++ + G L Sbjct: 294 RVNPRQGR-FLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVH 341 >gi|153827727|ref|ZP_01980394.1| conserved permease [Vibrio cholerae MZO-2] gi|149737798|gb|EDM52703.1| conserved permease [Vibrio cholerae MZO-2] Length = 256 Score = 92.5 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 2/258 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++W Sbjct: 120 EWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + L ++V + D Sbjct: 180 NKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVV 238 Query: 241 SEQFASRSFYEIIKKMSF 258 + + S + + + Sbjct: 239 TVKPEELSLTGLSDYVHY 256 >gi|237741965|ref|ZP_04572446.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256845305|ref|ZP_05550763.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|229429613|gb|EEO39825.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|256718864|gb|EEU32419.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 359 Score = 92.5 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 105/344 (30%), Gaps = 3/344 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + + + + + + + S+ L + +P Sbjct: 1 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVK-GISVFDVLRLLSFYIPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q IP + ++ F +R SE V + G+SI +L P + +I IF + + Sbjct: 60 ILTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRDILKPILAIAIGASIFIIFLQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + ++ + + I++ + F Sbjct: 120 SIIPRSFIKLKYVGAKIAYENPVFQLKEKTFI-DNLDEYSIYVDKVSSDGKAKNIIAFEK 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + VK + V + + + FQ + Sbjct: 179 PEDKNKFPMVLTGEEAFWKDSAIIVKESQFVSFDETGKKNLIGTFDEKKVVLTAYFQDLN 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I + K + + + + + + V + +I +SL R Sbjct: 239 IKIKDVEALSITDLIKGIKKIEATEVIKYKIEIFRKLALVFSTVPLAVIGFCLSLGHHRI 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 ++ + + F + I +G L P A P + Sbjct: 299 SKKYSFI-LAMIIIFAYIIFLNIGIVMASAGKLNPFIATWTPNV 341 >gi|304311789|ref|YP_003811387.1| Predicted permease YjgP/YjgQ family [gamma proteobacterium HdN1] gi|301797522|emb|CBL45742.1| Predicted permease YjgP/YjgQ family [gamma proteobacterium HdN1] Length = 369 Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/351 (10%), Positives = 115/351 (32%), Gaps = 4/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L TTL ++++ + + + + + ++P + Sbjct: 2 IIYRYLSRQLLVTTLAVTGVLVLILMGGRFIKYLGGAAD-GVLTGALIFWVMLYKLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++ + + +E+V+ A G+S L+ ++ ++ + + N + Sbjct: 61 ELILPLGLFLGILLSYGRMYLENEMVVLEACGMSRGALVKHTLMPALCTALIVGFIANYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + K + + N +I + + Sbjct: 121 SPLCNTKAQTMLDEQKRKSALELLSPGQFHATRNAMTVTYIEDIDGKHKEMQNLFIVNYN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 KI + ++ + +V + R N + Sbjct: 181 QANPEKIEITRAKRGDYQIHEDTGARYLVMKEGYRFEGSAGMAKFNRTAF--DVYQLKLD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 E + + + + A + + + +P+++ + +A +S R + Sbjct: 239 PPRPLEIEGQYTLMSDAQLVLEGSLAARAELQWRMALPVLVPIIAYLAVILSKVNPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + +++ +K+ G + P + I L++ + Sbjct: 299 Y-MKLLPSIVLYLVYLSLLLAVKNKIAKGKMDPELSLWAVHIAFFLLAVFM 348 >gi|94987324|ref|YP_595257.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731573|emb|CAJ54936.1| predicted permeases [Lawsonia intracellularis PHE/MN1-00] Length = 384 Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 112/361 (31%), Gaps = 7/361 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L R F+ + + L+ + + I +L + VP Sbjct: 1 MIPLLQRQIFRESTYIFFLVVGALLTLIIINRAI-QMRDLFIGLKLEILDVLILFSYMVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L + +IP ++ + F +N EL+ +A GISI+Q+L + S + T+ + Sbjct: 60 LFLILVIPIACMLGVFLTFLRMNLDKELIALKASGISIYQMLPAPLAFSFFCTLLTLWIS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWED 178 G + + K + + E H + ED Sbjct: 120 LFWIAWGMEQFKTTLLDIARTKVKISIQPGVFNNNFPGFVLFARQVDPLSGELHQILLED 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + L Y S + Sbjct: 180 RSQKDRHLVILAPTGTIETNPTKGELIFNLTNGNIYTMSLNKTSFLSFDQYLVRIPLTTL 239 Query: 239 KFSEQFASRSFYEIIKK---MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + F E+ + ++ + + + + + + P +A+T+ A ++ Sbjct: 240 LKNINFNELRPKEMSWERLIKEYNITNTMQYQNKISVELHKRWAYPAACIALTIFALPLA 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + F ++ + + F+ Y +++ S G+SG + P +P IL L + + Sbjct: 300 IMFEGIHRQ-FGLILALIMFFIYYGLMSFGFSTGESGTIPPAIGLWLPNILFFLLGLYGI 358 Query: 356 L 356 Sbjct: 359 Y 359 >gi|297624270|ref|YP_003705704.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297165450|gb|ADI15161.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 353 Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 122/352 (34%), Gaps = 9/352 (2%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + L + L+ ID + N ++ A L ++PL + + Sbjct: 9 YLLRETAGLYLLGVAAF-CLLLSIDTLTVWAGYLIQQNATLGVIARLMLYQLPLFLHLSL 67 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P + ++ L + SEL + A+G+ LL P + +L+ + +L + G Sbjct: 68 PVAAVFAVLLATGRLAKDSELKAAYALGVPPLSLLWPLLGFGVLISVAALLNNGYLEPRG 127 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + +L+ + + ++ + + + + + + + + Sbjct: 128 QIAEDELVASFFNARPSAETQRDVSFRQ--EGGLYYAARIRADTFDRTRAELSGVLVYGD 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + ++ + L++V + G P + + TL ++ D S + Sbjct: 186 DGTLYSAPYGTWDSEVNTWTLEEVEVLREGEAPRLEPTLTLPFTLQADAGASLSA-AENL 244 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + E+ ++ ++ + + V LIA ++ L Sbjct: 245 TLSELYARIEAGRRAGQ-SVRGDLFNLHRRLADASSAVIFVLIAGALGLHL---RGRSAG 300 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI-LLQK 358 + I + + T+ +SF + G+L PV AA + + + + L++ Sbjct: 301 FGWTIVLLVCFFALWTLSESFFEQGVLSPVVAAWLTTGVVGLIGGALALVRL 352 >gi|330994315|ref|ZP_08318243.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] gi|329758782|gb|EGG75298.1| Lipopolysaccharide export system permease protein lptG [Gluconacetobacter sp. SXCC-1] Length = 369 Score = 92.5 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 119/356 (33%), Gaps = 6/356 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + + + + L+ ++ L E ++ + ++ A R+PL+ + Sbjct: 16 YLSREMMGKVFATAVIVVSLMEILSLLEQVTEIMHR-HLGLTGVLYYAVMRLPLLFCNAM 74 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P L+ ++ + ++E+ I RA G+S L+ F+ +I LGI LV + + Sbjct: 75 PIAVLIGALLALVQMTTSNEIAIMRAAGLSTPGLIKLFLPTTIALGILCGLVNDQVTPRT 134 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 E+ + + +L + ++ + K Sbjct: 135 EQALAQWWNVTTPGAIAEAHNYWVRSGNDLISIHFLGSGASVLGDVTVYHRDRQSLLQKV 194 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYG---RIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + L + + P + + + F Sbjct: 195 TTLDTARYVHGHWYGTPTRMLSVISPTRIDLLDVPPGQSIRLDWPDTLTPGYITQLTISF 254 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + ++ S + E I++PL M L+A V R+ Sbjct: 255 TQSISTMLDEEAGRLPSSQSPSFFLTEIL--GRIMLPLTFTVMLLLAVPVVYIPPRAGIR 312 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + + +G + ++++ G +G L + A + +++ I I +LL+ E+ Sbjct: 313 SWLPVWCLGAGLLFVVFQGLLRALGNAGTLPSLMAIFVGILIFILGVITVLLRIEE 368 >gi|261819786|ref|YP_003257892.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] gi|261603799|gb|ACX86285.1| permease YjgP/YjgQ family protein [Pectobacterium wasabiae WPP163] Length = 370 Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 125/352 (35%), Gaps = 10/352 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ L L +++ F L I + + L VP ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVISLLGLGVPEMV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ LL +V ++ GI + + + Sbjct: 61 QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTGIIATINVMWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + K N + +F+G K H++ + Sbjct: 121 SPWSSRHQEEVLAEAKANPGMAALVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYN-DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + ++ + V L Y+ + D T + G Q + Sbjct: 181 GNARPSVVVADRGHITNEEGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQAVTL 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + A +F++ + + L ++ M L+ +S+ R Sbjct: 241 NNSDVQQM-------DMRTLWNSDAHDARAEFHWRLTLILSVLIMALMVVPLSVVNPRQG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + + ++S G + P+ + ++ ++I++ Sbjct: 294 RV-LSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLMYFGIAIML 344 >gi|183219955|ref|YP_001837951.1| hypothetical protein LEPBI_I0537 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910079|ref|YP_001961634.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774755|gb|ABZ93056.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778377|gb|ABZ96675.1| Conserved hypothetical protein; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 378 Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 105/362 (29%), Gaps = 8/362 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY F + KT + L+ ++ + ++ + + S + +P Sbjct: 18 FRTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSK-VNQSHVYLHVLYSLPS 76 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ Q++ + V + ELV G+S +++ P + I++ + L Sbjct: 77 MVDQVVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPILFFGIVIWLVMTLFGQ 136 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K ++ + + ++ Sbjct: 137 IVVIPANKNAQIQFSIMAKGSNRLIDFVYQLHIKGKKGFYYVYWIDEKENTIKGGFNYFE 196 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDG 236 IT D I L E ++ T + P + Sbjct: 197 ITPDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSRTKYAEKTYDFPEDLAY 256 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 F K +F+E+ ++ I Q + +PLM + + A Sbjct: 257 FSKPIRNPEEMNFFELADEIQSRITKGIPFRN-VIVQQHMAFSMPLMSFVVVTLGALAGA 315 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + I + Y + + K+ ++G L I ++ + + + Sbjct: 316 ITKRSAGVA-SLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWITPVIFTTAAYYLYR 374 Query: 357 QK 358 + Sbjct: 375 KM 376 >gi|189425645|ref|YP_001952822.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] gi|189421904|gb|ACD96302.1| permease YjgP/YjgQ family protein [Geobacter lovleyi SZ] Length = 379 Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 106/343 (30%), Gaps = 4/343 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + + L +++ + + ++ + ++ L +P + Sbjct: 5 IINRYLMREIVGIFALGLTIFTLVLLMGRMVKLMEMVV-ANGVPLAEVLRLILLLLPSFL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L+ ++ F L+ +E+ + +A G+S+ LL P ++ + + T+ + Sbjct: 64 VLTIPMAFLLAVLLAFGRLSNDNEITVLKACGLSLGTLLPPVLLTAAAAALLTLFISVVA 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + + + S Sbjct: 124 VPWGNTGFKQMTMDVARKYAASAIRERIFRDDLPGIVLYVDQYDEARRTMQRVMIQDSRD 183 Query: 184 IDKKNKIIHRKDADLAIIYND--KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ I + + N ++ LK + + S + G Sbjct: 184 PERPLTIFAKSGLVSSDEVNGVLRILLKNGSIHTQHKNDYRLVSFGEYLLTAESGRSTPP 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +++ S S + + T+ + P ++A + L RS Sbjct: 244 VRTELDLGIGELQRGSRSPQLAPQARLKMATELHSRFAFPCATFVFAILALPLGLSNRRS 303 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + I + Y +++ +++ + G + P A +P Sbjct: 304 GK-GSGFTISILILLVYYVLLSFLRTLAEKGGIPPALAVWLPN 345 >gi|219871563|ref|YP_002475938.1| permease [Haemophilus parasuis SH0165] gi|219691767|gb|ACL32990.1| permease, inner membrane protein yjgP [Haemophilus parasuis SH0165] Length = 366 Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 110/351 (31%), Gaps = 9/351 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + + L +P + Sbjct: 2 ILSRYLTKEIFKSQIAILFILLVIFFCQQLVRVLSSAVS-GKVPTDLVLSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ SE+ + RA G+ L+ + SI V + + Sbjct: 61 QLMLPLSLFIALLLTLGRFYAESEITVMRACGVGQSLLVKAALFLSIFTTAVAVYNVFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++ + K N +M I + + ++++ Sbjct: 121 TPWAINKQSEMLAEAKANPRFAALAAGQFMSAGGYVLFIDNIKDNTINDIYVFQPEQQKK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + L Y+ D + + G+Q Sbjct: 181 NKPSVVVAKSGELQGLPNGDQMLNLTNSTRYEGTPQTADFRISHFDNYNAYLGYQDVDSD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K +S + A+ + + + + L + M L+A +S R + Sbjct: 241 EKLVQRADFQKLLSE-------TSPEAQAELQWRLALILSVPLMALLAVPMSSVNPRQGR 293 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + + + +KS G SG L + + + L L+ Sbjct: 294 FAKLLPALLLYLIYF-LLQSSLKSAGASGKLNVSLLMPMVSVAFLVLGTLL 343 >gi|114766153|ref|ZP_01445157.1| Predicted permease [Pelagibaca bermudensis HTCC2601] gi|114541613|gb|EAU44655.1| Predicted permease [Roseovarius sp. HTCC2601] Length = 371 Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 41/358 (11%), Positives = 125/358 (34%), Gaps = 15/358 (4%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + +F L +++ +V + +++ + S + +P +I ++P Sbjct: 1 MLSQLMVVFGFFALVLVMVYWVNASVSLFDELITDGH-SARIFLEFSLLSLPGVIALVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + V ++ SE+ + +A G+S W+L P +V +L+ + ++ + + + Sbjct: 60 MAAFGAAVYVTNRMSNESEMTVLQAGGLSPWRLGRPVLVFGVLIALMMSVLTHALVPASV 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 D + ++ + ++ P + + ++I + + + + S + + Sbjct: 120 AQLRDRESEISESVAARLLHEGTFLH---PARGVTFYIREITDDGELRDVYLSDRRNDQR 176 Query: 189 KIIHRKDADLAIIYNDKVKL-------KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + KL ++V + T +I + Sbjct: 177 TVTYTAETAYVTRDDGGPKLTMRSGLAQEVQTKDLTLSTTNFTDLTYDISGLITSGGSER 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLEFSR 300 + E++ + + + + +PL+ V LI A++ Sbjct: 237 RRARQIPTLELLTQTEAVAEEVNDSIGEVLEEAHNRFQMPLLCVVAALIGYAALMTGTFS 296 Query: 301 SNQPRIIVAYGIFSGFMLYTI-ITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + IF ++ + I + + P+ +P ++ +L+ ++L + Sbjct: 297 RFGVTKQIVGAIFLLVLVKLVESAITEPVRSTPAFWPL--VYLPSLVGFALAAVLLWR 352 >gi|325473492|gb|EGC76687.1| membrane protein [Treponema denticola F0402] Length = 357 Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 114/358 (31%), Gaps = 10/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K ++ T + +L ++L+ + DL + + +P Sbjct: 1 MRLLQRYLLKLFIPTFVVAMLFFVLLLQLGDLFANIVAYLQ-NGAQFKDIVKVMWLYIPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +P L NL +EL + GIS+ + P +V + + + Sbjct: 60 CIAYSVPLAILFAGSYTMGNLYAQNELTSIFSAGISLGRFTLPLLVLGFFFSVGMIFFED 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + L ++ + + + + EN + Sbjct: 120 NVVIKYFYEKTQLSKKLLQEEESLDTQDLVILSELGKIVYTADY---FNAENQTLANAYI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN----IPIKMDGF 237 I D+ + + + D+ Y++ + + F Sbjct: 177 IVRDEDGNLSLVIKSSHMVWNEDRWTTDSAEVYRFDEKNSVSCLNNIPDNIILSEPPANF 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 QK E + ++ K+ + Y A ++++ P + + + S+ + Sbjct: 237 QKNLSSVDEMRISEAKEFIAALKKNGLP-YYEALSKYHRRFSFPFTIFIVLFFSISLGGK 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 F ++ + + + + + Y + K + P+A A P+ + LS+ +L Sbjct: 296 FKKNI-LLMSILFSLGIATLFYVTEMVTMLSAKWEYISPLAGAWTPIFIFSILSVYLL 352 >gi|225619709|ref|YP_002720966.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] gi|225214528|gb|ACN83262.1| permease YjgP/YjgQ [Brachyspira hyodysenteriae WA1] Length = 417 Score = 92.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 57/413 (13%), Positives = 123/413 (29%), Gaps = 59/413 (14%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I +Y + L +L + FVI L ++ + + +P Sbjct: 1 MKKI-NKYIILETIGPFLAGILFFTFI-FVIQLLPELIRLIVNNGAPLFMSLEVFVYMLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I IP L+ +I+ + L+ +E+++ RA+G ++ P ++ + IF++ Sbjct: 59 FNIAITIPMSILMASIIGYGRLSSDNEIIVMRALGFPHMRIYMPIIILGVFTFIFSLFFN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N I + LI + + + I + I +++ Sbjct: 119 NVIMSESNYRYRALISYMVNIKPSIAVGKLEFSDIPDMGLSIGSKYADDTSMSNVVIYDR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPIKM 234 S T + A + L V + +S +NI + Sbjct: 179 SDTKRVITAKYGLWKNNEANAQVVTLTLYDGVVQEMPGYGFISNDYTVFDSMDINIVRNV 238 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH---------------------------- 266 ++I++K++ + Sbjct: 239 STLSSHERGLREMPAWKIMEKINQTKIDADKSVNEQINGMIVNAYNNIDTNAVSITSFSN 298 Query: 267 ----------------------NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 Y +F+ I IP + M LI A + + RS + Sbjct: 299 EYIQTNSAELTSLREKAMEEAVPYFYYVEFHKFISIPAACLFMVLIGAPLGIVGKRSGK- 357 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + Y +IT + + P+ A P I+ ++ ++++ Sbjct: 358 GFGFGLSVIVVVIYYLLITAAELIAGGKKVSPLIAMWFPNIVLAAMGSFLMIR 410 >gi|254460553|ref|ZP_05073969.1| permease YjgP/YjgQ family protein [Rhodobacterales bacterium HTCC2083] gi|206677142|gb|EDZ41629.1| permease YjgP/YjgQ family protein [Rhodobacteraceae bacterium HTCC2083] Length = 381 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 105/360 (29%), Gaps = 10/360 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY +F L + + ++ + +++ S A +P +I+ Sbjct: 8 FDRYVLSQLFVLFGFFSLVLVSVYWINRAVILFDRLI-ADGQPASVFLEFTALSLPNVIR 66 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P ++ V L SELV+ +A G S W+L P V+ ++G F +++ + Sbjct: 67 MVLPMSAFAASVYVTNRLASESELVVMQATGYSPWRLARPVVMFGFIVGTFMMVLTQYLV 126 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 S + + + Q +M + ++ Sbjct: 127 PSSLEQLRFRENEITGSLSSQLLREGEFMNPTKGVTFYIREITPEGVLKDVFLSDRRNEG 186 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKMDGFQKF 240 V + V + +I +D F Sbjct: 187 RTTTYSSVDGFLVNEPTGPKLVMVSGVTHTLNEDTRKLTKTKFTDFSYSISSLIDNPGSF 246 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSLEF 298 + E++ K + R + + P++ V LI S + F Sbjct: 247 YKSLNQYQTLELLLATDVVQKRSGQSTGRILEEAHSRFNQPILCVVAALIGFSTLLLGGF 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 SR R I+ + + + + L P+ A + ++ +L Sbjct: 307 SRFGVGRQIIGAILLLVMVKLVESIVTDPIRANAQLWPLVYAQS---VFGFGAVFTMLYL 363 >gi|328950000|ref|YP_004367335.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450324|gb|AEB11225.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 378 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 119/375 (31%), Gaps = 31/375 (8%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + G ++ V +I L+ + + L +VP ++ Sbjct: 4 LDRYILREAFPPFA---FGLLLYVGLILLSNLLGRAQWLVGVEFWGLVRWLWYQVPFVLN 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q +P L+ ++ + L+R +EL++ +A G+ + + V + +L ++ + + Sbjct: 61 QTLPVAVLLATLLAYGRLSRENELLVIQAGGLPLLRTARWLFVAAFVLVGVSLYMSETLI 120 Query: 125 TSGEKIGIDLIQQWKDNG-------------------------DKQKSDIIPWMQISNPQ 159 + L + + K + +++ + Sbjct: 121 PRANERAAVLWWDELTSKGNGLARLAGQDVPVGPYRLFFARYDYRTKEMVGVRLELWQGE 180 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI 219 I A + E + + D ++ V R Sbjct: 181 TLAVIFADRGRLEENRLRLVNFRQYTLDLTRLPLPDFASLEEAEQHLRRL-VRMQNVARD 239 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 P + L Q F + + ++ + A QF+ ++ Sbjct: 240 PSRTLTVLLPKTRSQLLAQHGGGGFEDANPISYWYERIQKTVNSPREHLEARVQFHSMLA 299 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 +P + + ++A +++ ++ + Y + Y + T+ K +G++ P Sbjct: 300 VPFANLVVLVLALPIAVR--KAGSTGLAFGYSLIVTIGYYLVFTLGKLLALNGVVPPELG 357 Query: 340 ALIPVILTISLSILI 354 A +L + L+ + Sbjct: 358 AWGANLLALGLAWVF 372 >gi|260434859|ref|ZP_05788829.1| unclassified ABC-type transport system permease [Synechococcus sp. WH 8109] gi|260412733|gb|EEX06029.1| unclassified ABC-type transport system permease [Synechococcus sp. WH 8109] Length = 387 Score = 91.7 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 104/328 (31%), Gaps = 16/328 (4%) Query: 33 LNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISR 92 + E+ QM + N I+ A + +P + +P TL+ ++ VF L+ +EL R Sbjct: 46 MFELVRQMVDK-NLPITIAAQVLFLSIPRWLAFSVPIGTLMASLFVFTRLSANNELTALR 104 Query: 93 AIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 ++GI+ ++++ + S+ + +F+ + + + E+ +++ K+ Sbjct: 105 SLGITTKRMISAAIALSMAMTLFSFFLNDVVVPRSERYAEVNLKRGLGQAIANKTGEDII 164 Query: 153 MQISNPQQDIF-----------IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAII 201 + I + K + +++ A Sbjct: 165 YPRFGRRTGIDGKSADRGLLQLFYSWKFQDGEMKDVTVLDFSRSGITQLLRADRAIWNDD 224 Query: 202 YNDKVKLKKVVEY---QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 L + D + E + + E ++ Sbjct: 225 QTGWDFLDGHILTLTANGSSTKADFKRYLYPLDSAPQRLAGIEEDAVNMTVAEALQAQRL 284 Query: 259 SNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 +S R + +P+ + L A++ + + + + Sbjct: 285 YEESGSIKEARKIRVRIQEKFTVPMACLVFGLFGATLGAQPTYRTSRSFSFVLTLGIIAI 344 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVI 345 Y I S G G L P+ AA +PV+ Sbjct: 345 YYVIGFSFSSLGVKGTLSPILAAWLPVV 372 >gi|301168145|emb|CBW27733.1| putative permease [Bacteriovorax marinus SJ] Length = 382 Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/381 (13%), Positives = 110/381 (28%), Gaps = 24/381 (6%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + RY ++ L + + L I + S L Sbjct: 1 MLKLTQRYLAVNFIAPFTMSLFFFVAFLLTFQLFRIIKIVISK-GVEWSLVFELMGHIAI 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I +P L I L+ SE+V R+ G++ +L PF++ ++ +G + Sbjct: 60 SFIPMAVPLSCLFATIYTLNKLSDDSEIVAMRSFGMTKSKLFLPFLISALFIGACIYSLN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI--------FIGAKKILPE 172 N + + + + I + G + + + Sbjct: 120 NKVIPASKTQFKNTIIRLTSRGVLTDIKEGQFFTEVAGVTLFADTVIDKGRKMYNVFIQQ 179 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPI 232 + K+ +I K+ + +I + ++ D Sbjct: 180 EGKGNLLEQVVTAKEGALIKIKNEEWSIPSVRLHLTDGTIVKRFKDTNKDLEKILFKEYD 239 Query: 233 KM----DGFQKFSEQFASRSFYEIIKKMSF----------SNKSNIFHNYRAETQFYFLI 278 F + R+ E+ ++ S K + + + + I Sbjct: 240 FPLASGGAVNNFVTKDGMRTNAELRSEIKKATALAVKKKLSRKDRERSMAKTKLELWSRI 299 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 PL+ LI S+ ++ R +F Y++ + SF + GI+ Sbjct: 300 NTPLLCFVFILIGFSLGIKHGRGKSKNSS-GRALFVLLGYYSLFFLGVSFARKGIVPAYV 358 Query: 339 AALIPVILTISLSILILLQKE 359 P I+ S+ + + Sbjct: 359 VVFAPTIILASIGAYFYKKLD 379 >gi|294012648|ref|YP_003546108.1| putative permease [Sphingobium japonicum UT26S] gi|292675978|dbj|BAI97496.1| putative permease [Sphingobium japonicum UT26S] Length = 407 Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 116/356 (32%), Gaps = 10/356 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L L+ + +L+ + + + + + +S + A +P + Sbjct: 6 DRYLARLIALPMLGTLVISAMLLVLDKMLSLFDFVAAEGG-PVSVVWRMLANMMPEYLSL 64 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP ++ ++ F L +SEL + RA+G+S +LL + +I L + ++ + Sbjct: 65 GIPIGLMLGILLAFRKLALSSELDVMRAVGLSYGRLLRVPYMFAIALALLNFGIVGFVQP 124 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE-------D 178 L + + + + + + Sbjct: 125 LSRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSLDEGRNLQGIFVRAVGKDG 184 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + + + D D I L + +S L I + Sbjct: 185 QTVAVTAAQGEFLATDDPDTIIFRLRDGVLVNDAPKYKSPRILSFSSHDLPIDLPQIERF 244 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + ++ E++ + + F+F +V M++ + L A + ++ Sbjct: 245 RGRDVDREKTIPELVT-IGHDPATPEKLRNEIRANFHFRMVEVAMMLLLPLAALAFAIPP 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS + V I + + + G G + P+ A P +L L + + Sbjct: 304 KRSTS-ALGVFLSIVFIVTYHKVNEYGQGVGSLGRIDPIIALWGPFLLFAGLILWM 358 >gi|85060086|ref|YP_455788.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] gi|84780606|dbj|BAE75383.1| putative transport protein [Sodalis glossinidius str. 'morsitans'] Length = 366 Score = 91.7 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 125/356 (35%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ L L +++ F L I + + + L VP + Sbjct: 2 IITRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + SE+ + A G+ L+ ++ S++ I V+ + + Sbjct: 61 QLILPLSLFMGLLMTLSRMYTESEITVMHACGLGKSILIRAALLLSLITAILAVVNVVWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ + K N + N +F+G K H++ Sbjct: 121 SPWSSRHQDLVMSEAKANPSMAALVEGQFKPAENGNSVLFVGNVKDKGFEHVFLAQLKPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 + + ++ ++ + L K Y+ R + T I Sbjct: 181 GNARPSVVIADRGHMSQRPDGSQLVMLDKGTRYEGTALLRDFRITDFTQYQAVIGRRAVA 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S ++ + A + ++ + + ++ M ++ +S+ Sbjct: 241 VDGTDAEQMSLRQLWRS----------PEPEARAELHWRFTLVVSVLIMAMMVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + T ++S G G L P+ + + ++L++++ Sbjct: 291 PRQGRV-LSMLPAMLLYLIFFLLQTSLRSNGAKGKLDPMLWMWLTNVAYLALALVL 345 >gi|307294585|ref|ZP_07574427.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] gi|306879059|gb|EFN10277.1| permease YjgP/YjgQ family protein [Sphingobium chlorophenolicum L-1] Length = 406 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 116/356 (32%), Gaps = 10/356 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L L+ + +L+ + + + + + +S + A +P + Sbjct: 6 DRYLARLIALPMLGTLVISAMLLVLDKMLSLFDFVAAEGG-PVSVVWRMLANMMPEYLSL 64 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP ++ ++ F L +SEL + RA+G+S +LL + +I L + ++ + Sbjct: 65 GIPIGLMLGILLAFRKLAMSSELDVMRAVGLSYGRLLRVPYMYAIALALLNFGIVGFVQP 124 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 L + + + + + + Sbjct: 125 LSRHAYEALRFELRSGALGASIKVGEFTNLGKRMTLRIERSLDEGRNLQGIFVRAMGKDG 184 Query: 186 K-------KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + + D D I L + +S L I + Sbjct: 185 QTVAVTAAQGEFLATDDPDTIIFRLRDGVLVNDAPKYKSPRILSFSSHDLPIDLPQIEKF 244 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + ++ E++ + + F+F +V M++ + L A + ++ Sbjct: 245 RGRDVDREKTIPELVM-IGHDPGTPDKLRNEIRANFHFRMVEVAMMLLLPLAALAFAIPP 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 RS + V I + + + G G + P+ A P +L L + + Sbjct: 304 KRSTS-ALGVFLSIVFIVTYHKVNEYGQGVGSLGKIDPIIALWGPFLLFAGLILWM 358 >gi|270157967|ref|ZP_06186624.1| putative permease [Legionella longbeachae D-4968] gi|289163766|ref|YP_003453904.1| Predicted membrane protein [Legionella longbeachae NSW150] gi|269989992|gb|EEZ96246.1| putative permease [Legionella longbeachae D-4968] gi|288856939|emb|CBJ10753.1| Predicted membrane protein [Legionella longbeachae NSW150] Length = 359 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 115/354 (32%), Gaps = 2/354 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K L T + +++ L + N+ + L +P ++ Sbjct: 2 IIFRYLAKEVLITLISLTSILVLIFLSNQLIQYLNRAAS-GSIPGVIIMKLMMLELPTLL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IP + ++ + L SE+ + RA G +LL ++ + ++G +V+ Sbjct: 61 CLLIPLGFYIAMLLAYGRLYAESEMTVLRACGYGPNKLLKHSLIMATVVGFIVAIVMIWG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L++ Q + I+ ++ ++ + T Sbjct: 121 SPLIYIERAKLLRSTGIQTLVQTIMPGRFHAINEGKEVFYVQSMSRDHTKAEQVFLAKRT 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 AD A D + + Q G+ + ++ Sbjct: 181 TVDDKTRWDVLWADQAFAETDPKTGEDYIILQNGKEYQGVPGHADYQIAEFGEYKARLPH 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + + + + +P+M+ A+TLIA +S RS + Sbjct: 241 PVVKISEDFRTISTANLFPFNNTDRAKAAELQWRFSVPIMVFALTLIAVPLSRINPRSGK 300 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + ++ I + SG + + I+ + ++ + Sbjct: 301 FAK-LLPAIIIYIVYANLLFIARDAMVSGKMPQWLGLWWVHLCIIAFGLWLIWR 353 >gi|50119363|ref|YP_048530.1| putative permease [Pectobacterium atrosepticum SCRI1043] gi|49609889|emb|CAG73324.1| putative permease [Pectobacterium atrosepticum SCRI1043] Length = 371 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 124/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ L L +++ F L I + + L VP ++ Sbjct: 2 IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVISLLGLGVPEMV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ LL ++ ++ + + + + Sbjct: 61 QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALILAMFTAVIATINVMWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + +F+G K H++ + Sbjct: 121 SPWSSMHQEEVLAEAKANPSMAALVEGQFQSAQGGNAVLFVGNVKGSEFQHVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + +Y + ++ + + Sbjct: 181 GNARPSVVVADRGHITQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQTVT 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + + A +F++ + + + ++ M L+ +S+ R + Sbjct: 241 LNNSDVQQMGMQA-----LWSSDAHDARAEFHWRLTLIVSVLIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G + P+ + ++ +++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWIWLTNLMYFGIAVML 345 >gi|295690097|ref|YP_003593790.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295432000|gb|ADG11172.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 400 Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 109/360 (30%), Gaps = 7/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + L ++ +++ + A LAA VP Sbjct: 6 MRLIDRYLLRLLFWPLVGCLGV-TVVALLLERILRLLDALSQSSARFGYVAQLAANLVPH 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P V +V L+ SE+ A G S+ ++ PF+ + L +F+++V Sbjct: 65 YLGLALPVAFFVALFIVIAKLSDGSEVDALLASGQSLERIAAPFLAVGLFLSVFSLIVFG 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS----NPQQDIFIGAKKILPENHIWE 177 + ++ + G + ++ G + Sbjct: 125 YMQPYSRYAYRAVMHAAINAGWNGRLAGGAFIDDKGSLLTADSADIAGQSLTRVFIRRLD 184 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK-VVEYQYGRIPIDKNSTTLNIPIKMDG 236 I + D + D ++ V + + NS T P+ Sbjct: 185 AKGREEIITAGSANLKMDPGGKTVTMDLRDGRRIVRDDNGQYRNLAFNSLTTQTPLAAAA 244 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 R + + ++ Y + L + L+A + L Sbjct: 245 VLLRDRGGDERELTLGELATQAKSPHPVVSKSTLLSELYGRLARAAFLPFLPLLAFPLGL 304 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R N+ ++ G+ + + +S K+ + A IP L S ++ + L Sbjct: 305 ASKRGNRAAGLIMAGVLL-LAFQHALLLGQSLAKADKVAAAPAIWIPFALFSSFAVWLFL 363 >gi|319896844|ref|YP_004135039.1| inner membrane protein [Haemophilus influenzae F3031] gi|317432348|emb|CBY80703.1| conserved inner membrane protein [Haemophilus influenzae F3031] Length = 364 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 126/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALLMSLLTASIATYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++++ K N ++ SN +FI K ++++ + Sbjct: 121 SPWAIQKQANIVEDAKANPTMGVLSSGQFISTSNNNVVLFIDQIKDNQIHNVYLFQITPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K ++ + +L + N LK + + D T + G Q+ Sbjct: 181 KQIKPSVVTAEKGELIALPNGDQVLNLKNTQRVEGTSVLPDFRITHFDEYQAYLGHQETE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +++ + + + + + ++ I + L + M LIA +S R Sbjct: 241 NNADEAAELTLVQLIQQDSPAA-------KAELHWRITLILAVPLMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + KS G +G L + I + L I++ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSFKSAGGAGKLDTAIFMQLVNIGFLLLGIVL 345 >gi|317153284|ref|YP_004121332.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] gi|316943535|gb|ADU62586.1| permease YjgP/YjgQ family protein [Desulfovibrio aespoeensis Aspo-2] Length = 380 Score = 90.9 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 119/354 (33%), Gaps = 6/354 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 G+L RY + L L + + D+ + + + ++PLI Sbjct: 8 GVLGRYLIQQNLYLMSICLTVGTCIYLLSDVFDRLDDFIK-AGLGAETILFYFFVKIPLI 66 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q++P I L+ ++ L R+ E++ RA G+S + F++ ++ + + Sbjct: 67 VSQLMPAIFLLALVLQLGILTRSKEMLALRAGGVSFAWFIKFFLIYAMFWSLGQLAFSQF 126 Query: 123 IATSGEKIGIDLIQQW-KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + GE + ++ + + + W + + + + Sbjct: 127 LGVFGEYEANRIWKEDVRKKQLDELTITDLWFRDGPFIVLAREAYPGKSRASDVVVYEFA 186 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +I+ K A + + + ++ + + ++ +K + Sbjct: 187 TDNQELIRILTAKKAMIDDNGWGLLDVHELDTRTFVSVTRLSQFLSVRQNLKAYAAVELK 246 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A E+ + + +S + T ++ + M + S Sbjct: 247 GDTAQLPLLELSRAIEKLEESGS-NVEILRTIWHTKWSYAFSIAVMA---LLALALVTFS 302 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + F+ Y + + + G+ +L P AA + + +L+ + L Sbjct: 303 ENIYANIGFSLILIFVQYGVHAVGATAGEQAVLPPFVAAWLGNFVMAALAGMRL 356 >gi|218296305|ref|ZP_03497061.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218243377|gb|EED09907.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 347 Score = 90.9 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 110/343 (32%), Gaps = 12/343 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + L L L ++L + E+ + + R P Sbjct: 1 MKTLDRYLLREALSLFLGGLAAIVLLFLAGAVYEVLAPLVAK-GADPYTLLLYLLYRAPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P L +++ + SEL A+G++ ++L PF++ ++L+ + L+ Sbjct: 60 ALVRGAPVAYLFTLLLLLSRMAEDSELKALLALGVARERVLLPFLLLALLIALAVFLLGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G DL+++ + Q + + + Sbjct: 120 SLVPKALAAGQDLLRRQVLERPRALLTPGTTFQDARGRVVY------VGEVAGDRIGKLR 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ + R ++ ++ + + + + L + + +Q + Sbjct: 174 VLSQEEVLLAERGRFQEGVLLVEEGQRVTYEGDRPRTLTRFQKGEILLKDLTFEPWQNPA 233 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + ++++ ++ P V L A ++ Sbjct: 234 NRMTLGELKKEVERLRALGVKAGLEAT----TYHRRYAEPASAVVFALFAVGLAFYLLGG 289 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 ++ V I + F Y ++ + G+ L P+ AA P Sbjct: 290 SRSLGWVGVAILTFF-YYATWSVGRIMGEQNALDPLLAAWGPN 331 >gi|167626385|ref|YP_001676885.1| hypothetical protein Fphi_0163 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668816|ref|ZP_04756394.1| hypothetical protein FphipA2_08610 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877348|ref|ZP_05250058.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596386|gb|ABZ86384.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843369|gb|EET21783.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 352 Score = 90.9 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 122/356 (34%), Gaps = 10/356 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY FK + L L IL F+ + S ++ ++P I+ Sbjct: 6 IDRYIFKTVFSSFLIVSLIFCILFFIFTYLAQVSN--NDTGASNIELIIITIYQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ V+ I+ I T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVVLVGIIGSIVTMVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 +K+ + + K+ + + + I +D + Sbjct: 124 PVLQKLADSNTVAYNTHDLWLKTPDGFMNISNIDPNEGKAYGIRKF----ITKDNQVQEV 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K + DA + V + N Sbjct: 180 RYAEKAEYVNDATANVFNVSVVTFPNKDVKHIDVKENVYKAIWSNPIPISVAKVITINDN 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 +F ++ + M SN +F+ I PL L+ + L++ +S+ +RS+ Sbjct: 240 DYLNFTQLTRYM----LSNSQAKDSISLKFWQEIFQPLALMVLILLSVPLSIGSTRSSTL 295 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + G F GF + I I L + A P ++ + L I + ++ ++ Sbjct: 296 ILKLLLGAFFGFAFFIINQIFGPIALILHLPTILGAAGPTVIALILLIYLFIKSKE 351 >gi|301168568|emb|CBW28158.1| putative transport-related membrane protein [Bacteriovorax marinus SJ] Length = 368 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 51/366 (13%), Positives = 120/366 (32%), Gaps = 14/366 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 GIL + K + K ++ +LV V +L + N + + + +P Sbjct: 1 MGILRKLILKEWFKFFAGSVIALFLLVSVANLISGFLR----GNVTATEVMINHFIEIPG 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +I P L+ ++ L SEL A G S + + S+++ I ++ + Sbjct: 57 YLNKIFPVSCLMASLFSINKLKTRSELTAIFAAGYSRKNYIIDLIFASLIVTIVQFMMTS 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSD----------IIPWMQISNPQQDIFIGAKKILP 171 I+ + +LI + KS + + K Sbjct: 117 YISPFFKSQRENLISESTHKFSNLKSQGLRSSTIGSGKMWYRSDDYFIAFTNYNQIKKEL 176 Query: 172 ENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP 231 N ++ + ++ + + + + I V + + + +N+ Sbjct: 177 YNVTLYKLSADSYLEEIQAMQKVYWEKGIWIGKNVIKLDGLNLKSFPKAEENKENIINLY 236 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 + ++ + ++ K + S I N + + ++ L + Sbjct: 237 ETPEELRQIEADITILNIVKLWKYIDQLKTSGININEYMVLFYDKFANSIICIIFAILAS 296 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 SV RS+ +A F + + + + + G + + P+AA I + Sbjct: 297 VSVFNPNRRSSSFGKNIAAVFFFTILYWLVYSYLIELGNNSKVPPIAATFTVPIAFTIIL 356 Query: 352 ILILLQ 357 I+I + Sbjct: 357 IVIFSR 362 >gi|108760212|ref|YP_631129.1| hypothetical protein MXAN_2918 [Myxococcus xanthus DK 1622] gi|108464092|gb|ABF89277.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 371 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 122/365 (33%), Gaps = 13/365 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSI-SRGAVLAATRV 59 M G L+ Y + YL+ + L LV V + + ++ A L + Sbjct: 1 MRGTLFIYVLRTYLR---FALGILAGLVLVFVVVDFVDRAKLYTGPGWVWDAAELYFYKA 57 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 + +QQ+ P L+ L + E+ RA+ L P +V S + + V Sbjct: 58 MMSVQQLGPAALLLAAGTTVSALRKQGEVTAIRALTFGPSALYLPILVASFVACVGLVAF 117 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 +AT + ++ Q + + P F+ ++D Sbjct: 118 DERVATYSGRRVDEITTQRFNKWGDWRFYYTPKQWFRRGDNIFFLRGGSAQEG---FQDV 174 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVK-LKKVVEYQYG----RIPIDKNSTTLNIPIKM 234 + T+ + + R DA L VVE + ++ + + Sbjct: 175 SVFTVTESFDLQRRLDASGMFPVEGMRWRLTDVVERTFDGEGKTSVRQLPEAEYDLGVAV 234 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 F+ + E+ +++ + E + P+ L+ + Sbjct: 235 TAFRIRPGRPEQMRASELREQIVARRDVG-LATKQFELALHNRFAYPMAAFPAALLGVGL 293 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +L +R + G+ + ++ ++ + ++ + L P AA P +L ++ + Sbjct: 294 ALRANRRGHLTAAIIEGLLTAVAMWGLMMVCRTLVLTERLSPGVAAWTPTVLLGLIAGAV 353 Query: 355 LLQKE 359 LQ+E Sbjct: 354 WLQRE 358 >gi|187250532|ref|YP_001875014.1| permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] gi|186970692|gb|ACC97677.1| Permease YjgP/YjgQ family protein [Elusimicrobium minutum Pei191] Length = 364 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 118/355 (33%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K L L L + + F++ ++ N + L VP + Sbjct: 5 IISKYMIKNLLTFFLGALFVLVFIFFMMHFIKLFNLAMTFGADMLWVFKTLVKL-VPDVF 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P + ++ N++ E++ RA G S ++ P + ++ L + N I Sbjct: 64 SLCAPMAFQLAVLLTLGNMSENGEIIALRAAGFSFKEITKPLFIFALFLFLVIFSFTNWI 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +D + K + +M+I + + K + + + + Sbjct: 124 TPKNTKSFLDARNNVRGRIGKVILEPKTFMEIGDWSLYMESLDPKTNLMSQVRLLNKNDS 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQK 239 + KI +KL + K N + ++ + ++ Sbjct: 184 ANYTTKINALSGIVNVTSDYVGLKLFDGQMQRVSSEDPSKIMAANFKSYHVTFPLVRAKE 243 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + ++I ++ +S + +T V+ L + + L++ + F Sbjct: 244 RRLREEEFTTPQLIARI-YSGELTDKERAEHKTNVAMRQVLALSPLVLVLLSCPLVFSFG 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + I Y ++ S GK + A +P+ + +S + Sbjct: 303 KRANKAWGMLWSIVIVLSFYMLLMAGVSLGKKYEIAAYFAPFLPIAAGLIVSRYL 357 >gi|226355960|ref|YP_002785700.1| permease YjgP/YjgQ [Deinococcus deserti VCD115] gi|226317950|gb|ACO45946.1| putative permease YjgP/YjgQ; putative membrane protein [Deinococcus deserti VCD115] Length = 381 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 39/382 (10%), Positives = 105/382 (27%), Gaps = 34/382 (8%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L ++ L + + A +VP + Sbjct: 4 LTRYVTAELIPPLLAGTLLFTAVLSFGYFF---ISSQWLAGVPLGLVSRWIAYQVPDTLV 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++ P +++ +V F ++ ELV ++ GI + ++ P + + L+ + + IA Sbjct: 61 KVFPMAIVLMTVVAFGRMSTERELVAVQSGGIGLGRVARPVALVAGLVTALALWLSLWIA 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L + + + + + Sbjct: 121 PKANVETRGLYWDALTGAGLSQLVGKTVDLGGGLTLALASYDSATRELRGVRVEKWNADA 180 Query: 185 DKKNKIIHRKDADLAIIY-------------------------NDKVKLKKVVEYQYGRI 219 ++ +I + + V + Sbjct: 181 PRRATLIFADKGTFENNQLALSGYQVYTVDYEAASELNRVPENDPLAFREAVQNVFPSVV 240 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE--IIKKMSFSNKSNIFHNYRA--ETQFY 275 +K + TL + + Q ++ + + ++ + + R Sbjct: 241 IPEKTTDTLKVDTGLSRKQTLAQYADAIGADSEGWPELITALTAPGVKASERQAARVNLN 300 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + +P + + L A +L F R + + + Y + + + + + Sbjct: 301 RKLALPFANLVLALSALPFALRFGR--TLGVSLGIALLIAVAYYLLFFVGLTVASAMPAV 358 Query: 336 PVAAALIPVILTISLSILILLQ 357 P + I+ + +L + Sbjct: 359 PEVGVWLANIVFAVAGLWMLRR 380 >gi|16273591|ref|NP_439846.1| hypothetical protein HI1704 [Haemophilus influenzae Rd KW20] gi|1176472|sp|P45333|LPTF_HAEIN RecName: Full=Lipopolysaccharide export system permease protein lptF gi|1574558|gb|AAC23350.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] Length = 372 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 124/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K +I + +L + N LK + D T + G+Q Sbjct: 181 KQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + + S + + ++ I + L + M LIA +S R Sbjct: 241 NTNDEVAELTLSQLIDLDSSSA-------KAELHWRITLILAVPLMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + KS G +G L + I L++++ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|325983220|ref|YP_004295622.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] gi|325532739|gb|ADZ27460.1| permease YjgP/YjgQ family protein [Nitrosomonas sp. AL212] Length = 358 Score = 90.5 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 103/341 (30%), Gaps = 7/341 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + +L + L + I+ L + + Sbjct: 1 MKLIERYIAREIMLPFTVVILILIGLFASFSSARLLAGAVTET-LGIAGLIKLVFLKTLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +IP + I+ LN+ EL + R++GIS +++ + +I +GI + ++ + Sbjct: 60 ALEVLIPIALYISVIMGLGRLNKDQELNVIRSVGISGHRIVIAVLSVAIPVGIISGMLSS 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + L Q + + + + + I + + ++ Sbjct: 120 YVRPWAYGESYILDAQAEAELNTNRFQAGRFYGSEKSGRVI--YVRNKNEADKQMQNIFH 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + I I + + T++ + F+K Sbjct: 178 YIKKPDSSEIVIAKQAQQIKP----TAEDDRPHIQLSEGTIYQLTSIASTDDVIQFKKMI 233 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +K + + R + + I PL V + LIA + R Sbjct: 234 YFIDNDFVTNYRRKAAATRTLWESDVPRDIAELQWRISRPLATVLLALIALTFIHTAPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 ++ Y + + K++ + + V Sbjct: 294 DKTEKTYLIAALVFAAYYNLSGLAKTWVEQETIGSVPGVWW 334 >gi|162148704|ref|YP_001603165.1| permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787281|emb|CAP56875.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 90.5 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 115/364 (31%), Gaps = 11/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 PG L RY L L L M + + L + N + ++ A L A VP Sbjct: 16 PGTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGG-TLKIFAGLLADLVPH 74 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P V V +++ +E+ A G+S+ ++ PFVV +LG+ + Sbjct: 75 YLGLALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYG 134 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW-------MQISNPQQDIFIGAKKILPENH 174 I + G + M ++ Q +++ + Sbjct: 135 FIQPYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDK 194 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 IT D ++ + + V + + + D + K Sbjct: 195 SAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDDRPTLTTFDTTTRFFQTSSKA 254 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 F+ + E+ + + + + AE +F + + + + ++A ++ Sbjct: 255 HAFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAEL--HFRLARAMAIPFIPILACAL 312 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + R + I + + S S + P P + + + Sbjct: 313 AGMAKRQRHNTGLAIAAISL-VGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWL 371 Query: 355 LLQK 358 +L++ Sbjct: 372 ILRR 375 >gi|162146456|ref|YP_001600915.1| hypothetical protein GDI_0632 [Gluconacetobacter diazotrophicus PAl 5] gi|209543541|ref|YP_002275770.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785031|emb|CAP54575.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531218|gb|ACI51155.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 363 Score = 90.5 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 116/355 (32%), Gaps = 11/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ Y + K L M L + ++ S + L ++ + + Sbjct: 2 IIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVN-GLLSTNTILALVTLKLLIGL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + ++P + ++ L SE+ A+ ++ +L + + + I L+ + Sbjct: 61 EVLVPVSLYLSIVLALGALYGNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +L + + + D + + N + IF+ ++ Sbjct: 121 RPWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIFLTEREGPGTPARDIFVQVRR 180 Query: 184 IDKKNKIIH---RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 I D + V+LK Y GR P + I D + Sbjct: 181 AKTTQIIHAELGYPMTDEGKQSDVYVRLKNAHVYDIGRQPGVSDKVLTVREITQDPNRHS 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +E S +++ S H +F + + P+ + + ++A ++ R Sbjct: 241 TEPLGYSSIAAPSLQLAAS------HAPADVAEFQWRLSTPITTMLLAMLAVPLARGRPR 294 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 N+ + I F+ Y + T +++ + G++ + L L+ +L Sbjct: 295 QNRYGK-LGAAILIFFVYYLLYTSARTWVQHGMVAAMPGIWWAPALLAVLTGFML 348 >gi|293406596|ref|ZP_06650522.1| predicted protein [Escherichia coli FVEC1412] gi|298382335|ref|ZP_06991932.1| predicted protein [Escherichia coli FVEC1302] gi|291426602|gb|EFE99634.1| predicted protein [Escherichia coli FVEC1412] gi|298277475|gb|EFI18991.1| predicted protein [Escherichia coli FVEC1302] Length = 342 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 99/316 (31%), Gaps = 2/316 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 28 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 86 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 87 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 146 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 147 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 206 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 207 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 266 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + P++ +AM L+A + RS Sbjct: 267 MPGNTFSVRQLNHYIHYLQETGQPS-SEYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325 Query: 302 NQPRIIVAYGIFSGFM 317 +A G+ G + Sbjct: 326 PGMGSRLAVGVIVGLL 341 >gi|86138693|ref|ZP_01057266.1| membrane protein, putative [Roseobacter sp. MED193] gi|85824753|gb|EAQ44955.1| membrane protein, putative [Roseobacter sp. MED193] Length = 387 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 112/356 (31%), Gaps = 7/356 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY YL +F L + + +V + +++ + A +P +I+ Sbjct: 4 FDRYVLSQYLLFFSFFALILVAVFWVNRAVVLFDRLIG-DGQTAIVFLEFTALALPNLIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + V L SEL + RA G S WQ+ P + ++ + ++ + + Sbjct: 63 MVLPVAVFASAVWVTNRLQSESELTVLRATGTSPWQMARPALAFGVITALMMSVLTHFLL 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ----ISNPQQDIFIGAKKILPENHIWEDFT 180 S Q+ N + ++ ++ + I D Sbjct: 123 PSSISQLALREQEVSRNVTAKLLTEGHFLHPVKGVTFYIRQIDSNGTLNDVFLSDRRDPN 182 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D + + +++ + + + +I + Sbjct: 183 QTMTYTGARAFLVRDGENTHLIMVNGMAQRLEHRTQQLSTTNFSDFSYDISSLANQSTAA 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFS 299 S +E+++ + + + +F+ L+ VA+ LI S + L Sbjct: 243 IRNIREISSWELLQDRENISLTEGYSRGALAEEFHLRFARALICVAVALIGFSTLMLGSY 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ + ++ +S +P + +++++ L Sbjct: 303 SRLGVWRQALVAFLLLILVEGLRGVVSEPVRSNP-DLWLLIYLPAFIGLAIAVGFL 357 >gi|258542689|ref|YP_003188122.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633767|dbj|BAH99742.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636826|dbj|BAI02795.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639879|dbj|BAI05841.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642935|dbj|BAI08890.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645990|dbj|BAI11938.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256649043|dbj|BAI14984.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256652030|dbj|BAI17964.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655087|dbj|BAI21014.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 399 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 122/364 (33%), Gaps = 12/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 PG L RY + L L MI + + L + N + N I L A +P Sbjct: 20 PGTLDRYLIAQVMPPFLVALSVVMIALILERLLVLFN-LLAAGNNHIGIFIGLLAALLPH 78 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP V V +++ E+ + G+S+ ++ P++ ++LG+ + L+ Sbjct: 79 YLGLAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGVLSFLLYG 138 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI-FIGAKKILPENHIWEDFT 180 I G + + S+ + ++ +++ Sbjct: 139 FIQPHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDL 198 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPIKM 234 S ++ + + ++ L V + D ++ L + Sbjct: 199 SEQQERDITARNGHIRIGSDGETVEIDLTNGVIVTDKGDGVPSLVTFDHSTRYLTHASHI 258 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 F+ E + E++ ++ + S + R+E +F + L + M L+AAS+ Sbjct: 259 SPFRTRGEDERELTSPELVGRLIRHDPSISRPHMRSEV--HFRMARSLTVPFMPLLAASL 316 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +L R + II S + + P ++ I L+ Sbjct: 317 ALMRKRQRNNA-GLPLAFIIMVGFDHIIQFGHSMVATKKASLLL-IWGPAVVFIVGCTLL 374 Query: 355 LLQK 358 LL K Sbjct: 375 LLYK 378 >gi|304396396|ref|ZP_07378277.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] gi|304355905|gb|EFM20271.1| permease YjgP/YjgQ family protein [Pantoea sp. aB] Length = 366 Score = 90.1 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEVPTNLVLTLLGLGVPQMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ + + + + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMILMLFTSVVAAVNVIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ Q K N + + +F+ K +++ Sbjct: 121 GPWSSRYQDEVTQNAKANPGAAAMAAGQFQTSGDGSAVLFVENVKGNNFGNVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + ++ + ++ + Sbjct: 181 GNARPSVVLADSGHLEQRKDGSQVVTLDKGTRFEGTALLRDFRITDFTNYQAIVG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + + + + + ++ + + ++ M L+ +S+ R + Sbjct: 236 YKAATLDPNDSEQASLSDLVANKTPDFQAELHWRLTLVFAVLVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + +KS G G L P + I + L++L+ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLKSSGAKGRLDPALWMWVVNISYLVLAVLL 345 >gi|107103348|ref|ZP_01367266.1| hypothetical protein PaerPA_01004417 [Pseudomonas aeruginosa PACS2] Length = 362 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 40/347 (11%), Positives = 108/347 (31%), Gaps = 6/347 (1%) Query: 13 YLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITL 72 L T ++++ + Q + ++ A R+P +Q I+P Sbjct: 1 MLVTMSAVSAVLLVIIMSGRFIKYLAQAAQ-GLLDPGSLFLIMAFRIPGFLQLILPLGLF 59 Query: 73 VVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGI 132 + ++ + L SE+ + A G+S +LL + ++L+ I + +A G Sbjct: 60 LGILLAYGRLYLESEMTVLSATGMSQKRLLGYTMAPALLVAILVAWLSLFLAPQGINQFA 119 Query: 133 DLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIH 192 L+ + + + + +++ + D + Sbjct: 120 LLLNKQDTLTEFDTLVPGRF--QAMRDGTRVTYTEELSKDRGELAGIFISQKDLNSSNQE 177 Query: 193 RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 R + L + Y + + + + Sbjct: 178 RGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPKPEASSE 237 Query: 253 IKKMSFSNKSNIF--HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 + + +++F N R + + + + PL++ +TL+A +S R + + + Sbjct: 238 VSERDAVPTADLFGSDNPRYQAELQWRLSTPLLVFVVTLLAVPLSRVNPRQGR-FLKLLP 296 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I ++ ++ G + L +++ +L+ Sbjct: 297 AILLYMGYLALLIAVRGQLDKGKIPMAIGLWWVHGLFLAIGLLLFYW 343 >gi|87306338|ref|ZP_01088485.1| hypothetical protein DSM3645_08402 [Blastopirellula marina DSM 3645] gi|87290517|gb|EAQ82404.1| hypothetical protein DSM3645_08402 [Blastopirellula marina DSM 3645] Length = 379 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 46/372 (12%), Positives = 109/372 (29%), Gaps = 22/372 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYS----ISRGAVLAATRV 59 I+ RY ++K+ L F + L VID ++ + R+ Sbjct: 3 IIDRYLLTQFIKSFLIFFISFTGLYVVIDSFNNLDEFLRYGEQTGRGAFPILFDYYTPRI 62 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 +TL+ + L R +E+ A GI+ +++ P ++ L+ I L Sbjct: 63 FTFFNMTGGILTLIAAMFTVTWLQRHNEMTALMAAGITKERIVRPVIIAVGLIAILGALN 122 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + Q W KQ + + + + Sbjct: 123 REFVVPEYSDALSRNAQDWLGESAKQLQPKYDNLTDVLISGNHTFANELRIEAPKFRLPR 182 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG--- 236 + + K ++ L +V E + ++ + M Sbjct: 183 SQPGVGTKINAVNAFFKPAEADRPSGYLLDEVTEPENLAEIPSLTDRDGSVFVLMPQDNA 242 Query: 237 --------------FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPL 282 F++ + RS +S ++ + + + P Sbjct: 243 WLAPNQCFVVSELTFEQLTASREWRSSASTWALISALRNRSLDFGADVRVEIHSRLTQPF 302 Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + + L+ + L+ + V + + + + G + ++ P AA Sbjct: 303 LDMTLLLLGLPLVLKNDNR-NVFVAVGLCGAVVVLFFGVTMASRGLGANYMVSPAFAAWF 361 Query: 343 PVILTISLSILI 354 P++L + + + Sbjct: 362 PLMLFVPFATYM 373 >gi|209545529|ref|YP_002277758.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533206|gb|ACI53143.1| permease YjgP/YjgQ family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 402 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 115/364 (31%), Gaps = 11/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 PG L RY L L L M + + L + N + ++ A L A VP Sbjct: 16 PGTLDRYLIGQMLPPFLLSLGVVMTALLLERLLTLLNVLASDGG-TLKIFAGLLADLVPH 74 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P V V +++ +E+ A G+S+ ++ PFVV +LG+ + Sbjct: 75 YLGLALPAAICVSVFSVVRRMSQNNEIDALMASGVSLLRIARPFVVMGAVLGLVGFSLYG 134 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW-------MQISNPQQDIFIGAKKILPENH 174 I + G + M ++ Q +++ + Sbjct: 135 FIQPYARYDFRQALYIASHAGWTPHLQARMFAAPSDTLMLTADQVQGAGTRLRRVFIRDK 194 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 IT D ++ + + V + + + D + K Sbjct: 195 SAGLERDITADSGRLLMTDDGTTVRLDLAHGVIVTDRNDGRPTLTTFDTTTRFFQTSSKA 254 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 F+ + E+ + + + + AE +F + + + + ++A ++ Sbjct: 255 HAFRNRGNDERELTVLELRHGIRHRDLAIRRTHLVAEL--HFRLARAMAIPFIPILACAL 312 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + R + I + + S S + P P + + + Sbjct: 313 AGMAKRQRHNTGLAIAAISL-VGFDHALQLGLSLVASRSMSPWLVIWGPFAVFGFACVWL 371 Query: 355 LLQK 358 +L++ Sbjct: 372 ILRR 375 >gi|114797170|ref|YP_760296.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114737344|gb|ABI75469.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 391 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 52/366 (14%), Positives = 118/366 (32%), Gaps = 7/366 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + +L L + + +++ ++ + + ++L A +P Sbjct: 1 MFARLDRYLIRSFLGMFAG-LTVLAMALLLLERLIRITEIVSGSGSAFASASLLVANLIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ I+ L+R+ E+V A G+S+++++ PFV S++L ++L+ Sbjct: 60 HYLNLALPGAFLISMILTIDRLSRSGEIVALMAAGVSLYRIVLPFVQFSLVLAAASLLIS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +++ + ++Q N + Sbjct: 120 GFLQPLSRYSYREIVYNLQHQSVLSVFQEQKFVQYDNRIIWTDSVLPGGRLGQTFILESE 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKV----VEYQYGRIPIDKNSTTLNIPIKMDG 236 K ++ + L + L+ P+ + Sbjct: 180 PDGARTLLTGGSGKLREIRAGEWEITLLGGAGASYRDADPPEEYDRIEYGELSWPVIAET 239 Query: 237 FQKFSEQFASRSFYEIIKKMSF-SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q + R + + A F+ +L+AM LIA + Sbjct: 240 GQYRARGGDERELFLPELLAKAGAAMPGDIAPAVAAATFHDRTSRAALLLAMPLIAIILG 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L R + V GI + ++ G++ P V++ + SI + Sbjct: 300 LNLGRVARSS-GVVLGILFLLGVQKVLEYTLVQTSEGVIPPWMGFWPIVVVVAAASIFLF 358 Query: 356 LQKEDG 361 + +G Sbjct: 359 RRLAEG 364 >gi|68250307|ref|YP_249419.1| permease [Haemophilus influenzae 86-028NP] gi|145633639|ref|ZP_01789366.1| molybdate ABC transporter permease protein [Haemophilus influenzae 3655] gi|145639139|ref|ZP_01794746.1| predicted permease [Haemophilus influenzae PittII] gi|148825753|ref|YP_001290506.1| permease [Haemophilus influenzae PittEE] gi|229847325|ref|ZP_04467427.1| predicted permease [Haemophilus influenzae 7P49H1] gi|260581045|ref|ZP_05848867.1| permease [Haemophilus influenzae RdAW] gi|68058506|gb|AAX88759.1| predicted permease [Haemophilus influenzae 86-028NP] gi|144985516|gb|EDJ92332.1| molybdate ABC transporter permease protein [Haemophilus influenzae 3655] gi|145271701|gb|EDK11611.1| predicted permease [Haemophilus influenzae PittII] gi|148715913|gb|ABQ98123.1| predicted permease [Haemophilus influenzae PittEE] gi|229809750|gb|EEP45474.1| predicted permease [Haemophilus influenzae 7P49H1] gi|260092285|gb|EEW76226.1| permease [Haemophilus influenzae RdAW] gi|301170459|emb|CBW30066.1| conserved inner membrane protein [Haemophilus influenzae 10810] gi|309750720|gb|ADO80704.1| Lipopolysaccharide export permease, LptF [Haemophilus influenzae R2866] Length = 367 Score = 90.1 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 124/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K +I + +L + N LK + D T + G+Q Sbjct: 181 KQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + + S + + ++ I + L + M LIA +S R Sbjct: 241 NTNDEVAELTLSQLIDLDSSSA-------KAELHWRITLILAVPLMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + KS G +G L + I L++++ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|260582802|ref|ZP_05850588.1| permease [Haemophilus influenzae NT127] gi|260094128|gb|EEW78030.1| permease [Haemophilus influenzae NT127] gi|309972900|gb|ADO96101.1| Lipopolysaccharide export permease, LptF [Haemophilus influenzae R2846] Length = 367 Score = 89.8 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 124/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K +I + +L + N LK + D T + G+Q Sbjct: 181 KQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + + S + + ++ I + L + M LIA +S R Sbjct: 241 NTNDEVAELTLSQLIDLDSSSA-------KAELHWRITLILAVPLMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + KS G +G L + I L++++ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|145635439|ref|ZP_01791140.1| predicted permease [Haemophilus influenzae PittAA] gi|145267313|gb|EDK07316.1| predicted permease [Haemophilus influenzae PittAA] Length = 367 Score = 89.8 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 126/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K +I + +L + N LK + + D T + G+Q Sbjct: 181 KQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYQAYLGYQSAE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + ++ S + + ++ I + L + M LIA +S R Sbjct: 241 NTNDEVAELTLSQLIDLNSSSA-------KAELHWRITLILAVPLMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + KS G +G L + I L++++ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|145637645|ref|ZP_01793300.1| molybdate ABC transporter permease protein [Haemophilus influenzae PittHH] gi|145269168|gb|EDK09116.1| molybdate ABC transporter permease protein [Haemophilus influenzae PittHH] Length = 367 Score = 89.8 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 126/356 (35%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNIVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKL-----KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 K ++ + +L + N L K+V + + + Sbjct: 181 KQTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAE 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 +++ A + ++I + A+ + ++ I + L + M LIA +S Sbjct: 241 NTNDEAAELTLSQLID----------LDSSSAKAELHWRITLILAVPLMALIAVPLSRVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + KS G +G L + I L++++ Sbjct: 291 PRQGRFAK-ILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|163739704|ref|ZP_02147112.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] gi|161386934|gb|EDQ11295.1| permease YjgP/YjgQ [Phaeobacter gallaeciensis BS107] Length = 376 Score = 89.8 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 117/355 (32%), Gaps = 13/355 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 YL +F L + + ++ + +++ S A +P +++ ++P Sbjct: 1 MLSQYLLFFGFFALILVAVFWINRAVVLFDRLIG-DGQSALVFLEFTALALPNLVRMVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 ++ V LN SEL + RA G S WQ+ P +V ++ + ++ + + + Sbjct: 60 VAAFAASVWVTNRLNSESELTVLRATGTSPWQMAKPAMVFGLITAVMMSILTHVLLPASI 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGA------KKILPENHIWEDFTSI 182 + N + ++ + + + + Sbjct: 120 ATLEQRESEVARNVTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVT 179 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 K ++ + ++ + + + + + +I + ++ + Sbjct: 180 YTGGKAYLVRDGERTHLVMVDGMSQRINTETQRL--SSTIFSDFSYDISSLANKAEEKTR 237 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EFSR 300 + E++ + + + + L+ VA+ LI + + FSR Sbjct: 238 NIRAIPSLELLGDRAKLVADGPYSAGALAEELHLRFARALVCVAVVLIGFAALMLGGFSR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + F+ + + ++ L P+ IP ++ + + ++ L Sbjct: 298 FGVWRQALLAFVLLIFVEGLRGVVSEPVLQNAELWPLI--YIPTLIGLLVGLVFL 350 >gi|229845239|ref|ZP_04465372.1| hypothetical protein CGSHi6P18H1_02459 [Haemophilus influenzae 6P18H1] gi|229811834|gb|EEP47530.1| hypothetical protein CGSHi6P18H1_02459 [Haemophilus influenzae 6P18H1] Length = 367 Score = 89.8 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 125/356 (35%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNIVKDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKL-----KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 K ++ + +L + N L K+V + + + Sbjct: 181 KQTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAE 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 +++ A + ++I + + + ++ I + L + M LIA +S Sbjct: 241 NTNDEAAELTLSQLID----------LDSSSVKAELHWRITLILAVPLMALIAVPLSRVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + KS G +G L + I L++++ Sbjct: 291 PRQGRFAK-ILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|328952245|ref|YP_004369579.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] gi|328452569|gb|AEB08398.1| permease YjgP/YjgQ family protein [Desulfobacca acetoxidans DSM 11109] Length = 401 Score = 89.8 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 109/360 (30%), Gaps = 6/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I++R+ ++ LL ++VF+ + + + S+ +P Sbjct: 14 PLIIYRHLWRECWDIFAVGLLAITVIVFMGRITRVMQMIITK-GVSLIDIGKFCVLLLPY 72 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P ++ ++ F L+ +E++ + G+S+ QLL P + ++++ + Sbjct: 73 LLLFTVPMAAMIAVLITFLRLSNDNEIMALKTSGVSVLQLLPPILAFALVISSTALFFSL 132 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDF 179 G + L+ + + D Sbjct: 133 YATPWGNQEMRRLLSEVTKRRADLGIREQVFNNDFEHVVLFVNRVPTSGGPMEGVFLSDD 192 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + ++L + + +S K Sbjct: 193 RDPQVPITIAADKALLLFDLKSERLIMQLFQGRVLRLSEDATSFHSIEFETYQVPLELFK 252 Query: 240 FSEQFASRSFYEIIKKMSFSNKS--NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 F + S + + + + + +P+ M LIA + + Sbjct: 253 FVPKPKSEDEMFLGELRQALAQHKPGTLDYNKLLVELNRRFSLPVGACIMILIAMPLGIS 312 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + G+ + Y ++T G+ I+ P A +P + + L+ + + Sbjct: 313 TQIKGR-AVGLIMGLVIFLLYYLLLTAAWRLGQHAIIPPGLAPWLPDFIFLFLAWGLWRR 371 >gi|121997477|ref|YP_001002264.1| permease [Halorhodospira halophila SL1] gi|121588882|gb|ABM61462.1| permease YjgP/YjgQ family protein [Halorhodospira halophila SL1] Length = 372 Score = 89.8 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 33/355 (9%), Positives = 107/355 (30%), Gaps = 10/355 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + L L ++ L + + A L ++ + Sbjct: 10 IIDRYLVREAAGAALAVLAVLFAVLSANQLIDYLADAAG-GDLPGEAVAALMGLQILRYL 68 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IP + ++ L R SEL + A G+ + + ++ ++ + + + Sbjct: 69 GVVIPAALFLGIVLALGRLYRDSELPVLAACGVGPARQMRGLLLLALPVAVGVGALSTVA 128 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A +Q D ++ + ++ Sbjct: 129 APWASHTADVYAEQAARTADLGALQAGRFIGGGDAGTVYASRTDGDGVLREVFAHARDGE 188 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + + + Y +D T + + + + Sbjct: 189 LETVIRADRGRQLIDPETGQRFFVFEDGHRYDGHPGQLDWRVTDFDRHGLL----IDTRE 244 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + + + + + + +P+M+V ++L+A ++ R + Sbjct: 245 PREVSRDREGTPTAELWAAGGL---QDRAEIEWRLSMPVMVVVLSLLAVPLAKAEPRDGR 301 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + +++ + + ++GI+ +L +++++ ++ Sbjct: 302 YGK-LLSAVLVFVAYFQLLSSGREWLEAGIVPAPLGLWWVHLLAG-VAVVLWTRR 354 >gi|328949933|ref|YP_004367268.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450257|gb|AEB11158.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 346 Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 110/353 (31%), Gaps = 15/353 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + L L ++L+ L E+ + A RVP + Sbjct: 3 TLERYLLREVGAYLLGGLTVVVLLLLGGVLFEVFAPLLAR-GADPLAVGQYLAHRVPEAL 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +P L ++ + SEL + A GIS ++L V + LL + + Sbjct: 62 VRGLPIAYLFALLLALSRMAEDSELKVLLASGISRERVLLALVWFAALLALMGFVAGESW 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++Q + + + + K + Sbjct: 122 VPQQLQKARQVLRQAILAKPRALLQPGTFFTDAYGRLVYVGRVKDDGIAEIRVLAPGEVL 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ-KFSE 242 ++ L+ + + + + ++ + Sbjct: 182 TAASGAF-----------VEGRLFLEDGMRVTFEGARPRTIARFARGTMPLNELAFEPPA 230 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 A+ + E+ ++ +S + ++ T ++ P ++ L A ++ Sbjct: 231 SVANLTLAELRARIQEFKRSGLPYHAE-ATAYWRKWAEPAATISFALFAVGLAFWML-GG 288 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + F Y ++ + G+ G L PV AA P +L + ++L Sbjct: 289 SRSLGMVGVVTLTFAYYATWSVFRIMGEQGALPPVIAAWGPNLLYALAAGVLL 341 >gi|145631588|ref|ZP_01787354.1| predicted permease [Haemophilus influenzae R3021] gi|144982788|gb|EDJ90314.1| predicted permease [Haemophilus influenzae R3021] Length = 367 Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 126/356 (35%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKL-----KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 K ++ + +L + N L K+V + + + Sbjct: 181 KQTKPSVVTAEKGELIALPNGDQVLNLKNTKRVEGTSVLPDFRITHFDEYRAYLGYQAAE 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 +++ A + ++I + A+ + ++ I + L + M LIA +S Sbjct: 241 NTNDEAAELTLSQLID----------LDSSSAKAELHWRITLILAVPLMALIAVPLSRVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + KS G +G L + I L++++ Sbjct: 291 PRQGRFAK-ILPALLLYLIYFLLQSSFKSAGAAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|320537761|ref|ZP_08037684.1| hypothetical protein HMPREF9554_02438 [Treponema phagedenis F0421] gi|320145384|gb|EFW37077.1| hypothetical protein HMPREF9554_02438 [Treponema phagedenis F0421] Length = 356 Score = 89.8 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 112/356 (31%), Gaps = 3/356 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + + T L +L ++L+ + DL ++ + P Sbjct: 1 MKILQRYLLQIFFPTALVAILFFILLLEIGDLFANLPTYL-TNGVGLAPILQVMYFYFPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +P L L +EL A G+ IW L+ P V+ + + + Sbjct: 60 CISFAMPLGVLFAGAYTMGTLYARNELTSVFASGMPIWTLVLPLVILGFIFSVGMFFFED 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + L + + ++ I + +N + Sbjct: 120 RVVIHTQYKKNRLTAKLLETDKDLSTNDIVVLSENNKIIYSAEVYDAETKNLLNLQIIVR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + K++ A + K + + G+I + FQ+ Sbjct: 180 TDDGEIEKVVTTAVAIWEGDAWELTKPAVYIFSKNGQIQFTDKLAAKEFTEAPENFQRNI 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S E + ++ + Q+Y P + + + SV F R Sbjct: 240 TSIDELSVSEAATYIQKLKRTGRPYTEE-LAQYYRRFSFPFTIFLVLFFSVSVGGRF-RK 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N + + + + + Y + K + P+A AL+P ++ SLSI +L Sbjct: 298 NILLMSLLFSLLIATVYYVTEMVTMLLAKWEYISPLAGALLPFLIFTSLSIFLLRH 353 >gi|87198521|ref|YP_495778.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] gi|87134202|gb|ABD24944.1| permease YjgP/YjgQ [Novosphingobium aromaticivorans DSM 12444] Length = 414 Score = 89.4 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 124/360 (34%), Gaps = 8/360 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L + A L+ + + ++ + + +S + A +P Sbjct: 8 DRYIARLVFVPMLSVFVLAASLLILDKMLKLFDFVATQGG-PVSVVFKMLANLLPEYASL 66 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP ++ + F L +SEL + RA+G+S +LL + +I L +L+++ + Sbjct: 67 AIPLGLMLGILFAFRKLAMSSELDVMRAVGLSYTRLLRVPYMFAIALAALNLLIVSYLQP 126 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 L + + + + + + ++ + Sbjct: 127 LSRYYYEQLQFELRSGALGASIRVGEFNSLQDRTALRVDASRDEGRDLRGIFARIQTANG 186 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI------PIDKNSTTLNIPIKMDGFQK 239 + I R+ A + + ++ + Q + P + + ++PI + ++ Sbjct: 187 QVMVISAREGRFFANRESPDTVILRLTDGQIVQDGPGIASPRVLSFASHDLPIDLPRIEQ 246 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP-LMLVAMTLIAASVSLEF 298 F ++ + Y + + + R +++ + ++++ + + A Sbjct: 247 FRQRGDADREYFLPELLQIGWNDRYSEEIRNQSKASLNYRLVEVVMMFLLPLLAVALAVP 306 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + V I + + + G + PV A P ++ +L + + + Sbjct: 307 PKRSTSALGVFLSIVLVVAYHKVNQYGQDVAALGRMDPVIALWGPFVVFAALIVWMYWRI 366 >gi|300718541|ref|YP_003743344.1| permease [Erwinia billingiae Eb661] gi|299064377|emb|CAX61497.1| putative permease [Erwinia billingiae Eb661] Length = 366 Score = 89.4 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 117/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLTLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V + I + + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTAIVAAVNVAWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ Q K N + Q + Q +FI K +++ Sbjct: 121 GPWSSRYQSEVTQNAKANPGAAALAAGQFQQSGDGQSVMFIENVKGNNFGNVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + ++ + ++ + Sbjct: 181 GNARPSVVLADKGHMTQGPDGSQIVTLDKGTRFEGTAMLRDFRITDFENYQAIVG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++F++ + + ++ M L+ +S+ R + Sbjct: 236 HQDVVLDPNDAEQMDFKTLAQSDKPEFRSEFHWRLTLVFSVLVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G+ L P + + + L++L+ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSSGQKARLDPALWMWVVNLSYLGLAVLL 345 >gi|51246435|ref|YP_066319.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] gi|50877472|emb|CAG37312.1| hypothetical protein DP2583 [Desulfotalea psychrophila LSv54] Length = 351 Score = 89.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 110/316 (34%), Gaps = 6/316 (1%) Query: 47 SISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFV 106 + + + T P I +P +++ + F L+ EL+ +A GISI+++L P Sbjct: 3 DLQILSAYSPTSFPNIFLYTLPMASMLGITICFSRLSTDMELLALKAGGISIYKILPPVF 62 Query: 107 VGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS-----NPQQD 161 + + + + + + E L Q Q + + Sbjct: 63 LVASAITLIAFYFSTQLIPASELAMKKLSYQILKEKIDQGIQAHKFTDAMGDIVIYVDKV 122 Query: 162 IFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI 221 TI + ++ I + G I Sbjct: 123 DKETGDWHNVWVSDMRGVKQPTITMARSGSMKSNSKQMSITIKLTDGSLHRPEEQGTEII 182 Query: 222 DKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP 281 T+N+P++ G F S E++++ + +F+ +++P Sbjct: 183 TFKDYTINMPLETGGKNIFMLHKRLLSMPELLEQAKRWGNESKKRGRIYLIEFHKRLILP 242 Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + + ++ +A + L+ +R + I + G+ + Y + T+ K ++G + + A Sbjct: 243 IGCLMLSFLALPLGLQ-ARPGKKAIGIPVGLGIFIVYYILHTVGKELAEAGTVPLIPALW 301 Query: 342 IPVILTISLSILILLQ 357 +P +L L+I + + Sbjct: 302 LPNVLFFLLAIFWIYR 317 >gi|288962055|ref|YP_003452365.1| predicted permease [Azospirillum sp. B510] gi|288914335|dbj|BAI75821.1| predicted permease [Azospirillum sp. B510] Length = 385 Score = 89.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 121/359 (33%), Gaps = 11/359 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY F+ L TLY G + +++ + + + L VP + Sbjct: 4 LQRYLFRNLLIATLYSTAGLTLTIWLSQSLRLIE-IVVSAGAPMGMFLWLLLLTVPTFLG 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + + + + SELV+ RA G+ + L P +V ++ + +++ I Sbjct: 63 VVLPLALVGAILFTYNKMTTDSELVVMRAAGVGPFSLSTPALVLAVAVMAIVLVLNVWIT 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWED 178 + + + + + + + + + +D K+L + D Sbjct: 123 PAAHRELVRMEYAVRSDYSQLFLREGVFNEVGDRFSVFLRDRDSDGNLHKVLIHDGRQPD 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + D ++Y+ + + ++ ++ + L Sbjct: 183 KPVTIMGDRALMQTGADGTRFVVYDGNRQELDRKTNRLSQLFFERYAVDLKAVAP--QAA 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 RS +++ + + AE F + + A+ ++A +S EF Sbjct: 241 DRWPDARERSTEDLMSGNVPAQDDRMRRGLIAELHHRFSSPLLALTFALVALSALLSGEF 300 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +R Q V + L + S + +PV+ + ++ ++ + Sbjct: 301 NRRGQSS-RVTIAVLLVMGLQAGALGLTSLAGKATVFVPLMYAMPVVALLP-ALWVMSR 357 >gi|300900316|ref|ZP_07118495.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300356206|gb|EFJ72076.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 315 Score = 89.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 99/316 (31%), Gaps = 2/316 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S ++ + + ++ + + P++ +AM L+A + RS Sbjct: 240 MPGNTFSVRQLNHYIHYLQETGQPS-SEYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 298 Query: 302 NQPRIIVAYGIFSGFM 317 +A G+ G + Sbjct: 299 PGMGSRLAVGVIVGLL 314 >gi|262277385|ref|ZP_06055178.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] gi|262224488|gb|EEY74947.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] Length = 365 Score = 89.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 144/362 (39%), Gaps = 5/362 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGEL--PNYSISRGAVLAATRV 59 P L +Y K + + + F + L+ + + E + + R +L + Sbjct: 6 PRTLIKYLIKEFSFSLMIFTVIFSSLIILTTFIQEITFFQEKEVSDNFLLRMLLLTFIKS 65 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P +I FI L I + + +E+V G S+ + + S LGI +++ Sbjct: 66 PTLIINSSSFIFLFAGIFFYVKFMKNNEIVPISLSGFSMNFITLVPGIFSFFLGIVIIII 125 Query: 120 INPIATSGEKIGIDLIQQW-KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 +PI++ K + + + K++ S W++ I A K+ + Sbjct: 126 FSPISSELSKYYESIKKNYSKNDNLIVMSATGIWIKEKKNDNIYIIRADKLSGNDFAKLK 185 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 SI NK R + D II + +K+ R NS T I ++ + Sbjct: 186 NISIYTFSMNKFKERINGDNGIIVKNNLKITPANLVSDVRNI-SLNSYTYISKINLENIK 244 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S + + ++ K F +F+ + +P +L AM +++ +++ Sbjct: 245 NYFVNADTFSIWSVKNALNDVRKMGYF-GEEIIIKFHKYLSLPFLLFAMIVLSTFFTIKM 303 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + I GI +G ++Y + + GKSG L + + +PVIL SI IL+ Sbjct: 304 NFTFNNFIYAFLGILTGIIVYFFYDLSIAVGKSGKLPLILSVWMPVILINVFSIYILINN 363 Query: 359 ED 360 ED Sbjct: 364 ED 365 >gi|313680814|ref|YP_004058553.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153529|gb|ADR37380.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 335 Score = 89.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 104/354 (29%), Gaps = 21/354 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L L + LV DL + + + ++ L R+P + Sbjct: 2 LQRYLLREILTPYLLGTLLFIGLV-TTDLLSSLSGVFLSRGTTWTQVGELVLYRMPYTLG 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V R SEL A GI+ +LL P + + + + + Sbjct: 61 VALPLGLVFAVLVALARWIRDSELKAVYAAGIAPVRLLAPVLGLAAFVAAVAWVNAGWVK 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + DLI + + +T Sbjct: 121 PEAQARYDDLIYEIYYGHAPSGVLTNAAYAPQGLGVYYARRVYPDDAGGGRLQGVRVVTP 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D AD + + LK + G P + L P + + E Sbjct: 181 DG-----AVWSADEGVWKDANWVLKNAWKTAPGARPEFWETIPLPFPSRFVEKKTTYESL 235 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 E+ K + +A + ++A+ +AA V L + Sbjct: 236 PMAELRELAK-----------VDPQARFPLQRRHADAVGVIALAWLAAVVGLSL---REA 281 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + F Y + T+ + ++ P A + ++ +L++ + Sbjct: 282 AWAFVAVVLLIFGYYVLWTLAAQLARFAVVGPY-GAWLADVVYFALALAGTRRL 334 >gi|118590094|ref|ZP_01547497.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] gi|118437066|gb|EAV43704.1| permease YjgP/YjgQ [Stappia aggregata IAM 12614] Length = 395 Score = 89.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 118/360 (32%), Gaps = 11/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY + + + +V+ + + +I + + +P Sbjct: 1 MKTIERYIIRRTVYAFTLTIAAMTGVVWATQALRQLDLVTSK-GQTIVQFIGITMLALPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I + PF ++ I+V +L+ SEL++ A G S + +L P ++ S+++ + T + Sbjct: 60 LIVIVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVMLFSLVVMLLTASMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +G I + + + ++ + + + + T Sbjct: 120 YVAPAGLAQLRTEITRVRADLVANIVKPGRFITVEDGLTFHIRNRSGKGTLDGLLMHDTR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGF 237 A V ++ + + S ++ + Sbjct: 180 DPETAFTYQADTGQIVEAADRTLLVMQNGTIQRRPKQQGDISIVRFQSYAFDLSNLIPEA 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS-- 295 + + + RS ++ + + + + + + PL +A LI + Sbjct: 240 GEPVYKASERSTLNLMSPGRHDEYA-LKNPDKLVQELHERFSQPLYCLAFGLIVFAFLGK 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV--ILTISLSIL 353 +R + V I S +L T + + + +L ++P+ + +SI Sbjct: 299 ARTTRQGR-GFAVLGAICSCVLLRTTGFGVTAISGTSTVLLSLLYVVPITGAVLALISIF 357 >gi|226357374|ref|YP_002787114.1| membrane protein; permease [Deinococcus deserti VCD115] gi|226319364|gb|ACO47360.1| putative membrane protein; putative permease [Deinococcus deserti VCD115] Length = 368 Score = 89.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 42/364 (11%), Positives = 113/364 (31%), Gaps = 12/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 RY L + L ++L + L E+ + + A + A VP Sbjct: 1 MKRFERYVLAEILPLLVGALASVIVLFVLAALQEVIAPLLAKGARPLL-VARVLALNVPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P + ++ L+ SEL + A GI +L P ++ + + + L+ Sbjct: 60 AAARALPIALMFATLLGLSRLSSDSELKAALASGIPARRLYRPVLLLGLGVTVLAFLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQK---SDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + + + Q+ + + + + + + D Sbjct: 120 GLLPRTKIEERKVKQEIVFDNPRVIGLGAQEPGGQSLVLRDALGRAISVGEVRAGGELRD 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLK-KVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 +T+ + A + + L+ + + + + Sbjct: 180 LRIVTMQGGSVPREVITAREGRLKSGSNVLELQGGQRVTYQDGRPVTILSFERGTLPVQD 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF------YFLIVIPLMLVAMTLIA 291 + ++ + + + + PL +A+ A Sbjct: 240 VQADLDTGGKALKANYLPLRELLARTNSYRQQHIQAPAEFTALHQKFAEPLAALALAFFA 299 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 S+++ +S + + + + + F Y ++ + G++G + V AA P ++ + Sbjct: 300 VSLAVFTFQSGRD-LGLVWALLLAFAYYATWSVFRIMGENGAIPGVLAAYAPDLIAVVAG 358 Query: 352 ILIL 355 ++L Sbjct: 359 AVLL 362 >gi|163743163|ref|ZP_02150545.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] gi|161383580|gb|EDQ07967.1| hypothetical protein RG210_14720 [Phaeobacter gallaeciensis 2.10] Length = 376 Score = 89.4 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 117/355 (32%), Gaps = 13/355 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 YL +F L + + ++ + +++ S A +P +++ ++P Sbjct: 1 MLSQYLLFFGFFALILVAVFWINRAVVLFDRLIG-DGQSALVFLEFTALALPNLVRMVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 ++ V LN SEL + RA G S WQ+ P +V ++ + ++ + + + Sbjct: 60 VAAFAASVWVTNRLNSESELTVLRATGTSPWQMAKPALVFGLITAVMMSILTHVLLPASI 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGA------KKILPENHIWEDFTSI 182 + N + ++ + + + + Sbjct: 120 ATLEQRESEVARNVTAKLLSEGDFLHPARGVTFYIGRIDPDGTLNDVFLSDRRNAAESVT 179 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 K ++ + ++ + + + + + +I + ++ + Sbjct: 180 YTGGKAYLVRDGERTHLVMVDGMSQRINTETQRL--SSTIFSDFSYDISSLANKAEEKTR 237 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EFSR 300 + E++ + + + + L+ VA+ LI + + FSR Sbjct: 238 NIRAIPSLELLGDRAKLVADGPYSAGALAEELHLRFARALVCVAVVLIGFAALMLGGFSR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + + F+ + + ++ L P+ IP ++ + + ++ L Sbjct: 298 FGVWRQALLAFVLLIFVEGLRGVVSEPVLQNAELWPLI--YIPTLIGLLVGLVFL 350 >gi|78212778|ref|YP_381557.1| permease [Synechococcus sp. CC9605] gi|78197237|gb|ABB35002.1| possible permease [Synechococcus sp. CC9605] Length = 386 Score = 89.4 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 107/328 (32%), Gaps = 16/328 (4%) Query: 33 LNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISR 92 + E+ QM + N I+ + +P + +P TL+ ++ VF L+ SEL R Sbjct: 45 MFELVRQMVDK-NLPITIAVQVLLFSIPRWLAFSVPIGTLMASLFVFTRLSANSELTALR 103 Query: 93 AIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 ++GI+ ++++ + S+++ +FT ++ + + ++ +++ ++ Sbjct: 104 SLGITTVRMISAALALSMVMTLFTFVLNDVVVPRSQRYAEVTLKRSLGRSLASETGRDII 163 Query: 153 MQISNPQQDI----------FIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIY 202 + D + + + + + + R D + Sbjct: 164 YPRFGTRFDSDGEEDGKGLNQLFYSRKFQDGEMADVTVLDFTRSGFTQMLRADRAIWNED 223 Query: 203 NDKVKLKKVVEYQYGRI----PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 D + + + + + E ++ Sbjct: 224 QASWDFLDGQILTLAANGSSTKADFDRYVYPLGSGPVRLAGIEKDAVNMTVAEALQAQRL 283 Query: 259 SNKSNIFHNYR-AETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 ++ R + +P+ + L A++ + S + + + Sbjct: 284 YEEAGSIKEARKIRVRIQEKFTVPMACLVFGLFGATLGAQPSYRSSRSFSFVLTLGIIAV 343 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVI 345 Y I S G G L P+ AA +PV+ Sbjct: 344 YYVIGFSFSSLGVKGTLPPILAAWLPVM 371 >gi|290473524|ref|YP_003466394.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] gi|289172827|emb|CBJ79598.1| putative transmembrane protein, transport [Xenorhabdus bovienii SS-2004] Length = 366 Score = 89.0 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 117/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L E+ + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVEVLG-AAVEGSVPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGVLMTFSKLYTESEITVMHACGLGKGVLVKSALILALFTSMLAAANVLWF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K ++ K N + + ++IG K +++ Sbjct: 121 TPWSSKYQEQVLADAKANPSLAAIMEGQFKPSRDGNMVLYIGDVKGNNFENVFLAQLRPV 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + N +Y + ++ + + Sbjct: 181 NNQRPSVVIADGGHMEERPNGNQVAVLHQGVRYEGTALMRDFRITDFKNYQAVIGHKAAD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + ++ + + + ++ + + + ++ M L+ +S R + Sbjct: 241 IDSDKVEQ-----KTFSQLWHKGDEDSRAELHWRLTLIVSVLVMALLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G G L P + +L++ + Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNGGRGKLDPAFWMWLVNGAYFALALAL 345 >gi|183600430|ref|ZP_02961923.1| hypothetical protein PROSTU_04001 [Providencia stuartii ATCC 25827] gi|188020226|gb|EDU58266.1| hypothetical protein PROSTU_04001 [Providencia stuartii ATCC 25827] Length = 365 Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L M++ F +I N L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFVLMLIFFSQKSIDILG-AAVQGNIPSDLVLPLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+ L+ +V + L + + I + Sbjct: 61 QLILPLSLFLGLLMTYSKLYTESEITVMHACGLGKSVLVKAALVLATLTALVAIGNIAWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ K N + + ++IG K +++ T Sbjct: 121 LPWSSQYQEQVLADAKANPGLAAMVEGQFKTTKDRNIVLYIGDVKGNDFKNVFLAQLRAT 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + + + +Y + ++ + Sbjct: 181 NEQRPSVVVADSGYMREDADGRQIVVLDEGTRYEGTALLRDFRITDFKNYQAVIDHKPSD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + +++ + +F++ + I +V M L+ +S R + Sbjct: 241 ARNDRVEQ-----KNMLQLWKANDFDSNAEFHWRLTIVFSVVVMALMVVPLSEVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + +++ + G + P A + ++L+I++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSTLRNSAEKGDVDPKYAMWAVNLGYLALAIIL 345 >gi|328949932|ref|YP_004367267.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] gi|328450256|gb|AEB11157.1| permease YjgP/YjgQ family protein [Marinithermus hydrothermalis DSM 14884] Length = 335 Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/354 (11%), Positives = 90/354 (25%), Gaps = 21/354 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L L + L+ DL + + + + R+P + Sbjct: 2 LGRYLLREVLPPYLLGTLLFIALI-TTDLLASLSGVFLRQGTPLVEVLQIVLYRMPFTLG 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + ++ R SEL A G+S +LL + S ++ + + Sbjct: 61 IALPLGLVFAILIGLARWVRDSELKAMYASGVSPLRLLPVLLGLSAVVAGGVLFNAAWLK 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L+ + E+ + Sbjct: 121 PEAHARYEQLLYRVYYGTVPSGVLSNQAYAPEGLGVYFAARIYPDGQGGGRLENVRVVEP 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R + + + L+ ++ L P + E Sbjct: 181 SGALWSAAR-----GVWQDARWVLEDAYRINPDGTVETRSRVPLPFPAQFVPPTTSYEAL 235 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 E+ + + A ++A+ +A V L + Sbjct: 236 PLGELRELAR-----------VDPEARFPLQRRYADAFGVIALAWLAGVVGLGL---REA 281 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + F + + T+ + ++ A +P + L+ + Sbjct: 282 AWAFVAVVLLIFGYFVLWTLAAQLARFALVGAY-GAWLPNAVYFLLAAWGTRRL 334 >gi|23016381|ref|ZP_00056138.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 372 Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 105/362 (29%), Gaps = 10/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M GI RY + L ++ ++++ + SI L +P Sbjct: 1 MSGI-TRYMMRQMLVGMIFVSAALACVLWLTQSLRFVEMIVNK-GLSIGAFLKLTILLMP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IIP V + + L EL++ RA G+S L P ++ + + L+ Sbjct: 59 GFLVVIIPISLFAVVLFTYNRLIADRELIVLRAAGLSHLSLARPAIILGLAVSAVGYLLS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + ++ +++ + + + Sbjct: 119 CWIIPHTVRSFHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHDK 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKL----KKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + R + + ++V + ++ T++ Sbjct: 179 RHPQRAVTLMAERGALVYTEQGPRVLMINGNRQEVTPGTGKLSLLYFDNYTVDFNTATGN 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 RS E++ R +++ + + PL + L+AA+V L Sbjct: 239 KPDRFRDARERSTLELLSMDDSMENKGEL--RRFKSELHSRLASPLYNLGFPLLAAAVLL 296 Query: 297 EFSR-SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + V + + + SG L V + L I+ + +L Sbjct: 297 TSGFDRRGQTVQVMVSAALMVAVQALALGASNLS-SGNLAFVPLIYLNATLPIAFGLWVL 355 Query: 356 LQ 357 + Sbjct: 356 AR 357 >gi|117618567|ref|YP_858153.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559974|gb|ABK36922.1| putative permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 368 Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 116/344 (33%), Gaps = 6/344 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY F+ LKT L L +++ +I + + L +P + Sbjct: 2 IVFRYLFRETLKTQLAVLFVLLLIFVSQQFIQIIGDAAD-GEVPTRLVSTLLLLNLPNMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + + L SE+ + A+G S ++ +V ++L + Sbjct: 61 LLMLPISLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMVLALLTAAVAAFNTGWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A ++ +I ++K + +M++ + + + + + + Sbjct: 121 APQAKEREYQVIDEFKADPGISFLQAGRFMELDK--GRLVAYIQDLNDKGSKLQKIFVLQ 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K A ++ D L+ + R N+ I + +Q Sbjct: 179 RSQDGKPPSVVVATEGVVTVDSNGLQWLTLKDGSRYEGHFNTRQFQISEFDEYSLVIRQQ 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 RS + + + + + + + + +PL ++ +T + ++ R + Sbjct: 239 EMERSNRK--AAAKPTMELLGTQDNQLMAELQWRLSLPLSILVLTFLVVPLARVNPRQGR 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 + I + +++ +S SG L + ++ Sbjct: 297 YAK-LLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLVY 339 >gi|291616051|ref|YP_003518793.1| YjgP [Pantoea ananatis LMG 20103] gi|291151081|gb|ADD75665.1| YjgP [Pantoea ananatis LMG 20103] Length = 366 Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 115/351 (32%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEVPTNLVLTLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V + + + + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + Q K N + S+ +F+ K H++ Sbjct: 121 GPWSSRYQEQVTQNAKANPGAAALAAGQFQTSSDGSAVLFLENVKGNQFGHVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + ++ + ++ + Sbjct: 181 GNARPSVVLADSGHMEQKKDGSQIVTLDKGTRFEGTALLRDFRITDFTNYQAYVGYKQAT 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + ++ I + ++ M L+ +S+ R + Sbjct: 241 LDPNDVDQ-----ATFATLLSNKTPEFRAELHWRITLVFAVLVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G G L P + I ++L+I++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSSGAKGRLDPAIWMWVVNISYLALAIVL 345 >gi|260576761|ref|ZP_05844746.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] gi|259021013|gb|EEW24324.1| permease YjgP/YjgQ family protein [Rhodobacter sp. SW2] Length = 376 Score = 89.0 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 111/359 (30%), Gaps = 11/359 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY L +F L + + ++ + +++ S + +P +I Sbjct: 4 FDRYLLSQLLALFGFFSLVLVAVYWINRAVLLFDKLIG-DGQSALVFLEFSLLTLPSVIM 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++PF V + L R SELV+ +A G S +L P + +++ ++++ + Sbjct: 63 LVLPFSAFVATVYGINRLTRDSELVVMQATGFSPLRLARPVAIFGLIVAAMMAVLLHVLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + +N + +M + ++ T Sbjct: 123 PESRATLAQRTLEVSENLAARFLMDGQFMHPAKGITLYIREISPKGELRDVFLADTRSPT 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKL----KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R V L + + + T ++ + G + Sbjct: 183 SHATYTASRALLVKGDSGPKLVMLDGMVQNLNNKEGRMSVTRFADFTYDLATLIAGPKVL 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFS 299 ++ S Y+++ + + Q + + P++ +A LI S + L Sbjct: 243 KRNASALSTYDLLWPSAEILQETAETPEALWFQAHNRLAQPILGLAAALIGFSALLLGAF 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS--GILLPVAAALIPVILTISLSILILL 356 +A + + I T M S G AA + ++++ +L Sbjct: 303 SRFGLWRQIAVAVALMITVQGIATTMLSLGLKQPEFWPLAYAA---PLAGLAMAAGLLW 358 >gi|260432791|ref|ZP_05786762.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] gi|260416619|gb|EEX09878.1| permease YjgP/YjgQ [Silicibacter lacuscaerulensis ITI-1157] Length = 379 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 110/360 (30%), Gaps = 13/360 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 YF + L +F L + + ++ + ++ S A +P +I+ Sbjct: 4 FDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFERVIS-GGQSAMVFLEFTALTLPTLIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + L+R SE+ + A G S W+L ++ ++ G+ ++ + Sbjct: 63 TVMPMAVFAAAVYATNRLSRESEMTVMLATGSSPWRLSRGVILFGLIAGLMMAVISVVLR 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGA------KKILPENHIWED 178 + + + + Q + +M + ++ + + Sbjct: 123 PASVEQLERRQAEVAGDVTAQLLNEGEFMHPAPGVTVYIGRIDLDGTLNEVFVSDRRDRN 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + ++ ++ + S ++ + Sbjct: 183 NPATYSSTSAYLLSDDTGVHLVMVDGVALRLDREGNTLSSTQFQDASYDVSELTRKGDIG 242 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLE 297 + S + E+++ + S+ + + + + VA+ ++ A++ L Sbjct: 243 RRS--IEAVPTSELLRDLDAVAASDGYPRGELVEELHQRFSWIAICVAVAMVGYATLMLG 300 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSG-ILLPVAAALIPVILTISLSILILL 356 + +L + + L PV P +L I +S + L+ Sbjct: 301 SFSRFGLWPQIFAAFTILVLLEGVRGFVSPIVIKDARLWPVL--YGPALLGIVISCVFLV 358 >gi|291287413|ref|YP_003504229.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] gi|290884573|gb|ADD68273.1| permease YjgP/YjgQ family protein [Denitrovibrio acetiphilus DSM 12809] Length = 349 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 104/356 (29%), Gaps = 10/356 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L +Y K + ++L+ + L ++ + N +P Sbjct: 1 MKLLHKYILKEIYPIFFLGNVFFVLLLLLDKLIDLADLFFTK-NVPAFLIIQTIVYYLPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP ++ ++ F L+ SE+ RA G P ++ + + +++ Sbjct: 60 FLVITIPTSAMLAVMIGFGRLSSDSEVTAMRAAGAGKKFFTTPTIIFGLTAFLLGIMMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +G + I + + I A K + Sbjct: 120 WLMPAGSRNAIGNLSKIAKLVSINDMKEKELYDELPG---IVFYAVKKDSNAKYRKMVII 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + LK + Sbjct: 177 DKAQHSVITANEAEILPSGNAGLLMNLKNGRIVTLNEDGKHSKINFDTFTLNSPLIDAKD 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S + + N + +F I +P + M++ S+ + F RS Sbjct: 237 ISVNSERIMQTKDLIE-----NFQEAPLYKFEFSKRISMPFAAIIMSIFGMSLGIFFHRS 291 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + I + + ++F +SG + P AA +P IL +++ + Sbjct: 292 GR-SLAIPITIAVVAVYNILFFAAENFAESGRIEPFLAAWLPNILFALIAVFFYRR 346 >gi|148827127|ref|YP_001291880.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Haemophilus influenzae PittGG] gi|148718369|gb|ABQ99496.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Haemophilus influenzae PittGG] Length = 367 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 124/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P + Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K +I + +L + N LK + D T + G+Q Sbjct: 181 KQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + + S + + ++ I + L + M LIA +S R Sbjct: 241 NTNDEVAELTLSQLIDLDSSSA-------KAELHWRITLILAVPLMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + KS G +G L + I L++++ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|330993929|ref|ZP_08317859.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] gi|329758875|gb|EGG75389.1| hypothetical protein SXCC_03824 [Gluconacetobacter sp. SXCC-1] Length = 388 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 99/360 (27%), Gaps = 8/360 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL Y + L + + L+++ + + S+ L +P + Sbjct: 17 ILDGYMLRQLLLALVATTGALVTLIWLTQSLHFVSLVVGR-GLSLRVFLELTGLLIPSFV 75 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P T VV ++ L EL + +A G+S + P ++ + + + +++ I Sbjct: 76 AVILPITTFVVVQFIYQRLGGDRELTVMQAAGLSPALMARPGLMCAAIATLVCLVLNVWI 135 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 Q ++ + Q+S+ K + I + Sbjct: 136 VPVSYHAFRQYEFQIRNRMAAFLIQDGVFTQVSDNMTVYIRARDKDGTLHGIMVEDDRTP 195 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDGFQK 239 + + + + +V L + N T Sbjct: 196 GAEATILAEEGNLVIINDQP-RVVLFNGSRQEIDSHTGRLNVLTFTRNTIDLSSPHTAHT 254 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 S +++ E AM + ++ S Sbjct: 255 RLPDANELSIAQLLHPDLHQYSRRDESKMFIEAWRRLSTPFCAFSFAMIGLVGAMGGSHS 314 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R V I + + + ++++ L + + + + ++L E Sbjct: 315 RQAGIVRPV-LAILAVVAVQALTLLVQNLASRN-LQLMPLMWLCTVGPGIVCAIMLFWPE 372 >gi|330874293|gb|EGH08442.1| hypothetical protein Pgy4_05807 [Pseudomonas syringae pv. glycinea str. race 4] Length = 213 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 78/217 (35%), Gaps = 8/217 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y+++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDT--YTLADALSYVMLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL + VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGEEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 D + ++ A A D +LK V + Sbjct: 173 RYRFDDQRHMLTSSFAKEANFKTDYWELKDVSTTHFN 209 >gi|262341091|ref|YP_003283946.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272428|gb|ACY40336.1| putative YjgP/YjgQ family permease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 381 Score = 88.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 115/371 (30%), Gaps = 17/371 (4%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y + ++ + + +++ +I I Sbjct: 5 KKLDLYMIRLFITPFFIIFSTIFAVFMIQFFWSQIDELTGKN-INILIIIKFVFYFGISI 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I + P L+ +I+ F +L+ EL+ ++ GIS+++++ P + + +L I + Sbjct: 64 IPLVTPISLLLTSIITFGHLSENQELIAIKSSGISLFRVMKPILGITCILSIGLYFFSDL 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIP--------WMQISNPQQDIFIGAKKILPENH 174 K L + K +++I + + + Sbjct: 124 AIPKAIKQAKKLGYKISSTHPSFKLKEGIFVNLLPDFFIKIDRKKNQQLHNIFIFFYDKN 183 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + + + + + N + + + Q + ++ N I Sbjct: 184 LLVNTILSQKGFFIPNKDQSEFIQFKLINGILYSENTNKEQSSYQIVQFDTLIQNFQIPF 243 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ-------FYFLIVIPLMLVAM 287 K + + S + +I+K++ K H + P+ + M Sbjct: 244 YEEIKNLDDYESYNTQNLIQKINLLKKEKSKHQKENIHKLAKLQLELQKKFTFPVTCIIM 303 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 L A + R + + YT++TI ++ + + P A IP + Sbjct: 304 FLTGAPLGA-IIRKGGIGYPTMIALAIFIIYYTLLTITQNKVEKVEIYPWIGAWIPNFIF 362 Query: 348 ISLSILILLQK 358 +SI + + Sbjct: 363 FPVSIWMTYKT 373 >gi|254427836|ref|ZP_05041543.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] gi|196194005|gb|EDX88964.1| putative permease, YjgP/YjgQ family [Alcanivorax sp. DG881] Length = 372 Score = 88.6 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 119/362 (32%), Gaps = 9/362 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 +P IL RY + TT+ ++++ + + + ++ A R+P Sbjct: 3 LPLILHRYINRQVFMTTVLVTFILVMVLVSGRFIKYLAEAAAGE-IAADALFLVMAFRMP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +Q I+P + ++V ++ +E+V+ +A G +++ VV ++ + Sbjct: 62 EFLQMIVPLSLYIALLLVLGRMHMDNEMVVLQAGGQGNGRVVRSLVVPILMATTLVGMFS 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + G+ + ++ KD + + + A+ + E + E+ Sbjct: 122 LYVTPRGDAEVNRIFEEQKDRSVLELLTPGRFHVKGSSDSQRATYAEHLNREKGVLENVF 181 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVE---YQYGRIPIDKNSTTLNIPIKMDGF 237 +++ + + V + + + + Sbjct: 182 VADARFESQGEAGRLLTVWAKSGKLVVEEGISYLLLTDGFQYQGKPGQLDYKEVGFKEAR 241 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + ++ + + N A + + + + L + M L A ++ Sbjct: 242 VRIGGEKTDSRPPKVRGRSTQELVDQRADNKAALAELQWRLSLILTVPIMALAAIPLARV 301 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK--SGILLPVAAALIPVILTISLSILIL 355 R + + + + ++ + +S + G L + + + + +++ L Sbjct: 302 NPRQGR-FYRLIPAVLGYMLYVGMLLVCRSAIEDHKGSLPWYLSMVWIHL--SAGAVVFL 358 Query: 356 LQ 357 L Sbjct: 359 LY 360 >gi|319776036|ref|YP_004138524.1| permease [Haemophilus influenzae F3047] gi|329123194|ref|ZP_08251763.1| inner membrane protein YjgP [Haemophilus aegyptius ATCC 11116] gi|317450627|emb|CBY86847.1| Predicted permease [Haemophilus influenzae F3047] gi|327471539|gb|EGF16983.1| inner membrane protein YjgP [Haemophilus aegyptius ATCC 11116] Length = 367 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 125/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + LL +++ F + N L +P++ Sbjct: 2 ILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLG-AAANGNVPADLVFSLLGLGMPIMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVKVALIMSLLTAGIAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++++ K N ++ +N +FI K +++ + Sbjct: 121 SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K +I + +L + + LK + D T + G+Q Sbjct: 181 KQTKPSVITAEKGELIALPSGDQVLNLKNTKRVEGTSALPDFRITHFDEYHAYLGYQSAE 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + + S + + ++ I + L + M LIA +S R Sbjct: 241 NTNDEVAELTLSQLIDLDSSSA-------KAELHWRITLILAVPLMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + KS G +G L + I L++++ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVL 345 >gi|168704909|ref|ZP_02737186.1| hypothetical protein GobsU_35554 [Gemmata obscuriglobus UQM 2246] Length = 366 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 93/352 (26%), Gaps = 9/352 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPN---YSISRGAVLAATRVPL 61 + R F + ++ + L+ + L VIDL + P S RVP Sbjct: 4 IDRMFLWTFFRSYIIVLISLVGLFIVIDLFTHLDAFVNKPGGFVASARHITYYYGNRVPE 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 F+TL+ + R +EL+ + G+ + + P +G+ + L Sbjct: 64 YFDLFGNFVTLIAGAFTVAWMQRNNELLPLLSAGVPTRRAIRPVFLGAAVTLALGPLNQE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE-NHIWEDFT 180 + + I F K + E Sbjct: 124 FLIPEVADALTSQRDDPDQAKAQSLMGAYDSSGIHFEGLAGFRKDKLVKKMCVTFPEHSR 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S + + + L + + + Sbjct: 184 SGMVHLTAQEAVFRPKQGDDPLTGGWLLTDATPDTFTGEIPLNLTVLGTGRFFVKVQDAD 243 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ----FYFLIVIPLMLVAMTLIAASVSL 296 + + I S + R + F+ + PL+ + M + +V L Sbjct: 244 YDAVCRGGAWYIYAATSDLQTMLVDPEPRRRGKLAVLFHTRVTRPLVGMVMVVFGLAVIL 303 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 I + + + K G +L P AA +PVIL Sbjct: 304 GNPNR-HVIISSGLCLIVSAATFLFVIACKYLGDQDVLPPPLAAWLPVILFG 354 >gi|253997951|ref|YP_003050014.1| permease [Methylovorus sp. SIP3-4] gi|253984630|gb|ACT49487.1| permease YjgP/YjgQ family protein [Methylovorus sp. SIP3-4] Length = 366 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/353 (10%), Positives = 115/353 (32%), Gaps = 10/353 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R + + T + L +V + + + + L + + I Sbjct: 5 RSLLQELVGTAIGAFLVLFGIVIAQRVAYYIG-VAAKGSLASDAINTLLGFSMLKFLPMI 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + ++ +R SE+V+ + G+ + + P + +I + ++ + Sbjct: 64 LSLTIFLAVLLTLTRWHRDSEMVVWFSSGMGLAGWIRPVLTFAIPVVAVIAVLSLFVTPW 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFTSITID 185 G + Q K + + + N + ++ + Sbjct: 124 ATNKGSEFRDQLKSRDELASISPGVFKESRNADRVFFVESFDELGNVVKNIFVQSVQHQR 183 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + + +A ++ + ++ Y+ + ++T + E+ Sbjct: 184 LGVVVASQGHRTVADNGDNFLVMEHGRRYEGKPNTAEFSTTEFERYSIRIEPNEVKEEPP 243 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + ++ + N +N + + IP+ + L+A +S +RS + Sbjct: 244 GTAALGSVELLKNHNPANNAEL-------QWRLAIPISAFLLVLLAIPLSFVDNRSGRSA 296 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + +++I++++ G L PV + + L+I + ++ Sbjct: 297 -NMMLALLIYIIYNNMLSIVQAWLTQGKLNPVVGLWPVHVFFLLLTIWMFYRR 348 >gi|328948914|ref|YP_004366251.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] gi|328449238|gb|AEB14954.1| permease YjgP/YjgQ family protein [Treponema succinifaciens DSM 2489] Length = 447 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 117/352 (33%), Gaps = 10/352 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K L L + ++ FV + + + + I+ L +P +I Sbjct: 82 ILVRYIAKELLLYFLICFVFFFVVFFVNQILLLAETILKKR-VPINSVLKLILYCLPNVI 140 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q PF TLV ++ L +E++I RA G +L + +L+ +F+ ++ + Sbjct: 141 SQSAPFATLVGFLMCLGRLVTDNEILIFRASGQRYSLILKSVLAMGLLISVFSFIMNDYF 200 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK------ILPENHIWE 177 G L +Q + + + ++++ I +K + Sbjct: 201 LPIGTLKYNRLFKQIIVSNPAIELESKSIKRMNDSTLVIGNVSKNNVSDIVLFDSEKDGV 260 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + K + + N + L I LNI Sbjct: 261 QRIIMAGNSDVKKSSTPGVIMQLDMNSPIVLSLDKSKTENYESISAEKLRLNIFEDSIIS 320 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF---YFLIVIPLMLVAMTLIAASV 294 + +++IK++ + N R T +P L+A + Sbjct: 321 SSNGTSPREMTSWDLIKRIKKMKQENSSTKKRLNTFILECNKKFSVPFGSFFFALLAFPL 380 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 +L F + + + + +GI + ++ I + FG G P + Sbjct: 381 ALIFGKKDGQTLGLIFGIILSVLYWSATIIGQMFGIRGGYNGFWMMWTPNFV 432 >gi|302338545|ref|YP_003803751.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635730|gb|ADK81157.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 381 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 121/371 (32%), Gaps = 16/371 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I Y K + + + + FV L + ++ +++ +L +P Sbjct: 10 FRIADAYLLKEFFFSFCIAFIFFFFIFFVNQLLLLAEEVLSKR-VGVTKVLLLILYSLPA 68 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ PF L+ ++ + +E+ RA+G+S +L P ++ ++L + + Sbjct: 69 ILAFTFPFSALLGTVMAIGRFSSDNEITAFRALGVSHLRLFFPVMLLGLILSGISFFSND 128 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G L + + + + + + + + + + I + Sbjct: 129 VLLPRGTVQFGRLYRDILYSNPALELEPYAVRRYKDTVLVTGAISDREISDLVILDHDED 188 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKV-----VEYQYGRIPIDKNSTTLNIPIKMDG 236 + + D ++L++V + + ++ NI + Sbjct: 189 QNERMLSAKRAYLEQDEKENGVISLRLEEVFGHTAKKREGDFDYFTADTMEYNILLSSFT 248 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR---------AETQFYFLIVIPLMLVAM 287 + + S + ++ + + +FY + IPL Sbjct: 249 YSINNLTPREMSTAALYGEIQTMEAKKKEDQNKKRFDRTLQLYKIEFYKKLAIPLGCFTF 308 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 A L RS + + G+F+ + ++ + ++ G + A P I Sbjct: 309 MFFAFPAGLLPKRSGRW-VGFVLGLFAAAFYWMLLIVGQTLGVRFQVSAALAMWFPNIFI 367 Query: 348 ISLSILILLQK 358 + +LI L + Sbjct: 368 AFIGLLIYLSR 378 >gi|110833357|ref|YP_692216.1| hypothetical protein ABO_0496 [Alcanivorax borkumensis SK2] gi|110646468|emb|CAL15944.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 368 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 39/356 (10%), Positives = 115/356 (32%), Gaps = 7/356 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + TT+ ++++ + + + ++ A R+P + Sbjct: 2 ILHRYINRQVFMTTVLVTFILVMVLVSGRFIKYLAEAAAGQ-IAADALFLVMAFRMPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P V ++V ++ +E+V+ +A G +++ VV ++ + + + Sbjct: 61 QMIVPLSLYVALLLVLGRMHMDNEMVVLQAGGQGNGRVVRSLVVPILMATMLVGMFSLYV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G+ + ++ KD + + + A+ + E + E+ Sbjct: 121 TPRGDAEVNRIFEEQKDRSVLELLTPGRFHVKGSSDSQRATYAEHLNREKGVLENVFVAD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVE---YQYGRIPIDKNSTTLNIPIKMDGFQKF 240 +++ + + V + + + + Sbjct: 181 ARFESQGGAGRLLTVWAKSGKLVVEDGISYLLLTDGLQYQGKPGQLDYKEVGFKEARVRI 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + ++ + + N A + + I + L + M L A ++ R Sbjct: 241 GGEKTDSRPPKVRGRSTQELMEQQADNKEALAELQWRISLILTVPIMALAAIPLARVNPR 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGK--SGILLPVAAALIPVILTISLSILI 354 + + + + ++ + +S + G+L + + + + L+ Sbjct: 301 QGR-FYRLIPAVLGYMLYVGMLLVCRSAIEDHKGVLPWYLSMVWIHVSAGLVVFLL 355 >gi|302391952|ref|YP_003827772.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] gi|302204029|gb|ADL12707.1| permease YjgP/YjgQ family protein [Acetohalobium arabaticum DSM 5501] Length = 372 Score = 88.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 132/356 (37%), Gaps = 6/356 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 ++ +Y K L L+ I++ L E+ + + ++S L ++P I Sbjct: 5 KLIDKYILKEVTILFLIGLIIISIIMLSSFLFELTDLIIIRK-VALSSVLKLLIYKLPTI 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I + IP L I+ L++ +E+ R ISI++L+ P ++ +++ L+ Sbjct: 64 IVRAIPMSVLFATIIGLGRLSKDNEITALRMGSISIYRLILPLIILGLIISGGNYLLNEK 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + K ++ + + + + + + + + Sbjct: 124 VVPFSNKRFQVIMNETVLKSRMPEIKENIFFKGTRNKLFYIGKYNESQSTVKDIVIYELD 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II + ++ + +Y I+K+ +F++ Sbjct: 184 SKQDYPNIIMANKGRVYKDNKWELNEGYIYKYNNDGNLINKDKFKDITVGFKANINRFAD 243 Query: 243 QF--ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 Q + S E+ +++ F K +++ +P + L+ + +S++ Sbjct: 244 QQSPSEMSIKELKEEIEFLKKIGA-DPNSLLVEYHLKFAMPFSALIFILVGSILSIKGK- 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 N + + + I F Y ++++ +S G++ + P+ AA + + I L ++ Sbjct: 302 -NSKGVNILFTIIIIFFYYLLLSLSRSLGRNEVFSPLVAAWLTNFIFIILGAILFY 356 >gi|298291096|ref|YP_003693035.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] gi|296927607|gb|ADH88416.1| permease YjgP/YjgQ family protein [Starkeya novella DSM 506] Length = 385 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 121/356 (33%), Gaps = 8/356 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY F+ L LL +++++ + + +I + + +P +I Sbjct: 4 LDRYVFRSAASAFLGTLLVLTLMIWITQALRELD-IMTTQGQTILAFVFITSLALPALIL 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + P + F +N SE+V+S A GIS W+ L P V+ ++++ ++ + Sbjct: 63 GLAPAALFMAVAYTLFRMNSDSEIVVSSAAGISTWRFLRPLVILALIVAACCSVLSLELV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + I + + + + + +++ I+ + Sbjct: 123 PAAMRQFRYEISRVRADVVAFIAQPGRFTTLADGMVFHVRERNANGVLGGIFINDARDPK 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ----YGRIPIDKNSTTLNIPIKMDGFQKF 240 + R + + + + ++ ++ + Sbjct: 183 QTNTYLAERGQVVDNKDGTFLILEEGAIHRRTPGKPDSNVVEFQRYAFDLSPFTSNGENA 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + RSF E++ + I + R + + + +PL ++A IA + +L R Sbjct: 243 VYRAPERSFRELLNP-DPKDYVYILESGRFTEELHRRLSLPLYVLAFFGIACA-ALAEPR 300 Query: 301 SNQPRIIVAYGIFSGFMLYT-IITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + +A + F++ + + G + + + I S L L Sbjct: 301 TTREGRGLALAATTPFVIVLQVTSFGLINQIRGNPSVIPFVYLVPAVFIVGSALSL 356 >gi|283833700|ref|ZP_06353441.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] gi|291071386|gb|EFE09495.1| permease YjgP/YjgQ [Citrobacter youngae ATCC 29220] Length = 356 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 101/356 (28%), Gaps = 9/356 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + + + + +++ + +V + Sbjct: 1 MRLIERYIMFEVSRLVAIIVGFLIFIFAIYSAQRYLTDAAN-GTLALTAVLAIVFYKVII 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + L+ SE+ A G S +L + +I LGI L+ Sbjct: 60 ALEMLLPVGLYVSVGIALGQLHAESEITALLAAGSSPLRLYKTVMYFAIPLGILVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D + + + +T Sbjct: 120 FGRPWAYMQIYRLEQQSQSELDISHLRARKFNVNDHGHMILAATISPDTGHLTDMLIYTP 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 H D V L Y+ ++ + + + Sbjct: 180 SENTSSLFRAHCGDITNPSPLTPSVALHSGTSYRLDHHNGQGDNGQIFQRLNIQL----- 234 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +K S + + + I + + M L+A SVS R Sbjct: 235 --KPLMQNPITRRKASSMTALRTSTDPGDTAELQWRISRGINALLMALLAVSVSRVKPRQ 292 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + ++ + + Y + ++ +G L + + IL + +++++ Sbjct: 293 GRFSTLIPLSLLFTCIFYG-GNVCRTLVANGALPVIPGVWLVQILMLFGVGMLIVR 347 >gi|261345122|ref|ZP_05972766.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] gi|282566810|gb|EFB72345.1| inner membrane protein YjgP [Providencia rustigianii DSM 4541] Length = 365 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F +I N + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFVLLLIFFSQMSIDILG-AAVQGNIPSNLVLPLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+ L+ +V ++L + + I + Sbjct: 61 QLILPLSLFLGLLMTYSKLYTESEITVMHACGLGKNVLVKAALVLAVLTALVAIANITWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ K N + + ++IG K +++ Sbjct: 121 LPWSSQYKEQVLGDAKANPGLAAMVEGQFKTTKDNNFVLYIGEVKGNDFKNVFLAQLRTA 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + N + + +Y + ++ + + + Sbjct: 181 NEQRPSVVVADSGYMKEDANGRQVVVLDQGTRYEGTALLRDFRITDFMNYQAVVDHRTTE 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + ++ +F++ + I +V M L+ +S R + Sbjct: 241 VRTDKVEQ-----KTMMQLWNGNDPEINAEFHWRLTIVFSVVVMALMVVPLSEVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + + + + + +++ G + P A + ++L+I++ Sbjct: 296 VLSMIP-AMLLYLIFFLLQSTLRNSADKGDIDPKYAMWAVNLGYLALAIVL 345 >gi|253997571|ref|YP_003049635.1| permease [Methylotenera mobilis JLW8] gi|253984250|gb|ACT49108.1| permease YjgP/YjgQ family protein [Methylotenera mobilis JLW8] Length = 374 Score = 87.8 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 119/356 (33%), Gaps = 11/356 (3%) Query: 5 LWRY-FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L+R+ K + T L + +V ++ + + + Sbjct: 2 LFRHSLIKELISTAAGAFLILIGIVVAQR-AGTLVRLAAKGILPNDAITTILGFNMVKFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + ++ R SE+VI + G+SI + P + + +F + + + Sbjct: 61 PMVLSLSLFLAVLMTLSRWYRDSEMVIWFSGGLSINNWVRPVLTFIFPVILFILALSLFV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSI 182 G Q + D + + +N + F+ ++ T Sbjct: 121 MPWATSKGELYRTQLEARDDLATISPGVFKESANGDRVFFMESFDELGNVVKNIFVQTMQ 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + ++ V ++ Y+ R + ++TT ++ E Sbjct: 181 HQKLGVIVAAQGSRYTEKNGDNFVLMENGKRYEGRRGSAEFSTTTFEKYAIRIEAKEAKE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + S + +S +N +N + + + + IP+ + ++L+A +S R+ Sbjct: 241 EPPSTQSKSTKELVSSANSTN-------KAELQWRLAIPISALILSLLAIPLSALDPRAG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + +++I +++ G L + + L+I + ++ Sbjct: 294 RSA-NFILALVIYIIYNNLLSIFQAWTAQGKLSALVGLWPVHAFFLLLTIYLFRRR 348 >gi|310766279|gb|ADP11229.1| Putative permease [Erwinia sp. Ejp617] Length = 366 Score = 87.8 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 114/339 (33%), Gaps = 7/339 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLTLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ + + + + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++Q K N + Q + Q +FI K ++++ Sbjct: 121 GPWSSRYQNEVMQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGSTFSNVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + + ++ + ++ + Sbjct: 181 GNARPSVVVAQQGHMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + ++ ++ + + ++ M L+ +S+ R + Sbjct: 236 HQAVTLDPNDSEQMSLDTLWHSDKPDFRSELHWRLTLVFSVLIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + + + + + + ++S G G + P A Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSLRSSGSKGRIDPAIAMWA 333 >gi|124267132|ref|YP_001021136.1| putative transmembrane protein [Methylibium petroleiphilum PM1] gi|124259907|gb|ABM94901.1| putative transmembrane protein [Methylibium petroleiphilum PM1] Length = 363 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 116/353 (32%), Gaps = 8/353 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + ++ L+ M +V + L Q + + A+L + I+ Sbjct: 7 LRRDLARSFGATLVVIMTIVITMFLIRTLGQAAG-GSVAAQDVALLLGYVALENLPTILS 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + + + R SE+VI A G+ + + + P + + L + L+ + G Sbjct: 66 LSLFIAVVTTLTRMYRDSEMVIWFASGVGLLRFVPPVLRLTAPLLLLVALLALFVWPWGN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + +L +++ D + + ++ ++ FI D ++ Sbjct: 126 RQIAELKDRYQRRSDVARVAPGQFQSSADGKRTFFIERDTGEGNIARNVFVLERKPDSES 185 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 R V L+ ++ D ++ + + S Sbjct: 186 VTSARTGRIEMDGDQRFVVLESGQRNDINLATGERKLAQF------DSYRVLAGEAVSSG 239 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + K + + R + + I + + + + L+ ++ R + Sbjct: 240 ADNLPPKARSTWDLLTQPSNRHFGELAWRIGLAVGGINLVLLGIGLAGGNPRRAG-SWNL 298 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + + + + + ++ + +++ SG L L+ + L++ +L +E G Sbjct: 299 LFALLAFVVYFNLLNLSQAWVASGKLEIGIVLLLIHGGSFVLAVSLLWWRERG 351 >gi|152973138|ref|YP_001338284.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892750|ref|YP_002917484.1| putative transport system transmembrane component [Klebsiella pneumoniae NTUH-K2044] gi|262045294|ref|ZP_06018319.1| inner membrane protein YjgP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|290512174|ref|ZP_06551541.1| transmembrane protein yjgP [Klebsiella sp. 1_1_55] gi|330016471|ref|ZP_08308444.1| lipopolysaccharide export system permease protein LptF [Klebsiella sp. MS 92-3] gi|150957987|gb|ABR80017.1| putative transmembrane protein, transport [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545066|dbj|BAH61417.1| putative transport system transmembrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037350|gb|EEW38596.1| inner membrane protein YjgP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|289775169|gb|EFD83170.1| transmembrane protein yjgP [Klebsiella sp. 1_1_55] gi|328528832|gb|EGF55775.1| lipopolysaccharide export system permease protein LptF [Klebsiella sp. MS 92-3] Length = 365 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGIPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ G + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q S+ +FI + + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ +L+ + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + H RA + ++ + + M L+ +S+ R + Sbjct: 236 HQAVSADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G + P +L +L++L+ Sbjct: 296 V-LSMLPAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVLL 345 >gi|212710411|ref|ZP_03318539.1| hypothetical protein PROVALCAL_01472 [Providencia alcalifaciens DSM 30120] gi|212686831|gb|EEB46359.1| hypothetical protein PROVALCAL_01472 [Providencia alcalifaciens DSM 30120] Length = 365 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F +I N + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFVLLLIFFSQKSIDILG-AAVQGNIPSNLVLPLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+ L+ +V + L + V I + Sbjct: 61 QLILPLSLFLGLLMTYSKLYTESEITVMHACGLGKSVLVKAALVLAALTALVAVANITWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ K N + + ++IG K +++ Sbjct: 121 LPWSSQYQEQVLADAKANPGLAAMVEGQFKTTKDGNFVLYIGEVKGNDFKNVFLAQLRTA 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + + +Y + ++ + + Sbjct: 181 NEQRPSVVVADSGYMKEDEYGRQMVVLDQGTRYEGTAMLRDFRITDFVNYQAVVDHKATD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + + N +F++ + I +V M L+ +S R + Sbjct: 241 VSTDKVEQ-----KTMMQLWNEDNPEVNAEFHWRLTIVFSVVVMALMVVPLSEVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + + + + + +++ G + P A + + L++++ Sbjct: 296 VLSMIP-AMLLYLIFFLLQSTLRNSADKGDIDPKYAMWAVNLGYLLLAVIL 345 >gi|325282730|ref|YP_004255271.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314539|gb|ADY25654.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 387 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 117/348 (33%), Gaps = 13/348 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y L + L ++L+ + L ++ + S + A L A VP + + Sbjct: 29 YVLSEILPLLVAALSALIVLLMLKGLEDVLAPLLAK-GASPALVAQLLALNVPEAMAFGL 87 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P + ++ L+ SE+ + + GI L P ++ + L+ + + + + T Sbjct: 88 PLALMFAALLGLSRLSGDSEIKAALSGGIPGTTLFRPVLLLAALVTLLSFGINEVLVTRA 147 Query: 128 EKIGIDLIQQWKDNGDKQ----KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +Q + + ++ + + I +G+ T Sbjct: 148 KVQAQSVQRQIVLDNPRVIGLAQTAGGGLVLRDALDRAISVGSVGEDGTLRNLRIVTMQP 207 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE- 242 ++I ++ L ++ ++L+ Y + + Q + Sbjct: 208 GLPPREVITAREGVLQE-GSNVLELRGGQRVSYQGARPVTVLNFETGQLPVQDVQASFDG 266 Query: 243 ----QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + ++ S I T Y PL +A+ A S++L Sbjct: 267 GSGLDPFYLPLGTLKERTDGYRDSGIRSPGDF-TALYRKFAQPLSALALAFFAVSLALYT 325 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 RS + + + + F Y ++ + G++G L AA P ++ Sbjct: 326 FRSG-LNLGLVWALLLSFAYYATWSVFRVMGENGALPAPVAAFGPDVI 372 >gi|146308541|ref|YP_001189006.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] gi|145576742|gb|ABP86274.1| permease YjgP/YjgQ family protein [Pseudomonas mendocina ymp] Length = 372 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 39/349 (11%), Positives = 110/349 (31%), Gaps = 17/349 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++++ + Q + ++ R+P + Sbjct: 2 IVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQ-GALDPGVLFLIMGYRIPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +L + ++++ + + + Sbjct: 61 QLILPLGLFLGFLLAYGRLYLDSEMTVLSATGVSQQRLTAYSMAPALIVALLVGWLSLGL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGA--------KKILPENHI 175 A G ++ + + + + + + + + + Sbjct: 121 APQGVASVARILNEQDALTELDTLVPGRFQSMKDGSRVTYSQELSADRSELRGVFMSEKR 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + S + ++ + + L+ Y D + + Sbjct: 181 FSSDGSSERGITVLLAESGRQEIQADGSRYLILENGYRYDGEPGEADYRVIQYDTYGVLL 240 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + + + R + + R + + + + IPL++ +TL+A +S Sbjct: 241 PKPEVAIEASEREAMPTRE-------LFGSDDPRVQAELQWRLSIPLLVFVVTLLAVPLS 293 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + IF ++ + G L P Sbjct: 294 KVNPRQGR-FLKLLPAIFLYMAYLGLLIAARGALDKGRLPPALGLWWVH 341 >gi|320451334|ref|YP_004203430.1| hypothetical protein TSC_c22790 [Thermus scotoductus SA-01] gi|320151503|gb|ADW22881.1| hypothetical membrane spanning protein [Thermus scotoductus SA-01] Length = 336 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 109/354 (30%), Gaps = 20/354 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY K L L +L + L DL + + + A L R+P + Sbjct: 2 LGRYVLKEVLVPYLVGVLLFVAL-LTFDLLSSLSGVLLSRGAGVEAIAKLILYRLPWTLS 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V L R SEL + A G+ W LL P + ++L+ F ++ + + Sbjct: 61 LALPLGLVFAILVGLARLIRQSELKAAYAAGVPPWALLKPLALLALLVSFFNLVNLAELR 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + + + + + + Sbjct: 121 PKALEAYDQHLARLLYGEGGLSGVLRKQLYAAEGLGVYYAEEVRPEVGQNRLYGIRVVDE 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + D + L+ + + + + + Sbjct: 181 RGRIYSGQEGVWDKEGWHFRGYVLEGGKPKPFA------GTLPFPTQFRPKESLGSRDPY 234 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S + E+ ++ + Y + L + L+AA++ L F + Sbjct: 235 DSTTLRELWERSQVEPSA--------RFALYRRLADALGGFFLGLVAAALGLSFREAAWA 286 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + F Y + T+ + + P+ A +P +L + + + Sbjct: 287 FLSI---VLLIFGYYVLWTLSAQLAR-YDVNPLLA-FLPNAFFAALGLYLTWRL 335 >gi|330994316|ref|ZP_08318244.1| putative permease [Gluconacetobacter sp. SXCC-1] gi|329758783|gb|EGG75299.1| putative permease [Gluconacetobacter sp. SXCC-1] Length = 410 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 40/364 (10%), Positives = 105/364 (28%), Gaps = 9/364 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P + RY + + L M + + L + N + + S+ L + +P Sbjct: 16 PTTMDRYLLRQVVPPFSIALGVVMAALLLERLLVLFNLLAANGS-SMKTFFALLSDLIPH 74 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P V V ++ E+ A G+SI+++ PFV+ + G + Sbjct: 75 YLGLALPAAMCVSVFSVIRRMSANHEIDALMASGVSIFRICQPFVLTGAIFGFLAFSLYG 134 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW-------MQISNPQQDIFIGAKKILPENH 174 I G + + N + + Sbjct: 135 FIQPYARYDYRSAFYFASHAGWTPHLQSKMFALSDDIVLTAENVDHAGSRMWNVFIRDGT 194 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 I+ K +++ + D + + + + ++ K+ Sbjct: 195 DKAHVRFISAQKGYLFNPADGSNIRLDLVDGTVITDSQDKPPTITSFSRTTRMISTKGKL 254 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 D R + + + F + + + ++A ++ Sbjct: 255 DTEAYRKRGETERELTVPELYYGIRYGNPTISHSYMIAELNFRLARTAAIPFIPILACAL 314 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + R + I + + SF + + P+ +P ++ + + + Sbjct: 315 AGVRKRQKNNPGLAIAAITL-VGFDHTLQMGMSFVANMHMSPLLVIWLPTLVFSLICVGV 373 Query: 355 LLQK 358 L+++ Sbjct: 374 LIRQ 377 >gi|259907066|ref|YP_002647422.1| Putative permease [Erwinia pyrifoliae Ep1/96] gi|224962688|emb|CAX54143.1| Putative permease [Erwinia pyrifoliae Ep1/96] gi|283476866|emb|CAY72714.1| Inner membrane protein yjgP [Erwinia pyrifoliae DSM 12163] Length = 366 Score = 87.4 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 114/339 (33%), Gaps = 7/339 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLTLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ + + + + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAAVNVGWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++Q K N + Q + Q +FI K ++++ Sbjct: 121 GPWSSRYQNEVMQNAKANPGAAALAAGQFQQSGDGQSVLFIENVKGNTFSNVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + + ++ + ++ + Sbjct: 181 GNARPSVVVAQQGHMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + ++ ++ + + ++ M L+ +S+ R + Sbjct: 236 HQAVTLDPNDSEQMSLDTLWHSDKPDFRSELHWRLTLVFSVLIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + + + + + + M+S G G + P A Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSMRSSGSKGRIDPAIAMWA 333 >gi|328544011|ref|YP_004304120.1| permease YjgP/YjgQ [polymorphum gilvum SL003B-26A1] gi|326413755|gb|ADZ70818.1| Permease YjgP/YjgQ [Polymorphum gilvum SL003B-26A1] Length = 395 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 117/363 (32%), Gaps = 14/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + + L +V+ + + +I + + +P Sbjct: 1 MKTLERYIVRRAGIAFVMTLAAMTGVVWATQALRQLDLVTSK-GQTIVQFVGITMLAMPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ + PF ++ I+V L+ SEL++ A G S + +L P V+ S + + + + Sbjct: 60 LVLVVAPFALMIALILVLNALSSDSELIVINASGGSRFLVLRPVVLFSAAIMLLSATLSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A G D I + + + ++ + + + + + Sbjct: 120 YVAPLGLAQLRDEIARVRVDLVANIVRPGRFITVEDGLTFHIRNRRGDGSLDGLLLHDRR 179 Query: 182 ITIDKKNK------IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I+ D L ++ + ++ + + + + L + + Sbjct: 180 DPQTVFTYQADVGRIVEAADRTLLLMQDGTIQRRPKTDGDISIVRFQSYAFDL-SALIPE 238 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + ++ RAE + + PL +A LI + Sbjct: 239 TSTPIYKASERPTLALLLGTHQDDYARQNADRLRAEL--HDRLSQPLYPLAFGLIVFAFL 296 Query: 296 --LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +R + + + + + L T + + SG + ++ I +++ Sbjct: 297 GQARTTRQGR-GMAMLGALVACIGLRTAGFGVSTL-ISGQASLTLGYYLVPLIGIGVALW 354 Query: 354 ILL 356 +L Sbjct: 355 TIL 357 >gi|325278208|ref|ZP_08143701.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] gi|324096648|gb|EGB95001.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] Length = 241 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 8/222 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY + L L L + L + + + + Y++ + P Sbjct: 1 MAK-LDRYIGQSVLLAILAVLGIILGLASLFAFIDEMGDLSDT--YTVMQAGYYVLLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +++P L+ ++ +L +SEL I RA G+SI +++ + ++L + +L+ Sbjct: 58 RRLYEMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGLLIG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + G+ Q S W + I + N + T Sbjct: 118 EYVAPVTENKAQADRSLAQGGGEAQSSKRGMWHRQGEEFVHI-----NAVQPNGLLLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID 222 D + KI A A +D L V + + Sbjct: 173 RYRFDSERKIQTSSFARRAQYTDDHWLLSDVSTTFFRGDHTE 214 >gi|329114704|ref|ZP_08243462.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] gi|326695970|gb|EGE47653.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] Length = 358 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 126/361 (34%), Gaps = 7/361 (1%) Query: 1 MPG-ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 MP +L RY L ++ + L+ ++ L E + + + + AA R Sbjct: 1 MPRHVLLRYLSMALLTRVIFCGAVLVGLLEILALLEQTTPILQR-HLGVQGILSFAAMRA 59 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P ++ +P L+ +++ + SE+ I RA G+S + L + ++++G V++ Sbjct: 60 PFLLAGALPLSVLIGALLMLTQMTLASEIAILRACGLSTFGLYKYLIPATLVIGFAGVVL 119 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + + L W ++ W N I + + Sbjct: 120 DDQVTP---RSEQALAAWWNRTDPHPENGHAFWFHDGNRIAHIGYTSDGGNMLAKVDIYI 176 Query: 180 TSITIDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + D + VE + + + + + F Sbjct: 177 RDTNGRLQQILHAKSADYTHTRGWLLHNVDSITVEGEKTTRLPSVQNMSWDTSLHPWEFI 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S + S I+ + + E + P L+ + LIA Sbjct: 237 RLSAENPPLSSTTILGMLQ-GRLPSHTSPGFLEAGLLERFLRPASLLVLLLIALPTIYIP 295 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + + + G + + ++++ G +G+L P A + +I+ +I +LL+ Sbjct: 296 PRTGTRSWVPVWCLGCGLLFIIVQGMLRAMGNAGLLPPAIATIPALIIFTLGAITVLLRN 355 Query: 359 E 359 E Sbjct: 356 E 356 >gi|153820564|ref|ZP_01973231.1| conserved permease [Vibrio cholerae NCTC 8457] gi|126508893|gb|EAZ71487.1| conserved permease [Vibrio cholerae NCTC 8457] Length = 236 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 84/238 (35%), Gaps = 6/238 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A +K+ D+ G W + +N I + L ++ Sbjct: 120 EWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEHLYGLNL----- 174 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + K + + N++ +K V + + L+ + Q Sbjct: 175 WRFDENKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVMTSRSVKNRCLSTAGEPPLLQ 232 >gi|260363481|ref|ZP_05776317.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] gi|308112551|gb|EFO50091.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030] Length = 348 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 30/332 (9%), Positives = 95/332 (28%), Gaps = 7/332 (2%) Query: 21 LLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFF 80 ++ + + + + +P + ++P + ++ F Sbjct: 1 FFVLFLVFVSQKFISVLADASD-GDIPAGLIFSIVGLNMPAMGLLMLPLSLYIGILITFG 59 Query: 81 NLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKD 140 L SE+V+ A GI L+ + +++ ++ + L +Q Sbjct: 60 RLYAESEIVVMNATGIGNKFLVQAALYLALITSGVAAFNALWLSPWSQDRVEHLYEQVAA 119 Query: 141 NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAI 200 + + +FI K ++++ ++ ++ Sbjct: 120 ENSVDLLKKGQFQGTPDGSSVVFIDDIKDSTLSNVFVAQMRPRDSVLPSVMFSSSGEVKE 179 Query: 201 IYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN 260 + + + + +Y +P + + R + Sbjct: 180 LSDGRQVITMQEGTRYEGVPTRVEYMITKFDEYEGVIGQREVKQKGRDWEAYPT-----A 234 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 + A+ + + I + + + +T++ +S R + + I + Sbjct: 235 DLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGRFAK-MGPAILIYLAYFL 293 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSI 352 I+ KS + G + + + ++I Sbjct: 294 AISATKSALEDGAIPAAIGMWPINAMLLIVAI 325 >gi|224418390|ref|ZP_03656396.1| permease [Helicobacter canadensis MIT 98-5491] gi|253827708|ref|ZP_04870593.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313141921|ref|ZP_07804114.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511114|gb|EES89773.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130952|gb|EFR48569.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 355 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 115/355 (32%), Gaps = 5/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + RY YLK + +IDL + +++ + N +L Sbjct: 3 LFSRYIISLYLKYFFILFVSLECFFVLIDLVKYLDELPQSANL----IVLLIFYDFVYAS 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P ++ IV+ ++ R S+ A+G S ++ P + S L+ + VL+ Sbjct: 59 NFILPLSLVLAQIVLSISMLRNSQFTAFLALGYSKARIFLPIFIVSFLITLLFVLLNATP 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ +I++ K I ++ + + + + I Sbjct: 119 FAYAKERVDLIIERGYLGSYKNDLFIKYNENYIYFEKIFPLLKMAENVKVYEVFNKQVIK 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 I + K +D + + ++ + K E+ Sbjct: 179 IIEAPKATFIEDKWKLEDARITTLDSNLEVGKNPLKIEEQKTYETLEGFKPKILDNIYEK 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S S + ++ + K + + + + + M +A + +R Sbjct: 239 QGSVSIVDALEAIWLLKKQGVNTQKLRSSLYALIFFPFFAPLVMVCLA-RFTPNSNRYAN 297 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 I I +++ + SG L P + ++P+ + +S+ + L+ Sbjct: 298 IGGITLGMILGVLIVWGVFFSFSRLSMSGFLPPEVSIILPIGILGLVSLWLFLRL 352 >gi|189220202|ref|YP_001940842.1| permease [Methylacidiphilum infernorum V4] gi|189187060|gb|ACD84245.1| Predicted permease [Methylacidiphilum infernorum V4] Length = 405 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/369 (12%), Positives = 123/369 (33%), Gaps = 14/369 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++++ F K +L + + + + + + L + +P Sbjct: 34 MRTIYKFLFLELFKNSLITTSILTFFLVIANAFRDLSDLLVNNEVPLWISVKLLVSLIPF 93 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P+ LV I++F +++ EL ++ GIS+ ++ P + ++L + + + Sbjct: 94 VLTFTLPWGLLVAVILLFGKMSQDRELTALKSAGISLGAIMAPVIWFALLYSVLSFAINA 153 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT- 180 I ++ + + + + E+ + Sbjct: 154 YIGPKSRHAFKEIFSDVMLHNPLSFFKSNKTIDQFDGFRLYATNRIGARLEDVYIWETDA 213 Query: 181 -------SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-KNSTTLNIPI 232 + + + L ++N + + + V + Q ++ + +T L I Sbjct: 214 DLRPLRSIRASEAEIEPDLAHQRILLTLWNARQEERNVSDPQNVKLVMPGSRATQLPYEI 273 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF----HNYRAETQFYFLIVIPLMLVAMT 288 + S + + +++F + T+F + L Sbjct: 274 SLAQLFDRLTVRKSIGLSTLDEIGRSIVAADLFGFTSNPTPVLTEFQKRLAFSLSCFTFV 333 Query: 289 LIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 L+ A ++++ R I VA + Y I+ + ++ L P +P I+ Sbjct: 334 LVGAPLAIQVQRKE-TSIGVALSLLIVLSYYVIVLLAEALKAKTNLFPELIIWLPNIIFQ 392 Query: 349 SLSILILLQ 357 SL ++ + Sbjct: 393 SLGFWLIWR 401 >gi|225164329|ref|ZP_03726596.1| permease YjgP/YjgQ family protein [Opitutaceae bacterium TAV2] gi|224801063|gb|EEG19392.1| permease YjgP/YjgQ family protein [Opitutaceae bacterium TAV2] Length = 379 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 43/376 (11%), Positives = 107/376 (28%), Gaps = 20/376 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL R+ F L T +L ++ V + + Q ++ A L VP Sbjct: 1 MKILQRHIFLSVLTTCFAAVLLFTFVLIVGNALKDLLQFALAGQITMPDMAKLLLLLVPY 60 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L ++V ++ SE+ RA G+ I + P ++ ++ + ++V Sbjct: 61 VVAFALPIGVLTGVLLVLGRMSGNSEITAMRAAGLGIAFVTRPILLLAVAGSVICLIVNY 120 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN-----------------PQQDIFI 164 K +++ + + +++ ++ Sbjct: 121 YYMPMTRKPYKNMVPNIVRSDPLKLITARTFLREFPNAVVYVDEKDGTVLRDLWVWELDR 180 Query: 165 GAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + + + + K + R+ +D KVV + Sbjct: 181 DKRVVRAHHAQEGELAYNEESHKLVLKVREGTTELRDRDDPEAFNKVVTVSTFGSAEFEF 240 Query: 225 STT--LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPL 282 S + + + ++ + + L Sbjct: 241 SLSNLFGRITTRQKLDWMTLEELKAQREQLTAAPDADTPEGQMRRMQVDVTLNKKAANAL 300 Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 ++A LI + ++ SR + + + Y + + P + Sbjct: 301 AVLAFALIGVPLGIKVSRRETSA-NLGMALLLILIYYMLSGVAGWLEAYPRWRPDLIVWV 359 Query: 343 PVILTISLSILILLQK 358 P +L +L + Sbjct: 360 PPLLFAGFGAWLLSRL 375 >gi|288937433|ref|YP_003441492.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] gi|288892142|gb|ADC60460.1| permease YjgP/YjgQ family protein [Klebsiella variicola At-22] Length = 365 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGIPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ G + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q S+ +FI + + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ +L+ + + ++ + ++ + + Sbjct: 181 GNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVT 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ H RA + ++ + + M L+ +S+ R + Sbjct: 241 SDPDDTEQM-----DMRTLWQTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G + P +L +L++L+ Sbjct: 296 V-LSMLPAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVLL 345 >gi|302338546|ref|YP_003803752.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] gi|301635731|gb|ADK81158.1| permease YjgP/YjgQ family protein [Spirochaeta smaragdinae DSM 11293] Length = 360 Score = 87.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 117/357 (32%), Gaps = 5/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L + + L+ +V +++L + + + +++ + P Sbjct: 1 MKKLDLMVLRAFFHILFLSLMFFSFVVVLVELFSNLWRYLQ-NDAALAEILFTSLLYYPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +P L + +EL+ + G+S+ + P +V S LL + + Sbjct: 60 AITLALPPSILFAIAFTLGSYQANNELLALFSSGVSLLRFTVPIIVLSALLSVGSYFFQE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ---ISNPQQDIFIGAKKILPENHIWED 178 + L + ++ + + + D + + L + Sbjct: 120 YLVIPKSAQKQILTDRLSGRSSVGNNNNVVILSGEGRFLYKIDYYNAKNRSLTGVSVLIR 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + K+ + + + +V+L +V+ + + F+ Sbjct: 180 DSQGNFTKRIESEWAQCDESGEWVFHRVRLFEVLSDKRVTEQFFLTYRNPELSESPSSFR 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 K E + KS ++ T +Y L + + L++ S+S + Sbjct: 240 KQIGSVNELQRKEAQVWIERLRKSGSERYHKELTAYYERFSFSLTPLIVALLSISLS-GY 298 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + N + + + + Y ++ F + GI+ P+ A +L + +S+ +L Sbjct: 299 FKKNILLMSLLSSVIVSVLYYVSEMVLVLFAQLGIIRPITGAWTSALLFLCISLFLL 355 >gi|237807325|ref|YP_002891765.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] gi|237499586|gb|ACQ92179.1| permease YjgP/YjgQ family protein [Tolumonas auensis DSM 9187] Length = 367 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 119/347 (34%), Gaps = 6/347 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY FK LKT L LL +++ I + + + S + +P + Sbjct: 2 IVFRYIFKETLKTQLSILLILLLIFTSQQFIRILARAAD-GSIPSSLIGQMMLLNIPYMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + + L SE+ + RAIG+ ++ +V ++L + + + Sbjct: 61 LLLLPISLFIAILFAHGRLYADSEMTVLRAIGVGPSYIMRISLVLALLTTVVATVNTMWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L+ K + + ++ + + + + + + Sbjct: 121 APMAREKQSQLLDAAKADPLSIPLESGRFLSL--DGGHLTAYVEDVQDSGRSLQRIFLLQ 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 A + ND V R ST +I + + + Sbjct: 179 RSPDPAEAAIIVAASGHLTNDAQGTPWVTLANGKRYAGTPPSTQFSIANFAEYKAQLQRK 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + S + ++ AE + +V+PL + MTLIA +++ R + Sbjct: 239 DIEPSTPKARALPSSALYNSTDKKQIAEW--QWRVVLPLSIPLMTLIAVPLAVVNPRQGR 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + + +++ +S + G L + I +L L Sbjct: 297 YAK-LLPAVMLYLSYFLLLSAGQSAIERGQLPEMPGLYIIPVLFTLL 342 >gi|258542690|ref|YP_003188123.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256633768|dbj|BAH99743.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01] gi|256636827|dbj|BAI02796.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-03] gi|256639880|dbj|BAI05842.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-07] gi|256642936|dbj|BAI08891.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-22] gi|256645991|dbj|BAI11939.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-26] gi|256649044|dbj|BAI14985.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-32] gi|256652031|dbj|BAI17965.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655088|dbj|BAI21015.1| transporter YjgP/YjgQ [Acetobacter pasteurianus IFO 3283-12] Length = 364 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 126/361 (34%), Gaps = 7/361 (1%) Query: 1 MPG-ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 MP +L RY L ++ + L+ ++ L E + + + I AA R Sbjct: 7 MPRHVLLRYLSMALLTRVIFCGAVLVGLLEILALLEQTTPILQR-HLGIQGILSFAAMRA 65 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P ++ +P L+ +++ + SE+ I RA G+S + L + ++++G V++ Sbjct: 66 PFLLAGALPLSVLIGALLMLTQMTLASEIAILRACGLSTFGLYKYLIPATLVIGFAGVVL 125 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + + L W ++ W N I + + Sbjct: 126 DDQVTP---RSEQALAAWWNRTDPHPENGHAFWFHDGNRIAHIGYTSDGGNMLTKVDIYI 182 Query: 180 TSITIDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + + D + VE + + + F Sbjct: 183 RDASGRLQQILHAKSADYTHTRGWLLHNVDSITVEGEKTTRLPSVQDMGWDTSLHPWEFI 242 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S + S I+ + + E + P L+ + LIA Sbjct: 243 RLSAENPPLSSTTILGMLR-GRLPSHTSPGFLEAGLLERFLRPASLLVLLLIALPTIYIP 301 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R+ + + + SG + + ++++ G +G+L P A + +I+ +I +LL+ Sbjct: 302 PRTGTRSWVPVWCLGSGLLFIIVQGMLRAMGNAGLLPPAIATIPALIIFTLGAITVLLRN 361 Query: 359 E 359 E Sbjct: 362 E 362 >gi|154253775|ref|YP_001414599.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] gi|154157725|gb|ABS64942.1| permease YjgP/YjgQ family protein [Parvibaculum lavamentivorans DS-1] Length = 388 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 103/361 (28%), Gaps = 9/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY F L + + ++++ + + + ++ L +P Sbjct: 1 MLKSLSRYLFFQTLGPFVVASVVLSGIIWLTQALRMLDVLI-TQGQTLLTFFELTVLALP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P + L SE+V+ A G+S W + P + ++ + + Sbjct: 60 STLMIVLPISLFCAVLYSLHKLISDSEIVVMFAAGVSRWVVALPLLAIAMGTSVIILAFS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA +G + + + + + + + + Sbjct: 120 IYIAPAGMRELKSRLVEIRSDVATAMIREGTFSNPATGLTVFVRERAADGTTYGVLVHDG 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 I + V ++ +T L ++ Sbjct: 180 RIPSAPVTYMAETGSLVRGPNGPLLVMFNGNIQRASRSGTETSAATFLYFDKYTYDLSQY 239 Query: 241 SEQFASRSFYEIIKKMSFS------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 E + S+ + + + + + +V V +TLI + Sbjct: 240 MEDEPTLSYEGRERYFHELVNPASDDLYGQQNRDKLLADAHERLVEGFYPVMLTLIGLAA 299 Query: 295 SLE--FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 L F+R + + + + + G + L P+ L + I L++ Sbjct: 300 LLPAPFNRRGYASRMATAAAMALTVRILGFALSNAVGNNLALAPLMYILPIAVCGICLAV 359 Query: 353 L 353 + Sbjct: 360 I 360 >gi|37528301|ref|NP_931646.1| hypothetical protein plu4480 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787739|emb|CAE16852.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 366 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L EI N + L VP + Sbjct: 2 IIIRYLVRETLKSQVAILFILLLIFFCQRLVEILG-AAVEGNVPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ L+ ++ ++L + + + Sbjct: 61 QLILPLSLFLGVLMTFSKLYTESEITVMHACGLGKRVLVVSALILALLTSALAAVNVIWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K ++ K N + + ++IG +++ Sbjct: 121 MPWSSKYQEQVVADAKANPSLAAIMEGRFKPSEDGNLVLYIGNVHGNKFENVFLAQLRPV 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + K + +Y + ++ + Sbjct: 181 DNQRPSVVISNGGHMVERPDGKQVVVLNHGTRYEGTAMLRDFRITEFRDYQAIIGHQTSI 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + ++ + +F++ + + L ++ M ++ +S+ R + Sbjct: 241 VDNNKVEQ-----KSIIQLWQDNDKDSRAEFHWRLTLVLSVLIMAMMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G G L P+ + + L++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNGSKGKLDPMIWMWLTNGTYLMLALVL 345 >gi|325971215|ref|YP_004247406.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] gi|324026453|gb|ADY13212.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] Length = 361 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 112/360 (31%), Gaps = 13/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + L+ +++ +DL + S A L P Sbjct: 1 MKVIDRYIIRSIASVAFVTLMLCTLMLLSVDLFANLDSYLTRK-VSYLMIAKLTLLYTPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + L L +EL+ G+S +++ P ++ + L F Sbjct: 60 AVLFALGPALLFSASFFLSQLQANNELICLMGSGLSYRRIVIPILMFGLALSTFQFGFSE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K + I + +P+ + A++ Sbjct: 120 YVHIPLSKEREVQEDSLFGLRSTYDNRNI---TLRDPEGAYVVHARQYSDREKRLAQVML 176 Query: 182 ITIDKKNKIIHRKD--ADLAIIYNDKVKLKKVVEYQYG------RIPIDKNSTTLNIPIK 233 + ID+K + R D +L++ Q ++ + ++ Sbjct: 177 VLIDEKGSLKSRIDAPWAYWEEEKGIWRLEQARNQQVDSSLLVLHQTEEQVLYVDSFTLQ 236 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 F+ S + + + + + T F ++ L + M IA + Sbjct: 237 PSFFRNVSNDIKTMELRTAYHYLQRIAELDPNRYPQLATDFAKRLLDSLNPLVMLFIACA 296 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 +S ++ ++ + + + Y + + K ++ P+ IP+I+ + +++ Sbjct: 297 ISYKYKKNV-LLFSIITSLGIAVIYYVVQMVTLIMAKQAVIGPLWGMAIPMIVIVCIALA 355 >gi|251792100|ref|YP_003006820.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Aggregatibacter aphrophilus NJ8700] gi|247533487|gb|ACS96733.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter aphrophilus NJ8700] Length = 367 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 119/356 (33%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + L +P + Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFCQQLVRVLGSAAN-GQVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ L SE+ + RA GI L+ ++ S+ + Sbjct: 61 QLMLPLCLFIAILLTLGRLYAESEITVMRACGIGQRILVKIVLILSLFTAAVAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++++ K N + +M +N +FI + N+++ T Sbjct: 121 TPWAIHKQTEIVEEAKANPNMGALSAGQFMTANNSDFVLFIDNIQDNQINNVYVFQTQPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLK-----KVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 K +I + +L + N L + + + Sbjct: 181 GQSKPSVIVAEKGELKALPNGDQILNLQNSDRFEGTAILPDFRITHFDEYQAYLGHKTVA 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 +++ ++ + +T+F++ + + L + M L+A +S Sbjct: 241 DDADEAGEMDIMQLWN----------ANAPAMKTEFHWRLTLILAVPIMALLAVPLSRVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + V + + + + + +KS G +G L + I +L+I + Sbjct: 291 PRQGRFAK-VLPALLLYLIYFLLQSSLKSAGGAGKLDASLFMPLVNIAFFALAIFL 345 >gi|220935307|ref|YP_002514206.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996617|gb|ACL73219.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. HL-EbGR7] Length = 367 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 101/348 (29%), Gaps = 16/348 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P IL RY + L T L ++++ + + + E + A Sbjct: 3 PSILTRYLVREVLLTQAAVTLVLLLIIVGGTVARMLREAAE-GRIPADVLLPMVALGSVR 61 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P + ++ L + SE+ +A G+ QL ++ L + +++ Sbjct: 62 GLILLLPVSLFLALMLSLGRLYKDSEMAAMKACGVGPEQLYRAIAWMTVPLLVMLTVLVF 121 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + D + + Q FI S Sbjct: 122 WGSPLASQGIDQIRIDAEQRSDLVGIAPGRFTESRATGQVFFIEGLAGDGNTMRGVFIRS 181 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK-- 239 + + R+ + L Y+Y P + L Sbjct: 182 RGPEGDEVVTARRGETRVDPLTGQRYLVLHDGYRYRGAPGSQEFHILAFETHGLRVPDPT 241 Query: 240 ---FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S S E+ + + S + ++ I +P+ +V + +A +S Sbjct: 242 GSTRRGKVDSLSTAELWQSTNLS----------HRAELHWRIAMPVSMVLLAALALPLSH 291 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + + + I + + + KS+ SG Sbjct: 292 TSNPRSGRFGKLTAAIGVYILYANFLILSKSWFASGQTPAWLGMWWVH 339 >gi|114326913|ref|YP_744070.1| permease [Granulibacter bethesdensis CGDNIH1] gi|114315087|gb|ABI61147.1| permease [Granulibacter bethesdensis CGDNIH1] Length = 404 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 103/347 (29%), Gaps = 11/347 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I+ Y + ++ + L L + + + +V + Sbjct: 38 PLIIQTYLIREIMRPFVPVLAVLAGLFGSFSAAGFLSDAVN-GLLPTGSIIQMVSLKVLI 96 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +IP + ++ F LN E+ A+ + ++ + + + + + Sbjct: 97 ALEVLIPISLYLSVLLAFGRLNSDQEITAMAALRVQPERIWRIVLSLCLAMAVVVGALSL 156 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L Q + + + + + IF ++ E Sbjct: 157 FARPWAYARLHALSDQAHVSLNTDAMEAGTFYIGPKGNRVIFFTHRQGPEEPASGVFVQL 216 Query: 182 ITIDKKNKIIHRKDADLAIIYND---KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + D+ I R+ L D ++ L Y++ R + +D Sbjct: 217 WSPDRMEIISARQAMTLRPASPDAKSQILLSDAHIYRFNRSGEGNDEVLDAAETVLDIQP 276 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ A + + + + + + P+ + + L+ +S Sbjct: 277 NKADAAAYSAVATASRLL------LGSPSPADIAELQWRFSTPVSTLLLGLLGIPMSRSK 330 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 R ++ I + F Y + T +++ + G++ + Sbjct: 331 PRQSRYA-RFGAAILAYFSYYLLCTSARTWVQHGVVPAIPGIWWVPA 376 >gi|239809484|gb|ACS26210.1| unknown [uncultured bacterium] Length = 359 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 107/347 (30%), Gaps = 17/347 (4%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 ++++ + Q + ++ R+P +Q I+P + ++ Sbjct: 3 AVSAVLLVIIMSGRFIKYLAQAAQ-GLLDPGVLLLIMGFRLPGFLQLILPLGLFLGILLA 61 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 + L SE+ + A G+S +LL + + L+ + + +A G ++ Q Sbjct: 62 YGRLYLESEMTVLSATGMSQRRLLVYSLAPAALVAVVVGWLSLGLAPQGIAEVDRILNQQ 121 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKK--------ILPENHIWEDFTSITIDKKNKI 190 + + + + + + T + Sbjct: 122 DSLTEFDTLVPGRFQTLRGGSRVTYTRELSADRSELGGVFISETNVSRQTGKESGLSVLV 181 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 ++ + + L+ Y D + + + + S + + R Sbjct: 182 AESGRQEVQPDGSRYLILENGYRYDGNPGQADYRAIQYDTYGVLLPKPEVSMELSEREAL 241 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 + + N R T+ + +PL++ +T++A ++ R + + + Sbjct: 242 PTRELL-------GSDNIRHRTELQWRFSLPLLVFVVTVLAVPLAKVNPRQGR-FLKLLP 293 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I ++ ++ G + L +++ +L+L Sbjct: 294 AILLYMTYLALLIAVRGALDKGRIPMALGLWWVHGLFLAIGLLMLYW 340 >gi|115379870|ref|ZP_01466933.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] gi|115363129|gb|EAU62301.1| permease YjgP/YjgQ, putative [Stigmatella aurantiaca DW4/3-1] Length = 342 Score = 86.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 101/322 (31%), Gaps = 12/322 (3%) Query: 46 YSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPF 105 +++ L P + + +P L+ ++ L+ EL +A+GIS QLL Sbjct: 15 VTLTDIGRLILYLTPHFLVKALPIAFLMAILLGLGRLSEDRELTALQALGISPVQLLLGP 74 Query: 106 VVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 + +LL L+ G +L+ + + + + Sbjct: 75 MAIGLLLAGLMALLAFTAQPWGLTSVKELVNEVIKKNVAGDVKSGVFYEDLSDLTLYAER 134 Query: 166 AKKIL-PENHIWEDFTSITIDKKNKIIHRKDADLAIIYN------DKVKLKKVVEYQYGR 218 + H+ + R + ++ ++ + Sbjct: 135 VSREGGEWTHVLLHDDREPSSPLLVLAQRGRVSMREGDEALRLVLEEGEVHRATRSTADY 194 Query: 219 IPIDKNSTTLNIP---IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY 275 + +++ +F Q S E+I+ + KS + + Sbjct: 195 SLLRFEQGEISVGLGGSMNRKSNRFRSQKEEMSPGELIQAAEEAEKSGG-NPRPFLMAIH 253 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + + ++ L+ +++ ++ + + + Y + + ++ G L Sbjct: 254 MRLGNAVAPLSFALLGTPLAIGRKQAGR-AWGYLLTLSGYVLFYVLSRVFETLGNQEKLP 312 Query: 336 PVAAALIPVILTISLSILILLQ 357 V AA +P IL L ++ + + Sbjct: 313 MVLAAQLPNILFSVLGVVAMWR 334 >gi|269121332|ref|YP_003309509.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] gi|268615210|gb|ACZ09578.1| permease YjgP/YjgQ family protein [Sebaldella termitidis ATCC 33386] Length = 360 Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 136/364 (37%), Gaps = 10/364 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY Y+K + +L +++ + + + + E +++ V +P Sbjct: 1 MNK-LDRYILINYIKGFILGMLMFLLIFLLAESINVTGWIME-DKFTLKDSMVYIKYGLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ +++ + + E+ + GIS + + ++ S L+ +FTV + Sbjct: 59 EILVNTAPLGILLGSLLSISKMAQRLEITAVKTAGISFRRFVLFPILFSALVSVFTVYIS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I K+ ++ + D+ K + + I ++ + A + ++ E Sbjct: 119 INILPEANKMKREMKDRKLKEDDQTKKNEKKDVYI-KLDKNRMLYASYVNKNKNLMEGIM 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDG 236 + + I + YN + K+ + + + + L+ + + Sbjct: 178 IVDFHENLNGIKSIYVSPSATYNSQSKIWDFGSLKELDVEKNMENEILSSEFQLRATPNE 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + E+ +K + ++ + ++ Y + M+ I S+ Sbjct: 238 ILEDQVKAKELTLKELREKSVYYSRVGA-NTNDLFSELYNRLSFTFASFIMSFIGLSLGS 296 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG-KSGILLPVAAALIPVILTISLSILIL 355 ++ R I + + G+ Y I T+++S G + A + I+ +L + + Sbjct: 297 KYVR-GGAAINIGLSVLIGYSYYGISTMLRSMGPVVSVFPLYITAWLTNIVFFALGVYLF 355 Query: 356 LQKE 359 + E Sbjct: 356 RKAE 359 >gi|52425604|ref|YP_088741.1| hypothetical protein MS1549 [Mannheimia succiniciproducens MBEL55E] gi|52307656|gb|AAU38156.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 366 Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + N L +P + Sbjct: 2 ILTRYLTKEVFKSQVAILFILLLIFFSQQLVRVLGSAAN-GNVPADLVLSLLGLGMPAMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ + S+L + + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEISVMRACGVGQRILVKVALGLSVLTAALAAYNVLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + N + +M ++ +FI K ++I+ T Sbjct: 121 SPWAIQKQGQIVEDARANPNMSALSAGQFMTSNDSDFVLFIDNIKDNKISNIYLFQTKEK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K +I ++ +L + N L + + N Sbjct: 181 GNSKPSVIVAENGELQSLPNGDQILSLQNSQRVEGSAALPDFRITNFTEYQAYLG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + E + A+ + + I + L + M L+A +S R + Sbjct: 236 HRNVDSDENETTELPLAELLALKTPAAKAELNWRISLILAVPLMALLAVPLSKVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + +KS G +G L + + + L I++ Sbjct: 296 FAK-ILPALLLYLIYFLLQSSLKSAGGAGKLDAGLLMPLVNLFFLLLGIML 345 >gi|148556806|ref|YP_001264388.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] gi|148501996|gb|ABQ70250.1| permease YjgP/YjgQ family protein [Sphingomonas wittichii RW1] Length = 400 Score = 86.7 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 113/357 (31%), Gaps = 11/357 (3%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L L+ A +L+ + + + + + +S + A +P + Sbjct: 8 DRYVARLIATPLLATLVIAAMLLTLDKMLRLFDFVVSEGG-PVSVVWRMLANLIPEYMSL 66 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP ++ ++ F L +SEL + RA+G+S +LL ++ L + + ++ I Sbjct: 67 GIPIGLMLGCLLAFRKLALSSELDVFRAVGMSYGRLLRVPYYYAVALALLNLAIVGFIQP 126 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 L + + + + ++ +++ E T Sbjct: 127 YSRYAYEGLRFELRSGALGASIKVGEFTKLGKRMTIRVESSREGGRELSGIFVMTESKDG 186 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK--------MDGF 237 K + LA D + L+ P K L M+ F Sbjct: 187 KSLAVTAEHGQFLATDDPDTIILRLQKGVLVHDAPQFKEPRVLQFVGHDLPIDLPKMEAF 246 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 ++ + + E++ + + L+ + + + + A Sbjct: 247 RQRGGRDLEMTMPELVVTAHQATTPAKQRAQFRSEFHFRLVE--VATMFLLPMLALALAV 304 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + V I + I S G + P+ A +P + +L + Sbjct: 305 PPKRSSSALGVFLSIVMIVTQHKINEYAASVAALGRIDPLIALWVPFLAFAALVWWM 361 >gi|259419313|ref|ZP_05743230.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] gi|259345535|gb|EEW57389.1| permease YjgP/YjgQ [Silicibacter sp. TrichCH4B] Length = 379 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 117/359 (32%), Gaps = 15/359 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY YL +F L + + ++ + + + S+ ++A +P +++ Sbjct: 5 DRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIG-DGQSVLAFLEISALSLPNLVRM 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P + V LN SEL + RA G S WQL P + +L + + Sbjct: 64 VLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMAFGVLSAAMMSALSLFLLP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + + + + + ++ P I I P+ + F + D Sbjct: 124 ASLAQMQLREAELSRSVSAKLLNAGNFLH---PSAGITFFVGSIDPDGTLNNVFLTDQRD 180 Query: 186 KKNKIIHRKDADLAIIYNDKVKL-------KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 +I + D + +D L ++ + + + Sbjct: 181 PSVEITYTSDRAYLVREDDMAHLILVDGLAQRKEAHNDRLSTTAFADFSYPLGDLSPART 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSL 296 + + ++++ ++ + + + A+ +I S + Sbjct: 241 MGARPLRNIPTLDLLRDRDEITQNEGHSAGAQAEELHLRFARAAVTFAVVMIGVSTLLLG 300 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 FSR + ++ + + + + + + P+ +P + + +S++ L Sbjct: 301 GFSRFGIWKQVLVAFVLLILIEGMRGVVSEPVRDNAQMWPLI--YLPAAIGVLISMIFL 357 >gi|292486865|ref|YP_003529735.1| inner membrane protein YjgP [Erwinia amylovora CFBP1430] gi|292900738|ref|YP_003540107.1| permease [Erwinia amylovora ATCC 49946] gi|291200586|emb|CBJ47717.1| putative permease [Erwinia amylovora ATCC 49946] gi|291552282|emb|CBA19319.1| Inner membrane protein yjgP [Erwinia amylovora CFBP1430] Length = 366 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 114/339 (33%), Gaps = 7/339 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLTLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ + + L + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAALNVGWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++Q K N + Q ++ Q +FI K +++ Sbjct: 121 GPWSARYQNEVMQNAKANPGAAALAAGQFQQSADGQSVLFIENVKGNTFRNVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + + ++ + ++ + Sbjct: 181 GNARPSVVVAEQGRMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + ++ ++ + + ++ M L+ +S+ R + Sbjct: 236 HQAVTLDPNDSEQMSLDTLWHSDKPDFRSELHWRLTLVFSVLIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + + + + + + ++S G G + P A Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSLRSSGGKGRIDPAVAMWA 333 >gi|320088912|emb|CBY98670.1| Lipopolysaccharide export system permease protein lptG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 220 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 5/164 (3%) Query: 195 DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIK 254 + D+ L+ + + S T + D + + S + Sbjct: 61 HKVWRLSQVDESDLQNPKQITGSQTV----SGTWKTNLTPDKLGVVALDPDALSISGLHN 116 Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 + + S R + + I PL + M L+A S RS + V GI Sbjct: 117 YVKYLKSSGQ-DAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISF 175 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 GF+ Y + I + P+ AL+P +S+ ++L+K Sbjct: 176 GFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLWLMLRK 219 >gi|194290552|ref|YP_002006459.1| permease, yjgp/yjgq family [Cupriavidus taiwanensis LMG 19424] gi|193224387|emb|CAQ70398.1| putative permease, YjgP/YjgQ family [Cupriavidus taiwanensis LMG 19424] Length = 376 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 111/355 (31%), Gaps = 10/355 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL + + T L + + + I S + +L + Sbjct: 2 ILQQALRRELAYTAGAVFLVMLTFMLTSLVIRILGMAAN-GKASPNDVLMLIGLATIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + ++V + SE+V+ + GIS+ L+ P + + + +L+ Sbjct: 61 SILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRDLVKPVLQFAAPFIVLALLLGLFA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSI 182 + +++ G +++ + +FI G + + Sbjct: 121 WPWANQQSALFRDRFEQRGVMSMIAAGRFIEPAKANYVLFIEGIDADMKHARNVFVANAE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + H+ + + V ++ Y ID + + + Sbjct: 181 ADKIGVALAHQGQFETMPNGDRLVVMENGRRYSGTPGQIDYRIVEF------ERYAVKVD 234 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S + K + + + I +P++ +IA ++ R Sbjct: 235 NKPPESEASLPPKSRDTIDLIRNPTRENLGELVWRISLPILAFNFVMIAIPLAYVNPRLG 294 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +V + +I + +S+ ++G + A P+ L + L L+L + Sbjct: 295 RYTPLVF-AVLIYLTYSNLINLSQSWVRNGSIPFWLA-WWPIHLAVFLGALLLFR 347 >gi|58040479|ref|YP_192443.1| hypothetical protein GOX2051 [Gluconobacter oxydans 621H] gi|58002893|gb|AAW61787.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 380 Score = 86.3 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 116/367 (31%), Gaps = 13/367 (3%) Query: 1 MPG-ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 MP +L + + L L + L+ ++ L E + + A + Sbjct: 19 MPRHVLIKALNRALLGRFLLCGAVLVSLLEILALLEKTTPILNR-HLGFRGILTFAFLHL 77 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P + I+P +V + + + +SE+ RA G+S L + ++ GI Sbjct: 78 PALSIDILPLAFMVGALFLLTQMTLSSEISALRAAGLSTPALYRLLLPAVLIAGIGGTCA 137 Query: 120 INPIATSGEKI--GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 + + E D Q D I W + + +I Sbjct: 138 QYWLVPACENALTTWWNRTDPLAGQDGQPEDNILWFRAGP----TLVRIGQIAQGGTFLR 193 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN----STTLNIPIK 233 D T D + + ++ + + + N +T IP Sbjct: 194 DVTIYHRDNTGLLTGTEHTNVLTYRDGQWHPDGAQDLSLSDDKSYVNVTKGDSTFVIPAT 253 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 S+ A+ + + + + + +++P+ + M L+ Sbjct: 254 PSVIMTLSQNGATVTPAQ-VSAILHKGAPASLPRATYRMALFSGMILPVEIAVMLLLTLP 312 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 V R+ + Y + +G + ++ + G +G L A + +L L + Sbjct: 313 VIYIPPRAGLRNPLPVYVLAAGMGFVILQGMISALGNAGTLPAPLAVSVGPLLGTLLGLT 372 Query: 354 ILLQKED 360 LL+ E+ Sbjct: 373 WLLRMEE 379 >gi|157827727|ref|YP_001496791.1| putative permeases [Rickettsia bellii OSU 85-389] gi|157803031|gb|ABV79754.1| Putative permeases [Rickettsia bellii OSU 85-389] Length = 362 Score = 86.3 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 141/357 (39%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + +L ++ + + +VP + Sbjct: 5 KTLSWYLAKLYFKCFFIILFILIGLLIISNLFDLLQKFKNMY-VPFDFFWRFILYKVPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LNQVSALISFTSMLFFLRNLTKNNELTAILSSGIHIWQVLIIPCIVTLILGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I G + L + + S + ++ I + I + T Sbjct: 124 IGALGLQKYDLLEAKLTKKTHNEAVISKSGLLFFEALNGKNQIIQTQFINISEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ID N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 VLFIDNNNNFLKRIDALYGIIENKSLHLNRVKVFT-KDSTEAHNNLTIPTNLSVNSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S +++ K + S + + +Y + P M++A ++A+ R Sbjct: 243 FTHPEMVSIWKLPKLIDELLNSGLP-ITNYQVYYYKQLFKPAMMIATIILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF++Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 DNSQEKILILGLFSGFIVYSLSEILLKVLTYNNLSLIAAILLPSMLIFFISNFIILH 358 >gi|261867783|ref|YP_003255705.1| 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413115|gb|ACX82486.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 372 Score = 86.3 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + L +P + Sbjct: 6 ILTRYLTKEIFKSQIAILFILLLIFFCQQLVRVLGSAAN-GKVPADLVFSLLGLGMPTMA 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ L SE+ + RA G+ L+ ++ S+L + Sbjct: 65 QLMLPLCLFIAILLTLGRLYAESEITVMRACGVGQPILVKVVLLLSLLTSGVAAYNALWL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ K N + ++ +N +FI + N+++ T Sbjct: 125 TPWAIHKQTEIVEDAKANPNVGALSAGQFVSANNSDFVLFIDDIQNNQINNVYVFQTQPR 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K +I + +L + N L ++ + + + Sbjct: 185 GQSKPSVIVAEKGELKALPNGDQVLNLQNSERFEGTAALPDFRITHFDEYQAYLGHKAVN 244 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S E+ ++ A+T+F++ + + L + M L+A +S R + Sbjct: 245 DDSAETEEL-----SLSQLLNTKTPAAKTEFHWRLTLILAVPIMALLAVPLSRVNPRQGR 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V + + + + + +KS G +G L + I+ L+IL+ Sbjct: 300 FAK-VLPALLLYLIYFLLQSSLKSAGGAGKLDAGLFMPLVNIVFFLLAILL 349 >gi|222099907|ref|YP_002534475.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] gi|221572297|gb|ACM23109.1| Permease YjgP/YjgQ family protein [Thermotoga neapolitana DSM 4359] Length = 1048 Score = 86.3 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 122/346 (35%), Gaps = 14/346 (4%) Query: 16 TTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVN 75 L L G + + I++ + + I + +L +P + +P L+ Sbjct: 2 PFLIGLGGFI-IFVSIEILYQLSDLIVRHRVGIGKLFLLLYYYLPYFVAMGVPVGVLLSI 60 Query: 76 IVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLI 135 F L+ EL+ + GIS L+ PF+ S+LL + + + + + + + Sbjct: 61 FWTFSKLSEDRELMAIQVHGISQKNLIVPFLFLSVLLSVIVFFLNDQVVPVYQSRAEEAM 120 Query: 136 QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKD 195 ++ + IS +D + +K + + + + KI+ Sbjct: 121 SKYVLKKPEVFVVENV---ISKIGEDQYFYVEKYDEKTNTLWNVVIFKYGSEEKIVTA-- 175 Query: 196 ADLAIIYNDKVKLKKVVEYQ-----YGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 ++ L Y + ++ + + L+I ++ + + + Sbjct: 176 -KRVQKREERWYLFDGRYYTVDKDGFLKLDVHFSEMELDITEDIENLLRVGKTPREMTGK 234 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 E+ +K+ F K I + + L + + L+ +SL F ++ ++ Sbjct: 235 ELKEKIEFFRKVGIKPSP-WIVELQSRYANSLTPIVIVLVGVPLSLLFQLRSKSWGVIFT 293 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + + + GK +L P A IP I+ + L+ + Sbjct: 294 FVLV-VLYQGSGAWLSAMGKENLLDPGFAPWIPNIVFSVMGGLLFV 338 >gi|58040480|ref|YP_192444.1| hypothetical protein GOX2052 [Gluconobacter oxydans 621H] gi|58002894|gb|AAW61788.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 393 Score = 86.3 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 107/365 (29%), Gaps = 16/365 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY LL +I + + L + + + + S+ L +P Sbjct: 16 ILDRYLLTQMAPPFAIALLAMLIALLLERLLSLFDYLASAGS-SLGTCIALLTDLLPHYF 74 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P + + ++ +E+ +A +S+ ++ PF++ +LLG +V + I Sbjct: 75 GIALPAALCIAVFLTIRGMSDNNEIDALQAGRVSLMRISRPFMIVGLLLGAASVFLYGYI 134 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + G + S+ Sbjct: 135 QPVARYDYRAGFYFAEHTGWAPHLQAGMFASTSSKAVMTADSVSHAGTRLRRVFIREVNA 194 Query: 184 IDKKNKIIHRK------------DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP 231 + I R DL + ++ + ++ P Sbjct: 195 NGVAHIITARTGALTISEKTRSTRLDLWNGEIVDDPFQATKPHKPTVTHFEHVVRVIDRP 254 Query: 232 IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 K F+ + +E+ + + + RAE F + + + + +A Sbjct: 255 NKETSFRSRGADERELTLFELAHDLRYGLPGIEYRTLRAEMD--FRMARAIAIPFIPPLA 312 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 ++++ R ++A + + S +G L A +P +L Sbjct: 313 VALAISARRRKSVWGLIAVAVIL-IGFDQTLMFGHSLASTGRLPIWLAIWVPELLFCVGC 371 Query: 352 ILILL 356 + LL Sbjct: 372 LAALL 376 >gi|332290237|ref|YP_004421089.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] gi|330433133|gb|AEC18192.1| putative permease YjgP/YjgQ family [Gallibacterium anatis UMN179] Length = 363 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 121/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y K LK+ L L +++ L + N + L +P + Sbjct: 2 ILTKYLIKETLKSQLAILFILLVIFLAQQLVRVLGSAVN-GNVPVDVILPLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ L SE+ + +A GI L+ ++ SI+ + Sbjct: 61 QLMLPLSLFLALLLTLGRLYSESEITVMQACGIGPNALVKVGLILSIVTAAIAAYNSLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++++ K N ++ +N +F+ K + I+ T Sbjct: 121 TPWALKKQVEVVENAKANPSASAITPGQFISSNNGNFVLFVDKVKGDQLSDIYLFQTRQV 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K +I + + + + L ++ + + + + Sbjct: 181 GKVKPSVIVAEQGNFSTAKDGSQTLALKNGERFEGSAVLPEFRVTHFQDYLAFLAFNPAK 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 M SN + A+ + + I + L + M LIA +S R + Sbjct: 241 AEEADLD-----MQDSNALLKNSSANAKAELQWRISLFLAVPLMMLIAIPLSKVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + +K+ G +G + ++ +L + L I++ Sbjct: 296 FAK-IIPALLLYLIYFLLQSSLKTAGINGKIESHYWMILVNMLFLLLGIIL 345 >gi|329114705|ref|ZP_08243463.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] gi|326695971|gb|EGE47654.1| Permease YjgP/YjgQ Family Protein [Acetobacter pomorum DM001] Length = 411 Score = 85.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 12/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 PG L RY + L L MI + + L + N + N I L A +P Sbjct: 32 PGTLDRYLIAQVMPPFLVALSVVMIALILERLLVLFN-LLAAGNNHIGIFIGLLAALLPH 90 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP V V +++ E+ + G+S+ ++ P++ ++LGI + L+ Sbjct: 91 YLGLAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGVILGILSFLLYG 150 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI-FIGAKKILPENHIWEDFT 180 I G + + S+ + ++ +++ Sbjct: 151 FIQPHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDL 210 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPIKM 234 S ++ + ++ L V + D ++ L + Sbjct: 211 SEQQERDITARNGHIRIGLDGETVEIDLTHGVIVTDKGDGVPSLVTFDHSTRYLTHASHV 270 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 F+ E + E++ ++ + S + R+E +F + L + + L+AAS+ Sbjct: 271 SPFRTRGEDERELTSPELVGRLIRHDPSISRPHMRSEV--HFRMARSLTVPFIPLLAASL 328 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +L R + II S + + P ++ I L+ Sbjct: 329 ALMRKRQRNNA-GLPLAFIIMVGFDHIIQFGHSMVATKKASLLL-IWGPSLVFIVGCTLL 386 Query: 355 LLQK 358 LL K Sbjct: 387 LLYK 390 >gi|77463457|ref|YP_352961.1| permease [Rhodobacter sphaeroides 2.4.1] gi|77387875|gb|ABA79060.1| Predicted permease [Rhodobacter sphaeroides 2.4.1] Length = 376 Score = 85.9 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 111/358 (31%), Gaps = 9/358 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY + +F L +++ ++ + + + S + +P +I+ Sbjct: 4 FDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLIS-DGQSALVFLEFSLLALPNVIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P I V L++ SELV+ +A G S ++L P + +++ + ++++N + Sbjct: 63 LVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + N + ++ ++ + + Sbjct: 123 PASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPA 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKK----VVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + + + + T ++ M G Sbjct: 183 RSTAYTARRALLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLEFS 299 ++ + + A + + I P + A +LI A++ L Sbjct: 243 RRVLEELPTMTLLAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSF 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS-GILLPVAAALIPVILTISLSILILL 356 + + + ++ TI G + L P+ A + ++ IL+L Sbjct: 303 SRFGLWWQILFAVLLLIVVQTINVAASGVGVTDEQLWPL--AYAAPVTGFAIGILLLW 358 >gi|257487385|ref|ZP_05641426.1| hypothetical protein PsyrptA_29198 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 205 Score = 85.9 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 8/212 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L L L + LV + + + + Y+++ P Sbjct: 1 MVK-LDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDT--YTLADALSYVMLTAP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +SEL I RA G+SI +++ + +LL + VLV Sbjct: 58 RRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLLLMVAGVLVG 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + +GD Q + W + + I + N + T Sbjct: 118 EYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINT-----VQPNGLMLGVT 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVV 212 D + ++ A A D +LK V Sbjct: 173 RYRFDDQRHMLTSSFAKEANFKTDYWELKDVS 204 >gi|325578600|ref|ZP_08148700.1| inner membrane protein YjgP [Haemophilus parainfluenzae ATCC 33392] gi|325159836|gb|EGC71966.1| inner membrane protein YjgP [Haemophilus parainfluenzae ATCC 33392] Length = 363 Score = 85.9 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 121/356 (33%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + L +P + Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFSQQLVRVLGSAAN-GKVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+ + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVALILSLFTAGLAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ K N +M SN +FI + ++ Sbjct: 121 SPWAIQKQAAIVEDAKANPTMGALTSGQFMSTSNNNFVLFIDKINGNQISDVYLFQMKAK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLK-----KVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 K ++ + +L + N L +V + + Sbjct: 181 GQTKPSVVTAEKGELKALPNGDQVLNLQNTLRVEGTSVLPDFRITHFDDYQAYLGHQETN 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S++ A SF +++K S + K+ + ++ I + L + M LIA +S Sbjct: 241 TESDEAAELSFEQLLKDKSSAAKAEL----------HWRITLILAVPLMALIAVPMSKVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + KS G +G L + I + L I++ Sbjct: 291 PRQGRFAK-ILPALLLYLIYFLLQSSFKSAGGAGKLDAGLLMPLVNIAFLILGIVL 345 >gi|218885480|ref|YP_002434801.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756434|gb|ACL07333.1| permease YjgP/YjgQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 379 Score = 85.9 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 112/329 (34%), Gaps = 10/329 (3%) Query: 36 IQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIG 95 ++ + ++ +L P + ++P ++ + F ++ ELV +A G Sbjct: 23 QLRELFLGLDLGLADAVLLFVYLTPFFMLLVVPVACMLSVFLTFLRMSTDRELVALKAGG 82 Query: 96 ISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 +S++Q+L ++ +L + T+ + G + ++ + + + Sbjct: 83 VSLYQMLAAPLLFCVLCTLLTLGISLQGLAWGMANFRATVMDIANSRARVVVQPGVFNKD 142 Query: 156 SN-------PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKL 208 +++ E+ ED T + I + + +L Sbjct: 143 IPGLTLFARQVDPADNRLSQVIVEDRSREDSTLTILAPTGAIATDEARGELLFRLQNGRL 202 Query: 209 KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN- 267 K Q + + +++ + G + S+ ++ K N+ Sbjct: 203 YKTEGQQVSVLGFGEYVVRIDLGLMFKGLDLGRVKPKELSWEQLRALPLDDGKGNVDDKL 262 Query: 268 -YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 + + + V P + + L A ++ F ++ V + + Y++++ Sbjct: 263 LRKVAVEVHKRWVFPAACLVLGLFAMPLACAFEGLHRQ-FGVVLALLMFLVYYSLLSFGL 321 Query: 327 SFGKSGILLPVAAALIPVILTISLSILIL 355 + G++G + P P +L + + L Sbjct: 322 TTGEAGTIAPEVGLWTPNVLFLGAGLWGL 350 >gi|294678216|ref|YP_003578831.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] gi|294477036|gb|ADE86424.1| permease YjgP/YjgQ family protein [Rhodobacter capsulatus SB 1003] Length = 376 Score = 85.9 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 106/361 (29%), Gaps = 10/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + +F L + + +V + +++ + A +P Sbjct: 1 MKRLDRYLLSQLMAIFGFFALVLVSVYWVNRAVLLFDKLIG-DGQTAWVVLEFTALTLPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I ++P + L+ SELV+ ++ G S W+L P V +++ + +++ Sbjct: 60 VISLVLPVAAFAAVLYAINRLSGESELVVMQSAGASPWRLARPVAVFGLIVAALMLALVH 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + Q + + + + + I+ Sbjct: 120 ELVPASRARLAERQAQVSQDVTARFLTEGSFQTPTAGITVYIREISDLGELLDIFLYDAR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKK----VVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + + V + + T ++ + Sbjct: 180 GQRAETIYTAEKALIVPSEAGPKLVMFDGTAQTLRPSDGSLALTRFSDFTYDLGGAIGTG 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL- 296 + + ++I + A + + PLM LIAA+ + Sbjct: 240 LRGRIDWEEVPSRDLIAPGPELLAATGSTVAAAHLELNDRLAQPLMAPVAALIAAAAMML 299 Query: 297 -EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 FSR + + + L ++ + S ++ + A L + + Sbjct: 300 GGFSRLG-LWRQIGLAVLALIGLQSLSNVATSMTRAD--PALWALHYMPALAGLAGVALA 356 Query: 356 L 356 L Sbjct: 357 L 357 >gi|83594275|ref|YP_428027.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] gi|83577189|gb|ABC23740.1| permease YjgP/YjgQ [Rhodospirillum rubrum ATCC 11170] Length = 396 Score = 85.9 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 102/328 (31%), Gaps = 15/328 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + L + ++L+++I+ + + S++ L +P + Sbjct: 5 TLHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNK-GLSVATFLRLTLLLMPGFL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP V + + L EL++ RA G+ WQL P + +L + + Sbjct: 64 TVFIPIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSV 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWE 177 + E + + + + + + ++ ++ + + Sbjct: 124 VPAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDTTGK 183 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + ++ + ++ N + + + + D + L Sbjct: 184 TSDLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDSYAVDLGGKAASTEM 243 Query: 238 QKFSEQFASRS---FYEIIKKMSFSNK--SNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + E+ S + ++ H R + + ++ PL + LI Sbjct: 244 RFREERERPLSELISLKAGDRIDPDYPFTYEERHIRRMRMEAHLRLLRPLAHIGFLLIGL 303 Query: 293 S--VSLEFSRSNQPRIIVAYGIFSGFML 318 + ++ EF R V + + Sbjct: 304 AAVLTGEFDRRGGN-KRVILAVALVVLF 330 >gi|126462312|ref|YP_001043426.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] gi|126103976|gb|ABN76654.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17029] Length = 376 Score = 85.9 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 110/358 (30%), Gaps = 9/358 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY + +F L +++ ++ + + + S + +P +I+ Sbjct: 4 FDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLIS-DGQSALVFLEFSLLALPNVIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P I V L++ SELV+ +A G S ++L P + +++ + ++++N + Sbjct: 63 LVLPLSAFAATIYVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + N + ++ ++ + + Sbjct: 123 PASRATLSARSAEISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPA 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKK----VVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + + + + T ++ M G Sbjct: 183 RSTAYTARRALLVRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLEFS 299 ++ + + A + + I P + A +LI A++ L Sbjct: 243 RRVLEELPTMTLLAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSF 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS-GILLPVAAALIPVILTISLSILILL 356 + + + ++ TI G + L P+ A + + IL+L Sbjct: 303 SRFGLWWQILFAVLLLIVVQTINVAASGVGVTDEQLWPL--AYAAPVTGFVIGILLLW 358 >gi|56479504|ref|YP_161093.1| hypothetical protein ebA7173 [Aromatoleum aromaticum EbN1] gi|56315547|emb|CAI10192.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 359 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/356 (10%), Positives = 114/356 (32%), Gaps = 10/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + + ++ + ++ + L + Q L + Sbjct: 2 IFSRALQREFFQSAAGVFVALFAILITVVLIRLLGQAAG-GRLPSDAVLALIGFGSLSRL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + ++ R SE+V+ A G+ + + P + ++ + + V + Sbjct: 61 PIVLSLTVFIAVLLSLSRSYRDSEMVVWFASGLPLTAFIRPVLRFALPIVLTIAAVTLFV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILP-ENHIWEDFTSI 182 A + + + D + + + Q+ F+ + T Sbjct: 121 APWAQLKSAEYQARIDSRNDASRIAPGVFRESVGAQRVFFVETGAGEDGKVRNVFVSTEK 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + V L+K Y+ + + + ++ + Sbjct: 181 DGRLDVIVSAEGSLRTDAEGDRFVVLEKGRRYEGEPGSPEYRVLEFDRYSVLVEEREAAG 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + S ++ ++ R + I +P+ + + L+A +S R+ Sbjct: 241 PASRTSTTPTLELLAD-------PTPRKLGELLGRIGMPVAALLLALMAIPLSFVNPRAG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + I + + I++ +++ G L A +P ++ +++ L+ ++ Sbjct: 294 R-ANNLLFAILTYLVYSNAISVFQAWVSQGRLRFELAVWLPHVVVLAVLALMFYRR 348 >gi|296116656|ref|ZP_06835266.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] gi|295976868|gb|EFG83636.1| permease YjgP/YjgQ family protein [Gluconacetobacter hansenii ATCC 23769] Length = 386 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 118/364 (32%), Gaps = 16/364 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L + +L+++ + + S+ L + +P + Sbjct: 17 ILDRYVLRQLLLALVATTGALALLIWLTQSLHFVSLVVGR-GLSLRVFVQLTSLLIPSFV 75 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P T VV ++ L EL + +A G+S + + P ++ +++ + + + Sbjct: 76 AVILPITTFVVVQFIYQRLGSDRELTVMQAAGLSPFMMARPALLCALVSVLACYALNLWV 135 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + Q ++ + Q+S+ + I + Sbjct: 136 VPTAYHGFRQYEYQIRNKMAAFLIQDGVFTQVSDNMTVYIRARDPSGMLHGIMVEDDRQP 195 Query: 184 IDK------KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + + D +++N + + + ++N+ L+ G Sbjct: 196 DAQATILAEEGSFVITNDQPRIVLFNGSRQEIDRKTGRLNMLSFERNTIDLSA---PHGT 252 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA--SVS 295 Q ++ + + + + + + PL + +I ++ Sbjct: 253 QTRQPDANELPITALLHP--NLRQFSPRDEKKMIIEAWRRLTSPLCAFSFAMIGLLSALG 310 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 FSR VA + + + + ++ L+P+ + +L + + +L Sbjct: 311 GGFSRHGNIVRPVAATLAVVAVQALTLLVQNLASRNLALMPL--MWVSAVLPGMVCMAML 368 Query: 356 LQKE 359 E Sbjct: 369 FWPE 372 >gi|301058944|ref|ZP_07199913.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] gi|300446940|gb|EFK10736.1| permease, YjgP/YjgQ family [delta proteobacterium NaphS2] Length = 358 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 100/341 (29%), Gaps = 11/341 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K + M + + S +L R+ + + Sbjct: 2 IIDRYIMREISKPAMTICTVLMGIFGSYIATRYLEDAVQ-GQLPGSTVILLVLLRIAISL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + ++P + ++ F +E+ A GIS+ ++L P ++ ++ G+ I Sbjct: 61 EVLLPTTLYLSVMIAFGRFYMNAEMTGMSACGISMVRVLKPVMLLAVTAGMIVACFSLYI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF--IGAKKILPENHIWEDFTS 181 +L K + D + + +I + ++ +F H++ Sbjct: 121 RPWAWNQFFELKTGAKVDFDITRMKGGNFYEIEDGERVLFADKVDHGKHRALHVFMQIKR 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + Y + S Sbjct: 181 HGELEIVYAESATQRFRNTTPEPVLVFQNGRLYTFSETEKTWKILQFRNLEM-------S 233 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + K + + + A + + + P + + L+ +S F R Sbjct: 234 LTSNNVEPLKQKAKAFSTEQLWHSDHPEALAELQWRLTAPFSTILLALLGVPLSRSFPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + V GI + Y + I K + G++ V Sbjct: 294 GKYTK-VPLGILVFAVYYNLSAITKKWVGQGVVGGVPGIWW 333 >gi|293390144|ref|ZP_06634478.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950678|gb|EFE00797.1| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 372 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + L +P + Sbjct: 6 ILTRYLTKEIFKSQIAILFILLLIFFCQQLVRVLGSAAN-GKVPADLVFSLLGLGMPTMA 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ L SE+ + RA G+ L+ ++ S+L + Sbjct: 65 QLMLPLCLFIAILLTLGRLYAESEITVMRACGVGQPILVKVVLLLSLLTSGVAAYNALWL 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ K N + ++ +N +FI + N+++ T Sbjct: 125 TPWAIHKQTEIVEDAKANPNVGALSAGQFVSANNSDFVLFIDDIQNNQINNVYVFQTQPR 184 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K +I + +L + N L ++ + + + Sbjct: 185 GQSKPSVIVAEKGELKALPNGDQVLNLQNSERFEGTAALPDFRITHFDEYQAYLGHKAVN 244 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S E+ ++ A+T+F++ + + L + M L+A +S R + Sbjct: 245 DDSAEAEEL-----SLSQLLNTKTPAAKTEFHWRLTLILAVPIMALLAVPLSRVNPRQGR 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V + + + + + +KS G +G L + I+ L+IL+ Sbjct: 300 FAK-VLPALLLYLIYFLLQSSLKSAGGAGKLDAGLFMPLVNIVFFLLAILL 349 >gi|296115281|ref|ZP_06833921.1| putative permease [Gluconacetobacter hansenii ATCC 23769] gi|295978184|gb|EFG84922.1| putative permease [Gluconacetobacter hansenii ATCC 23769] Length = 406 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 48/369 (13%), Positives = 112/369 (30%), Gaps = 15/369 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MPG L Y + L M + + L + N + + S+ L VP Sbjct: 9 MPGTLDHYLLQQVTPPFSISLGVVMAALLLERLLALFNLLASNGS-SMKTFVSLLTDLVP 67 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P V V +++ E+ A G+S++++ PF+V +LG+ + + Sbjct: 68 HYLGLALPAAMCVSVFSVIRRMSQNHEIDALMASGVSMFRIARPFIVVGAILGVLSFSLY 127 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + +G + S+ Sbjct: 128 GFIQPYARYNYRSALYFASHSGWAPHLQSHMFAAPSHDLMLTAEKVDDAGSRMFKVFIRD 187 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKL-----------KKVVEYQYGRIPIDKNSTTLN 229 + D I RK DK++L + + Sbjct: 188 NSNHDLTRYITARKGYLYIPNDEDKIRLDLIDGTIITDRHDKSPSVIHFDHTTELFSPHA 247 Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 K+ ++ + + E+ + + AE +F + L + + L Sbjct: 248 QLDKLKAYRTRGQTERELTLPELYRGIRHGMPGIKHSYLVAEL--HFRLARTLAIPFIPL 305 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 +A ++++ R + + + + + + S + + P+ +P ++ Sbjct: 306 LACALAVMAKRQKR-SLGLPIAAIALVGFDHTLQMGLSLVANVHMSPLLVIWLPTLVFGI 364 Query: 350 LSILILLQK 358 + L+ + Sbjct: 365 GCVWALIWR 373 >gi|118594056|ref|ZP_01551403.1| permease YjgP/YjgQ [Methylophilales bacterium HTCC2181] gi|118439834|gb|EAV46461.1| permease YjgP/YjgQ [Methylophilales bacterium HTCC2181] Length = 372 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 37/353 (10%), Positives = 115/353 (32%), Gaps = 5/353 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + T+L +L +V I + + + + + ++ Sbjct: 7 LTRELFFTSLSTILVLSGIVVAQRAV-IVFRFAARGSIPNDAIDTVLVFNLLKHMPLLLS 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++ + SE++I + G+ ++ L+ P ++ + I + I+ Sbjct: 66 LTVFITILITLSRWYKDSEMIIWFSSGLGLYSLIKPIILFCFPIIILIASLSLYISPWAV 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSITIDKK 187 + + K + + + + + +I G + + + Sbjct: 126 QKAEEYKTGLKSRDEIATITPGTFKESKSNNRIFYIEGFSSLGSKVKNIFIQSMQNGKLG 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM--DGFQKFSEQFA 245 + + + N+ + LK Y+ + ++TT + + + A Sbjct: 186 VIVSNEGERIEDNNNNNYIVLKNGRRYEGIANSKEFSTTTFDEYGILMEKTPKNNLNVGA 245 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 E ++ N + + + + I +PL + + +A +S +R+ + Sbjct: 246 KAGIIEATPTLALIFNQNDSNRKQFLAELMWRISLPLSTIFLIFLAIPLSFINNRTGRSF 305 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ +F + + I +S G + L ++ ++ +L ++ Sbjct: 306 NMIV-AVFIFVIYNNFLGIFQSLISVGKIPLWLGFLPVHLVFGLVAFYLLHRR 357 >gi|99080790|ref|YP_612944.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] gi|99037070|gb|ABF63682.1| permease YjgP/YjgQ [Ruegeria sp. TM1040] Length = 379 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 106/357 (29%), Gaps = 11/357 (3%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY YL +F L + + ++ + + + S+ ++A +P +++ Sbjct: 5 DRYVLSQYLLFFGFFALILVAVFWINRAVSLFDWLIG-DGQSVLAFLEISALSLPNLVRM 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P + V LN SEL + RA G S WQL P +V +L + + Sbjct: 64 VLPLAAFAATVWVTNRLNSESELTVLRATGSSPWQLARPAMVFGLLSAAMMSALSLFLLP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + + + + + ++ S + +++ Sbjct: 124 ASLAQMQFREAELSRSVSAKLLNAGSFLHPSEGITFFIGSIEPDGTLQNVFLTDQRDPSV 183 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ------- 238 + R + + + + + + + + Sbjct: 184 EITYTSDRAYLVREDDEAHLILVDGLAQRKEAHNDRLSTTAFSDFSYPLGDLSPARAAGA 243 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + ++ + + + V M ++ + F Sbjct: 244 RPLRNIPTLDLLRERASITEEEGHSAGAQAEELHLRFARAAVTFA-VVMIGVSTLLMGGF 302 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 SR + ++ + + + ++ + P+ +P L + +S+L L Sbjct: 303 SRFGIWKQVLGAFVLLILIEGMRGVVADPVRENAAMWPLI--YLPATLGVMISVLFL 357 >gi|312170934|emb|CBX79193.1| Inner membrane protein yjgP [Erwinia amylovora ATCC BAA-2158] Length = 366 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 114/339 (33%), Gaps = 7/339 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLTLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ + + L + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKAAMILMLFTALLAALNVGWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++Q K N + Q ++ Q +FI K +++ Sbjct: 121 GPWSARYQNEVMQNAKANPGAAALAAGQFQQSADGQSVLFIENVKGNTFRNVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + + ++ + ++ + Sbjct: 181 GNARPSVVVAEQGRMEQRVDGSQIVTLDSGTRFEGTALLRDFRITDFKNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + ++ ++ + + ++ M L+ +S+ R + Sbjct: 236 HQAVTLDPNDSEQMSLDTLWHSGKPDFRSELHWRLTLVFSVLIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + + + + + + ++S G G + P A Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSLRSSGGKGRIDPAVAMWA 333 >gi|77165379|ref|YP_343904.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|254433097|ref|ZP_05046605.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] gi|76883693|gb|ABA58374.1| permease YjgP/YjgQ [Nitrosococcus oceani ATCC 19707] gi|207089430|gb|EDZ66701.1| putative permease, YjgP/YjgQ family [Nitrosococcus oceani AFC27] Length = 381 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 34/351 (9%), Positives = 103/351 (29%), Gaps = 19/351 (5%) Query: 1 MPG--ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I+ RY K L +++ I +Q E L+ Sbjct: 1 MFKLLIVDRYILKELSLNATAITLVLLLIFGGIRFIRFLSQATE-GKVPGEAILALSGYE 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 + ++P + + ++ + +E++ A G+S LL + + L I Sbjct: 60 AIGALVLLLPLASFLAVLLALGRMGADNEVIALFACGVSRGHLLRVVLTFGLALAIGVGG 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + + + G L QQ + + + + Q+ + + Sbjct: 120 ISLYLGPAASAEGYRLKQQALLAAETSGLVAGNFKEAQHGQRVFYAESLTEDGLGMKNVF 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIY--NDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 +K + + + + L+ Y+ + + + Sbjct: 180 IQVWEPTQKTLLRAARGHLQTDEATGDKYLILEDGYRYELMGEEVGVRIFSFERHGILVK 239 Query: 237 F---QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 Q+F + + + + + + + I +P++ + + ++A Sbjct: 240 KGGAQEFRIRHQTLPTLTLWE----------MGAPKDIAEVQWRISMPIITLLLVMLAVP 289 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 ++ R + + + + ++ I +++ + ++ Sbjct: 290 LARSGPRQGRYA-GLVPAVLVYVIYSNMLGIARNWVEHEVIPASLGLWWIH 339 >gi|226943298|ref|YP_002798371.1| YjgP/YjgQ family permease [Azotobacter vinelandii DJ] gi|226718225|gb|ACO77396.1| permease YjgP/YjgQ family [Azotobacter vinelandii DJ] Length = 376 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 36/351 (10%), Positives = 105/351 (29%), Gaps = 17/351 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + L T + ++ + Q + + RVP + Sbjct: 5 IIPRYLSRELLMTLGAVSAVLLAIIMSGRFIKYLAQAAQ-GLLDPGVLLQIMLYRVPSFL 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++ + L SE+ + A G+S +L +V +I + + + Sbjct: 64 ELILPLGLFLGILLAYGRLYLDSEMTVLAATGMSPQRLAVYTLVPAIPVAALVAWMSLGL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGA--------KKILPENHI 175 A G ++ L+ + K + + + + + ++ ++ Sbjct: 124 APQGIRLVEQLLNEQKALTEFDTLVPGRFQTMKDGSRVTYVEDLTDDRTELSRVFISEKQ 183 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + ++ + + L+ Y D + + Sbjct: 184 MSRDGGKERGIAVLVAEGGRQEVQADGSRYLILQNGYRYDGNPGEADYRVIRYDTYGVLL 243 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 S + R + + R + + + + +PL++ + ++A ++ Sbjct: 244 ARPAVSSEINEREAIPTSELI-------GSDQPRHQAELQWRLSLPLLVFVVAVLAVPLA 296 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 R + + + I + ++ G + + + Sbjct: 297 RANPRQGR-FLKLLPAILLYMAYLATLIAVRGELDKGKIPMLIGLWWVHGV 346 >gi|312113656|ref|YP_004011252.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218785|gb|ADP70153.1| permease YjgP/YjgQ family protein [Rhodomicrobium vannielii ATCC 17100] Length = 387 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/373 (12%), Positives = 121/373 (32%), Gaps = 29/373 (7%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY F+ + L+ ++V++ L ++ + + A +P +I Sbjct: 2 LISRYIFRQTASALIMILVSLTLIVWLTSLLREI-KLLTAQGQTFLLFLQITALAIPSLI 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P L+ + L+ SEL++ A G S+W+L +P++ ++++ + + + Sbjct: 61 VTVAPVAFLIAALHSLNRLSGDSELIVLSAAGSSVWRLFSPYLFLAVVVSMCVLTANLFV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ D + Q + + Q + S+ + + + + Sbjct: 121 LPNAARLLGDTVSQVRADVLSQVIQPGEF---SDLEPGLTFHMRAKGDNGELLGVVVRDE 177 Query: 184 IDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDG 236 D K + + + + L + S +I Sbjct: 178 RDPKAVTTVIAEQGQILQDGGRASMMLHDGQIIRQQAEKTAAQVVVFTSYAFDIGDFSAK 237 Query: 237 FQKFSEQFASRSFYEI----IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + R E+ + +++N F + E L I ++A+ + Sbjct: 238 KGPRERKPRERDIGELLFPDKESPAYTNTKGSFRSEIHERFSGALYPIAFAIIAVLYLGR 297 Query: 293 SVSLEFSRSNQPRIIVAYG----IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 + R+ G I + + + G + + + Sbjct: 298 PKTTREGRTGNLFTAFTLGAAIRIAGIAGVNIVGKKAWALGLIYGIP----------VAV 347 Query: 349 SLSILILLQKEDG 361 ++ L++L+ + G Sbjct: 348 IVAGLVMLRLDIG 360 >gi|260771005|ref|ZP_05879934.1| predicted permease [Vibrio furnissii CIP 102972] gi|260614242|gb|EEX39432.1| predicted permease [Vibrio furnissii CIP 102972] Length = 347 Score = 85.5 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 31/333 (9%), Positives = 98/333 (29%), Gaps = 11/333 (3%) Query: 23 GAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNL 82 ++ + + + +P + ++P + ++ F L Sbjct: 1 MLFLVFLSQKFIRVLADASD-GEIPARLILSIVGLNMPAMGLLMLPLSLYIGILLTFGRL 59 Query: 83 NRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNG 142 SE+ + A GI L+ + ++ ++ + +++Q Sbjct: 60 YAESEITVMNATGIGNKFLIRAALYLGVITSCLAGFNALWLSPWSQDKVQSVMEQLAAEN 119 Query: 143 DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW--EDFTSITIDKKNKIIHRKDADLAI 200 + + + +FI + ++++ + +I D Sbjct: 120 SVDLLQKGQFQRSPDGSSVVFIDNIENKKLSNVFVAQLTPRESILPSVMFSDAGDVKELS 179 Query: 201 IYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN 260 + + Y+ +D T + + G + E+ ++ + ++ Sbjct: 180 DGRQVITMYNGTRYEGVPTRVDYMVTKFDEYEGLIGQRAVKEKGRDWEAIPTLELIKNAD 239 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 +S + I + + + +T++ +S R + + I + Sbjct: 240 RSAQAE-------LQWRISLVVCIPLLTMLVVPLSAVNPRQGRFAK-MGPAILIYLTYFL 291 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 I+ KS + G + + + +I+ Sbjct: 292 AISATKSALEDGSIPAIVGMWPINAALLISAII 324 >gi|91774577|ref|YP_544333.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] gi|91708564|gb|ABE48492.1| permease YjgP/YjgQ [Methylobacillus flagellatus KT] Length = 361 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/356 (10%), Positives = 113/356 (31%), Gaps = 16/356 (4%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R + + T + L +V + + + + L + + + Sbjct: 5 RSLLQELVTTAIGGFLVLFGIVIAQRVAYYIG-VAAKGSLASDAINTLLGFSMLKFLPMM 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + ++ +R SE+V+ + G + + P + + + + L+ + Sbjct: 64 LSLTLFLAVLLTLSRWHRDSEMVVWFSAGQGLSSWIRPVLTFGLPVIVVIALLSLFVTPW 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSITID 185 G + Q K + + + + + F ++ + Sbjct: 124 ATGKGAEFRDQLKSRDELASISPGVFKESRHADRVFFVESFDELGNIVKNIFVQSMQHQK 183 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKFSE 242 + R + A +D + ++ Y+ + I I+ Q+ Sbjct: 184 LGIIVAARGHRETAENGDDFLVMQNGRRYEGTPNTAEYSITEFERYAIRIEPAEVQQQPP 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 S++ E+ + H+ + + + + IP+ + L+A +S RS Sbjct: 244 NTQSKNSLELFNE----------HSPDSIAELQWRLAIPISAFVLILLAIPLSFVDPRSG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + + +++IM+++ G + + + L+ + ++ Sbjct: 294 RSA-NLMMALLIYIVYNNLLSIMQAWLSQGKVPAMVGLWPVHAFFLLLTFWMFYRR 348 >gi|22124660|ref|NP_668083.1| hypothetical protein y0747 [Yersinia pestis KIM 10] gi|45440496|ref|NP_992035.1| hypothetical protein YP_0644 [Yersinia pestis biovar Microtus str. 91001] gi|51594884|ref|YP_069075.1| membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108808932|ref|YP_652848.1| hypothetical protein YPA_2941 [Yersinia pestis Antiqua] gi|108810813|ref|YP_646580.1| hypothetical protein YPN_0648 [Yersinia pestis Nepal516] gi|145600504|ref|YP_001164580.1| hypothetical protein YPDSF_3250 [Yersinia pestis Pestoides F] gi|153948230|ref|YP_001402496.1| permease [Yersinia pseudotuberculosis IP 31758] gi|153997518|ref|ZP_02022618.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162420063|ref|YP_001608339.1| hypothetical protein YpAngola_A4048 [Yersinia pestis Angola] gi|165925825|ref|ZP_02221657.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165936618|ref|ZP_02225185.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|166010128|ref|ZP_02231026.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166214282|ref|ZP_02240317.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|167398727|ref|ZP_02304251.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420598|ref|ZP_02312351.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423158|ref|ZP_02314911.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025893|ref|YP_001722398.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186893894|ref|YP_001871006.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|218930456|ref|YP_002348331.1| hypothetical protein YPO3440 [Yersinia pestis CO92] gi|229839084|ref|ZP_04459243.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896572|ref|ZP_04511739.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|229899647|ref|ZP_04514788.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901016|ref|ZP_04516140.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|270489196|ref|ZP_06206270.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294505144|ref|YP_003569206.1| hypothetical protein YPZ3_3035 [Yersinia pestis Z176003] gi|21957469|gb|AAM84334.1|AE013676_7 hypothetical protein y0747 [Yersinia pestis KIM 10] gi|45435353|gb|AAS60912.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51588166|emb|CAH19772.1| putative membrane protein, permease [Yersinia pseudotuberculosis IP 32953] gi|108774461|gb|ABG16980.1| membrane protein [Yersinia pestis Nepal516] gi|108780845|gb|ABG14903.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349067|emb|CAL22029.1| putative membrane protein [Yersinia pestis CO92] gi|145212200|gb|ABP41607.1| membrane protein [Yersinia pestis Pestoides F] gi|149289155|gb|EDM39235.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152959725|gb|ABS47186.1| putative permease [Yersinia pseudotuberculosis IP 31758] gi|162352878|gb|ABX86826.1| putative permease [Yersinia pestis Angola] gi|165915267|gb|EDR33877.1| putative permease [Yersinia pestis biovar Orientalis str. IP275] gi|165922437|gb|EDR39614.1| putative permease [Yersinia pestis biovar Orientalis str. F1991016] gi|165991035|gb|EDR43336.1| putative permease [Yersinia pestis biovar Antiqua str. E1979001] gi|166204514|gb|EDR48994.1| putative permease [Yersinia pestis biovar Antiqua str. B42003004] gi|166961404|gb|EDR57425.1| putative permease [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051231|gb|EDR62639.1| putative permease [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057328|gb|EDR67074.1| putative permease [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752427|gb|ACA69945.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis YPIII] gi|186696920|gb|ACC87549.1| permease YjgP/YjgQ family protein [Yersinia pseudotuberculosis PB1/+] gi|229682355|gb|EEO78447.1| conserved inner membrane protein [Yersinia pestis Nepal516] gi|229687139|gb|EEO79214.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695450|gb|EEO85497.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700350|gb|EEO88382.1| conserved inner membrane protein [Yersinia pestis Pestoides A] gi|262367137|gb|ACY63694.1| hypothetical protein YPD8_3022 [Yersinia pestis D182038] gi|270337700|gb|EFA48477.1| inner membrane family protein [Yersinia pestis KIM D27] gi|294355603|gb|ADE65944.1| hypothetical protein YPZ3_3035 [Yersinia pestis Z176003] Length = 364 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNVVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K ++ K N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ ++ + + + +Y + ++ + Q Sbjct: 181 GNQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGTALLRDFRITDFVDYQAVIGHKQVQ 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +S ++ + A +F++ + + + +V M L+ +S+ R + Sbjct: 241 QSSNGADQM-----SMKELWRSQEPDARAEFHWRLTLIVSVVIMALLVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S +G L P+ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSKAGNGQLDPLVWMWAVNGAYLALAIIL 345 >gi|294648981|ref|ZP_06726429.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292825116|gb|EFF83871.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 366 Score = 85.1 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 130/355 (36%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L +++ L +I + + + A R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVTALLTLIIMGGQLIKIFGRAAQ-GRLDGGVLLSIIAYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + + + I +++ Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLTRLLLPMTAVFLIVQAVLMCWG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A++G + L+Q ++ + ++ I+ + S Sbjct: 121 ASAGIRGYQSLMQTQAVRAGFDLVRPKEFISSGSYTIYAGSLSEDRKNLKDIFYYYKSDR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK +++I K+A I ND + +V+ + I ++ T + + Sbjct: 181 EDKPDQMILAKEATRVEIENDTASVVDLVQGRRYEIYPNQPRYTQAEFQSYRLRLENDKD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S E ++ +S S ++ + + I P ++V +A ++S R + Sbjct: 241 VNFES--EDVEALSMSKLWQKRDDFVVRGELGWRIFGPFVMVVALFLAVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ IF L ++ +K+ L A V+L ++ + +K Sbjct: 299 YYRLIP-AIFIFASLIVLMIAIKTRISKEELDIW--AYPAVLLIYGIAAALFTRK 350 >gi|91204945|ref|YP_537300.1| putative permeases [Rickettsia bellii RML369-C] gi|91068489|gb|ABE04211.1| Putative permeases [Rickettsia bellii RML369-C] Length = 362 Score = 85.1 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 141/357 (39%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + +L ++ + + +VP + Sbjct: 5 KTLSWYLAKLYFKCFFIILSILIGLLIISNLFDLLQKFKNMY-VPFDFFWRFILYKVPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LNQVSALISFTSMLFFLRNLTKNNELTAILSSGIHIWQVLIIPYIVTLILGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I G + L + + S + ++ I + I + T Sbjct: 124 IGALGLQKYDLLEAKLTKKTHNEAVISKSGLLFFEALNGKNQIIQTQFINISEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ID N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 VLFIDNNNNFLKRIDALYGIIENKSLHLNRVKVFT-KDSTEAHNNLTIPTNLSVNSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S +++ K + S + + +Y + P M++A ++A+ R Sbjct: 243 FTHPEMVSIWKLPKLIDELLNSGLP-ITNYQVYYYKQLFKPAMMIATIILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF++Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 DNSQEKILILGLFSGFIVYSLSEILLKVLTYNNLSLIAAILLPSMLIFFISNFIILH 358 >gi|302879722|ref|YP_003848286.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] gi|302582511|gb|ADL56522.1| permease YjgP/YjgQ family protein [Gallionella capsiferriformans ES-2] Length = 377 Score = 85.1 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 34/352 (9%), Positives = 110/352 (31%), Gaps = 8/352 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R + + + +V + L + ++ L + + Sbjct: 22 RALVLEFAGNGVLVFAILLGIVVISQLIRFLGEAVS-GKLAVDGVLALLGFSALNYLSVL 80 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + ++ R SE+V+ + GI + + + P + + + L+ ++ Sbjct: 81 LSMSLFIAILLTLSRCYRDSEMVVWFSAGIGLTRWIRPVALFAAPVVTVIALLSLVLSPW 140 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 K D Q + + + + + F+ + I F + Sbjct: 141 AMKRADDFKAQLESRDELATLTPGVFRESGQSDRVYFVETVDV-GNGRIGNIFVRSVQNS 199 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + + ++ + N L + +Y P +++ + + + + Sbjct: 200 QMGTMVAREGLQQTMPNGDRFLVLLNGTRYEGTPGERDYRIVEFERYAMRIESAASKQLL 259 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + + ++ + + +P+ ++L+A S+S R+ + + Sbjct: 260 PNVRTLSTL-----ELWRNPTRWNLSELEWRLGLPISAAVLSLLAISLSYVNPRAGR-SL 313 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + +I++ ++ G L P L + ++ L + Sbjct: 314 NLVLAMVLYMLYSNMISVTNAWVGQGKLSPGIGLWGIHALMLLITALFFYYR 365 >gi|307718797|ref|YP_003874329.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6192] gi|306532522|gb|ADN02056.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6192] Length = 361 Score = 85.1 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 122/343 (35%), Gaps = 13/343 (3%) Query: 23 GAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNL 82 + ++ +IDL + + + + L +P + +P TL +L Sbjct: 22 SFVTILELIDLFTNLVAYID-ADLTTFQILHLQLLYLPKCVTYSLPIATLFAVAFSLGSL 80 Query: 83 NRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNG 142 + ++EL+ GIS+++ + PFVV +L + +A +L+ Sbjct: 81 HASNELIALFGAGISLYRFVLPFVVCGLLFSGAYFFIEELLAIPSLTQKQELMAILMGRT 140 Query: 143 DKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIY 202 + + + + + + ++ +H D++ + R +A+ Sbjct: 141 SPTQVVNVTLVGE---ENRLVVHTRRYDDRSHTITRVLVYEKDEEGEFASRIEAERGTWD 197 Query: 203 NDK--VKLKKVVEYQYGRIPIDKNSTTLNIPI-----KMDGFQKFSEQFASRSFYEIIKK 255 D+ L++V Y K + + + + F + + E + Sbjct: 198 PDQREWVLQRVRRYIRDEEGNLKEESFEKLRTDLGEIQPEDFLQTRHSIDKMTLAEAGRW 257 Query: 256 MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSG 315 + ++ + + A T +Y I + L+A SV+ F + ++ + G Sbjct: 258 IQTLKRAGLPYR-EALTDYYKRISFAFTSFIVALLATSVAGRFKANALLLSLLLS-LSIG 315 Query: 316 FMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 Y + F K G L PV A +PV++ S SIL Sbjct: 316 VSYYVFQMVTTLFAKLGYLPPVVGAWLPVLVFFSGSILFFKYI 358 >gi|94984157|ref|YP_603521.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94554438|gb|ABF44352.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 367 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 125/367 (34%), Gaps = 15/367 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 RY L + L ++L+ + L + + + A L A VP Sbjct: 1 MKRFERYVLAEILPPLVGALGVVIVLLLLALLEGVIAPLLAKGANPLL-VARLVALNVPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q +P + ++ L SE+ + A G+ +L P ++ + L+ + T + Sbjct: 60 ALAQGLPIALMFAALLGLSRLAADSEIKAALASGVPTSRLFRPVLLLAALVTLGTFAINE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDK-----QKSDIIPWMQISNPQQDIFIGAKKILPENHIW 176 + T + + ++ + + + + + I +G E Sbjct: 120 LLVTRAKVQVQSVQREIVLDNPRVIGLGTRDGQGNLVLRDALNRAISVGEALPGGELRDL 179 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 T ++I + ++ ++L+ + T + + Sbjct: 180 RIVTMQAGLPPREVITAR-RGRLKPGSNVLELEDGQRITFQDARPVTVLTFARGSLPVQD 238 Query: 237 FQKFSE------QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 Q E + E++ +M + T + PL +A+ Sbjct: 239 VQASFEGGDATLKPIYLPLRELLARMQT-YRQQKVQAPADFTALHRKFAEPLAALALAFF 297 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 S+++ RS Q + + + + F Y ++ + G++G + PV AA P ++ + Sbjct: 298 VVSLAVFAFRSGQN-LGLVWALLLSFAYYATWSVFRVMGENGAVPPVLAAYAPDLIAVLA 356 Query: 351 SILILLQ 357 +L+L + Sbjct: 357 GLLLLWR 363 >gi|171463871|ref|YP_001797984.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193409|gb|ACB44370.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 371 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 104/351 (29%), Gaps = 6/351 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + TT L + ++ + I + VL A + ++ Sbjct: 7 LRRELSFTTGGVFLVLVTIMVTTLVIRILGYAAN-GAVNPEDTLVLIALATLGYLAVLLT 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 V ++V + SE+++ A G+S+ L+ P + + L I L+ + Sbjct: 66 VSLFVATLIVLVRWYKDSEMIVWLASGLSVTNLIRPILQFATPLIIVIALLALFVWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN-HIWEDFTSITIDKK 187 + + Q+ + D + + + ++ FI + S Sbjct: 126 RESTLISQRSQQRDDVSVVSAGQFKESAKAERVFFIEELDVDKSKVKNIFVANSKNGRLS 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + + + L Y+ D N + Sbjct: 186 IAVSSTGYIQNSEGGEKSIVLHNGRRYEGQPTQPDFRILEFNEYSTKIRSKDALAPAPR- 244 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 N N + + I +PLM + + LIA ++ R Sbjct: 245 --DREKTITELLNDPNPTSVNPNRAELLWRIGLPLMALGLVLIAIPLAYVNPRLGNYT-A 301 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + Y + + ++ + ++F G + A +L + ++ +++ + Sbjct: 302 MFYAVLIYLIYSNLLNLTQNFVSQGRISVFVAIWPIHLLALLITTVLIRNR 352 >gi|157826222|ref|YP_001493942.1| hypothetical protein A1C_06005 [Rickettsia akari str. Hartford] gi|157800180|gb|ABV75434.1| hypothetical protein A1C_06005 [Rickettsia akari str. Hartford] Length = 362 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 145/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L L ++L+ + ++ ++ + + S L ++P + Sbjct: 5 KTLSWYLAKLYSKCFLVILFLLIVLLIISNIFDLLQKFKNIY-VPFSFFWRLILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LGQVCSLISFTAMLFFLSNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I T G + L + + S S ++ I + I + T Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNGENQIIQTQFINVAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + LK+V N+ T+ + ++ Sbjct: 184 ILFVDSNNSFLKRIDALYGIIENKMLHLKRVKVCT-KEETKAYNNLTIQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + + +Y + P+M++A ++A+ R Sbjct: 243 FIRPEMVSIWSLPKLINELFNSGLPAIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+F GF+ Y++ I+ L AA L+P +L +S I+L Sbjct: 302 DNSQEKILILGLFLGFIAYSLSEILLKILTYNNLSLTAAILLPSMLIFFISNFIILH 358 >gi|313200017|ref|YP_004038675.1| permease [Methylovorus sp. MP688] gi|312439333|gb|ADQ83439.1| permease YjgP/YjgQ family protein [Methylovorus sp. MP688] Length = 355 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/346 (10%), Positives = 113/346 (32%), Gaps = 10/346 (2%) Query: 14 LKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLV 73 + T + L +V + + + + L + + I+ + Sbjct: 1 MGTAIGAFLVLFGIVIAQRVAYYIG-VAAKGSLASDAINTLLGFSMLKFLPMILSLTIFL 59 Query: 74 VNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGID 133 ++ +R SE+V+ + G+ + + P + +I + ++ + G + Sbjct: 60 AVLLTLTRWHRDSEMVVWFSSGMGLAGWIRPVLTFAIPVVAVIAVLSLFVTPWATNKGSE 119 Query: 134 LIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFTSITIDKKNKIIH 192 Q K + + + N + ++ + + Sbjct: 120 FRDQLKSRDELASISPGVFKESRNADRVFFVESFDELGNVVKNIFVQSVQHQRLGVVVAS 179 Query: 193 RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 + +A ++ + ++ Y+ + ++T + E+ + Sbjct: 180 QGHRTVADNGDNFLVMEHGRRYEGKPNTAEFSTTEFERYSIRIEPNEVKEEPPGTAALGS 239 Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 ++ + N +N + + IP+ + L+A +S +RS + + + Sbjct: 240 VELLKNHNPANNAEL-------QWRLAIPISAFLLVLLAIPLSFVDNRSGRSA-NMMLAL 291 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + +++I++++ G L PV + + L+I + ++ Sbjct: 292 LIYIIYNNMLSIVQAWLTQGKLNPVVGLWPVHVFFLLLTIWMFYRR 337 >gi|113868946|ref|YP_727435.1| permease [Ralstonia eutropha H16] gi|113527722|emb|CAJ94067.1| predicted permease [Ralstonia eutropha H16] Length = 375 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 116/355 (32%), Gaps = 10/355 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL + + T L + + + I M S + +L + Sbjct: 2 ILQQALRRELAYTAGAVFLVMLTFMLTSLVIRILG-MAASGKASPNDVLMLIGLATIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + ++V + SE+V+ + GIS+ +L+ P + + + +L+ Sbjct: 61 SILLSATLFISTLIVLTRWYKDSEMVVWFSAGISLRELVKPVLQFAAPFIVLALLLGMFA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSI 182 + +++ G +++ + +FI G + S Sbjct: 121 WPWANQQSALFRDRFEQRGVMSMIAAGRFIEPAKANYVLFIEGIDADMKHARNVFVANSE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + H+ + + V ++ Y ID + + + Sbjct: 181 ADKIGVALAHQGKFETMPNGDRLVVMENGRRYSGMPGQIDYRIVEF------ERYAVKVD 234 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 A S ++ K + + + + I +P++ +IA ++ R Sbjct: 235 NKAPESEAKLPPKSRDTIELIRNPTRENLGELIWRISLPILAFNFVMIAIPLAYVNPRLG 294 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +V + +I + +S+ +SG + A P+ L + L L+L + Sbjct: 295 RYTPLVF-AVLIYLTYSNLINLTQSWVRSGAIPFWLA-WWPIHLAVFLGALLLFR 347 >gi|239831521|ref|ZP_04679850.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] gi|239823788|gb|EEQ95356.1| permease YjgP/YjgQ family protein [Ochrobactrum intermedium LMG 3301] Length = 402 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 109/361 (30%), Gaps = 13/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L L A+ + + + + + + + ++ +P Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRID-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + ++ + + LV N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I + + L+ Sbjct: 180 DPALDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S+ ++ R + + + + L V +IA + + Sbjct: 240 DDFVIYAKDRPLSYLLNPDP---NDPILQTRPLRYKAELHRRLTQWLYPVVFAMIALAFA 296 Query: 296 --LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + I + ++Y V L+P + + Sbjct: 297 GDSRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDAGYIVLMYLVPAAVILVTGFA 355 Query: 354 I 354 + Sbjct: 356 L 356 >gi|183179747|ref|ZP_02957958.1| inner membrane protein YjgQ [Vibrio cholerae MZO-3] gi|183013158|gb|EDT88458.1| inner membrane protein YjgQ [Vibrio cholerae MZO-3] Length = 228 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 69/229 (30%), Gaps = 2/229 (0%) Query: 130 IGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK 189 + D+ G W + +N I + L ++W + + Sbjct: 1 MARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEQLYGLNLWRFDENKKLSTVIF 60 Query: 190 IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSF 249 L ++V + D + + S Sbjct: 61 SEQVDYVANNEWLMKDAVLTRLVN-DIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSL 119 Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 + + + ++ + R E + + P+ + M L+A S RS + Sbjct: 120 TGLSDYVHYLK-ASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGARIL 178 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 G+ +GF Y L P+ AL P ++ +++++ +L +K Sbjct: 179 SGVIAGFTFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGRK 227 >gi|261855831|ref|YP_003263114.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] gi|261836300|gb|ACX96067.1| permease YjgP/YjgQ family protein [Halothiobacillus neapolitanus c2] Length = 371 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 122/348 (35%), Gaps = 6/348 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP IL RY + TL L ++L+ + +L + S + Sbjct: 1 MP-ILNRYLLREASVATLGVTLI-VMLIMLANLLARSLSAAAEGSLPSSLIPAMMGFNAV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ ++P + + ++R SEL + RA G L + +I + + T + Sbjct: 59 KLLIYVLPVGLFIGLMFALGRMSRDSELTVLRACGYGPRHLSQAILWLAIPVSLLTASIS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +++ +I + + + +++ + + ++IG+K + I+ Sbjct: 119 LFAYPALQQVQSRMIDSARSQQVFNQLPVGRFIEEPSGKAVLYIGSKSGNGYSDIFAFNE 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + A + D + VV Q RI ++ Sbjct: 179 PTNTKNARQKPGVEMAPFGKLMTDSAGHRYVVLEQGRRIQGVAGEQDWSVIDYQTHEILV 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + E K SN+ + + +FY+ + L ++ + LIA ++ R Sbjct: 239 PGRADTENTQENKKSSLQLLHSNLPGD---QAEFYYRLSQALTVLVLALIAVPLAQAKPR 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 S + + + + + +I + ++ K G L + I Sbjct: 296 SGRYG-RLFWAFLLYALYFNLIALTENAIKHGELNLWQGLTLTHGTFI 342 >gi|153009928|ref|YP_001371143.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] gi|151561816|gb|ABS15314.1| permease YjgP/YjgQ family protein [Ochrobactrum anthropi ATCC 49188] Length = 402 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 109/361 (30%), Gaps = 13/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L L A+ + + + + + + + ++ +P Sbjct: 1 MRLIELYILRRVAIMFLAVLGAAVGITWTVQVLQRID-FLTTSGQTFQTIIQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + ++ + + LV N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAAVISVVSFLVAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVDPYARMNMRAMIANASADLMNVIVQEGNFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I + + L+ Sbjct: 180 DPSLDLIYYAADGAIASTPTGDMLLMQNGEVQRRDVSDGTVSIIKFNSYAFDLSQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S+ ++ R + + + + L V +IA + + Sbjct: 240 DDFVIYAKDRPLSYLLNPDP---NDPILQTRPLRYKAELHRRLTQWLYPVVFAMIALAFA 296 Query: 296 --LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R + I + ++Y V L+P + + Sbjct: 297 GDSRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDAGYIVVMYLVPAAVILVTGFA 355 Query: 354 I 354 + Sbjct: 356 L 356 >gi|269140438|ref|YP_003297139.1| putative permease [Edwardsiella tarda EIB202] gi|267986099|gb|ACY85928.1| putative permease [Edwardsiella tarda EIB202] gi|304560231|gb|ADM42895.1| Predicted permease [Edwardsiella tarda FL6-60] Length = 366 Score = 84.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ + L +++ F + I + + + L +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKMVRILGAVVN-GDIPTNLVFSLLGLGIPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ + + + G ++ + Sbjct: 61 QLILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMALAFITGALALVNAFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + + N + + +F+G K ++++ + Sbjct: 121 SPWSSLHSDEVMAEARANPGLASLAEGQFQPSQDGNYVLFVGNVKDKKFHNVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ L + + K+ +Y + ++ + S Sbjct: 181 GSQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRITDFVDYSAIIGHKSAM 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + +F++ + + ++ M L+ +S+ R + Sbjct: 241 LDPNNADQ-----ASMSALWHSQEPSFRAEFHWRLTLVFSVIVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G L P+ L + L++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNGGKDKLDPMIWMWGVNGLYLLLAVVL 345 >gi|148244955|ref|YP_001219649.1| permease [Candidatus Vesicomyosocius okutanii HA] gi|146326782|dbj|BAF61925.1| permease [Candidatus Vesicomyosocius okutanii HA] Length = 360 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 125/349 (35%), Gaps = 14/349 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K TL +L + + + + +G+ NY++ +P Sbjct: 1 MKILTLYIVKTMAFYTLIVMLVWIGVYSFFNFLDEVKFIGQY-NYTVFEATKYIILNIPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I L+ +++ NL TS+LVI R+ G+SI Q+ N V +++ +L+ Sbjct: 60 VMYSHSSVIILLGSLLALTNLASTSQLVIIRSSGVSIMQISNIVVWVALMFIAIIILIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + L + + ++ W++ + K + ++D T Sbjct: 120 LVAPITTEYAECLRSKALEQNMTCRNQQEFWLKDNG-----LFIHVKKDFDAKSFQDITF 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-------PIDKNSTTLNIPIKM 234 I + + +D A + ++L K + YQ + ++ I Sbjct: 175 IKLRAPGVLDSIIYSDNATFNGNNLELNKPIHYQLSKNGELTTFSKNYFEKYSVQISFNQ 234 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + S + + K+MSF +N E + Y ++P+ LVAM L + Sbjct: 235 KLIKNLKKDPRKLSTWHLYKQMSFL-TNNNLVADIVEIEIYKRFMMPVTLVAMILFSMLF 293 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 R + G+ I+ + +A IP Sbjct: 294 VFGSLRDASLGKKIFLGLMMSLFFELASRIIGVLSLTFNYNHFLSASIP 342 >gi|53803848|ref|YP_114530.1| hypothetical protein MCA2100 [Methylococcus capsulatus str. Bath] gi|53757609|gb|AAU91900.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 339 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/333 (10%), Positives = 98/333 (29%), Gaps = 9/333 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M +V I + E + L +V + + ++P + ++V + R Sbjct: 1 MTIVVSRKFLAILARAIE-GEVATDTIFTLLGLKVVVTLASLLPASVFLSVLMVLGRMYR 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 +E+ + G+ ++ ++ + + + + E++ +LI + + D Sbjct: 60 DNEMTVFACAGVGPLRIYRSILLFAGPVCVLGAFLSLQAMPWSERLSQELISKDEKGADV 119 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 + + + S ++ + + I ++ + Sbjct: 120 RGIKAGRFNEFSQGDVVLYAEQLNTDKTMSRVFAQSRRGDETGIVIAESGHMEINDAGDH 179 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI 264 V L YQ D S + ++ + S + Sbjct: 180 FVVLNNGRRYQGVPGRADFVLNEFQAYG-------VRINPPEGSQAALKREAADSLHLWM 232 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 R + + +PL +TL+A ++ R + + + I Sbjct: 233 SGRPRELAELQRRLAVPLGTFTLTLLAVPIARTSPR-GGVWGNLISAFLIYIIYENLQKI 291 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +G L + + + + ++L + Sbjct: 292 SQGLLATGKLSVWTSYAGIYAVMLLATSVLLAR 324 >gi|157829030|ref|YP_001495272.1| hypothetical protein A1G_06555 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933754|ref|YP_001650543.1| hypothetical protein RrIowa_1403 [Rickettsia rickettsii str. Iowa] gi|157801511|gb|ABV76764.1| hypothetical protein A1G_06555 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908841|gb|ABY73137.1| hypothetical membrane spanning protein [Rickettsia rickettsii str. Iowa] Length = 362 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 145/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S L ++P + Sbjct: 5 KTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIY-VPFSFFLRLILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I+T G + L + + S S + I + I + T Sbjct: 124 ISTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDETQIIQTQFINVAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLSRVKVFT-KEETKAYNNLTMQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + + +Y + P+M++A ++A+ R Sbjct: 243 FIRPEMVSIWALPKLINELLNSGLPAIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 DNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLH 358 >gi|238921310|ref|YP_002934825.1| hypothetical protein NT01EI_3454 [Edwardsiella ictaluri 93-146] gi|238870879|gb|ACR70590.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 366 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ + L +++ F + I + + + L +P + Sbjct: 2 IIIRYLVRETVKSQVAILFILLLIFFCQKMVRILGAVVN-GDIPTNLVFSLLGLGIPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V + + G ++ + Sbjct: 61 QLILPLSLFLGLLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLAFITGALALVNAFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + + N + + +F+G K +++ + Sbjct: 121 SPWSSLHSDEVMAEARANPGLASLAEGQFQSSQDGNYVLFVGNVKDKKFQNVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ L + + K+ +Y + ++ + S Sbjct: 181 GSQRPSVVVADSGHLVEMKDGAQKVVLDSGTRYEGTAMLRDFRITDFVDYSAIIGHKSAM 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + +F++ + + ++ M L+ +S+ R + Sbjct: 241 LDPNNADQ-----ASMEALWHSQEPSFRAEFHWRLTLVFSVIVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G L P+ + L++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNGGKDKLDPMIWMWAVNGFYLLLAVVL 345 >gi|159043739|ref|YP_001532533.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] gi|157911499|gb|ABV92932.1| permease YjgP/YjgQ family protein [Dinoroseobacter shibae DFL 12] Length = 380 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 108/346 (31%), Gaps = 12/346 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M RY + T +F L +++ ++ + ++ ++ A L+ +P Sbjct: 1 MLARYDRYILGRLMVTFGFFTLIIVLIYWINRSIRLFERLSG-DGQGLALFAQLSLLSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +I ++P + + SE V +A GIS ++++ P + ++ +L+ Sbjct: 60 YLIYLMLPLAAFASAVSTGNRMGSDSETVALQAAGISAFRIVRPALYMGVMAAALMLLLA 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + DL +Q D + + + + + + Sbjct: 120 HLLVPMSRVAIADLEEQLADEVSARLLEPGKFQSPIDGVTVFVAEITGEGVLSKVLLSDQ 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVK---LKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ ++ + V L + + + L + Sbjct: 180 RDPAEEVIYTANQALLVRSDTGPQLVMISGLAQFLRADGTLSTLQFEDFALGLGEVEVPE 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VS 295 + +++ +S ++ + + P + ++ L+ S + Sbjct: 240 DRVLRDLRGWDTARLLRADPADLESVGKSRGAFLSEAHRRLANPALAISTALLGFSALLV 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 FSR VA I + ++ + + + +S AA Sbjct: 300 GGFSRFG-FWQQVAGAILALIVIQLSVNMSEEIAQSDA-----AAW 339 >gi|319944264|ref|ZP_08018540.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] gi|319742559|gb|EFV94970.1| permease YjgP/YjgQ family protein [Lautropia mirabilis ATCC 51599] Length = 369 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 105/344 (30%), Gaps = 16/344 (4%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 ++ L N+ S S L A I ++ + ++V Sbjct: 17 VMFATLFTILVTTSLIRFLNRATSDRIAS-SDILPLIAFNAIGFIPVLLVLTVFLSVLMV 75 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 R SE+VI A G S+ + P ++ + V ++ + +L +++ Sbjct: 76 LARAWRDSEMVIWFASGQSLTAWIRPVMMFVLPYAAVVAAVTFVLSPWANQQIAELRERF 135 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHR-KDAD 197 D + + ++ + F+ + + + R Sbjct: 136 NQREDVSMVAPGQFRESTSSNRVFFVESMSPDKSTVSNVFVVQHNGPRMVVVASRGGHVK 195 Query: 198 LAIIYNDKVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKFSEQFASRSFYEIIK 254 + + + L+ Y + + + E + ++++ Sbjct: 196 IEENGDRFLVLEDGRRYDGTWGTPEYSLMEFLRYGVRLDPKPVNTQIESVRGMATPDLMQ 255 Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 + A + + + +P+ + + L+A +S R + + G+ Sbjct: 256 ----------LSSPAARGELAYRVGLPISVFVIALLAIPLSFVNPRLGS-SVNLVIGVLI 304 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 F + ++++S+ L + L + L++ + ++ Sbjct: 305 YFTYSNLNSVVRSWITQEKLSFGVGVWLTHALVLGLALYMFRKR 348 >gi|291279034|ref|YP_003495869.1| hypothetical protein DEFDS_0632 [Deferribacter desulfuricans SSM1] gi|290753736|dbj|BAI80113.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 360 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 133/363 (36%), Gaps = 7/363 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +Y K YL + + L+ +I+ + + + N + ++P Sbjct: 1 MKKFNKYLIKSYLNSLVAILIFILIIYTFFQVVQHTKYISRY-NTPFLNILIYDLMKIPY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I Q+ P T +V L + +EL+ + G + Q+ F+ + L + + + Sbjct: 60 SIYQVFPVATSAAIVVTMLKLIKNNELIAYLSFGGRLRQIAVLFLSVNFLFFLILLYYSD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I EKI + ++ ++ + ++ I I + ++ T Sbjct: 120 AINPKIEKIRAKYKDEKIF--FQKHTEKLTVTDFYFKDKESIISIDLINFDKKEFDGVTI 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 DK I ++ + N+ + + + + + L I + Sbjct: 178 YEKDKDTISIVKRAKKAKYLGNNIWEFQDFKIFDVKKIPTLLKIYDKYKLKSKILTKFIK 237 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ SF E+ + + +Y I +PL+L+ +T++ +++ Sbjct: 238 IKPDEPKKLSFKELSRVIKVYESKG-LSAESFRLIYYNKIAVPLILIVLTILLLPLTITI 296 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 SRS Q + A + + + ++ S GK+G++ P A IL ++ILL K Sbjct: 297 SRSYQYIKVAAKSLSVTIIFWVSYSVFYSLGKNGVINPFLANFSLHILFFIFGMIILLSK 356 Query: 359 EDG 361 E G Sbjct: 357 ERG 359 >gi|85716329|ref|ZP_01047302.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] gi|85696845|gb|EAQ34730.1| permease YjgP/YjgQ [Nitrobacter sp. Nb-311A] Length = 390 Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 120/360 (33%), Gaps = 14/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + RY F+ L + + L+ ++++ + + +I + + +P+ Sbjct: 1 MGSIDRYIFRTTLASFVVVLVSLTGVIWITQALRGID-LMTSQGQTILTFLGITSLAIPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S ++L PF+ ++++ + + Sbjct: 60 LVLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVIVALLVAFIAA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A G + + + + + ++ I ++ P + F Sbjct: 120 YLAPDGMRRLKRWDAEITADVLANVLQPGRF---AQLDPNLTIRIRERQPGGQLAGIFID 176 Query: 182 ITIDKKNKIIHRKDADLAIIYND-------KVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + ++ D + + L++ + + + ++ Sbjct: 177 DRRNSDERLSIIADHGTVMKNDKGSFLVLEDGHLERFETGKREPAMVAFDRYAFDMSKFS 236 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + R +E+I ++ + + + P+ + + Sbjct: 237 NRGHDVVYGIRERYLWELIVP-DQNDPVVQQLQGQFRAELHDRFTAPIYPFVFAALTFAF 295 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L R+ + + G ++ + + + P+AA L ++L ++ I + Sbjct: 296 -LGTPRTTRQSRNFSMGAAIA-AVFGLRMAGFALSVMTVKSPLAALLQYLLLFGAIGISL 353 >gi|144897578|emb|CAM74442.1| conserved hypothetical protein, membrane [Magnetospirillum gryphiswaldense MSR-1] Length = 373 Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 115/361 (31%), Gaps = 11/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M GI RYF + L+ ++++ + + S++ L +P Sbjct: 1 MTGI-TRYFLRQLAVGMLFVSAALTCVLWLTQSLRLIEMIVN-QGISVTTFLKLTGMLMP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IIP V + + LN ELV+ RA G+S W L P ++ + + I ++ Sbjct: 59 SFLVVIIPIALFAVILFTYNKLNTDRELVVLRAAGLSNWALAKPALILAGIATIMGYVLS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + ++ +++ + + + Sbjct: 119 VWIIPQTVQNFREVQWSIRNDISNLLLQEGTFNKFGKGVTIYVRTRTSEGELLGLLVHDK 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKMDG 236 + + + + + ++ +S T+++ + Sbjct: 179 RSPTKPVTLMAEKGALVFTETGPRILMVNGNRQQLPDGTGQLSVLNFDSYTVDLSMSGGD 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--V 294 S E++ + + + RA+ + + + PL + TLIA + + Sbjct: 239 NGSRFRDARELSMAELLN--ADEAQMGVTDYRRAKGELHQRLTSPLYSLGYTLIALATLL 296 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + F R Q + + I + + + + S + ++ V+ + + Sbjct: 297 TAGFDRRGQT-VTILTAIGLMVGVQAAVLGLANLSASKPIFLPFLYVLAVLPLVLGPWWL 355 Query: 355 L 355 L Sbjct: 356 L 356 >gi|301156462|emb|CBW15933.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1] Length = 363 Score = 84.4 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + L +P + Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFSQQLVRVLGSAAN-GKVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+ + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVALILSLFTAGLAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ K N +M SN +FI + ++ Sbjct: 121 SPWAIQKQAAIVEDAKANPTMGALASGQFMSTSNNNFVLFIDKINGNQISDVYLFQMKAK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K ++ + +L + N +V+ Q + D +Q + Sbjct: 181 GQTKPSVVTAEKGELKALPNG----DQVLNLQNTLRVEGTSVLPDFRITHFDDYQAYLGH 236 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + ++SF A+ + ++ I + L + M LIA +S R + Sbjct: 237 QETNSESDEAAELSFEQLLKDKSAA-AKAELHWRITLILAVPLMALIAVPMSKVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + KS G + L + I + L I++ Sbjct: 296 FAK-ILPALLLYLIYFLLQSSFKSAGGADKLDAGLLMPLVNIAFLILGIVL 345 >gi|206577932|ref|YP_002240777.1| putative permease [Klebsiella pneumoniae 342] gi|206566990|gb|ACI08766.1| putative permease [Klebsiella pneumoniae 342] Length = 365 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 121/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L +P + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGIPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ G + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q S+ +FI + + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ +L+ + + ++ + ++ + + Sbjct: 181 GNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVT 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ H RA + ++ + + M L+ +S+ R + Sbjct: 241 SDPDDTEQM-----DMRTLWQTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G + +L +L++L+ Sbjct: 296 V-LSMLPAMLLYLVFFLLQTSIKSNGGKGKMDLAIWMWAINLLYFALAVLL 345 >gi|206602447|gb|EDZ38928.1| Putative permease, YjgP/YjgQ family [Leptospirillum sp. Group II '5-way CG'] Length = 378 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 102/355 (28%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY F L + LL ++L+ + + SI L P Sbjct: 1 MKIIHRYLFLELLPPFVIGLLVLVVLILTQQTL-MIMNLLVNKGLSIPTVLRLVMMIFPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IIP L + F L E+ +A GI + +LL P V+ + L + + + Sbjct: 60 FLTMIIPVSVLAASTATFNRLASDGEITALKASGIGLSRLLWPLVLFAFLGYVGSFYMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++I + + ++ Sbjct: 120 KAEETQGMSLQEMISTVLKKKMSLGIRPQVFNNFMDRFVIYVDRMPTFSRMQGVFIYQEG 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I+ R+ + L ++ + + + + Sbjct: 180 KGKSPSTVIMAREGSLLNEENGRPGIRIQLRSGTLLQGGAAQQFVRFSSYDLTIFGKSAG 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S + E+ KK+ S R Y P + + + RS Sbjct: 240 ATEKSPTIQELEKKIGRS-SKPDVSLLRELEDRYKNYTYPFSCLIFAFLGIPFGIYAKRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + V F Y + T+ +L P A+LIP + ++ +L+ Sbjct: 299 GKLAGFVFATASVIF-FYILNTVDDLMVARRLLKPFVASLIPDLALGAVMGFLLI 352 >gi|145300687|ref|YP_001143528.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853459|gb|ABO91780.1| predicted permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 370 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 115/347 (33%), Gaps = 6/347 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I++RY F+ LKT L L +++ +I + + L + Sbjct: 1 MTVIVFRYLFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAAD-GEVPTRLVSTLLLLNLS 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P + + L SE+ + A+G S ++ +V ++L Sbjct: 60 NMALLMLPISLFLAILFAHGRLYAESEMTVLHAVGFSHRFVMRCAMVLALLTAAVAAFNT 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 IA ++ +I ++K + +M++ + +++ + + + Sbjct: 120 GWIAPQAKEREYQVIDEFKADPGISFLQAGRFMELDK--GRLVAYIQELNDKASLLQKIF 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + K A ++ D L+ + R ++ I + Sbjct: 178 VLQRSHDGKPPSVVVATEGVVTLDSNGLQWLTLKDGSRYEGHFSTRQFQISEFDEYSLVI 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +Q RS + + + + + I +PL ++ +T + ++ R Sbjct: 238 RQQEMERSNRK--AAARPTVDLLGTQDNGMMAELQWRISLPLSILVLTFLVVPLARVNPR 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 + + I + +++ +S SG L + ++ Sbjct: 296 QGRYAK-LLPAILLYLSYFLLLSAARSAIDSGRLPHWPGMFLVPLVY 341 >gi|254488881|ref|ZP_05102086.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] gi|214045750|gb|EEB86388.1| permease YjgP/YjgQ family protein [Roseobacter sp. GAI101] Length = 376 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 113/366 (30%), Gaps = 14/366 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M RY +L +F L + + ++ + +++ + +P Sbjct: 1 MSK-FDRYMLSQFLTLFSFFALVLVAIFWINRAVILFDRLIG-DGQTALVFLEFTVLGLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +I ++P T V + SEL + +A G W+L P I + + ++ Sbjct: 59 RLITTVLPIATFAGAAYVINRMTSESELTVLQATGTGPWRLARPVFAYGICVALMMSVLT 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK------ILPENH 174 + + + + N + ++ ++ + + Sbjct: 119 HVLVPMTKAELNQREAEISQNVTARLLTEGTFLHPTSKVTFYTRLIGNDGVLRDVFLSDR 178 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 D I + ++ + I+ + + +V Q + +I + Sbjct: 179 RNPDEGVIYTAAEAYLVRNGNGTTLIMVDGLAQRLQVEGKQL--ATAKFRDFSFDISALV 236 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS- 293 S+ S ++++K + + PL + +I + Sbjct: 237 SNSTDESQSIDSMVTFDLLKNWDDLAAKTGQTHGDIAEEVNARFADPLFCIIAAMIGYAT 296 Query: 294 -VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + FSR R IV + T++++ + PV +P ++ L + Sbjct: 297 LIMGGFSRFGVWREIVIAFGLLIAIDGFSSTLVETVRQDASRWPVL--YVPSLVGAMLVL 354 Query: 353 LILLQK 358 ++ Q Sbjct: 355 AMIWQT 360 >gi|16767724|ref|NP_463339.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991268|ref|ZP_02572367.1| putative permease [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|16423044|gb|AAL23298.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205330408|gb|EDZ17172.1| putative permease [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261249567|emb|CBG27434.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996823|gb|ACY91708.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160963|emb|CBW20497.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915575|dbj|BAJ39549.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323132816|gb|ADX20246.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991288|gb|AEF10271.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 366 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + K N + Q +N +FI + + ++ Sbjct: 121 GPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGNSVLFIESVDGSDFHDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L PV ++ ++L+I + Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLALAIGL 345 >gi|315634608|ref|ZP_07889892.1| inner membrane protein YjgP [Aggregatibacter segnis ATCC 33393] gi|315476556|gb|EFU67304.1| inner membrane protein YjgP [Aggregatibacter segnis ATCC 33393] Length = 364 Score = 84.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 122/356 (34%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + L +P + Sbjct: 2 ILTRYLTKEVFKSQIAILFILLLIFFCQQLVRVLGSAAN-GQVPADLVFSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ L SE+ + RA G+ L+ ++ S+ G + Sbjct: 61 QLMLPLCLFIAILLTLGRLYAESEITVMRACGVGSKILVKVVLILSLFTGALAAYNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +I++ K N + +M +N +FI + N+++ T Sbjct: 121 SPWAINKQVAIIEEAKANPNMGALSAGQFMTANNSDFVLFIDDIQENQINNVYVFQTQPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLK-----KVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 K +I + +L + N L+ + + + + Sbjct: 181 GQTKPSVIVAEQGELKSLPNGDQILRLQNSDRFEGTAILPDFRITHFDEYQAYLGHKAVE 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + S +++ +T+F++ + + L + M L+A +S Sbjct: 241 DDSNEAGEMSLMQLLN----------ADTPAMKTEFHWRLTLILAVPIMALLAVPLSRVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + V + + + + + +KS G +G L + L+IL+ Sbjct: 291 PRQGRFAK-VLPALLLYLIYFLLQSSLKSAGGAGKLDASLFMPLVNGGFFLLAILL 345 >gi|226357375|ref|YP_002787115.1| membrane protein; permease [Deinococcus deserti VCD115] gi|226319365|gb|ACO47361.1| putative membrane protein; putative permease [Deinococcus deserti VCD115] Length = 347 Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 99/358 (27%), Gaps = 12/358 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP IL R+ + L+ + L L+ ++ + + + +P Sbjct: 1 MPSILTRFVLREVLRWYAAGAALFLTLQMTDVLSTTVAKLLTY-DPPLWKAVAAFGAILP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ + + ++ F + R SE A G+ L+ P + ++G+ Sbjct: 60 TILNRTLVLAVPFAILLAFSRMQRDSEFKAILAAGVRPLSLVWPLLAPFAVVGLIAGYNA 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +G K + + + + + Sbjct: 120 GTLVPAGLKQWDRAWYRIYEQTPPPPTQEHYTFAPAGALYYASRIVNAKGGDRAELTGVM 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ + + L+ + G+ P K + + D Q Sbjct: 180 VQRGEE----TLTATSGVWDAKARTWTLQNAWVVRPGQPPRQKTGALV--LPQRDTLQPP 233 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S ++ + + Y L V + A + Sbjct: 234 PAEGKQLSNAQLRAGLKRE-----LSPAQRRDYQYQLATRVADPVTPVVFALAAGALGLL 288 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 A + Y + + ++G + P AA +P + + L+ ++ + Sbjct: 289 IRSRATAFAAVLVFIASFYILWSTAPQLARAGAMDPALAAWLPNLTFLLLAGVLAWRL 346 >gi|83312813|ref|YP_423077.1| permease [Magnetospirillum magneticum AMB-1] gi|82947654|dbj|BAE52518.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 368 Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 104/353 (29%), Gaps = 11/353 (3%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + L ++ ++++ + SI L +P + IIP Sbjct: 3 RQMLVGMIFVSAALACVLWLTQSLRFVEMIVNK-GLSIGAFLKLTILLMPGFLVVIIPIS 61 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 V + + L ELV+ RA G+S L P V+ + + ++ I + Sbjct: 62 LFAVVLFTYNRLIADRELVVLRAAGLSHLALARPAVILGLAVSAVGYMLSCWIIPVTVRS 121 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 ++ +++ + + + + Sbjct: 122 FHEMQWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHDKRHAQRPVTLM 181 Query: 191 IHRKDADLAIIYNDKVKL----KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 R + + ++V + ++ T++ Sbjct: 182 AERGALVYTEQGPRVLMVNGNRQEVTPGTGKLSLLYFDNYTVDFNTATGAKHDRVRDARE 241 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSLEFSRSNQP 304 RS E++ S R +++ + + PL + L+AA+ ++ F R Q Sbjct: 242 RSTLELLAIDSSMENKGEL--RRFKSELHSRLTSPLYSLGFPLLAAAVLLTSGFDRRGQT 299 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + + SG L V I L I+L + +L + Sbjct: 300 AQ-VITATALMVAVQALALGASNLS-SGNLAFVPLIYINAALPIALGLWVLAR 350 >gi|168464639|ref|ZP_02698542.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632768|gb|EDX51222.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 366 Score = 84.0 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKTVLVKAAMVLALFTGILAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + K N + Q +N +FI + + ++ Sbjct: 121 GPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L PV ++ ++L+I + Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLALAIGL 345 >gi|317046771|ref|YP_004114419.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] gi|316948388|gb|ADU67863.1| permease YjgP/YjgQ family protein [Pantoea sp. At-9b] Length = 396 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 38/351 (10%), Positives = 113/351 (32%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 32 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLTLLGLGVPEMA 90 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ +L I + + + Sbjct: 91 QLILPLSLFLAILMTLGRLYTESEITVMHACGLGKSVLVKSAMILMLLTSIVAAINVIWL 150 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ Q K N + S+ +F+ + +++ Sbjct: 151 GPWSSRYQDEVTQNAKANPGAAALAAGQFQTSSDGNAVLFVEDVRGNTFGNVFLAQLRPK 210 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + ++ + ++ + Sbjct: 211 GNARPSVVLADSGHMEQRPDGSQIVTLDKGTRFEGTAMLRDFRITDFVDYKALIGYKQAV 270 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + ++ + + + + ++ M L+ +S+ R + Sbjct: 271 -----LDPNDAEQADMRSLWQSNDPTFTAELNWRLTLVFSVLIMALMVVPLSVVNPRQGR 325 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + +KS G P + ++L++ + Sbjct: 326 V-LSMLPAMLLYLIFFLLQSSLKSNSAKGKFDPTLWMWVVNFAYLALAVGL 375 >gi|16763279|ref|NP_458896.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144758|ref|NP_808100.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62182905|ref|YP_219322.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161617773|ref|YP_001591738.1| hypothetical protein SPAB_05636 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551265|ref|ZP_02345020.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168232819|ref|ZP_02657877.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168234609|ref|ZP_02659667.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244032|ref|ZP_02668964.1| putative permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262478|ref|ZP_02684451.1| putative permease [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168821096|ref|ZP_02833096.1| putative permease [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445077|ref|YP_002043718.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450320|ref|YP_002048502.1| permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468992|ref|ZP_03074976.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736994|ref|YP_002117399.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250300|ref|YP_002149398.1| putative permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262941|ref|ZP_03163015.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242439|ref|YP_002218342.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386849|ref|ZP_03213461.1| putative permease [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927295|ref|ZP_03218497.1| putative permease [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205355210|ref|YP_002229011.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859604|ref|YP_002246255.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213022334|ref|ZP_03336781.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213427635|ref|ZP_03360385.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618569|ref|ZP_03372395.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650368|ref|ZP_03380421.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238910634|ref|ZP_04654471.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824526|ref|ZP_06544085.1| putative permease [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25309681|pir||AF1061 probable inner membrane protein STY4817 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505587|emb|CAD06939.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140397|gb|AAO71960.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62130538|gb|AAX68241.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161367137|gb|ABX70905.1| hypothetical protein SPAB_05636 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403740|gb|ACF63962.1| putative permease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408624|gb|ACF68843.1| putative permease, YjgP/YjgQ family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455356|gb|EDX44195.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712496|gb|ACF91717.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197214003|gb|ACH51400.1| putative permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241196|gb|EDY23816.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291917|gb|EDY31267.1| putative permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936955|gb|ACH74288.1| putative permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603947|gb|EDZ02492.1| putative permease [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323960|gb|EDZ09155.1| putative permease [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274991|emb|CAR40065.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323849|gb|EDZ11688.1| putative permease [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205332944|gb|EDZ19708.1| putative permease [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337037|gb|EDZ23801.1| putative permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342368|gb|EDZ29132.1| putative permease [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348722|gb|EDZ35353.1| putative permease [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206711407|emb|CAR35786.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088910|emb|CBY98668.1| Lipopolysaccharide export system permease protein lptF [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615642|gb|EFY12562.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618702|gb|EFY15591.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322621885|gb|EFY18735.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627610|gb|EFY24401.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630916|gb|EFY27680.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637865|gb|EFY34566.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642323|gb|EFY38929.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322643902|gb|EFY40450.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651022|gb|EFY47407.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656725|gb|EFY53013.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659851|gb|EFY56094.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661938|gb|EFY58154.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666314|gb|EFY62492.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672733|gb|EFY68844.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676163|gb|EFY72234.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680647|gb|EFY76685.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684459|gb|EFY80463.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322717408|gb|EFZ08979.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323194204|gb|EFZ79401.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197349|gb|EFZ82489.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201533|gb|EFZ86597.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206047|gb|EFZ91009.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213058|gb|EFZ97860.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215429|gb|EGA00173.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219413|gb|EGA03898.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227717|gb|EGA11871.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228887|gb|EGA13016.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236501|gb|EGA20577.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239998|gb|EGA24045.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241955|gb|EGA25984.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247896|gb|EGA31833.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251466|gb|EGA35337.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258168|gb|EGA41845.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263686|gb|EGA47207.1| putative permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265718|gb|EGA49214.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270162|gb|EGA53610.1| lipopolysaccharide ABC transporter permease LptF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326630368|gb|EGE36711.1| putative permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 366 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + K N + Q +N +FI + + ++ Sbjct: 121 GPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L PV ++ ++L+I + Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLALAIGL 345 >gi|126031980|gb|ABN71556.1| putative permease [uncultured bacterium] Length = 402 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 123/359 (34%), Gaps = 7/359 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY F+ L + A L+ + + ++ + + +S + A +P Sbjct: 8 DRYIFRLVAMPMLAVFVIAASLLVLDKMLKLFDFVATEGG-PVSVVFRMLANLLPEYASL 66 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP ++ + F L +SEL + RA+G+ +LL + ++ L ++++ + Sbjct: 67 AIPIGLMLGILFAFRKLATSSELDVMRAVGLGYGRLLRVPFIMAVGLAGVNLVIVGYLQP 126 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 L + + + + + + ++ + + Sbjct: 127 LSRYYYEQLQFELRSGALGASIKVGEFTTLKDKIALRIERSEDEGRKLMGIFVRVADDQG 186 Query: 186 KKNKIIHRKDADLAIIYNDKVKLK-----KVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + R+ LA+ N + ++V+ G P + ++PI + ++F Sbjct: 187 QVLSVSAREGRFLALKDNPDTIVFRLSDGQIVQDSPGVTPRVLTFSRHDLPIDLPALERF 246 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP-LMLVAMTLIAASVSLEFS 299 ++ Y + + + + R + F + ++++ + + A Sbjct: 247 RQRGGGEREYLLPELLRLGWNDEVPLTQRNINRANFNYRMVEVVMMLLLPLLAVALAVPP 306 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + V I + + +S G + A P ++ ++ + + + Sbjct: 307 KRSTSALGVFVSIVMVVAYHKVNEYGQSIAALGKSGVLLALWGPFVVFAAMIVWMYWRL 365 >gi|124514758|gb|EAY56270.1| putative permease, YjgP/YjgQ family [Leptospirillum rubarum] Length = 378 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 101/355 (28%), Gaps = 3/355 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY F L + LL ++L+ + + SI L P Sbjct: 1 MKIIHRYLFVELLPPFVIGLLVLVVLILTQQTL-MIMNLLVNKGLSIPTVLRLVMMIFPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IIP L + F L E+ +A GI + +LL P V+ + L + + + Sbjct: 60 FLTMIIPVSVLAASTATFNRLASDGEITALKASGIGLSRLLWPLVLFAFLGYVGSFYMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++I + + ++ Sbjct: 120 KAEETQGMSLQEMISTVLKKKMSLGIRPQVFNNFMDRFVIYVDRMPTFSRMQGVFIYQEG 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I+ R+ + L ++ + + + + Sbjct: 180 KGKSPSTVIMAREGSLLNEENGRPGIRIQLRSGTLLQGGAAQQFVRFSSYDLTIFGKSAG 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + E+ K++ + R Y P + + + RS Sbjct: 240 TTAKPPTIRELENKIA-GSPKPDVSLLRELEDRYKNYTYPFSCLIFAFLGIPFGIYAKRS 298 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + V F Y + T+ +L P A+LIP + ++ +L+ Sbjct: 299 GKLAGFVFATASVIF-FYILNTVDDLLVARRLLKPFVASLIPDLALGTVMGFLLI 352 >gi|110680306|ref|YP_683313.1| hypothetical protein RD1_3119 [Roseobacter denitrificans OCh 114] gi|109456422|gb|ABG32627.1| membrane protein, putative [Roseobacter denitrificans OCh 114] Length = 375 Score = 83.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 111/358 (31%), Gaps = 9/358 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY L +F L + ++++ + +++ S A +P +I Sbjct: 4 LDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELIS-DGQSALVFLEFTALGLPKLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P T + V +N SEL + +A G +L P +V +++ + ++ + + Sbjct: 63 TVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHVLM 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW----EDFT 180 ++ + N + ++ S ++ Sbjct: 123 PLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQEIDDDGVLRDVFLSDRRSVE 182 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 I +D + + +++ + + +I + Sbjct: 183 EGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDVSQ 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFS 299 + ++++ ++ + F+ I PL + LI S + + Sbjct: 243 RLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIGGF 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSG-ILLPVAAALIPVILTISLSILILL 356 V + + + ++S + L P+ +P ++ L I +L Sbjct: 303 SRFGVWREVGVAFVLLVAIDGLRSTLQSPVRRDPELWPLL--YLPTFISALLVIAMLW 358 >gi|163792838|ref|ZP_02186814.1| Predicted permease [alpha proteobacterium BAL199] gi|159181484|gb|EDP65996.1| Predicted permease [alpha proteobacterium BAL199] Length = 369 Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 122/361 (33%), Gaps = 23/361 (6%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY L ++ ++ ++++ + + I L +P + Sbjct: 3 ITRYLAGQILTAMVFIVVSMTCVIWLSQSLRFVDLIVNR-GLPIPSFVYLTLMLMPTWLS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + V+ L ELV+ A G+S +L P +V ++ + T L+ + Sbjct: 62 IVLPIAAFAATVFVYNKLTNDRELVVLSAAGLSPLRLAGPAMVVAVATMLATYLMTLYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWED 178 + +L Q + N D + + + ++ I+ + Sbjct: 122 PMSYRGFKELQFQIRHNFDHLVLREGEFRSIGDGLTVYVRAREDTGQLAGIVVHDQSNAK 181 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 T + ++ +I + ++ N + + V + + T+++ + Q Sbjct: 182 KTVTLVAERGALITAPEGPRVVMANGSRQERDVE--TGRVSVLYFDRYTIDLGAMREEVQ 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE- 297 + +++ ++ + + + + PL+ +++T I +V L Sbjct: 240 RTIRDQNELFIDDLLHPTEQ--ITDPKNFDEYIAEGHQRLTSPLLALSLTAIGVAVLLSG 297 Query: 298 -FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL----LPVAAALIPVILTISLSI 352 FSR Q I+ + +G G ++ V VI+ L++ Sbjct: 298 EFSRRGQTIRIITAVLLAGCAE------AMGLGSKYLVVRYPSMVPIMWFAVIVPFLLAL 351 Query: 353 L 353 Sbjct: 352 A 352 >gi|254669827|emb|CBA04201.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 210 Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 68/199 (34%), Gaps = 4/199 (2%) Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 A K P++ + DK + + + +LK + G ++ Sbjct: 11 CWALKSGPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEV 70 Query: 224 N---STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 + I +K + + S E+ + ++N + ++ +V Sbjct: 71 SIAAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVY 129 Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 P M L+A + + + +R + + GI G + + + + P A Sbjct: 130 PAAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAG 189 Query: 341 LIPVILTISLSILILLQKE 359 +P I L++ ++ ++E Sbjct: 190 ALPTIAFALLAVWLIRKQE 208 >gi|161505034|ref|YP_001572145.1| hypothetical protein SARI_03165 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866381|gb|ABX23004.1| hypothetical protein SARI_03165 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 366 Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + K N + Q +N +FI + + ++ Sbjct: 121 GPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDSDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L PV ++ ++L+I + Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWTVNLIYLALAIGL 345 >gi|209885016|ref|YP_002288873.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] gi|209873212|gb|ACI93008.1| permease YjgP/YjgQ [Oligotropha carboxidovorans OM5] Length = 385 Score = 83.6 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 110/365 (30%), Gaps = 15/365 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G + Y + L + L L+ +++V + + ++ + +P Sbjct: 1 MLGSIDAYVVRSTLLSFLIVLISLTGVIWVTQALRGID-LMTAQGQTVLVFLGITGLAIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I P L+ L SE+++ A G+S W+ L PF+ ++++ + Sbjct: 60 VLALIIAPLAILLAVTHTLNRLATDSEIIVMNAAGLSPWRFLRPFMYSTVIVACLISFLA 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + + + ++++ + + +D Sbjct: 120 VFLAPECLRALRRWHTEIGADVLANVLQPGQFIRLDKLVLRVQERRPGGVLVGVFIDDQR 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMD 235 + I + + L ++ D S ++ Sbjct: 180 NPAERIN--ITAQNGVVQKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQ 237 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q ++ R E+I + + + + ++ L ++A + Sbjct: 238 APQTYNYNARERFISELISPPKDDQVA-QRSLGQFRAELHDRLLAGLYPFVFVILAFAF- 295 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLY--TIITIMKSFGKSGILLPVAAA-LIPVILTISLSI 352 L R+ + A + +L + S A ++ +LS Sbjct: 296 LGPPRTTRQGRNFAISMLILVVLVVRIGGYACSTIAVSQ--PAAIAVQYAMLLAVAALSG 353 Query: 353 LILLQ 357 ++++ Sbjct: 354 WMIVK 358 >gi|221211523|ref|ZP_03584502.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221168884|gb|EEE01352.1| putative membrane protein [Burkholderia multivorans CGD1] Length = 326 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 97/325 (29%), Gaps = 26/325 (8%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +YF + T ++ L L F DL N +G NY + A + P Sbjct: 1 MRLYEKYFARQIYVTFIFILFAFSGLFFFFDLISELNSVGH-GNYKFGYAVLRVALQTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +IIP L+ I VF + SE I R G++ Q L + + L I T L+ Sbjct: 60 RFYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLLKIGVPLVIVTYLIGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI------SNPQQDIFIGAKKILPENHI 175 + +++ + Q W++ + Q F+ + P++ I Sbjct: 120 FVGPYADQLSERVRLQALGASVSSNFQSGVWVKDTLAARENGEQVTRFVNVGSLAPDSTI 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------------------YG 217 K R LK V E + Y Sbjct: 180 SNVRIYEFDAKFQLKNVRIAQTGRYEPPGHWLLKGVTETELTPIQPIAGQAPDALNPVYR 239 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + L + S + + + N R + + Sbjct: 240 SQQVSLPEYRLRSDLTPQILSVLLVSPERMSIINLFRYIQHLR-ENHQDTQRYDIALWRK 298 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSN 302 ++ P + M +++ + +R+ Sbjct: 299 LLYPFAVFVMLVLSLPFAYLHTRAG 323 >gi|254455252|ref|ZP_05068681.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082254|gb|EDZ59680.1| conserved hypothetical protein [Candidatus Pelagibacter sp. HTCC7211] Length = 325 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 117/322 (36%), Gaps = 2/322 (0%) Query: 39 QMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISI 98 + + S L+ P +I +++PFI L+ + F L +E+ I + G+ Sbjct: 5 EFFKEIEVSSGFPIFLSLLNSPSMIFEMLPFIFLITTQLFFIKLFNNNEIEIFKYSGLKN 64 Query: 99 WQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP 158 +L F + I GI ++ + + ++ ++ + + I + Sbjct: 65 TSILKIFSLIVISSGIILTIIFYNFSAVFKNFYLEEKTKFTSDSKYLAVITKNGLWIKDE 124 Query: 159 QQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR 218 + E++ + DK K+I +D I + + V Y Sbjct: 125 IDEKIYIVNSSKIESNFLINNFITEFDKDYKVIRNLKSDKINIQSTDWQAFNVKVYD-KN 183 Query: 219 IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 K + Q +S SFY++ + + + K + QF ++ Sbjct: 184 NYEIKKQLNIKTNFDYKRIQTLYSNLSSLSFYQLFE-LRKNYKKLNYSLIEINLQFLKIL 242 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 PL L + + ++ + R + ++ G+F ++Y I G + + + Sbjct: 243 SFPLYLFLVAIFSSLIMFRVKRLHNTTFKISLGLFFSVIIYYINNFFMVMGNTERISLIF 302 Query: 339 AALIPVILTISLSILILLQKED 360 A IP+IL ++ L+L + + Sbjct: 303 AIFIPLILLSIINSLMLNKINE 324 >gi|296532233|ref|ZP_06894980.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] gi|296267440|gb|EFH13318.1| permease YjgP/YjgQ [Roseomonas cervicalis ATCC 49957] Length = 381 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 107/363 (29%), Gaps = 16/363 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY F+ L +G LV++ + + S++ L +P Sbjct: 4 LDRYLFRQLGIGLLAVTIGLAALVWLTQSLRFIELVLDR-GLSLAVFVELTGLLLPSFFA 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I+P T VV + + LN ELV+ RA G+S WQL P ++ + L F + + + Sbjct: 63 VILPITTFVVTLFSYVRLNGDRELVVMRAAGLSDWQLSRPALLIATLATGFCLFLQLWLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + ++ + + + + I Sbjct: 123 PVSHAAFRSWQFEIRNEMAAILLQEGVFSSLGDDLTVYARRREADGTLRGILVHDMREPG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEY----------QYGRIPIDKNSTTLNIPIKM 234 + + L E + + +NS L + Sbjct: 183 TPVTIMAQEGRLVSTPAGPRVILLNGQREQLEPATATHPARLSVLSFAENSVDLASSSRS 242 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL--IAA 292 + R E++ + + + + + P ++M + +A Sbjct: 243 PVDVARNRDSRERFVPELLNP-DPAENLPERDIRKFRAEGHQRLASPFTALSMAMVGLAV 301 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 +++ F R R +L + I + +P+ + + + + Sbjct: 302 ALASGFRRHGDWRPAAIGVALVVALLALGLAIGNLAARDNRYIPLI--WLHTLGPVLGAA 359 Query: 353 LIL 355 +L Sbjct: 360 WVL 362 >gi|284799561|ref|ZP_06390218.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797389|gb|EFC52736.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 195 Score = 83.2 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 70/192 (36%), Gaps = 4/192 (2%) Query: 171 PENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---T 227 P++ + DK + + + +LK + G ++ ++ Sbjct: 3 PDHTLLGIKIWQRNDKNELTQAAEAESAVLNPDGSWQLKNIRRSILGEDKVEVSTAAEEN 62 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM 287 I +K + + S E+ + K+N + ++ +V P+ M Sbjct: 63 WPISVKRNLMDVLLVKPDQMSVGELTTYIDHLEKNNQ-NTQVYAIAWWRKLVYPVAAWVM 121 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 L+A + + + +R + + GI G + + + + + P A +P +L Sbjct: 122 ALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTVLF 181 Query: 348 ISLSILILLQKE 359 L++ ++ ++E Sbjct: 182 ALLAVYLIRRQE 193 >gi|251791280|ref|YP_003006001.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] gi|247539901|gb|ACT08522.1| permease YjgP/YjgQ family protein [Dickeya zeae Ech1591] Length = 370 Score = 83.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 124/356 (34%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ + L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGVPQMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+S LL ++ S+L + + Sbjct: 61 QLILPLSLFLGLLMTFGRLYAESEITVMHACGLSKSVLLKAALLLSLLTASLATANVLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ Q + N + Q + +F+G ++ Sbjct: 121 SPWSSRHQDEVLAQARANPGMASLAEGQFQQTQDGNSVLFVGKVNSGDFERVFLAQLHPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMDGFQ 238 + + ++ +A + + +Y R + + Sbjct: 181 ENTRPSVVVADRGTVAARGDGSQVVTLSKGTRYEGTAMLRDFRITDFINYQAIVGYQPVA 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + ++ F++ + + L ++ M ++ +S+ Sbjct: 241 VDPSNVEQMSLKTLWESSDIAARAE----------FHWRLTLILSVLVMAVMVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + + ++S G L P+ + ++ ++L++++ Sbjct: 291 PRQGRV-LSMLPAMLLYLVFFLLQSSLRSNAGKGKLDPMVWMWLTNLVYLALAVIL 345 >gi|119513620|ref|ZP_01632629.1| permease YjgP/YjgQ [Nodularia spumigena CCY9414] gi|119461725|gb|EAW42753.1| permease YjgP/YjgQ [Nodularia spumigena CCY9414] Length = 385 Score = 83.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 48/374 (12%), Positives = 128/374 (34%), Gaps = 22/374 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY + L+ + I+ I ++ Q + + L ++P I Sbjct: 12 LLERYLISELIPPLLFSIAIVTIVAESIGISFEQFKFLIERQLTFEILIYLHLLKLPEFI 71 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ I + L+ TSE++ + G+S+ +L+ P V+ + LL + I Sbjct: 72 VFAAPIAVLLATIFTYKKLSNTSEIIAIHSCGVSLDKLVYPAVMVAALLIPVLFIFNEVI 131 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++ + + Q + + + A++ ++ ++ + + Sbjct: 132 VIPANYKAAITLEKAMNINRLYFQKNDIFYQQIDNENTLDSLAQQNYLKHLLYAERFADG 191 Query: 184 IDKKNKIIHRK-----------------DADLAIIYNDKVKLKKVVEYQYGRIPIDKNST 226 ++ ++ R Y + RI D Sbjct: 192 QMQQVTLLMRDSEKLKVIIKSRFAECYGQQKFCYFYEGVKNIINADGSYGERIKFDTMPL 251 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLV 285 L + + + +++ +++ K+ N+R+ + +P+ Sbjct: 252 YLPNIALQLQIDQETLDNREMNIFQVYQRLLVFQKAGDRRNFRSLQVNIQERFTLPVSCA 311 Query: 286 AMTLIAASVSLEF-SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 L+ +++ + R+ + GI LY I ++ ++ + +P Sbjct: 312 VFALLGSAIGINLQPRTRYNSFSLTLGIIL---LYDAIQVIAKIFIISEIISFSWIWLPN 368 Query: 345 ILTISLSILILLQK 358 I+ ++ + +L++K Sbjct: 369 IVGTTVGVYLLIKK 382 >gi|78356991|ref|YP_388440.1| permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219396|gb|ABB38745.1| permease, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 397 Score = 83.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 128/376 (34%), Gaps = 19/376 (5%) Query: 1 MPGILWRY--------FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGA 52 M G L+R+ FK + L + L+ + + ++ + + A Sbjct: 1 MEGTLFRFHITLLQKQLFKELVSLFGLCLGSLLSLILIGRML-QLRELFLGLDLNALDMA 59 Query: 53 VLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILL 112 L PL + IIP ++ + F ++ ELV +A G+S++QLL ++ +L Sbjct: 60 TLFVYLSPLFLTLIIPIACMLSVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLC 119 Query: 113 GIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE 172 G+ + + G I + + K + Q + Sbjct: 120 GLLNLYISLSGVAWGMGNFRHTIMEIANTRAKIVLQPGVFNQTVPGLTVFARTVDNSSGK 179 Query: 173 NHIWEDFTSITIDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRI-----PIDKNS 225 + + I+ + + + L Y+ + + Sbjct: 180 LGHVLVEDNSRDETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQEDSVSVLDFNDYT 239 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF--YFLIVIPLM 283 L++ G + S+ E+ ++ N+ + V+P+ Sbjct: 240 VRLDLGQIFKGVSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKRWVLPMA 299 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + + L A ++ F ++ + + + YT++++ S G+SG + P +P Sbjct: 300 CLVLGLFAMPLACAFQGLDKQ-FGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMP 358 Query: 344 VILTISLSILILLQKE 359 ++ +++ + L + E Sbjct: 359 NLIFLAVGLFWLDRAE 374 >gi|197105168|ref|YP_002130545.1| hypothetical protein PHZ_c1705 [Phenylobacterium zucineum HLK1] gi|196478588|gb|ACG78116.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 378 Score = 83.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 37/361 (10%), Positives = 109/361 (30%), Gaps = 7/361 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + L + L + + + + S + +P Sbjct: 1 MRLIDRYLLRQLLGPVILATLALTGVALLSQTLSGLDLIVNQR-QSALVFLKVTLLAMPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I ++P V +V L+ E+V+ A G+S W++++P + + + +L+ Sbjct: 60 LINMVLPIAVFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAIRLACTVAFLALLMNL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + Q + + + + + G +++ Sbjct: 120 WVQPAAYREMRRELFQVRTDLASTLVREGEFTEPAPGLTVYAQGVDGAGNLENLFIHQMR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + ++ ++ + T + Sbjct: 180 DDGSATTYTAEQGRVGRSQGRP-VLVMRNGSNQEFSSTGVLNYLTFDEYIFDLSALTSSD 238 Query: 242 EQFASRSFYEIIKKM---SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 E + ++ + + + I PL +A +A S + Sbjct: 239 ELVHYKPSDRYPHELFFPDLQQDWERRNRLDLLAEGHARISSPLYNIAFMAMALSAIIGG 298 Query: 299 SRSN-QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 S +A + ++ + +++ + L V LIP + +L+ + + Sbjct: 299 GFSRLGYGRRIAAMGAAAAIVRILGFQVQAASEDAAWLNVFQYLIP-LAATALAFRSIFR 357 Query: 358 K 358 + Sbjct: 358 Q 358 >gi|163735795|ref|ZP_02143224.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] gi|161390881|gb|EDQ15221.1| hypothetical protein RLO149_00570 [Roseobacter litoralis Och 149] Length = 375 Score = 83.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 110/358 (30%), Gaps = 9/358 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY L +F L + ++++ + +Q+ S A +P +I Sbjct: 4 LDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDQLIS-DGQSALVFLEFTALGLPKLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P T + V +N SEL + +A G +L P +V +++ + ++ + + Sbjct: 63 TVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGVIVFLMASVLHHVLM 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + N + ++ S ++ Sbjct: 123 PLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQQIDDDGVLRDVFLSDRRHVE 182 Query: 185 ----DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 +D D + +++ + + +I + Sbjct: 183 EGVIYTAAHAYLIRDEDRTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDVSQ 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSLEF 298 + ++++ ++ F+ I PL + LI S + F Sbjct: 243 RLDPDRMTTFQLLTPWDQLSRETGRSIGTISQSFHARIADPLFCIVAALIGFSTLMIGGF 302 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 SR R + + + T+ + L P+ +P ++ L I +L Sbjct: 303 SRFGVWREVAFAFVLLVAIDGVRSTLQSPVRRDPELWPLL--YLPTFISALLVIAMLW 358 >gi|15893122|ref|NP_360836.1| hypothetical protein RC1199 [Rickettsia conorii str. Malish 7] gi|238650591|ref|YP_002916443.1| hypothetical protein RPR_03025 [Rickettsia peacockii str. Rustic] gi|15620329|gb|AAL03737.1| unknown [Rickettsia conorii str. Malish 7] gi|238624689|gb|ACR47395.1| hypothetical protein RPR_03025 [Rickettsia peacockii str. Rustic] Length = 362 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 144/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S L ++P + Sbjct: 5 KTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIY-VPFSFFWRLILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I T G + L + + S S + I + I + T Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDETQIIQTQFINVAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFT-KEETKAYNNLTMQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + + +Y + P+M++A ++A+ R Sbjct: 243 FIRPEMVSIWALPKLINELLNSGLPAIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 DNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLH 358 >gi|56416250|ref|YP_153325.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197365173|ref|YP_002144810.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56130507|gb|AAV80013.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096650|emb|CAR62265.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 366 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + K + Q +N +FI + + ++ Sbjct: 121 GPWSSKHQDEVLAEAKATPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L PV ++ ++L+I + Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLALAIGL 345 >gi|52842836|ref|YP_096635.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629947|gb|AAU28688.1| permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 333 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 103/326 (31%), Gaps = 2/326 (0%) Query: 32 DLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVIS 91 + N+ + L +P ++ ++P V ++ + L SE+ + Sbjct: 4 QFIQYLNRAAS-GSIPGFVIMKLLMLELPNLMGLLLPLGFYVALLLAYGRLYAESEMTVL 62 Query: 92 RAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIP 151 RA G QLL + ++ + +V+ + I LI+ Q Sbjct: 63 RACGYGPRQLLKHSFAMATVVLVVVAIVMIWASPVIAVERIKLIRSTGIKTLIQTIMPGR 122 Query: 152 WMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKV 211 + I++ QQ ++ + ++ + AD A + ++ Sbjct: 123 FHAINSGQQIFYVQSMNRDHSQAEQIFMAKHSVQDNRLLWDVLWADKAFAEVNPQTGEEY 182 Query: 212 VEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAE 271 + Q G+ + ++ + + H+ + Sbjct: 183 IVLQNGKEYQGVPGHADYQIAEFASYKSKLPNPTVVMHDDARTAKTRDLWPLNNHDLKKA 242 Query: 272 TQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS 331 + + I IPLM++ +TL+A +S RS + + I + + + + Sbjct: 243 AELQWRISIPLMVLTLTLVAVPLSRVSPRSGKYSK-LLPAIIIYIFYANFMFVSRDAIAT 301 Query: 332 GILLPVAAALIPVILTISLSILILLQ 357 G + + L IL + + Sbjct: 302 GKIPWWIGMWWVHVAVAILGILFIWR 327 >gi|254510429|ref|ZP_05122496.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] gi|221534140|gb|EEE37128.1| permease YjgP/YjgQ [Rhodobacteraceae bacterium KLH11] Length = 379 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 106/356 (29%), Gaps = 7/356 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 YF + L +F L + + ++ + +++ S A +P +I+ Sbjct: 4 FDGYFLRQLLVLFGFFTLVLVGVFWITRSVSLFDRVIS-GGQSAFVFLEFTALTLPTLIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + L+R SE+ + A G S W+L ++ + G+ ++ + Sbjct: 63 TVMPMAVFAAAVYATNRLSRESEMTVMLATGSSPWRLARAVLMFGLSAGLMMAVISVFLR 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + Q + ++ ++ + ++ T+ Sbjct: 123 PASVERLEQRQAEVAGDVTAQLLNEGEFLHPADGVTVYISRIDLDGTLHEVFVSDRRDTV 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNIPIKMDGFQKF 240 + + V L V + ++ + Sbjct: 183 NPVSYSSTTAYLVNQASGIHLVMLDGVALRFDQQGNTLSSTLFEDAAYDVSELTNNTGTD 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFS 299 + + E+I+ +++ + + + + +A+ L+ S + L Sbjct: 243 NRSREAIPTIELIRDRDTVAETDDHSLGQLVDELHQRFSWIAICIAVALVGYSTLMLGSF 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +L + + +P IL + +S L L Sbjct: 303 SRFGLWPQILGAFTILVLLEGVRGFVSPVVI-EDPRLWVLLYLPAILGVVVSGLFL 357 >gi|283780133|ref|YP_003370888.1| permease [Pirellula staleyi DSM 6068] gi|283438586|gb|ADB17028.1| permease YjgP/YjgQ family protein [Pirellula staleyi DSM 6068] Length = 386 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 45/376 (11%), Positives = 104/376 (27%), Gaps = 29/376 (7%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYS----ISRGAVLAATRV 59 + RY +++ L + L VID ++ + + V Sbjct: 3 TIDRYVLTIFIRVLLICFVSLAGLFVVIDCLGNLDEFSNYGEKHAGGILGVIFEYYSAHV 62 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 + I + +V I L RT EL A GIS + + + + ++ + Sbjct: 63 LGFFDRTIGLLAMVAAIFTVTWLQRTQELTALAAAGISPARAMRSVFIAAGIVALLGAAN 122 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQK--------------------SDIIPWMQISNPQ 159 Q W ++ I P Sbjct: 123 REFNLPQMRAKLGRNAQDWLGENSRRFVPKFDMRSDILISGASTVAKEQKIVAPNFLLPD 182 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI 219 +++ + ++ ++ +L V + I Sbjct: 183 DRTEQLPVELVSWGRAIQAREALYQPATDEHPSGYLMRGVTQPLAVAQLSSVSLHNEPTI 242 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEII----KKMSFSNKSNIFHNYRAETQFY 275 ++ L EQ A+ + + + ++ I + + Sbjct: 243 LAPRDHRWLAPDECFVSSVVTFEQLAASNAWRQYLSTYELVTGLKTRTIQPGADIKVTLH 302 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 +V PL+ + + + + L + A + + ++ S G + +L Sbjct: 303 ARLVQPLLDMTLLFLGLPLVLTKGNR-NIFLAAAICLLLVGSFFIVVMTCHSLGSNYLLS 361 Query: 336 PVAAALIPVILTISLS 351 P AA +P+++ L+ Sbjct: 362 PTMAAWLPLLIFGPLA 377 >gi|34581207|ref|ZP_00142687.1| hypothetical protein [Rickettsia sibirica 246] gi|28262592|gb|EAA26096.1| unknown [Rickettsia sibirica 246] Length = 362 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 144/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S L ++P + Sbjct: 5 KTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIY-VPFSFFWRLILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I T G + L + + S S + I + I + T Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDKTQIIQTQFINVAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFT-KEETKAYNNLTMQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + + +Y + P+M++A ++A+ R Sbjct: 243 FIRPEMVSIWALPKLINELLNSGLPAIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 DNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLH 358 >gi|67459625|ref|YP_247249.1| permease [Rickettsia felis URRWXCal2] gi|67005158|gb|AAY62084.1| Predicted permeases [Rickettsia felis URRWXCal2] Length = 362 Score = 82.8 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 145/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S L ++P + Sbjct: 5 KTLSWYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIY-VPFSFFWRLILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LGQVSSLISFTSMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I T G + L + + S S ++ I + I + T Sbjct: 124 IGTIGLQKYELLEAKLTKKTLSEGIISKSGLLFFESLKDENQIIQTQFINIAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 ILFVDSNNSFLKRIDALYGIIENKMLHLNRVKVFT-KEETKTYNNLTIQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + + +Y + P+M++A ++A+ R Sbjct: 243 FIRPEMVSIWALPKLINELLNSGLPAIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 DNSQEKILILGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIILH 358 >gi|332297890|ref|YP_004439812.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] gi|332180993|gb|AEE16681.1| permease YjgP/YjgQ family protein [Treponema brennaborense DSM 12168] Length = 381 Score = 82.8 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 117/362 (32%), Gaps = 10/362 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L Y K L + ++ FV + + + + ++ L + +P II Sbjct: 16 VLILYLVKELLLYFFIAFVFFFMVFFVNQILLMAEDVLKKR-VPLADVLKLISYSLPFII 74 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q PF TLV ++ + +E++I RA G S +L P ++ + + I + V + + Sbjct: 75 AQSAPFATLVGFLMCLGRMMSDNEILILRAAGKSFAVILVPALLLGLAISILSFFVNDYL 134 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI------FIGAKKILPENHIWE 177 G L + + + + + + I + + Sbjct: 135 LPLGTISYNKLYRSILMSDPSIELESNSIKRTESATLVIGDVSGRTVSDLIFFDTDPQGT 194 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ D + + ++ L + + T +N+ Sbjct: 195 RRVIVSGTADIVNSQNPDVLMQLDMDNARVLFFDKTEKRNYDMMSAEQTRMNVFTSSLFS 254 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHN---YRAETQFYFLIVIPLMLVAMTLIAASV 294 + Y++ + + E ++Y +P + L+A + Sbjct: 255 SSAYTNPREMTSYDLRTMIRNMKTQQEKSSLQLNMYELEYYKKFSLPFGSLFFALLAMPI 314 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ F + N I + G+F + + + ++FG L +P + + Sbjct: 315 AILFGKHNGQTIGLIIGLFICVAYWAAMILGQTFGIREGLSGFWTMWLPDLCVGAAGCAF 374 Query: 355 LL 356 L Sbjct: 375 YL 376 >gi|332524894|ref|ZP_08401081.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] gi|332108190|gb|EGJ09414.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2] Length = 358 Score = 82.8 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 114/350 (32%), Gaps = 8/350 (2%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + +T L+ + +V + L Q + +L + ++ Sbjct: 3 RELARTFGATLVVILTIVLTMFLIRTIGQAAG-GVVAPQDVVLLLGYVALGHLPTMLALS 61 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 V +V + R SE+VI A GI + + + P + S + + ++ + G + Sbjct: 62 LFVAVVVTLGRMYRDSEMVIWFAGGIGLSRFVRPVLRTSWPVLLVIAALLLFVWPWGNRN 121 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 ++L Q+++ D + + S+ + FI + + T + ++ Sbjct: 122 SLELRQRYEQRSDLSRVTPGVFQTSSDGSRVFFIERDTREGADARNVFIVAQTGETESVT 181 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 R + V L++ +K ++ + ++ E Sbjct: 182 SARSGRLERDGDDRFVVLERGQRNDVDLKTGEKAQSSFETYRVLADEKRAREAERQPP-- 239 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 + + + + + + M L+ ++ R + Sbjct: 240 KAMDTLDLLQDPTRPNQGELT----WRFGLLTGAGNMLLLGIGLAATNPRRASN-WNLLL 294 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + + +I + +++ SG L AA + ++++ +L ++ Sbjct: 295 ALLGFVVYFNLINLSQAWVASGRLGMGAALAVVHGSAFAIALGLLWWRDH 344 >gi|197336301|ref|YP_002155170.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] gi|197317791|gb|ACH67238.1| permease YjgP/YjgQ family protein [Vibrio fischeri MJ11] Length = 344 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 32/334 (9%), Positives = 104/334 (31%), Gaps = 20/334 (5%) Query: 29 FVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSEL 88 + + + L +P + ++P + ++ F L SE+ Sbjct: 1 MSQKFISVLADASD-GDIPGGLILSLVGLNMPAMGLLMLPLSIFIGILLTFGRLYAESEI 59 Query: 89 VISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSD 148 + A G+ L+ + +++ G ++ ++ L++ + + Sbjct: 60 TVMNATGMGNSILIRAALYLALITGAAATFNSLWLSPWSQEKTTQLMETVESDAGVDLLQ 119 Query: 149 IIPWMQISN-----PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYN 203 + + + DI K L + + ++ + + Sbjct: 120 KGQFQRSPDGKAVVFIDDISNKNGKELRHIFLAQPVPHDSLRPSVLVADKGVVKELKDGR 179 Query: 204 DKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN 260 ++L+ Y+ ++ N + + I ++ + + +++K+ Sbjct: 180 QVLELQDGTRYEGIPTRLDYLESNFKSYEVLIGQKEVKEKRRDWDAIPTLDLMKRPELEA 239 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 K+ + + I + + + +T++ +S R + + + + Sbjct: 240 KAEL----------QWRISLIICIPLLTMVVVPLSAVNPRQGRFAK-LGPAVLLYLAYFL 288 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ KS + G L P + + I++ Sbjct: 289 SLSAGKSAIEDGGLAPSIGLWAINATLLLVGIIL 322 >gi|229587132|ref|YP_002845633.1| Putative permease [Rickettsia africae ESF-5] gi|228022182|gb|ACP53890.1| Putative permease [Rickettsia africae ESF-5] Length = 362 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S L ++P + Sbjct: 5 KTLSWYLTKLYSKCFFIILFLLIGLLIISNVFDLLQKFKNIY-VPFSFFWRLILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I T G + L + + S S + I + I + T Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDETQIIQTQFINVAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFT-KEETKAYNNLTMQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K + S + + +Y + P+M++A ++A+ R Sbjct: 243 FIRPEMVSIWALPKLIHELLNSGLPAIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 DNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLH 358 >gi|59711021|ref|YP_203797.1| inner membrane protein [Vibrio fischeri ES114] gi|59479122|gb|AAW84909.1| conserved inner membrane protein [Vibrio fischeri ES114] Length = 344 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 32/334 (9%), Positives = 104/334 (31%), Gaps = 20/334 (5%) Query: 29 FVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSEL 88 + + + L +P + ++P + ++ F L SE+ Sbjct: 1 MSQKFISVLADASD-GDIPGGLILSLVGLNMPAMGLLMLPLSIFIGILLTFGRLYAESEI 59 Query: 89 VISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSD 148 + A G+ L+ + +++ G ++ ++ L++ + + Sbjct: 60 TVMNATGMGNSILIRAALYLALITGAAATFNSLWLSPWSQEKTTQLMETVESDAGVDLLQ 119 Query: 149 IIPWMQISN-----PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYN 203 + + + DI K L + + ++ + + Sbjct: 120 KGQFQRSPDGKAVVFIDDISNKNGKELRHIFLAQPVPHDSLRPSVLVADKGVVKELKDGR 179 Query: 204 DKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN 260 ++L+ Y+ ++ N + + I ++ + + +++K+ Sbjct: 180 QVLELQDGTRYEGIPTRLDYLESNFKSYEVLIGQKEVKEKRRDWDAIPTLDLMKRPELEA 239 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 K+ + + I + + + +T++ +S R + + + + Sbjct: 240 KAEL----------QWRISLIICIPLLTMVVVPLSAVNPRQGRFAK-LGPAVLLYLAYFL 288 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ KS + G L P + + I++ Sbjct: 289 SLSAGKSAIEDGGLAPSIGLWAINATLLLVGIVL 322 >gi|87310838|ref|ZP_01092964.1| hypothetical protein DSM3645_18031 [Blastopirellula marina DSM 3645] gi|87286353|gb|EAQ78261.1| hypothetical protein DSM3645_18031 [Blastopirellula marina DSM 3645] Length = 389 Score = 82.4 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 45/388 (11%), Positives = 112/388 (28%), Gaps = 39/388 (10%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY LK L +L+ ++ + + + A + +P Sbjct: 1 MRIITRYILWEILKIFFLALGALTLLIVLVGVVQQALR----EGLGPGPIARIIPYMIPD 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IP L + V+ L +EL +A G+S L P +++L I V + + Sbjct: 57 ALRFSIPGTILFASCSVYGRLASGNELAALKAAGVSPLAALWPGYAIALVLSIACVWLND 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI------ 175 + G + ++ Q + + + L I Sbjct: 117 IGVSWGSQGVRRVLVQSFEEIAYGMLRTHKSFSSDKLSILVREVDGRRLMRPQIVAAATP 176 Query: 176 --------------WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI 221 D I D ++ ++ VV P Sbjct: 177 TSPQLLISAAEAELHSDENHQLIISLIDSRIESDGSQQGVFEHPGRMDHVVSLSDELSPE 236 Query: 222 DKNSTTLNIPIKMDGFQKFSEQFASRS----FYEIIKKMSFSNKSNIFHNY--------- 268 ++ + + ++ + ++ + +++ + + + Sbjct: 237 HRSPSKILSSRIPQVLREERQIVQTQKEADIAWSAFAQIATLDAAQRTPPFDISYINSQI 296 Query: 269 -RAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R T+ + + L+ ++++ + + + Y ++ Sbjct: 297 NRLRTEPWRRWANGFSCLFFVLLGVPLAIKQRNPDFVTSFFMAFLPVLLVFYPLLAFAVD 356 Query: 328 FGKSGILLPVAAALIPVILTISLSILIL 355 K G + P A I + + +S+ L Sbjct: 357 RAKDGAVPPQ-AVWIGNVALLLVSLYYL 383 >gi|225627184|ref|ZP_03785222.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260168438|ref|ZP_05755249.1| hypothetical protein BruF5_08728 [Brucella sp. F5/99] gi|261757900|ref|ZP_06001609.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] gi|225618019|gb|EEH15063.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261737884|gb|EEY25880.1| permease YjgP/YjgQ family protein [Brucella sp. F5/99] Length = 402 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 FRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|220925665|ref|YP_002500967.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] gi|219950272|gb|ACL60664.1| permease YjgP/YjgQ family protein [Methylobacterium nodulans ORS 2060] Length = 388 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 112/312 (35%), Gaps = 13/312 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY F+ L L L G +++V + + ++ ++ +P Sbjct: 1 MKQIERYIFRIALSAFLACLAGLTGVIWVTQALRELDLITAK-GQTLLIFFLITGLSIPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ + P + + LN SEL++ A G+S L+ PF+ ++++G+ + Sbjct: 60 LLTIVAPVALFMAVLHALNRLNGDSELIVMSAAGMSPRHLMRPFLTLALIVGLAVAFLTI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + S + DL+ + + + + ++ I ++ P + F Sbjct: 120 QVLPSSFQELRDLLTRVRGDFIANVVQEGQF---TSLDSGITFHFRERGPGGTLLGIFMQ 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +++ + A+ + + L + + P ++++ + F+ Sbjct: 177 DRREAGRSVVYLAERGQAVDLDGQTYLVLEKGSIHRQQPNSRDASIITFARYAVDLAAFT 236 Query: 242 -------EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + RS +++ + R + + + L +AM LIA + Sbjct: 237 PPDTDTVYKPRERSTAQLL-FPDPNEHYYKLVKGRFRAELHDRLTAWLYPLAMALIAFA- 294 Query: 295 SLEFSRSNQPRI 306 +L R+ + Sbjct: 295 ALGDPRTTRQGR 306 >gi|157964920|ref|YP_001499744.1| putative permease [Rickettsia massiliae MTU5] gi|157844696|gb|ABV85197.1| Putative permease [Rickettsia massiliae MTU5] Length = 370 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 145/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S L ++P + Sbjct: 13 KTLSWYLTKLYFKCFFIILFLLIGLLIISNIFDLLQKFKNIY-VPFSFFWRLILYKIPYL 71 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI ++NP Sbjct: 72 LGQVSSLISFSAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLMLGIVFTTILNP 131 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I T G + L + + S + ++ I + I + T Sbjct: 132 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFEALNDENQIIQTQFINVAEKKLNNIT 191 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + L +V + N+ T+ + ++ Sbjct: 192 ILFVDHNNSFLKRIDALYGIIENKMLHLNRVKVFT-KEETKAYNNLTIQTNLSINSLVNK 250 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + + +Y + P+M++A ++A+ R Sbjct: 251 FIRPEMVSIWVLPKLINELLNSGLPVIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 309 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 310 DNSQEKILLLGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIMLH 366 >gi|262376976|ref|ZP_06070202.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] gi|262308014|gb|EEY89151.1| permease YjgP/YjgQ family protein [Acinetobacter lwoffii SH145] Length = 366 Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 108/353 (30%), Gaps = 14/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFG-VAAQGRLDAGILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL V +++ I ++ Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVMNGSGVSRHQLARLLVPMTLVFLIAQAGLMLWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G + L ++ ++ I+ + Sbjct: 121 APWGIRQFEALTTSQAVRTGFDLVRPKEFISSGPYTIYAGDLSEDRKNLKDIFFYQRAEK 180 Query: 184 IDKKNKIIHRKDADLAIIYN---DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K + +I ++A + N + V L Y+ + Sbjct: 181 EGKPDVMILAQEATRIEVPNDAANVVDLVNGRRYEIYPGTPQYTQAEFESYR-----LRL 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ ++ + S + ++ + + +P ++ ++A ++S R Sbjct: 236 ESDEEAQFASTEVEALPTSQLWQNRQDPVVASELGWRVFVPFAILIALILAVALSEVSPR 295 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + ++ ++ + K ++ I+ +I Sbjct: 296 QGRYLKLFPALMIFASLIVALMAVKTRISKEE-----MGIWAYPLILIAYAIA 343 >gi|283786943|ref|YP_003366808.1| permease [Citrobacter rodentium ICC168] gi|282950397|emb|CBG90045.1| putative permease [Citrobacter rodentium ICC168] Length = 366 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGIIAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + K N + Q SN +FI + ++ Sbjct: 121 GPWSSKHQDEVLAEAKANPGMAALAQGQFQQASNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWTTDTDRARAELHWRITLIFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + M + I T +KS G G L PV + +L ++L+I + Sbjct: 296 V-LSMLPAMLLYLMFFLIQTSLKSNGGKGKLDPVIWMWLVNLLYLALAIGL 345 >gi|239946701|ref|ZP_04698454.1| permease, YjgP/YjgQ family [Rickettsia endosymbiont of Ixodes scapularis] gi|239920977|gb|EER21001.1| permease, YjgP/YjgQ family [Rickettsia endosymbiont of Ixodes scapularis] Length = 362 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 145/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S L ++P + Sbjct: 5 KTLSWYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIY-VPFSFFWRLILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL + +EL + GI IWQ+L + +++LGI + ++NP Sbjct: 64 LGQVSSLISFTAMLFFLRNLTKNNELTAMLSSGIHIWQVLVIPCIVTLILGIVFMTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I T G + L + + S S ++ I + I + T Sbjct: 124 IGTIGLQKYELLEAKLTKKALSEGIISKSGLLFFESLNDENQIIQTQFINVAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +D N + R DA II N + L +V + N+ T+ + ++ Sbjct: 184 ILFVDSNNSFLKRIDALYGIIENKMLHLNRVKVFT-KEETKAYNNLTIQANLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + + +Y + P+M++A ++A+ R Sbjct: 243 FIRPEMVSIWALPKLINELLNSGLPAIN-YQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L + A L+P +L +S I+L Sbjct: 302 DNSQEKILILGLFSGFIAYSLSEILLKILTYNNLSLITAILLPSMLIFFISNFIILH 358 >gi|149173512|ref|ZP_01852142.1| hypothetical protein PM8797T_22248 [Planctomyces maris DSM 8797] gi|148847694|gb|EDL62027.1| hypothetical protein PM8797T_22248 [Planctomyces maris DSM 8797] Length = 388 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 48/378 (12%), Positives = 101/378 (26%), Gaps = 29/378 (7%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNY----------------- 46 RY K Y + + L V D + Sbjct: 7 TFDRYLLKRYFHVFVIGFIATYGLYVVFDGFTNIDGFQAGAEKVSSNDLNGLEVDQNAST 66 Query: 47 -SISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPF 105 + + L I P ++++ +VVF + R EL + GI ++L P Sbjct: 67 SLLWIMLEFYFYQSSLFFDMISPILSVLAGVVVFSLMVRHGELNPVLSAGIPTYRLAIPL 126 Query: 106 VVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 + +I++ L I S + + +I Q++F+ Sbjct: 127 AMATIIVNCVMCLNQEVIIPSIADKLQAERGDMASSAQFVEPVYDFSTRIMINGQEVFLT 186 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 +K+ + LK+ + Sbjct: 187 EQKMKNAEFVLSKPMVHDFVTVKSDTAIYQTPTQTRPGGW-LLKQATPSYQELEIAEFAR 245 Query: 226 TTLNIPIKMDGFQKFSE-------QFASRSFYEIIKKMS--FSNKSNIFHNYRAETQFYF 276 + + + ++ S ++ + + + + + Sbjct: 246 EIIQPGPEPNEIFIVTDVGCDQLCNRNFSSLISTSDLIARINNPSFSDLSIRKQKLDLHS 305 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 + P+M + LI+ L S + +A L+ I G + ++ P Sbjct: 306 RLTRPIMNLIAVLISIPFVLR-KESRSLILNIAICACVMGGLFGISQCFLYMGSTKLISP 364 Query: 337 VAAALIPVILTISLSILI 354 AA PVI +L+ Sbjct: 365 DQAAWFPVITNGTLAAWF 382 >gi|302383687|ref|YP_003819510.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] gi|302194315|gb|ADL01887.1| permease YjgP/YjgQ family protein [Brevundimonas subvibrioides ATCC 15264] Length = 376 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 110/358 (30%), Gaps = 8/358 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ +Y F+ L + + + + E S+ L VP + Sbjct: 3 LIQKYLFRQISLPVLAACASLAGIGILSQTLDQLEIIVER-GQSVWVLLKLTLLAVPQLF 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P V ++ L R EL + A G+S WQ++ P ++ + + +L I Sbjct: 62 SVILPIGLFVGALIALTRLQREQELTAAYASGMSRWQMIAPGAWLAVCVAVVMLLTNVVI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ + + + + ++Q N ++ +++ + Sbjct: 122 QPWSQRTAREQAFSIRTDLAALLVEEGRFVQGPNGLTVYVQQIEQNGLLKNLFIYIQNGD 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID--KNSTTLNIPIKMDGFQKFS 241 + + +K +Y + + + + QK Sbjct: 182 EVTTWDASEARFGRVDGQPVLTMKQGSWQQYSSAGVLQQLVFDGYVFPLGQYVTDDQKIR 241 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA--ASVSLEFS 299 + A ++ + + + + PL + +A A + FS Sbjct: 242 YKPADLWMGQLFNPTDAL-VRDTGSRGELLAEAHSRLSSPLYALTAMAMALTAILGGAFS 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R+ I + ++ + +G L L I+ ++++ +L + Sbjct: 301 RTGYSARIAKASGAFLLVRVVGYAVVAASAWNGWLNVFQYVL--PIVATAVALRLLFR 356 >gi|254447192|ref|ZP_05060659.1| permease YjgP/YjgQ family protein [gamma proteobacterium HTCC5015] gi|198263331|gb|EDY87609.1| permease YjgP/YjgQ family protein [gamma proteobacterium HTCC5015] Length = 353 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 118/355 (33%), Gaps = 14/355 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I RY + K++ LL ++L+ L ++ + + N + L + + Sbjct: 3 ITDRYLIREVAKSSAAVLLVLLVLMVGNTLVQLLSDAAD-GNMAPQYIWPLLVITLANYL 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + + ++ F L + +E+ A G+ W P +I + + +++ I Sbjct: 62 VLFMGLSLYLGGMLAFGRLYKDAEMAAMVACGMGPWDFFRPLFKVAIPISLAGLVLSVFI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + ++ N + + L + ++ S Sbjct: 122 LPWMAGLQAKFTSDAEKPSVETHLREGEFNELGNGIFFVEEQSGGALSQVFVYSRDPSGE 181 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + +DA L++ YQ ++ + ++ ++ Sbjct: 182 SIQVAESGRVEDAPSGYEL----TLQQGRLYQINTEQRIRDIRYQEYEVMVESPNAVVDE 237 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ N ++ + + +P+ + + ++A +S R Sbjct: 238 QVL--------AATQTSDLMRSDNPLEVAEWQWRLSVPIGCLLLAVLAFPLSYTSPRKG- 288 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + Y I + +++ +S ++ + + ++L I +LL++ Sbjct: 289 AFSKLGYAILVYILYSNFLSLGRSLVQNQEVPLWLGMWWAHLPVLALIIGLLLRR 343 >gi|23501574|ref|NP_697701.1| hypothetical protein BR0687 [Brucella suis 1330] gi|254701470|ref|ZP_05163298.1| hypothetical protein Bsuib55_11511 [Brucella suis bv. 5 str. 513] gi|254704017|ref|ZP_05165845.1| hypothetical protein Bsuib36_08829 [Brucella suis bv. 3 str. 686] gi|256060812|ref|ZP_05450972.1| hypothetical protein Bneo5_10667 [Brucella neotomae 5K33] gi|261324804|ref|ZP_05964001.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261752013|ref|ZP_05995722.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261754672|ref|ZP_05998381.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306845288|ref|ZP_07477864.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] gi|23347487|gb|AAN29616.1| membrane protein, putative [Brucella suis 1330] gi|261300784|gb|EEY04281.1| permease YjgP/YjgQ family protein [Brucella neotomae 5K33] gi|261741766|gb|EEY29692.1| permease YjgP/YjgQ family protein [Brucella suis bv. 5 str. 513] gi|261744425|gb|EEY32351.1| permease YjgP/YjgQ family protein [Brucella suis bv. 3 str. 686] gi|306274447|gb|EFM56254.1| permease YjgP/YjgQ family protein [Brucella sp. BO1] Length = 402 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDPNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|330720484|gb|EGG98783.1| putative permease [gamma proteobacterium IMCC2047] Length = 343 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 109/336 (32%), Gaps = 13/336 (3%) Query: 27 LVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTS 86 +V L +++ + + L R+P I+ ++P L+ ++VF + + Sbjct: 1 MVLTSRLVRYISEVAS-GDIAADFLFYLIVFRLPDILLMVLPISLLLAILLVFGRMYIEN 59 Query: 87 ELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQK 146 E+ + A G+S+ +L + L+ + + +A G K +L + + + Sbjct: 60 EMAVFSASGVSLKKLAVYAMASVSLVSLTVAALSFSLAPWGLKKVDELFVENANRTVFET 119 Query: 147 SDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND-- 204 + + ++ KK+ + + + Sbjct: 120 VRAGRFSPMGEDNMSLYAERLSDDQRVMSDVFIAREANGKKSNFQIMAEQGYLEVKPNSL 179 Query: 205 --KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS 262 + LK Y+ D T + S + + + + Sbjct: 180 AKYLILKNGYRYEGDPGSRDYKVTQFETFGIKLSSPPEQVKENSTRGMATGELLKLDSST 239 Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 I + I +PL++ + L+ +S R + ++ + F ++ Sbjct: 240 AIAE-------LQWRISLPLLVPIIALLGVPLSRVNPRQGRFYFLIP-AMLFYFAYLVLL 291 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + MK+ + + P ++ + L++L+ L Sbjct: 292 SGMKTAVEENTISPWLGLWWVHVMFLCLALLVFLNL 327 >gi|254713812|ref|ZP_05175623.1| hypothetical protein BcetM6_10745 [Brucella ceti M644/93/1] gi|254717130|ref|ZP_05178941.1| hypothetical protein BcetM_12054 [Brucella ceti M13/05/1] gi|261218945|ref|ZP_05933226.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261321556|ref|ZP_05960753.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] gi|260924034|gb|EEX90602.1| permease YjgP/YjgQ family protein [Brucella ceti M13/05/1] gi|261294246|gb|EEX97742.1| permease YjgP/YjgQ family protein [Brucella ceti M644/93/1] Length = 402 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 109/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G + P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAAMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|148559016|ref|YP_001258669.1| hypothetical protein BOV_0679 [Brucella ovis ATCC 25840] gi|254707609|ref|ZP_05169437.1| hypothetical protein BpinM_11726 [Brucella pinnipedialis M163/99/10] gi|254709808|ref|ZP_05171619.1| hypothetical protein BpinB_05961 [Brucella pinnipedialis B2/94] gi|256031299|ref|ZP_05444913.1| hypothetical protein BpinM2_11718 [Brucella pinnipedialis M292/94/1] gi|256159413|ref|ZP_05457191.1| hypothetical protein BcetM4_10693 [Brucella ceti M490/95/1] gi|256254707|ref|ZP_05460243.1| hypothetical protein BcetB_10510 [Brucella ceti B1/94] gi|261221887|ref|ZP_05936168.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261315099|ref|ZP_05954296.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|261317346|ref|ZP_05956543.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|265988384|ref|ZP_06100941.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] gi|265997850|ref|ZP_06110407.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|148370273|gb|ABQ60252.1| putative membrane protein [Brucella ovis ATCC 25840] gi|260920471|gb|EEX87124.1| permease YjgP/YjgQ family protein [Brucella ceti B1/94] gi|261296569|gb|EEY00066.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis B2/94] gi|261304125|gb|EEY07622.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M163/99/10] gi|262552318|gb|EEZ08308.1| permease YjgP/YjgQ family protein [Brucella ceti M490/95/1] gi|264660581|gb|EEZ30842.1| permease YjgP/YjgQ family protein [Brucella pinnipedialis M292/94/1] Length = 402 Score = 82.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|15604603|ref|NP_221121.1| hypothetical protein RP769 [Rickettsia prowazekii str. Madrid E] gi|3861298|emb|CAA15197.1| unknown [Rickettsia prowazekii] gi|292572419|gb|ADE30334.1| Putative permease [Rickettsia prowazekii Rp22] Length = 362 Score = 81.7 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L + L+ + ++ ++ + + S ++P + Sbjct: 5 KTLSLYLTKLYSKCFFIILFLLIGLLIISNIFDLLQKFKNIY-VPFSFFWRFILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL +++EL + GI IWQ+L + +++LGI ++NP Sbjct: 64 LSQVSSLISFTSMLFFLRNLTKSNELTAILSSGIHIWQVLIIPCIVTLILGIICTTILNP 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQK--SDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I+T G + L + + S+ S + + I K I + T Sbjct: 124 ISTIGLQKYSLLEAKLTKKALSECLISESGLLFFESLNEHNQIIQTKFIDVAEKKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ID N + R DA II N K+ L +V ++ T+ + ++ Sbjct: 184 ILFIDNNNSFLKRIDALYGIIDNKKLYLNRVKVST-KDEIKSYSNLTIQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + +Y + P+M++A ++A+ R Sbjct: 243 FMRPEMVSIWALPKLINELLNSG-LSAINYQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 CNSQEKILILGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSMLIFFISNFIILH 358 >gi|254465542|ref|ZP_05078953.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] gi|206686450|gb|EDZ46932.1| permease YjgP/YjgQ [Rhodobacterales bacterium Y4I] Length = 364 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 120/354 (33%), Gaps = 15/354 (4%) Query: 12 YYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFIT 71 YL +F L + + +V + + + S A +P +I+ ++P Sbjct: 3 QYLLFFGFFALILVAVFWVNRAVVLFDTLIG-NGQSALVFLEFTALTLPNLIRMVLPIAA 61 Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 + V LN SEL + RA G S WQ+ P + I+ + + + + + Sbjct: 62 FGAAVWVTNRLNSESELTVLRATGTSPWQMARPALAFGIITALMMSALTHYLLPASINQL 121 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKII 191 + + N + ++ P + + ++I P+ + + F S D + Sbjct: 122 EERESEVSRNITAKLLSEGDFLH---PAEGVTFYIRQIDPDGTLNDVFLSDRRDPAVTVT 178 Query: 192 HRKDADLAIIYNDKVKLKKVVEY-------QYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + L V + + +I + + Sbjct: 179 YTGTRAFLVRDEGSAHLIMVEGMAQRLDNETQRMSTTFFSDFSYDISALARKAENPARNI 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EFSRSN 302 + E++ +++ + + + L+ VA+ LI S + FSR Sbjct: 239 RAIPSLELMTSTEAVTRTDGYSAGAQAEELHLRFARALVCVAVALIGFSALMLGTFSRFG 298 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + F+ + + + L P+ +P +L +++S++ L+ Sbjct: 299 VWRQAFLAFVVLIFVEGLRGVVSEPVLDNPGLWPLI--YLPTLLGLAVSLIFLI 350 >gi|226329628|ref|ZP_03805146.1| hypothetical protein PROPEN_03538 [Proteus penneri ATCC 35198] gi|225202814|gb|EEG85168.1| hypothetical protein PROPEN_03538 [Proteus penneri ATCC 35198] Length = 232 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 85/229 (37%), Gaps = 1/229 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M G+L RY + L++ L L + L +I + ++G+ +++ + A + Sbjct: 1 MFGVLDRYIGRTILQSILMTLFLLVSLSGIIKFVDQLRKVGQ-GDFTTLDAGIYAILNIL 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +Q P L+ ++ L SELV+ +A G + Q+ + +I L + TVL+ Sbjct: 60 KDVQIFFPMAALLGALLGLGALATRSELVVMQASGFTRLQIAGSVMKTAIPLVLLTVLIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 A GE+ + + ++ W + N I + + DF Sbjct: 120 EWGAPQGEQYARNYRAEKIMGNSLVSTNRGMWAKDGNQFIHINRIKSQNEMQGITLYDFN 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN 229 + + + D+ D + + Q + KN LN Sbjct: 180 NDRKLETVRYASSATYDVDKKNVDAKTSRTIRLNQSTKKSPVKNRYHLN 228 >gi|254718823|ref|ZP_05180634.1| hypothetical protein Bru83_04675 [Brucella sp. 83/13] gi|265983808|ref|ZP_06096543.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306838745|ref|ZP_07471579.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] gi|264662400|gb|EEZ32661.1| permease YjgP/YjgQ family protein [Brucella sp. 83/13] gi|306406147|gb|EFM62392.1| permease YjgP/YjgQ family protein [Brucella sp. NF 2653] Length = 402 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDPNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|300718281|ref|YP_003743084.1| permease [Erwinia billingiae Eb661] gi|299064117|emb|CAX61237.1| Putative permease [Erwinia billingiae Eb661] Length = 356 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 114/356 (32%), Gaps = 10/356 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY ++ + ++G ++++F + ++ + +V + Sbjct: 1 MSLIERYITVE-IRRLVMVIVGFLVVMFASYSAQRYLTDAANGTLALQVVFDVVCYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V L SE+ A G S +L + +I L + L+ Sbjct: 60 ALEMLLPVGLYVATAVALGQLYTDSEITAIFAAGASPVRLYKAVLFLAIPLAVVVTLLSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D + + + A +I P +H D Sbjct: 120 YGRPWAYGNIYRLEQQSQSVLDVSHLQANKF---NVNGSGRMVMASRIDPASHQLTDALI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + KN ++R + + + + + + + ++ K Sbjct: 177 YSRSGKNTNLYRAHSVVVTDPSPATPSVNLRNGTAYVLDREGAQDNMQHYHSLNIALKPF 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E+ +K + + + + + L + M L+A +S R Sbjct: 237 -----IESQEVRRKSAPVADLWCSSDPADKAELQWRESRGLSTLLMVLLAIPLSRTKPRQ 291 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + ++ + + Y + ++ +G L + + ++ ++ L + Sbjct: 292 GRYATLLPLTLLFTAIFYG-GNVCRTLVANGSLPAIPGVWLVPLVMLTGLAFCLAR 346 >gi|149378264|ref|ZP_01895976.1| predicted Permease [Marinobacter algicola DG893] gi|149357461|gb|EDM45971.1| predicted Permease [Marinobacter algicola DG893] Length = 352 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 106/341 (31%), Gaps = 12/341 (3%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 L +++ + + + A R P ++ I+P + + Sbjct: 1 MLAVSGILLLVFMSGRFIKYLADAA-AGELAGDVLFQIMAYRFPGFLELILPLGFFIGIL 59 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + + + SE+ + A G+S QLL ++GSI + + + ++ G K + Sbjct: 60 LAYGRMYLESEMTVLFACGVSDKQLLMKTLLGSIPVMLVVGAMSLYVSPWGMKKVEGIFN 119 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 + + + + + S + + + + E + K + Sbjct: 120 EQRQATEFEMLAPGRF--QSLSSGERVTYTEALSEDKRRLEGVFIAEHSEDGKGLTI--- 174 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 + + ++ + L + D + RS K++ Sbjct: 175 --ITAREGSQFIDEETGSRFLVLEDGARFEGLPGQLAYDVTGFEAYGLKIRSGSAGEKEL 232 Query: 257 SFSNKSNIF---HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 ++ + ++ +PL++ +TL+A +S R + + + Sbjct: 233 EEGLATSALMASDDPEHRAMLHWRFTLPLIVPIVTLLAVRLSRVNPRQGR-FFHLLPAML 291 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + + + G + L L + L + + Sbjct: 292 VYITYLGLLIVARDALEGGKVPEWIGLLWVHGLFLVLGLWL 332 >gi|145588807|ref|YP_001155404.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047213|gb|ABP33840.1| permease YjgP/YjgQ family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 371 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 105/351 (29%), Gaps = 6/351 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + TT L + ++ + I + VL + + ++ Sbjct: 7 LRRELSLTTGGVFLVLVTIMITTLVIRILG-FAANGAINPEDVLVLISLATLGYLAVLLT 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 V ++V + SE+++ A G+SI L+ P + + L I L+ + Sbjct: 66 VSLFVATLIVLVRWYKDSEMIVWFASGLSISNLIRPILQFATPLIIIIALLALFVWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN-HIWEDFTSITIDKK 187 + + Q+++ D + + + ++ FI + S Sbjct: 126 RESTLISQRFQQRDDVSMVSSGQFRESARAERVFFIEELDVDKNEVKNIFVADSKNGRVS 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + + V L Y+ D + E A Sbjct: 186 VAVASAGYIQNSEDGEKSVVLHNGRRYEGQPTQPDFRILEFT---DYTTKIRSKEALAPP 242 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 N++ + + I +PLM + + LIA ++ R Sbjct: 243 PRDREKTISELLNETEPTTINPNRAELLWRIGLPLMALGLVLIAIPLAYVNPRLGNYT-A 301 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + Y I + ++ + ++F G +L + ++ +++ + Sbjct: 302 MFYAILIYLIYSNLLNLTQNFVSQGKFGFFVGIWPIHLLALVIATILIRNR 352 >gi|256369122|ref|YP_003106630.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] gi|255999282|gb|ACU47681.1| permease YjgP/YjgQ family protein [Brucella microti CCM 4915] Length = 402 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 109/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ M +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDPNDPMLQTRPLTYKAELHRRFTQWIYPLI-FTMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|254437787|ref|ZP_05051281.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] gi|198253233|gb|EDY77547.1| putative permease, YjgP/YjgQ family [Octadecabacter antarcticus 307] Length = 379 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/357 (10%), Positives = 111/357 (31%), Gaps = 9/357 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY L +F L +++ ++ + +++ S L + +P +I+ Sbjct: 4 FDRYMLSQLLVLFGFFSLILVVIYWINRAVRLFDRLI-ADGQSAWVFLELTSLSLPSVIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P V + V ++ SEL + +A G S ++L P + +++ ++ + + Sbjct: 63 IVLPLSAFVAAVYVTNRMSSDSELTVVQATGYSPFRLARPIIYFGLIVAALMSVLTHILV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + ++ S+ I+ ++ Sbjct: 123 PLSTEQLTSRQSEISQTMTARLLTPGEFLTPSDDVTFYIRELTPSGEMLDIFISESTDPT 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKMDGFQKF 240 + R V + + + + ++ M+ Sbjct: 183 RRTTYTAARAYLVRTENGPQLVMIDGLTQTLDHETNRLLTTGFADFVYDVGALMNDEFVR 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFS 299 S +++ + + + Y + + + I + L+ S + + Sbjct: 243 RVSVNGLSTLALLRPSAAAIAATNKTGYELKLRGHDRIAQAALGFVAGLVGFSALVVGGF 302 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSG-ILLPVAAALIPVILTISLSILIL 355 + + + +L + + S ++ L P + I + +S ++L Sbjct: 303 SRFGLWRNILFAVGLVILLKILESTGTSIARANPALWPF--VYLAGIGGVVISAILL 357 >gi|271498968|ref|YP_003331993.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] gi|270342523|gb|ACZ75288.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech586] Length = 372 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 124/356 (34%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ + L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGVPQMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+S LL +V ++L + + Sbjct: 61 QLILPLSLFLGLLMTFGRLYAESEITVMHACGLSKNVLLKAALVLALLTASLATANVLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + + N + Q + +F+G ++ Sbjct: 121 SPWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKVNGGDFERVFLAQLHPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMDGFQ 238 + + ++ +A + + +Y R + + Sbjct: 181 ENTRPSVVVADKGTVAARGDGSQVVTLSKGTRYEGTAMLRDFRITDFINYQAIVGYQQVA 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 SF + + + ++ F++ + + ++ M ++ +S+ Sbjct: 241 VDPTNVEQMSFKTLWRSSDIAARAE----------FHWRLTLIFSVLMMAVMVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + + ++S G L P+ + ++ +SL++L+ Sbjct: 291 PRQGRV-LSMLPAMLLYLVFFLLQSSLRSNAGKGKLDPMVWMWLTNLVYLSLAVLL 345 >gi|170743203|ref|YP_001771858.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] gi|168197477|gb|ACA19424.1| permease YjgP/YjgQ family protein [Methylobacterium sp. 4-46] Length = 388 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 110/313 (35%), Gaps = 13/313 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY F+ L L L G +++V + + ++ ++ +P Sbjct: 1 MKQIERYIFRIALGAFLACLAGLTGVIWVTQALRELDLVTAK-GQTVLIFFLITGLSIPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ + P + + LN SEL++ A G+S QLL PF+ ++++ + Sbjct: 60 LLTVVAPVALFMAVVHALNRLNGDSELIVMSAAGMSPRQLLRPFLTLALIVSAALGFLTI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + S + DL+ + + + + ++ I ++ P + F Sbjct: 120 QVLPSSFQELRDLLTRVRGDFIANVVQEGQF---TSLDNGITFHFRESAPGGVLLGIFMQ 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + A+ + + L + + ++++ ++ F+ Sbjct: 177 DRREAGRSVTYLAERGQALDLDGQTYLVLEKGSIHRQQQNSRDASIISFARYAVDLAAFT 236 Query: 242 -------EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + RS +++ + R + + + L +AM LIA + Sbjct: 237 PPDTDTVYKPRERSTAQLL-FPDPNEHYYKLVKGRFRAELHDRLTSWLYPLAMALIAFA- 294 Query: 295 SLEFSRSNQPRII 307 +L R+ + Sbjct: 295 ALGDPRTTRQGRG 307 >gi|62289649|ref|YP_221442.1| hypothetical protein BruAb1_0706 [Brucella abortus bv. 1 str. 9-941] gi|82699577|ref|YP_414151.1| YjgP/YjgQ permease [Brucella melitensis biovar Abortus 2308] gi|189023899|ref|YP_001934667.1| permease [Brucella abortus S19] gi|237815139|ref|ZP_04594137.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254688959|ref|ZP_05152213.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|254697093|ref|ZP_05158921.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254729989|ref|ZP_05188567.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|256257207|ref|ZP_05462743.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|260545599|ref|ZP_05821340.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260754448|ref|ZP_05866796.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260757667|ref|ZP_05870015.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260761494|ref|ZP_05873837.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883477|ref|ZP_05895091.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297248057|ref|ZP_06931775.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] gi|62195781|gb|AAX74081.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82615678|emb|CAJ10665.1| Predicted permease YjgP/YjgQ family [Brucella melitensis biovar Abortus 2308] gi|189019471|gb|ACD72193.1| Predicted permease YjgP/YjgQ family [Brucella abortus S19] gi|237789976|gb|EEP64186.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260097006|gb|EEW80881.1| permease YjgP/YjgQ family protein [Brucella abortus NCTC 8038] gi|260667985|gb|EEX54925.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 4 str. 292] gi|260671926|gb|EEX58747.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674556|gb|EEX61377.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 6 str. 870] gi|260873005|gb|EEX80074.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 9 str. C68] gi|297175226|gb|EFH34573.1| YjgP/YjgQ family permease [Brucella abortus bv. 5 str. B3196] Length = 402 Score = 81.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWAVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|294852049|ref|ZP_06792722.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] gi|294820638|gb|EFG37637.1| hypothetical protein BAZG_00965 [Brucella sp. NVSL 07-0026] Length = 402 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASMPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|327398771|ref|YP_004339640.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181400|gb|AEA33581.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 121/358 (33%), Gaps = 13/358 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K + + + +++ + DL ++ + + + S + V Sbjct: 1 MLKKLDRYILKSLIVSFVISFFVIAVVMLIGDLVKLYDLLFGKGS-SFIVLLKILGYTVV 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + V+ +L+ SE+ R+ GIS++++ P + S+ + +F I Sbjct: 60 FLLAFIVPMALTIAINYVYSDLSNNSEITAIRSCGISLFRVYFPAFLFSVAVFVFLFYSI 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A I + N + + I + ++ Sbjct: 120 AFVAPKARLSYRVEIAKTFRNKVYAALKPNMFYDKVDGVMWIKNLSPDKKHLKDVFFAQK 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K + + + + + G + L F+ Sbjct: 180 GKIFLAKKGDFKDIPSGILAEFFNVKMY---SPSKSGFEYGSFDRYELAFLTGRGYFKPN 236 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 SF E++ S S + + ++ + + + A++LIA S + FSR Sbjct: 237 KNNTRFMSFGEVVNYYSKSKSKDALYR------INKIVSMSMSVFALSLIAFSFGITFSR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + +F FM Y I+ + +S + +P ++ I +K Sbjct: 291 SGKSA-GIVASLFLFFMFYIILMLSESLCDATGNPYFI--YLPNVVAFVFGSYIFYKK 345 >gi|317493503|ref|ZP_07951924.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918446|gb|EFV39784.1| YjgP/YjgQ permease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 356 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 102/356 (28%), Gaps = 10/356 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + + + + + ++ + +V + Sbjct: 1 MKLIEHYIMAEIRRLVVIIVGFLIFIFASYSAQRYLTEAAN-GTLALEVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V L SE+ AIG S +L ++ +I L I L+ Sbjct: 60 ALEMLLPVGLYVSVGVALGQLYTDSEITAISAIGASPIRLYKAVMLLAIPLSILVTLMSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D + + + + +TS Sbjct: 120 YARPWAYAQIYQLEQQSQSELDVSHLRAKMFNINDSGRMILSEEINPDSNHLTDVLIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D V L Y D +S + + +D Sbjct: 180 SGNKTSVYRAKTVDVTNPSPITPSVILHSGTGYTLRHQGTD-DSERVYRNLTLDLKPLNL 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A R +I + ++ ++ + + M L+A S+S R Sbjct: 239 SVDAKRKAKSVIALIRSADPADYAEV-------QWRESRGVNAFLMALLAISLSRVKPRQ 291 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + ++ I + Y + +S SG L + +L ++++ + Sbjct: 292 GRFSTLLPLTILFTVIFYG-GNVCRSLVASGYLSVTPGVWLVPMLMFIGVLVLIAR 346 >gi|313672807|ref|YP_004050918.1| permease yjgp/yjgq family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939563|gb|ADR18755.1| permease YjgP/YjgQ family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 364 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 117/353 (33%), Gaps = 3/353 (0%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 YF K ++ + I+ + + + R P+ + Q + Sbjct: 7 YFLKILIRNFIVVEAFVYIIYMFFMFFTQSKYIARY-GATFKDIFIYDVMRSPVFVSQTL 65 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P +V +V F L RT+E+ +IG S+ +L + S + + + + Sbjct: 66 PVSFIVAVVVTFIILIRTTEITAYVSIGGSLLSILKVLIFLSFSVSLVMFFLTEFVVPKS 125 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + D ++ + ++ + + I + I +G I+ + F + + K Sbjct: 126 QVKSNDYKTKYIEKREEVRVTTLNNFWIKDKNSFIQVGTIDIINKKLFDIKFIDLDENGK 185 Query: 188 NKIIHRKDADLAIIYNDKVKL--KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + I L K+V +I ++ + Sbjct: 186 IVKVRYISQADYIEGKKWSVLEYKEVDTTDVPKIVKEEKNLEQENDFFTKLVDVSLVSQP 245 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + IKK+ KS R +Y I L +V + ++ ++ SR Sbjct: 246 KELTFSEIKKIVKFYKSKGLSYSRHMCYYYNKIANILNVVLLVIVVLPFLIDLSRGFSYV 305 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 GI F+ + + S GKSG++ P + + + I++ +K Sbjct: 306 RAAGNGIVIIFLYFIAQSTFFSMGKSGVMPPFWSNFLGYFIFIAVGFFEYYRK 358 >gi|254360524|ref|ZP_04976673.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261492350|ref|ZP_05988912.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496136|ref|ZP_05992544.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091064|gb|EDN73069.1| possible inner membrane protein [Mannheimia haemolytica PHL213] gi|261308238|gb|EEY09533.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312033|gb|EEY13174.1| putative inner membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 369 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 109/351 (31%), Gaps = 9/351 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ L L +++ F L + + L +P + Sbjct: 2 ILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVS-GKVPADLVVSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ SE+ + RA GI L+ + SI V + + Sbjct: 61 QLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVAMFLSIFTTALAVYNVFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++ + K N +M I L + ++++ Sbjct: 121 TPWAINKQSEMLAEAKANPRFAALSAGQFMSAGGYVLFIDKIENNSLNDIYVFQPEQQKK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + L + ++ D + G+Q Sbjct: 181 NKPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSADFRISHFENYSAYLGYQDVESD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K M A+ + ++ + + L + M L+A +S R + Sbjct: 241 EKLVQRADFKKLMET-------KTPEAKAELHWRLALILAVPLMALLAVPMSSVNPRQGR 293 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + + + +KS G SG L + + + L +++ Sbjct: 294 FAKLLPALLLYLIYF-LLQSSLKSSGASGKLNAEVLMPLVSVAFLVLGVIL 343 >gi|293393093|ref|ZP_06637408.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] gi|291424239|gb|EFE97453.1| inner membrane protein YjgP [Serratia odorifera DSM 4582] Length = 393 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 127/351 (36%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F +L + + + + L A VP + Sbjct: 31 IIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVD-GDVPTNLVLSLLALGVPKMA 89 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ +V ++L + + I Sbjct: 90 QLILPLSLFLGLLMTLGRLYTESEITVMHACGLGKRTLIIAAMVLALLTSLVAAANVFWI 149 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++I + K N + + +F+G K N+++ Sbjct: 150 GPWASSHQDEVIAEAKANPSIAGLAEGQFQPSQDGNAVLFVGNVKGNTFNNVFLAQLRPN 209 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + + + + ++ + ++ + + Sbjct: 210 GNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFSDYKAVVGHRAVA 269 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + A +F++ + + + +V M L+ +S+ R + Sbjct: 270 MDNTQAEQM-----SMLTLWQSDDQEARAEFHWRLTLVVSVVLMALLVVPLSVVNPRQGR 324 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + + + T ++S G L P+ + + ++++ + Sbjct: 325 V-LSMLPAILLYLIFFLLQTSLRSNAGKGKLDPMLWIWLVNAVYFAIALAL 374 >gi|163842957|ref|YP_001627361.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] gi|163673680|gb|ABY37791.1| permease YjgP/YjgQ family protein [Brucella suis ATCC 23445] Length = 402 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVRVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDPNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|161618656|ref|YP_001592543.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260566734|ref|ZP_05837204.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] gi|161335467|gb|ABX61772.1| permease YjgP/YjgQ family protein [Brucella canis ATCC 23365] gi|260156252|gb|EEW91332.1| permease YjgP/YjgQ family protein [Brucella suis bv. 4 str. 40] Length = 402 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 111/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF+ ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFVLIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDPNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|17987545|ref|NP_540179.1| hypothetical protein BMEI1262 [Brucella melitensis bv. 1 str. 16M] gi|225852207|ref|YP_002732440.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|256044380|ref|ZP_05447284.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113223|ref|ZP_05454091.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|256264285|ref|ZP_05466817.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] gi|260563732|ref|ZP_05834218.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|265990798|ref|ZP_06103355.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994634|ref|ZP_06107191.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|17983248|gb|AAL52443.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1 str. 16M] gi|225640572|gb|ACO00486.1| permease YjgP/YjgQ family protein [Brucella melitensis ATCC 23457] gi|260153748|gb|EEW88840.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. 16M] gi|262765747|gb|EEZ11536.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 3 str. Ether] gi|263001582|gb|EEZ14157.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094545|gb|EEZ18354.1| permease YjgP/YjgQ family protein [Brucella melitensis bv. 2 str. 63/9] Length = 402 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 111/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAIMFFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + + ++++ + ++ + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSC 179 Query: 182 I------TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|86131956|ref|ZP_01050553.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] gi|85817778|gb|EAQ38952.1| predicted permease YjgP/YjgQ family [Dokdonia donghaensis MED134] Length = 552 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 1/160 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY F ++KT L M + + + ++ + +P Sbjct: 1 MKILDRYIFFTFVKTFLSIFTILMFIFVLQSVWLYIQELAGR-DLDFDVILKFLLFAMPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P L+ +I+ F N E ++ GIS+ + + + I LGI + L N Sbjct: 60 LVTLVLPLSVLLTSIMTFGNFAENYEFAAMKSTGISLQRAMKSVIFFIIFLGIASFLFAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD 161 + + + +L + ++ + Sbjct: 120 YVIPASQYEFRNLRNNIGKMKPAMLIRSGQFNEVGDDFNM 159 Score = 56.6 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 17/200 (8%), Positives = 58/200 (29%), Gaps = 5/200 (2%) Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 D I+ + + ++ + K ++ + + D + V + Sbjct: 258 RDIDNTYQMMDIVLLDSSITALSERFVEDRTKFTNKYVSRIKPPPVDTLYQGNVKQQSAE 317 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 ++ + +++ K + K + + + E + Sbjct: 318 IKEAILDNYEIKDRVRILEIAKSNISNTIADIENRKKILKID----VKRLSKFEISLHEK 373 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 V+ + + + A + R + + G+ + I K+ + + P Sbjct: 374 YVLGFSCILLFFVGAPLGA-IIRKGGLGLPIVIGVVLFLTFHFIGIFAKNSAEDNSISPF 432 Query: 338 AAALIPVILTISLSILILLQ 357 A+ + + L + + + Sbjct: 433 IASWLSTFILFPLGVYLTYR 452 >gi|238793061|ref|ZP_04636690.1| Inner membrane protein yjgP [Yersinia intermedia ATCC 29909] gi|238727661|gb|EEQ19186.1| Inner membrane protein yjgP [Yersinia intermedia ATCC 29909] Length = 364 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 122/356 (34%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALFTSALAAVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGREFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 +++ ++ + + L K Y+ R + I Q Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S ++ + + +F++ + + + ++ M L+ +S+ Sbjct: 241 QNNNVAEQMSMKQLWR----------ANQPDTRAEFHWRLTLIVSVIIMALLVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + + ++S +G L P I +++++++ Sbjct: 291 PRQGRV-LSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPFIWMWIVNGAYLAVAVVL 345 >gi|255320991|ref|ZP_05362164.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262379919|ref|ZP_06073074.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255301955|gb|EET81199.1| permease YjgP/YjgQ family protein [Acinetobacter radioresistens SK82] gi|262298113|gb|EEY86027.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 366 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 119/351 (33%), Gaps = 10/351 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + S + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFG-VAAQGRLDASILLSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + GIS +L + +++ + +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGISRNRLARLLIPLTLVYMLVQSILMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + G + L ++ ++ I+ + Sbjct: 121 SPWGIRQFEQLTTSQAVRTGFDLVRPKEFISSGPYTIYAGSLSEDHKNLKEIFFYQRAEK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K + +I K+A + +D + +V+ + I + + + ++ E Sbjct: 181 PGKPDVMILAKEATRVEMMDDSANVVDLVQGRRYEIYPGQPRY---SQAEFESYRLRLEN 237 Query: 244 FASRSF-YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + +F + + ++ S + E++ + I +P ++ ++A ++S R Sbjct: 238 DKTANFESDDVAALTTSKLWEQRADPVVESELGWRIFVPFAIMVALILAMALSEVSPRQG 297 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + ++ ++ I K + + ++ Sbjct: 298 RYMKLFPALLIFASLIVALMAIKTRASKDE-----IGIWAYPAVLLVYAVA 343 >gi|238785038|ref|ZP_04629035.1| Inner membrane protein yjgP [Yersinia bercovieri ATCC 43970] gi|238714079|gb|EEQ06094.1| Inner membrane protein yjgP [Yersinia bercovieri ATCC 43970] Length = 364 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 124/356 (34%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLILAALILALGTSALAAVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 +++ ++ + + L K Y+ R + I Q Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S + ++ + + A +F++ + + + +V M L+ +S+ Sbjct: 241 QNSNVAEQMTMKQLWRS----------NEADARAEFHWRLTLIVSVVIMALLVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + + ++S +G L P+ + +++++++ Sbjct: 291 PRQGRV-LSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPLLWMWTVNGVYLAIAVIL 345 >gi|254501938|ref|ZP_05114089.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] gi|222438009|gb|EEE44688.1| putative permease, YjgP/YjgQ family [Labrenzia alexandrii DFL-11] Length = 395 Score = 81.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 117/363 (32%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + L +V+ + + +I + + +P Sbjct: 1 MNTLERYIIRRTAYAFTLTLAAMTGVVWATQALRQLDLVTSK-GQTIVQFIGITMLALPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I + PF ++ I+V +L+ SEL++ A G S + +L P + + ++ + + Sbjct: 60 LIVTVAPFALMIALILVLNSLSGDSELIVIDASGGSRFLVLKPVLAFATIIMLLVSALSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +G I + + + ++ + + + T Sbjct: 120 YVAPAGLAQLRTEITRVRADLVANIVKPGRFINVEEGLTFHIRNRSGKGTLDGLLMHDTR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDGF 237 + A V ++ + + S ++ + Sbjct: 180 DPDTAFTYQAETGNIVEAAGRTLLVMQNGTIQRRPKQVGDMSIVRFQSYAFDLSNLIPEA 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV--S 295 + + + RS ++ + + H R + + +PL ++ LI + Sbjct: 240 SEPVFKPSERSTANLLGPPGNDYFA-VTHPERLRAEIHERFSLPLYCLSFALIVFAFLGV 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA-LIPVILTISLSILI 354 +R + + + I +L T + + + + A + +L L+++ Sbjct: 299 ARTTRQGR-GMAIVGAITCCVLLRTTGFGITAISNDSAV--LYAMRYVVPVLGGGLALVS 355 Query: 355 LLQ 357 +L+ Sbjct: 356 ILR 358 >gi|254693441|ref|ZP_05155269.1| Predicted permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|261213694|ref|ZP_05927975.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] gi|260915301|gb|EEX82162.1| permease YjgP/YjgQ family protein [Brucella abortus bv. 3 str. Tulya] Length = 402 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 110/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + L A+ + + + + + N + ++ +P Sbjct: 1 MRLIELYILRRVAFMFFAVLGAAVGITWAVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++PF ++ +N+ SELV+ A G ++ P ++ + + + + L+ N Sbjct: 60 AIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + +I + + + I ++ + + Sbjct: 120 YVEPYARINMRAMIANASADLMHVIIQEGTFRKLADNLYIQVAERRADGSIGGLFIADSR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I I D+ ++ N +V+ + V + I D + LN Sbjct: 180 DPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAG 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ ++ + + + PL+ AM +A + Sbjct: 240 DDFVIFAKDRPLTYLLNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGD 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + I + ++Y + L+P+++ + ++L Sbjct: 299 SRSHREARVSAS-FSAISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 357 >gi|269213541|ref|ZP_06158032.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146393|gb|EEZ72811.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 182 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 68/181 (37%), Gaps = 4/181 (2%) Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQ 238 + DK + + + + +LK + G ++ ++ T I +K + Sbjct: 1 MRNDKNELMQATEAESAVLNNDGSWQLKNIRRSTLGEDKVEVSTAAEETWPIAVKRNLMD 60 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S E+ +S +N + ++ +V P+ M L+A + + + Sbjct: 61 VLLVKPDQMSVGELTTYISHLENNNQ-NTQIYAIAWWRKLVYPIAAWVMALVAFAFTPQT 119 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 +R + + GI G + + + + + P A +P I L++ ++ ++ Sbjct: 120 TRHGNMGLKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTIAFALLAVWLIRRQ 179 Query: 359 E 359 E Sbjct: 180 E 180 >gi|73542369|ref|YP_296889.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] gi|72119782|gb|AAZ62045.1| permease YjgP/YjgQ [Ralstonia eutropha JMP134] Length = 373 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 108/351 (30%), Gaps = 9/351 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + T L + + + I + S + +L + ++ Sbjct: 7 LRRELAYTAGAVFLVMLTFMLTSLVIRILG-LAANGKASPNDVLILIGLATIGYLSILLS 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++V + SE+V+ + GIS+ L+ P + + + ++L+ Sbjct: 66 ATLFISTLIVLTRWYKDSEMVVWFSAGISLRDLVKPVLQFAAPFILLSLLLGLFAWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSITIDKK 187 + +++ G +++ SN +FI G + + Sbjct: 126 QQSTLFRDRFEQRGVLSMIAAGRFIEPSNGNYVLFIEGIDGNMKYARNVFVANAEANKIG 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + H+ + + V ++ Y ID + + + Sbjct: 186 VALAHQSTFETMPNGDRMVVMENGRRYAGTPGQIDYRIVEF------ERYAVKVDNKPPE 239 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S E K + + + I +P++ +IA ++ R + + Sbjct: 240 SANEQPPKSRDTFDLLRKPTLENLGELLWRISLPILAFNFVMIAIPLAYVNPRLGRYTPL 299 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 V + +I + +S+ +SG + A + ++L+ + Sbjct: 300 VF-AVLIYLTYSNLINLAQSWVRSGSIPFWLAWWPIHAVAFLAALLMFRYR 349 >gi|154174950|ref|YP_001408879.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92] gi|112803667|gb|EAU01011.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92] Length = 356 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 109/349 (31%), Gaps = 4/349 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY YLK+ L + IDL + N + + + + Sbjct: 8 RYVGWVYLKSFLIVFFALELFYVGIDLLTNLKDLPNSANLQ----LLYVGLTLLSAVSYV 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + I+ N+ R++ELV A+G+S L+ P ++ + V + Sbjct: 64 MPISLVFALIISHINMVRSNELVSFYALGVSKNGLILPPFFIALAVTFLYVGLNCTPFAY 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + + + S + + ++ ++ Sbjct: 124 AYDYQKSIAKNTSFSKSTTDSFLKFEGKFIYIKELSASQKNAKDVRIFDINGTDLLSTTF 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + + + N + K + Q G + + K + + + Sbjct: 184 ADGAKFKNNHWQLQDVNQTLLPKDLRLGQKGLSVQNFDELDALSGFKPKSIESANAADGA 243 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 R F+ K+ ++ FY L + P + L+ R Sbjct: 244 RFSIPDTLDFIFTFKNEGVELDSVKSAFYSLAIAPFFAPFLILVLYYHLPMTGRFFNLAF 303 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +++ ++ ++ F +S ++LP ++PVIL + I +L Sbjct: 304 ASFIFVVITLVIWGVLFVLTRFAQSSVILPEFGIVLPVILLFAYGIYLL 352 >gi|71083417|ref|YP_266136.1| permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|91762160|ref|ZP_01264125.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] gi|71062530|gb|AAZ21533.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|91717962|gb|EAS84612.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 357 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 131/359 (36%), Gaps = 3/359 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ + + L + I++ + ++ E + + S L+ P Sbjct: 1 MKTYIKFLINLFNISLLKIFITFFIIILITNILEQIEFF-KNIDLSFFYLFFLSLLNTPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +I+PFI L+ V F +L +EL + + G++ +++ + S +LGI V+ Sbjct: 60 VLFEILPFIFLLGTQVFFIHLIDKNELQVFKYSGLNNIKIIKILGLYSFILGIIMVIFFY 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ + + + + + + I + D N + + Sbjct: 120 NGSSILKNSYLLIKNNYSGDNKYLAVITENGLWIKDEINDNINIINARQVNNEFLLNVSI 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +K ++ ++ I + K K+ + + G N L+ + Sbjct: 180 TKFNKDFDLVEVLQSERVDITSKKWKIFNPITLK-GNSQSTLNELILHSNFDLQKINSLF 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +S S ++I + S S + + ++ P+ L +T+ +A + Sbjct: 239 SNLSSLSIIDLIT-LRKSYMSLNYSVTDINSHLLKIVSYPVYLTLITIFSAIIMFNIGYQ 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + GIF ++Y I + G + + + +P+I+ ++ + +++ + Sbjct: 298 KNTFYKITLGIFLSVIIYYINNFLSVLGTNEKIPVTLSIFLPLIILSIINFISIIKLNE 356 >gi|227357023|ref|ZP_03841394.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|227162826|gb|EEI47786.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 343 Score = 80.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 114/330 (34%), Gaps = 7/330 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M++ F L EI N + L +P + Q I+P + ++ + L Sbjct: 1 MLIFFSQKLVEILG-AAVEGNIPTNLVVSLLWLGIPEMAQLILPLSLFLGLLMTYSKLYV 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 SE+ + A GI L+ ++ S+L + + + +++ K N Sbjct: 60 ESEITVMNACGIGKKALVQAALLLSLLTSVLAAGNVVWLIPWSSVHQEQVLEDAKANPSL 119 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 + S+ +++G+ K ++ T +++ ++ + N Sbjct: 120 AALMEGQFKMSSDRNMVLYLGSVKGNQFQDVFLAQLRPTQNQRPSVVVADKGYTKELPNG 179 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI 264 + +Y + ++ + + + N+ Sbjct: 180 NQVVVLSEGTRYEGTAVLRDFRITDFTDYQAVIGHRES-----TISRNRVEQKTMNELWH 234 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + +F++ + + +V M L+ +S R + + + + + + + + Sbjct: 235 STEPESIAEFHWRLTLIFSVVIMALMVVPLSEVNPRQGRV-LSMLPAMLLYLVFFLLQSS 293 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILI 354 ++S G+ G + P+ A + +L++L+ Sbjct: 294 LRSSGEKGKVDPLIAMWTVNGIYFALALLL 323 >gi|241668815|ref|ZP_04756393.1| hypothetical protein FphipA2_08605 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877347|ref|ZP_05250057.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843368|gb|EET21782.1| permease [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 360 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 98/349 (28%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + Q I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQQ-AYSQGLGIDSIIKFVILTIPGNV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A G++ Q++ + L I T L + I Sbjct: 61 SLVAPIAIFLAIVICFGKYFANNEMFVTLAGGVTWMQIVKNTMKPVYALTIITFLTVMYI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ ++ + ++ T + Sbjct: 121 NPLSKQTQDIYQASLTAKALLSSITDDKIIKTTDGKVIYIKSKSGNTLKDVFLYMATDNS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + V Y + + F Sbjct: 181 DEYKVVTAPVAEVITDKGAA-YVDFHDAHIYTKEPKTSEY-TYDTAKNAIYTIFDTSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + +F+ I + ++ +L+A ++ R N+ Sbjct: 239 YNHDKVDRLYMHTLIENFTDKDDGTVSRGEFFGRINNSISVIVASLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + G L +P I I +I Sbjct: 299 YAK-LLPSVVVLAVYLCSNMFVNTLMTGGKLPVWIGLWLPHIFFIIYAI 346 >gi|238750167|ref|ZP_04611670.1| Inner membrane protein yjgP [Yersinia rohdei ATCC 43380] gi|238711711|gb|EEQ03926.1| Inner membrane protein yjgP [Yersinia rohdei ATCC 43380] Length = 364 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 121/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIIAALILAVATSALAAVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDEVLNDARANPSLAALAGGQFKSSNDGSSALFIGNVSGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ +I + + + +Y + ++ + Q Sbjct: 181 GNQRPSVIVADSGHMTERPDGSQVVTLNKGTRYEGTALLRDFRITDFVDYQAIIGHKEVQ 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + M +SN +F++ + + + +V M L+ +S+ R + Sbjct: 241 QN--NTVAEQMNMKQLWRSNEPDA---RAEFHWRLTLIVSVVIMALLVVPLSVINPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S SG L P+ + ++L++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNASSGKLDPLVWMWTVNGVYLALAVIL 345 >gi|330827962|ref|YP_004390914.1| putative permease [Aeromonas veronii B565] gi|328803098|gb|AEB48297.1| Predicted permease [Aeromonas veronii B565] Length = 362 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 110/342 (32%), Gaps = 6/342 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 F+ LKT L L +++ +I + + L +P + ++P Sbjct: 1 MFRETLKTQLAVLFVLLLIFVSQQFIKIIGDAAD-GEVPTRLVSTLLLLNLPNMALLMLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + + L SE+ + A+G S ++ ++ ++L + IA + Sbjct: 60 ISLFLAILFAHGRLYAESEMTVMHAVGFSHRFVMRSAMLLALLTAVVAAFNTGWIAPQAK 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + +I ++K + +M + + + + + + + N Sbjct: 120 EREYQVIDEFKADPGISFLQAGRFMDLDK--GRLVAYIQDLNDNGSKLQKIFVLQRAEGN 177 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 A ++ D+ L+ + R + + I + +Q RS Sbjct: 178 NPPSVVVATEGVVTVDENGLQWLTLMDGSRYEGNFSGKQFQISDFREYGLVIRQQEMERS 237 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + + + + + + I +PL + +TL+ ++ R + + Sbjct: 238 NRK--AAAKPTMELFGTQDNAMMAELQWRISLPLSIPVLTLLVVPLARVNPRQGRYAK-L 294 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 I + +++ +S SG L + + + Sbjct: 295 LPAIMLYLSYFLLLSAARSAIDSGRLPYWPGMFLVPLGYLLF 336 >gi|46446270|ref|YP_007635.1| hypothetical protein pc0636 [Candidatus Protochlamydia amoebophila UWE25] gi|46399911|emb|CAF23360.1| hypothetical protein pc0636 [Candidatus Protochlamydia amoebophila UWE25] Length = 360 Score = 80.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 115/356 (32%), Gaps = 2/356 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP-NYSISRGAVLAATRVPLI 62 I RYF ++K L FL+ L +ID + + I + Sbjct: 5 IWERYFVSEFIKVFLLFLVCFYGLYVLIDYASHTSALPHHHIQLRIRELIRYYLFILASR 64 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +IP L+ I LN ELV A GI + L+ PF++ ++ L Sbjct: 65 AEILIPLALLIAFIKTVCTLNTHQELVALMAGGIKLKTLMRPFLMIALAFVCLLYLNEQF 124 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + S K L K +Q +I + + + + + ++ + Sbjct: 125 VLPSTLKKLRHLENATKHQKKRQLPEITV-KHVVLEDRSLLLYQNYDSEKEEFFDVYWIE 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +ID + + + L + + + N+ + Q Sbjct: 184 SIDSIYRAKYLCPNKEIPVGYFVDHLLRQPNGELLQQQAYSQYEFKNLLFNQELLQSAIL 243 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + + + T FY+ +++P + + L A + FSR Sbjct: 244 DPDILPLTNLFFQQPSLFANLSEKESKIATAFYWKLLMPWLCLLAILAPAPSCVRFSRQI 303 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 I Y +F Y ++ + K +L P+ A +P IL S + Sbjct: 304 PIFFIYIYSLFGLIAFYMLMDAAQVLAKRQVLPPIWAIGLPFILVFSFYSYRFARL 359 >gi|146277168|ref|YP_001167327.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] gi|145555409|gb|ABP70022.1| permease YjgP/YjgQ family protein [Rhodobacter sphaeroides ATCC 17025] Length = 376 Score = 80.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 111/343 (32%), Gaps = 9/343 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY + +F L +++ ++ + + + S + +P +I+ Sbjct: 4 FDRYLLSQLVALFGFFSLVLVLVYWINRAVGLFDDLIS-DGQSALVFLEFSLLALPNVIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P I + L++ SELV+ +A G S ++L P ++ +++ + ++++N + Sbjct: 63 LVLPLSAFAATIYIVNRLSQESELVVMQATGFSAFRLARPVILFGLIVAMMMIVLMNLLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + +N + ++ ++I E + Sbjct: 123 PASRATLSARSAEISENATARFLRDGEFLH-PVRGVTLYIREISETGELNDLLLVDDRDR 181 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDGFQK 239 + R+ + ++ + R T ++ M Sbjct: 182 ARSTIYTARRALLVRTETTPRLLMIDGSAQTLTREGRRLELTRFADVTYDLGAFMKSDGP 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLEF 298 S +++ A + + I P + +A +LI A++ L Sbjct: 242 KRRVLEELSTPDLLAPTEALLAETRSTRAAALYEGHSRIAQPFLGLASSLIGFAALLLGS 301 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS-GILLPVAAA 340 + + + ++ TI G + L P+A A Sbjct: 302 FSRFGLWWQILFAVVLLIVVQTINVAASGVGVTDEALWPLAYA 344 >gi|209749454|gb|ACI73034.1| hypothetical protein ECs5238 [Escherichia coli] Length = 366 Score = 80.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPSMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|94985285|ref|YP_604649.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] gi|94555566|gb|ABF45480.1| permease YjgP/YjgQ [Deinococcus geothermalis DSM 11300] Length = 381 Score = 80.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/382 (11%), Positives = 108/382 (28%), Gaps = 34/382 (8%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L + L ++ L + ++P + Sbjct: 4 LTRYVTRELLPPLVAGTLLFTAILSFGYFF---ISSQWLRGVPVGLIGQWIGYQLPDTLV 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +++P +++ +V F L ELV ++ GI + Q+ P V + L+ V + +A Sbjct: 61 KVLPMAVVLMTVVAFGRLATERELVAVQSGGIGLGQVARPVAVVAALVTALAVWLSLWVA 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L + N + ++ + + Sbjct: 121 PRANVETRGLYWDVLTGAGLSQVVGKTVDLGDNLTLWLGGYDAAGRKLQNVRVERWAKDD 180 Query: 185 DKKNKIIHRKDADLAII-------------------------YNDKVKLKKVVEYQYGRI 219 ++ +I + V E + Sbjct: 181 PQRTTVIFADSGTFENNRLSLRGYQVYTVNYAAAARLARVPENDPAAFRTAVQEVFPNVV 240 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE--IIKKMSFSNKSNIFHNYRAE--TQFY 275 + S+TLN+ + Q ++ + + ++ + R + Sbjct: 241 LPEDASSTLNLDTGLSRKQTIAQYADAIGADAEGWPELITKLTAPGVSVQERQDARVNLN 300 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + +P + + L A +L F R + + + Y + + + + L Sbjct: 301 RKLALPFGNLVLALAALPFALRFGR--TLGVSLGIALLIAVAYYLVFFVGLTLAGAFPRL 358 Query: 336 PVAAALIPVILTISLSILILLQ 357 P + ++ L + +L + Sbjct: 359 PEVGVWLANLVFAGLGLWLLRR 380 >gi|206890381|ref|YP_002249742.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742319|gb|ACI21376.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 351 Score = 80.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 120/357 (33%), Gaps = 8/357 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++++ + L+ + ++ + L +++ + +L P Sbjct: 1 MKVIYKALTRELLQNIGLSIAFLNAVLIIEKLF-KLSKIFASVGIDLPNLVLLILLLQPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IP L+ ++ + +E+ I G+ + P + ++ FTVL+ Sbjct: 60 LLIFTIPMALLLSILLTYGRTQADNEMTIFMVSGMPYKKTFKPAIYIGLIAFFFTVLMSF 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +G + + I + + Q L + Sbjct: 120 YLAPTGVSLVREKILTILAERAPLGLEEGVFNQGFKDVTIFVKEKPDSLHLKEVV--IFD 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +I + N + L Y + +++ S I + Sbjct: 178 ERKNDTKIVIAKGGLIKKERDNINLSLLNGKAYFNKGLTLNEVSFKEYIFRLSPNIDPIA 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ + S +E++ K+ I + + Y +PL+ + +A S+ L ++ Sbjct: 238 KKVSELSLFELVSKIQTEEVKAI----DYKLELYKRFALPLLCIVSVFLAPSLCLIVGKT 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + G+ Y ++ + K+G + +L+PVI+ L+ + + Sbjct: 294 GRIG-GITVGLAIFAFYYILMIYGANLAKAGKVSAEIGSLLPVIVMAILAFTMYTRI 349 >gi|51473938|ref|YP_067695.1| hypothetical protein RT0756 [Rickettsia typhi str. Wilmington] gi|51460250|gb|AAU04213.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 362 Score = 80.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 147/357 (41%), Gaps = 5/357 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L Y K Y K L ++L+ + ++ ++ + + S ++P + Sbjct: 5 KTLSLYLTKLYSKCFFIILFLLIVLLIISNIFDLLQKFKNIY-VPFSFFWRFILYKIPYL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q+ I+ + NL +++EL+ + GI IWQ+L + +++LGI ++NP Sbjct: 64 LTQVSSLISFTSMLFFLRNLTKSNELIAILSSGIHIWQVLIIPCIVTLILGIICTTLLNP 123 Query: 123 IATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I+T G + L + S+ S + + I + I + T Sbjct: 124 ISTIGLQKYAILEAKLTKKALSGGLISESGLLFFESLNEHNQIIQTQFIDVAEQKLNNIT 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ID N + R DA II N K+ L +V N+ T+ + ++ Sbjct: 184 ILFIDNNNSFLKRIDALYGIIKNKKLYLNRVKV-SMKDETKSYNNLTIQTNLSINSLVNK 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S + + K ++ S + +Y + P+M++A ++A+ R Sbjct: 243 FMRPEMVSIWALPKLINELLNSG-LSAINYQIYYYKQLFKPIMMMATVILASCFISLKQR 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 N I+ G+FSGF+ Y++ I+ L +AA L+P +L +S I+L Sbjct: 302 CNAQEKILILGLFSGFIAYSLSEILLKILTYNNLSLIAAILLPSLLIFFISNFIILH 358 >gi|258405420|ref|YP_003198162.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] gi|257797647|gb|ACV68584.1| permease YjgP/YjgQ family protein [Desulfohalobium retbaense DSM 5692] Length = 395 Score = 80.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 119/365 (32%), Gaps = 12/365 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 +P L R FK + L + + ++ ++ + ++ L P Sbjct: 2 LPRRLSREIFKELVYVFSLCLGSFLA-LLLVGRLLKLRELFLSQDVALLDLGQLFLYLSP 60 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P +++ + F ++ ELV RA G+S+WQLL ++ +L + + Sbjct: 61 FFLLLLLPIASMLSVFLTFLRMSTDRELVALRAAGLSLWQLLPVTLLFLLLCTAANIGIG 120 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + G I + + Q + + Sbjct: 121 IYGVSWGMDNFRATILDMAKTRTQLVLQPGVFNQDFPGLTIFARQVDRETGDLSTVFVED 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDK--VKLKKVVEYQYGRIPID-KNSTTLNIPIKMDGF 237 + I+ + + + L+ Y++ R I + +D Sbjct: 181 TSRGQGAIGIVAPQGSLTTDTRKGQVVFSLRNGRLYRHDRDSASVLGFGEYRIALDLDKI 240 Query: 238 -------QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 +K ++ + + + + + + + + + + + +PL +A+ + Sbjct: 241 ISGVELEEKRPKEMSWTRLMDYRHQADLAQTRDATFDRKVDVETHKRLALPLACLALGIF 300 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A ++ F + + + Y + + S G++G L P P IL + L Sbjct: 301 AMPLAALFEGLKRH-FGFLVSLGLFLVYYALFSAGLSLGETGTLAPAIGLWAPNILFMGL 359 Query: 351 SILIL 355 ++ Sbjct: 360 GGILF 364 >gi|254481219|ref|ZP_05094464.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] gi|214038382|gb|EEB79044.1| putative permease, YjgP/YjgQ family [marine gamma proteobacterium HTCC2148] Length = 369 Score = 80.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 114/358 (31%), Gaps = 10/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY L + ++++ + + + + + + R+P Sbjct: 1 MKIL-RYLALDVLVHMVAVSFVLLVIIISGRFVKYLAEAA-VGDLAAGILVPVLLYRLPG 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IIP + ++ + L SE+VI A GIS +L +V ++L+ + + Sbjct: 59 FMELIIPLGLFIGILMSYGRLYVESEMVIFTATGISPQRLAGYTLVPALLVMVIVGGLSL 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I+ G L+ + + + + + A H + Sbjct: 119 FISPLGAARSEALLHAPESSQGINALAAGRFQTRRSNDMVSYAQAVDANGVMHSVFLSQA 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + A + D + +E + G + + + F + Sbjct: 179 EREDDGELTMLLTIASEGEVKFDSATGARYLELRNGVRYVGYPGDLDYQVVSFEQFGELI 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + ++ + IP+M+ + +IA +S R Sbjct: 239 PEPEGGVRTADPVDGRTTAHLLSSELLEDKAALHWRLSIPVMVPIVAIIAMCMSHTNHRR 298 Query: 302 NQPRIIVAYGIFSGFMLYTII---TIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + I +A T++ + G+ G + L +++++ +L Sbjct: 299 GRY-IKMAPAFILYLGYLTLLANARSGIASGEGGTVN----IWAVHALFLAVALAMLY 351 >gi|157157059|ref|YP_001465770.1| putaitve permease [Escherichia coli E24377A] gi|157079089|gb|ABV18797.1| putaitve permease [Escherichia coli E24377A] Length = 366 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIIL 345 >gi|167626384|ref|YP_001676884.1| hypothetical protein Fphi_0162 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596385|gb|ABZ86383.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 360 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 99/349 (28%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + Q I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQQ-AYSQGLGIDSIIKFVILTIPGNV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A G++ Q++ + L I T L + I Sbjct: 61 SLVAPIAIFLAIVICFGKYFANNEMFVTLAGGVTWMQIVKNTMKPVYALTIITFLTVMYI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ ++ + ++ T + Sbjct: 121 NPLSKQTQDIYQASLTAKALLSSITDDKIIKTTDGKVIYIKSKSGNTLKDVFLYMATDNS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + V Y + + F Sbjct: 181 DEYKVVTAPVAEVIIDKGAA-YVDFHDAHIYTKEPKTYEH-TYDTAKNAIYTIFDTSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + +F+ I + ++ +L+A ++ R N+ Sbjct: 239 YNHDKVDRLYMHTLIENFTDKDDGTVSRGEFFGRINNSISVIVASLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + G L +P I I +I Sbjct: 299 YAK-LLPSVVVLAVYLCSNMFVNTLMTGGKLPVWIGLWLPHIFFIIYAI 346 >gi|254374090|ref|ZP_04989572.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3548] gi|151571810|gb|EDN37464.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3548] Length = 360 Score = 80.1 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 34/349 (9%), Positives = 99/349 (28%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIVICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 121 NPLSKQTLDIYKASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F+ I + ++ +L+A ++ R N+ Sbjct: 239 YNHDRVDRLYMHTLIENFNDKANGTAYKAEFFGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + +G + +P I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMANGSVPVWIGFWLPHIFFTIFAV 346 >gi|332296606|ref|YP_004438529.1| permease YjgP/YjgQ family protein [Thermodesulfobium narugense DSM 14796] gi|332179709|gb|AEE15398.1| permease YjgP/YjgQ family protein [Thermodesulfobium narugense DSM 14796] Length = 365 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 120/363 (33%), Gaps = 11/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 + + W Y K +L + LL L+ + + + S GA LAA +P Sbjct: 5 LNKLFWSYILKDFLPFFFFGLLAFSGLMLAGESMRTIKLVADNQG-SFLTGAKLAACGLP 63 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P TL+ ++ ++ ELV R+ G+SI++ PF++ I+ + Sbjct: 64 YSIAFAFPMATLLGVLMAVSRISSNWELVALRSAGLSIFKFSLPFIIIGIIFSTVSFFTF 123 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A +I + + + + + Q FI K + Sbjct: 124 EKLAYPLLDKSRYIIAKDLKKELNTERQNVLFKLPPDSPQPKFIIFAKDYKPATMSLQDV 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM------ 234 I + + ++ K + Y++ + I I Sbjct: 184 YIQEFDNEFLKRTIYSSELSFTGNRWVASKGLSYEFSKDGIIVGRLDFEKLIVPLGVLPQ 243 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 +++ SF+E++ +S S Y Y + +P A I + Sbjct: 244 TVKALPTKKPRDMSFFELLSYLSNSKDIVDKSLY---VDLYNKLSLPFACFAFACIGVAF 300 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + R + I I + Y I ++ + G L P A+ IL I + Sbjct: 301 GIASERKSS-AIGFGIAITTVLFYYLIFSLFTTLGYMSYLPPFIASFGADILITIFGIFM 359 Query: 355 LLQ 357 +++ Sbjct: 360 VVK 362 >gi|15804853|ref|NP_290894.1| hypothetical protein Z5873 [Escherichia coli O157:H7 EDL933] gi|15834492|ref|NP_313265.1| hypothetical protein ECs5238 [Escherichia coli O157:H7 str. Sakai] gi|16132083|ref|NP_418682.1| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|26251170|ref|NP_757210.1| hypothetical protein c5362 [Escherichia coli CFT073] gi|30065452|ref|NP_839623.1| hypothetical protein S4489 [Shigella flexneri 2a str. 2457T] gi|56480551|ref|NP_709940.2| hypothetical protein SF4228 [Shigella flexneri 2a str. 301] gi|82546486|ref|YP_410433.1| hypothetical protein SBO_4179 [Shigella boydii Sb227] gi|89110977|ref|AP_004757.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|91213817|ref|YP_543803.1| hypothetical protein UTI89_C4868 [Escherichia coli UTI89] gi|110644620|ref|YP_672350.1| putative membrane protein YjgP [Escherichia coli 536] gi|117626605|ref|YP_859928.1| hypothetical protein APECO1_2133 [Escherichia coli APEC O1] gi|157163736|ref|YP_001461054.1| putative permease [Escherichia coli HS] gi|168749567|ref|ZP_02774589.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|168754843|ref|ZP_02779850.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|168760516|ref|ZP_02785523.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|168766552|ref|ZP_02791559.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC4486] gi|168774017|ref|ZP_02799024.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|168782788|ref|ZP_02807795.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|168784911|ref|ZP_02809918.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC869] gi|168797841|ref|ZP_02822848.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|170021731|ref|YP_001726685.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|170083700|ref|YP_001733020.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681521|ref|YP_001746665.1| putative permease [Escherichia coli SMS-3-5] gi|191170651|ref|ZP_03032203.1| putative permease [Escherichia coli F11] gi|193063666|ref|ZP_03044754.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|193069837|ref|ZP_03050787.1| putative permease [Escherichia coli E110019] gi|195937287|ref|ZP_03082669.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807252|ref|ZP_03249589.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208812743|ref|ZP_03254072.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208819114|ref|ZP_03259434.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209395855|ref|YP_002273806.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|209921758|ref|YP_002295842.1| hypothetical protein ECSE_4567 [Escherichia coli SE11] gi|215489603|ref|YP_002332034.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|217324429|ref|ZP_03440513.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218556808|ref|YP_002389722.1| hypothetical protein ECIAI1_4492 [Escherichia coli IAI1] gi|218561419|ref|YP_002394332.1| hypothetical protein ECS88_4848 [Escherichia coli S88] gi|218698009|ref|YP_002405676.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218707867|ref|YP_002415386.1| hypothetical protein ECUMN_4793 [Escherichia coli UMN026] gi|227886685|ref|ZP_04004490.1| inner membrane protein [Escherichia coli 83972] gi|237703936|ref|ZP_04534417.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238903362|ref|YP_002929158.1| conserved inner membrane protein [Escherichia coli BW2952] gi|253775116|ref|YP_003037947.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164186|ref|YP_003047296.1| inner membrane protein [Escherichia coli B str. REL606] gi|254796281|ref|YP_003081118.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256019913|ref|ZP_05433778.1| conserved inner membrane protein [Shigella sp. D9] gi|260847092|ref|YP_003224870.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260871013|ref|YP_003237415.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261225380|ref|ZP_05939661.1| conserved inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255367|ref|ZP_05947900.1| inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291285673|ref|YP_003502491.1| Inner membrane protein yjgP [Escherichia coli O55:H7 str. CB9615] gi|293402886|ref|ZP_06646983.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1412] gi|293407981|ref|ZP_06651821.1| conserved hypothetical protein [Escherichia coli B354] gi|293417761|ref|ZP_06660383.1| lipopolysaccharide export system permease lptF [Escherichia coli B185] gi|293476564|ref|ZP_06664972.1| lipopolysaccharide export system permease lptF [Escherichia coli B088] gi|297519576|ref|ZP_06937962.1| Inner membrane protein yjgP [Escherichia coli OP50] gi|298378412|ref|ZP_06988296.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1302] gi|300818514|ref|ZP_07098723.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300821368|ref|ZP_07101516.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300899411|ref|ZP_07117666.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300906109|ref|ZP_07123828.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300923939|ref|ZP_07139949.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300950209|ref|ZP_07164150.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300957116|ref|ZP_07169357.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300972386|ref|ZP_07171919.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300988161|ref|ZP_07178581.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|301024383|ref|ZP_07188071.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|301050053|ref|ZP_07196965.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|301304686|ref|ZP_07210794.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301643391|ref|ZP_07243441.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|306815521|ref|ZP_07449670.1| Inner membrane protein yjgP [Escherichia coli NC101] gi|307140956|ref|ZP_07500312.1| Inner membrane protein yjgP [Escherichia coli H736] gi|309792902|ref|ZP_07687330.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|331645010|ref|ZP_08346127.1| inner membrane protein YjgP [Escherichia coli H736] gi|331650394|ref|ZP_08351466.1| inner membrane protein YjgP [Escherichia coli M605] gi|331656095|ref|ZP_08357083.1| inner membrane protein YjgP [Escherichia coli M718] gi|331660842|ref|ZP_08361774.1| inner membrane protein YjgP [Escherichia coli TA206] gi|331665930|ref|ZP_08366824.1| inner membrane protein YjgP [Escherichia coli TA143] gi|331671402|ref|ZP_08372200.1| inner membrane protein YjgP [Escherichia coli TA280] gi|331680399|ref|ZP_08381058.1| inner membrane protein YjgP [Escherichia coli H591] gi|331681281|ref|ZP_08381918.1| inner membrane protein YjgP [Escherichia coli H299] gi|332281053|ref|ZP_08393466.1| conserved hypothetical protein [Shigella sp. D9] gi|84027984|sp|P0AFA0|LPTF_ECO57 RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027985|sp|P0AF99|LPTF_ECOL6 RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027986|sp|P0AF98|LPTF_ECOLI RecName: Full=Lipopolysaccharide export system permease protein lptF gi|84027987|sp|P0AFA1|LPTF_SHIFL RecName: Full=Lipopolysaccharide export system permease protein lptF gi|12519273|gb|AAG59460.1|AE005658_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26111602|gb|AAN83784.1|AE016771_295 Hypothetical protein yjgP [Escherichia coli CFT073] gi|537103|gb|AAA97158.1| ORF_o366 [Escherichia coli str. K-12 substr. MG1655] gi|1790712|gb|AAC77218.1| lipopolysaccharide export ABC permease of the LptBFGC export complex [Escherichia coli str. K-12 substr. MG1655] gi|13364716|dbj|BAB38661.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|30043716|gb|AAP19435.1| hypothetical protein S4489 [Shigella flexneri 2a str. 2457T] gi|31323180|gb|AAP43524.1| YjgP [Escherichia coli B] gi|56384102|gb|AAN45647.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|81247897|gb|ABB68605.1| conserved hypothetical protein [Shigella boydii Sb227] gi|85677008|dbj|BAE78258.1| conserved inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|91075391|gb|ABE10272.1| hypothetical protein UTI89_C4868 [Escherichia coli UTI89] gi|110346212|gb|ABG72449.1| putative membrane protein YjgP [Escherichia coli 536] gi|115515729|gb|ABJ03804.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157069416|gb|ABV08671.1| putative permease [Escherichia coli HS] gi|169756659|gb|ACA79358.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|169891535|gb|ACB05242.1| conserved inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170519239|gb|ACB17417.1| putative permease [Escherichia coli SMS-3-5] gi|187770319|gb|EDU34163.1| putative permease [Escherichia coli O157:H7 str. EC4196] gi|188016154|gb|EDU54276.1| putative permease [Escherichia coli O157:H7 str. EC4113] gi|188999811|gb|EDU68797.1| putative permease [Escherichia coli O157:H7 str. EC4076] gi|189357793|gb|EDU76212.1| putative permease [Escherichia coli O157:H7 str. EC4401] gi|189364084|gb|EDU82503.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC4486] gi|189368987|gb|EDU87403.1| putative permease [Escherichia coli O157:H7 str. EC4501] gi|189374999|gb|EDU93415.1| putative permease, YjgP/YjgQ family [Escherichia coli O157:H7 str. EC869] gi|189379426|gb|EDU97842.1| putative permease [Escherichia coli O157:H7 str. EC508] gi|190908875|gb|EDV68462.1| putative permease [Escherichia coli F11] gi|192930653|gb|EDV83259.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|192956891|gb|EDV87344.1| putative permease [Escherichia coli E110019] gi|208727053|gb|EDZ76654.1| putative permease [Escherichia coli O157:H7 str. EC4206] gi|208734020|gb|EDZ82707.1| putative permease [Escherichia coli O157:H7 str. EC4045] gi|208739237|gb|EDZ86919.1| putative permease [Escherichia coli O157:H7 str. EC4042] gi|209157255|gb|ACI34688.1| putative permease [Escherichia coli O157:H7 str. EC4115] gi|209749448|gb|ACI73031.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749450|gb|ACI73032.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749452|gb|ACI73033.1| hypothetical protein ECs5238 [Escherichia coli] gi|209749456|gb|ACI73035.1| hypothetical protein ECs5238 [Escherichia coli] gi|209915017|dbj|BAG80091.1| conserved hypothetical protein [Escherichia coli SE11] gi|215267675|emb|CAS12133.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|217320650|gb|EEC29074.1| putative permease [Escherichia coli O157:H7 str. TW14588] gi|218354741|emb|CAV01804.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218363577|emb|CAR01234.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|218368188|emb|CAR05996.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218434964|emb|CAR15905.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|222036033|emb|CAP78778.1| Inner membrane protein yjgP [Escherichia coli LF82] gi|226901848|gb|EEH88107.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227836258|gb|EEJ46724.1| inner membrane protein [Escherichia coli 83972] gi|238860249|gb|ACR62247.1| conserved inner membrane protein [Escherichia coli BW2952] gi|242379781|emb|CAQ34608.1| LptF, subunit of LptABCFG ABC transporter [Escherichia coli BL21(DE3)] gi|253326160|gb|ACT30762.1| permease YjgP/YjgQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976089|gb|ACT41760.1| conserved inner membrane protein [Escherichia coli B str. REL606] gi|253980245|gb|ACT45915.1| conserved inner membrane protein [Escherichia coli BL21(DE3)] gi|254595681|gb|ACT75042.1| conserved inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257762239|dbj|BAI33736.1| inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257767369|dbj|BAI38864.1| inner membrane protein [Escherichia coli O111:H- str. 11128] gi|281181359|dbj|BAI57689.1| conserved hypothetical protein [Escherichia coli SE15] gi|281603540|gb|ADA76524.1| hypothetical protein SFxv_4611 [Shigella flexneri 2002017] gi|290765546|gb|ADD59507.1| Inner membrane protein yjgP [Escherichia coli O55:H7 str. CB9615] gi|291321017|gb|EFE60459.1| lipopolysaccharide export system permease lptF [Escherichia coli B088] gi|291429801|gb|EFF02815.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1412] gi|291430479|gb|EFF03477.1| lipopolysaccharide export system permease lptF [Escherichia coli B185] gi|291472232|gb|EFF14714.1| conserved hypothetical protein [Escherichia coli B354] gi|294490862|gb|ADE89618.1| putative permease [Escherichia coli IHE3034] gi|298280746|gb|EFI22247.1| lipopolysaccharide export system permease lptF [Escherichia coli FVEC1302] gi|300298211|gb|EFJ54596.1| putative inner membrane protein [Escherichia coli MS 185-1] gi|300305971|gb|EFJ60491.1| putative inner membrane protein [Escherichia coli MS 200-1] gi|300316134|gb|EFJ65918.1| putative inner membrane protein [Escherichia coli MS 175-1] gi|300356989|gb|EFJ72859.1| putative inner membrane protein [Escherichia coli MS 198-1] gi|300396609|gb|EFJ80147.1| putative inner membrane protein [Escherichia coli MS 69-1] gi|300402052|gb|EFJ85590.1| putative inner membrane protein [Escherichia coli MS 84-1] gi|300410965|gb|EFJ94503.1| putative inner membrane protein [Escherichia coli MS 45-1] gi|300419817|gb|EFK03128.1| putative inner membrane protein [Escherichia coli MS 182-1] gi|300450449|gb|EFK14069.1| putative inner membrane protein [Escherichia coli MS 116-1] gi|300526257|gb|EFK47326.1| putative inner membrane protein [Escherichia coli MS 119-7] gi|300528918|gb|EFK49980.1| putative inner membrane protein [Escherichia coli MS 107-1] gi|300840036|gb|EFK67796.1| putative inner membrane protein [Escherichia coli MS 124-1] gi|301078221|gb|EFK93027.1| putative inner membrane protein [Escherichia coli MS 146-1] gi|305851183|gb|EFM51638.1| Inner membrane protein yjgP [Escherichia coli NC101] gi|307556431|gb|ADN49206.1| putative membrane protein YjgP [Escherichia coli ABU 83972] gi|307629337|gb|ADN73641.1| Inner membrane protein yjgP [Escherichia coli UM146] gi|308123188|gb|EFO60450.1| putative inner membrane protein [Escherichia coli MS 145-7] gi|309704765|emb|CBJ04116.1| putative permease [Escherichia coli ETEC H10407] gi|312948914|gb|ADR29741.1| inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|315255620|gb|EFU35588.1| putative inner membrane protein [Escherichia coli MS 85-1] gi|315288386|gb|EFU47784.1| putative inner membrane protein [Escherichia coli MS 110-3] gi|315293628|gb|EFU52980.1| putative inner membrane protein [Escherichia coli MS 153-1] gi|315298978|gb|EFU58232.1| putative inner membrane protein [Escherichia coli MS 16-3] gi|320639018|gb|EFX08664.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H7 str. G5101] gi|320644388|gb|EFX13453.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H- str. 493-89] gi|320649705|gb|EFX18229.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H- str. H 2687] gi|320655102|gb|EFX23063.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660608|gb|EFX28069.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O55:H7 str. USDA 5905] gi|320665535|gb|EFX32581.1| lipopolysaccharide ABC transporter permease LptF [Escherichia coli O157:H7 str. LSU-61] gi|323380352|gb|ADX52620.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] gi|323935383|gb|EGB31731.1| inner membrane protein yjgP [Escherichia coli E1520] gi|323950670|gb|EGB46548.1| inner membrane protein yjgP [Escherichia coli H252] gi|323955547|gb|EGB51311.1| inner membrane protein yjgP [Escherichia coli H263] gi|323965650|gb|EGB61104.1| inner membrane protein yjgP [Escherichia coli M863] gi|323975396|gb|EGB70497.1| inner membrane protein yjgP [Escherichia coli TW10509] gi|324013725|gb|EGB82944.1| putative inner membrane protein [Escherichia coli MS 60-1] gi|324019238|gb|EGB88457.1| putative inner membrane protein [Escherichia coli MS 117-3] gi|324118822|gb|EGC12714.1| inner membrane protein yjgP [Escherichia coli E1167] gi|331035985|gb|EGI08223.1| inner membrane protein YjgP [Escherichia coli H736] gi|331040788|gb|EGI12946.1| inner membrane protein YjgP [Escherichia coli M605] gi|331046449|gb|EGI18539.1| inner membrane protein YjgP [Escherichia coli M718] gi|331051884|gb|EGI23923.1| inner membrane protein YjgP [Escherichia coli TA206] gi|331056981|gb|EGI28975.1| inner membrane protein YjgP [Escherichia coli TA143] gi|331071247|gb|EGI42604.1| inner membrane protein YjgP [Escherichia coli TA280] gi|331071862|gb|EGI43198.1| inner membrane protein YjgP [Escherichia coli H591] gi|331081502|gb|EGI52663.1| inner membrane protein YjgP [Escherichia coli H299] gi|332103405|gb|EGJ06751.1| conserved hypothetical protein [Shigella sp. D9] Length = 366 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|194437844|ref|ZP_03069939.1| putative permease [Escherichia coli 101-1] gi|256025197|ref|ZP_05439062.1| hypothetical protein E4_17633 [Escherichia sp. 4_1_40B] gi|260858413|ref|YP_003232304.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|301325194|ref|ZP_07218718.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|331671169|ref|ZP_08372002.1| inner membrane protein YjgP [Escherichia coli TA271] gi|194423340|gb|EDX39332.1| putative permease [Escherichia coli 101-1] gi|257757062|dbj|BAI28564.1| inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|300847955|gb|EFK75715.1| putative inner membrane protein [Escherichia coli MS 78-1] gi|323945994|gb|EGB42032.1| inner membrane protein yjgP [Escherichia coli H120] gi|323970485|gb|EGB65744.1| inner membrane protein yjgP [Escherichia coli TA007] gi|331061758|gb|EGI33684.1| inner membrane protein YjgP [Escherichia coli TA271] Length = 366 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMCTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|118497255|ref|YP_898305.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|194323557|ref|ZP_03057334.1| putative permease, YjgP/YjgQ family [Francisella tularensis subsp. novicida FTE] gi|208779048|ref|ZP_03246394.1| putative permease, YjgP/YjgQ family [Francisella novicida FTG] gi|254372628|ref|ZP_04988117.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. novicida GA99-3549] gi|118423161|gb|ABK89551.1| conserved membrane protein of unknown function [Francisella novicida U112] gi|151570355|gb|EDN36009.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3549] gi|194322412|gb|EDX19893.1| putative permease, YjgP/YjgQ family [Francisella tularensis subsp. novicida FTE] gi|208744848|gb|EDZ91146.1| putative permease, YjgP/YjgQ family [Francisella novicida FTG] Length = 360 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 34/349 (9%), Positives = 99/349 (28%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIVICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 121 NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F+ I + ++ +L+A ++ R N+ Sbjct: 239 YNHDRVDRLYMHTLIENFNDKTNGTAYKAEFFGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + +G + +P I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMANGSVPVWIGFWLPHIFFTIFAV 346 >gi|311281181|ref|YP_003943412.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] gi|308750376|gb|ADO50128.1| permease YjgP/YjgQ family protein [Enterobacter cloacae SCF1] Length = 366 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 121/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ GI L + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILALFTGIVAALNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q S+ +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNSVLFIESVDGKKFRDVFLAQIRTK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ ++ + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGNITQQKDGSQVVHLNEGTRFEGTAMLRDFRVTDFKNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + A + ++ + + + M L+ +S+ R + Sbjct: 236 HQTVSLDPSDTEQMNMLTLWNTDTNGARAELHWRLTLVATVFIMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T ++S G+ G L P+ + +L +L++ + Sbjct: 296 V-LSMLPAMLLYLVFFLLQTSIRSNGEKGKLDPMVWMWVVNLLYFALAVAL 345 >gi|46143410|ref|ZP_00135308.2| COG0795: Predicted permeases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208575|ref|YP_001053800.1| hypothetical protein APL_1103 [Actinobacillus pleuropneumoniae L20] gi|307246019|ref|ZP_07528101.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248123|ref|ZP_07530151.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250354|ref|ZP_07532303.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252738|ref|ZP_07534629.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255000|ref|ZP_07536818.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257154|ref|ZP_07538926.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259436|ref|ZP_07541161.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261582|ref|ZP_07543250.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263771|ref|ZP_07545377.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097367|gb|ABN74195.1| hypothetical protein APL_1103 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306852954|gb|EFM85177.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855300|gb|EFM87475.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857629|gb|EFM89736.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859770|gb|EFM91792.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861873|gb|EFM93849.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864316|gb|EFM96227.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866372|gb|EFM98235.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868705|gb|EFN00514.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870892|gb|EFN02630.1| Lipopolysaccharide export system permease protein lptF [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 343 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 101/328 (30%), Gaps = 7/328 (2%) Query: 27 LVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTS 86 + F L + N L +P + Q ++P V ++ S Sbjct: 1 MFFSQQLITVLNSAVS-GKVPTDLVLSLLGLGMPALAQFMLPLSLFVALLLTLGRFYAES 59 Query: 87 ELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQK 146 E+ + RA GI L SI V + + +++ + K N Sbjct: 60 EITVMRACGIGKSLLTKVAFFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKSNPRFSA 119 Query: 147 SDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKV 206 +M + + I E + D D++ K + Sbjct: 120 LSAGQFMTAGG----YVLFIENINNEQNKLNDIYVFQPDQQKKNRPSVVVAESGQLQGLP 175 Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 +++ + + D +Q + S +++++ F+ Sbjct: 176 NGDQILTLENSTRYEGTANVADFRISHFDSYQAYLGYQDVDSNEKLVQRADFNKLMADQS 235 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 A+ + + + L + M L+A +S R + V + + + + + +K Sbjct: 236 -NEAKAELQWRFALILAVPLMALLAVPMSSVNPRQGRFAK-VIPAVLLYLIYFLLQSSLK 293 Query: 327 SFGKSGILLPVAAALIPVILTISLSILI 354 S G SG L + I L++++ Sbjct: 294 SSGASGKLDATLLMPLVSIAFFILAMVM 321 >gi|319760186|ref|YP_004124124.1| putative permease [Candidatus Blochmannia vafer str. BVAF] gi|318038900|gb|ADV33450.1| putative permease [Candidatus Blochmannia vafer str. BVAF] Length = 363 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 120/358 (33%), Gaps = 2/358 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y K L + L + L +I L + E YSI +P Sbjct: 1 MHKILDMYIKKSILSSISIVFLILISLSSIIRLIDGLRNF-EKKTYSIIEIFFCTFLSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ ++ L +ELVI + G+S +Q+ V S+ + I +++ Sbjct: 60 KDFELFLPISILLGGLLGLGVLEIRNELVIMKVFGLSYFQITFSVVKVSVFILILHIMLN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + N I N + + Sbjct: 120 EWLLPGSQYMLYIYQGHKEYNSYFFPEKNKNLWIIDNNGFVCIEYMPTTNNVFGVNLYYL 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + I + + + ++ + + N + D Sbjct: 180 TKDKKIEKIIYFKDATYINKSWFVSSAIELNFSDKTHIVNRTVFHYKWNTILTPDLLSII 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + S ++ + + N N Y E F+ I+ PL + M +I+ S Sbjct: 240 TTNPRVLSVSKLFSCIKYFNGINQNSQY-YELIFWNKILSPLTGMIMLIISLLYSFGPFS 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + +G GF+ Y + F + P+ ++IPV+L I ++I+I+ K Sbjct: 299 KKKIGFRLFFGSIIGFLFYVLHQFFDVFCVMHNIYPLVGSIIPVLLFIVINIVIVFYK 356 >gi|225848308|ref|YP_002728471.1| permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] gi|225643577|gb|ACN98627.1| putative permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] Length = 355 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 126/361 (34%), Gaps = 15/361 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY ++ L ++ ++L EI + + + ++P Sbjct: 1 MKILDRYIYEKLTVYFLIVFPAFSLVSVFVELIEILRK---SKVQDFNLILIYILAKLPE 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+P ++ VV + ++ E+ GISI + V+ SI + VL + Sbjct: 58 NFYYIVPISLIISAFVVANEIVKSREIYPILLNGISINYISTRIVIFSIFISFLQVLNLE 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K+ ++ Q N + I + + FI E + ++ Sbjct: 118 VLMPKSNKVYVET-YQKLKNQPLEDEKAIAYNLWLRLDEKNFIYFDFFDLEKKVGKEIVL 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGF 237 I++D+ +R +A+ + ++ + L + E I + + + + + Sbjct: 177 ISMDENFLPTNRWEAESFKVESNSLTLLRGKEITVKSIEDVKVSKFDEKKVYVSVDPEKI 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 +K ++ S ++ K + + ++FY + + +T+ A Sbjct: 237 KKLIKEKKPVSITQLYKVAKIAQNYG-YDASYFWSKFYQKLATVISPFILTVFAVGFIWR 295 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ I G S + + +I+ + G + +L +S+ ++ + Sbjct: 296 KNK-----FITLAGFLSTVLYWYGTSIVSAIASVGNIPYYF-IFSFDVLFLSIGFYLMFK 349 Query: 358 K 358 Sbjct: 350 T 350 >gi|126739399|ref|ZP_01755092.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] gi|126719499|gb|EBA16208.1| hypothetical protein RSK20926_20820 [Roseobacter sp. SK209-2-6] Length = 376 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 114/356 (32%), Gaps = 9/356 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY YL +F L + + +V + +++ S A +P +I+ Sbjct: 5 DRYVLSQYLLFFGFFALILVAVFWVNRAVVLFDRLIG-DGQSALVFVEFTALTLPNLIRM 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P ++ V L SEL + RA G S WQ+ P +V ++ + + + + Sbjct: 64 VLPVAVFASSVWVTNRLQSESELTVLRATGTSPWQMARPALVFGLVAALMMSALTHVLLP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW----EDFTS 181 + ++ N + ++ + + ++ D S Sbjct: 124 ASISQLEIREREVSRNVTARLLTEGNFLHPAKGITFYIRKIESDGTLKDVFLSDRRDPNS 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ +D + + ++ + + + + +I S Sbjct: 184 SVTYTGSEAFLVRDGEKTHLIMVNGMAQRFTKDTRRLSTTNFSDFSYDISALARKSADRS 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EFS 299 + EI+ ++ + + + L+ V + LI S + FS Sbjct: 244 RNIRAIPSLEILTAREQITNTDGYSAGALAEELHLRFARALVCVTVALIGFSALMLGTFS 303 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R R + + + + + K L P+ +P + + ++ L Sbjct: 304 RFGVWRQALLAFLLLILVEGLRGVVSEPVLKDPTLWPLI--YLPAVTGLIIAAGFL 357 >gi|157368808|ref|YP_001476797.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] gi|157320572|gb|ABV39669.1| permease YjgP/YjgQ family protein [Serratia proteamaculans 568] Length = 364 Score = 80.1 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 125/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F +L + + + + L A VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFCQNLVRVLGDAVD-GDVPTNLVLSLLALGVPKMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ +V ++ + + + Sbjct: 61 QLILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALFTSVIAAANVFWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ + K N + + +FIG K N+++ Sbjct: 121 GPWASRYQDVVVSEAKANPSIAGLAEGQFKTSQDGNAVLFIGNVKGSTFNNVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + + + + ++ + ++ + + Sbjct: 181 GNQRPSVVVAEHGQINQMKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAVVGHRAVT 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + A +F++ + + L +V M L+ +S+ R + Sbjct: 241 VDGNQAEQM-----SMKTLLASDDPDARAEFHWRLTLVLSVVIMALLVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + + + T ++S G G L P+ + ++++ + Sbjct: 296 V-LSMLPAILLYLIFFLLQTSLRSNGGKGKLDPMVWLWVVNAAYFAIALAL 345 >gi|163853056|ref|YP_001641099.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218531866|ref|YP_002422682.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254562993|ref|YP_003070088.1| permease [Methylobacterium extorquens DM4] gi|163664661|gb|ABY32028.1| permease YjgP/YjgQ family protein [Methylobacterium extorquens PA1] gi|218524169|gb|ACK84754.1| permease YjgP/YjgQ family protein [Methylobacterium chloromethanicum CM4] gi|254270271|emb|CAX26267.1| putative permease [Methylobacterium extorquens DM4] Length = 389 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 107/356 (30%), Gaps = 6/356 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ L L L+G ++V + + ++ + A +P +I Sbjct: 4 IERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAK-GQTLLVFLFITALSLPTLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I P + + LN SEL++ A G+ QLL PF + + + + + Sbjct: 63 VIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQVM 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 S + D++ + + + + + N F ++ Sbjct: 123 PSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKREAG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGFQKF 240 + R V K + Q +++ + Sbjct: 183 KAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDSET 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + RS ++ R + + + L +A+ IA + + Sbjct: 243 VYKPRERSTMALL-FPDTGEGYYRLQKGRFRAELHDRLSAWLYPLALAFIAFAALGDPRT 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + Q R + G G + I S V A + I+LS L++ Sbjct: 302 TRQGRGLAVAGAVVGVIALRIAGFAASSAAVRSPGAVVAIYAAPLGAIALSCLLIF 357 >gi|83746689|ref|ZP_00943738.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|207721411|ref|YP_002251852.1| permease protein [Ralstonia solanacearum MolK2] gi|207742608|ref|YP_002259000.1| permease protein [Ralstonia solanacearum IPO1609] gi|83726642|gb|EAP73771.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|206586570|emb|CAQ17157.1| permease protein [Ralstonia solanacearum MolK2] gi|206594002|emb|CAQ60929.1| permease protein [Ralstonia solanacearum IPO1609] Length = 387 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 35/350 (10%), Positives = 103/350 (29%), Gaps = 10/350 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + T L + + + I S + +L + ++ Sbjct: 22 LRRELSFTAGAVFLVLLTFMLTTLVIRILGMAAN-GEASPNDVLLLIGLATLGYLAILLC 80 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++V + SE+V+ G+S+ + P + S+ + L+ Sbjct: 81 ATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVALLALFGWPWAN 140 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSITIDKK 187 + +++ +++ ++ +FI G + + Sbjct: 141 QQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEADKIG 200 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + + + V L K Y+ +D + + Sbjct: 201 VALAKTGEFKTMPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQVDAN-- 258 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + K + + + + I +PL+ + LIA ++ R + + Sbjct: 259 ----LPTKSRPTTELLSNPTPENLGELVWRIGLPLLALNFVLIAVPLAYVNPRLGRYTPM 314 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + ++ + +++ G + + A P+ L + ++L + Sbjct: 315 IF-AVLIYLTYSNLLNLSQAWVAQGKINAMLA-WWPIHLLAFICAVLLFR 362 >gi|94500485|ref|ZP_01307016.1| predicted Permease [Oceanobacter sp. RED65] gi|94427275|gb|EAT12254.1| predicted Permease [Oceanobacter sp. RED65] Length = 340 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 22/312 (7%), Positives = 97/312 (31%), Gaps = 9/312 (2%) Query: 46 YSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPF 105 P +Q I+P + ++V+ ++ +E+ + A G Q+ Sbjct: 13 IPPEAVFYTILYNSPGFLQLILPLGFYISILLVYGRMHSENEMTVLYATGFGPKQVFRIT 72 Query: 106 VVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 + ++ + + +A + +Q+ + + + + + + Sbjct: 73 MAPVTVMMLLIGFLSLYLAPTAADKLDRYLQEQQQESEFSFVTPGRFNALGKGGEKVS-Y 131 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 A+ + + + + + + ++L + + + Sbjct: 132 AEDLSADRKQMQQVFMADGNVLLLAESGQQFVDPNSGSRYLELNNGKRFSGVPGDPNFEA 191 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 + + + + A ++ + + + + ++ I + +++ Sbjct: 192 MSFDRYAVKIAEESDVAKKARYEAVSTMELLD-------REHRVYKARLHYRIGLFILVP 244 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + ++A +S R + ++ + + YT + + + + G Sbjct: 245 IIVIMAFPLSHVKPRQGRYGKMLP-AVVLYMVYYTTLITARKWMEQGDTPEWLGLWWLHG 303 Query: 346 LTISLSILILLQ 357 + +S+ ++++ Sbjct: 304 IFLSIGLMLMYW 315 >gi|194426540|ref|ZP_03059094.1| putative permease [Escherichia coli B171] gi|300928087|ref|ZP_07143635.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|194415279|gb|EDX31547.1| putative permease [Escherichia coli B171] gi|300463884|gb|EFK27377.1| putative inner membrane protein [Escherichia coli MS 187-1] gi|323940179|gb|EGB36373.1| inner membrane protein yjgP [Escherichia coli E482] Length = 366 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAINVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|74314740|ref|YP_313159.1| hypothetical protein SSON_4446 [Shigella sonnei Ss046] gi|254037284|ref|ZP_04871361.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300916357|ref|ZP_07133099.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300935933|ref|ZP_07150886.1| putative inner membrane protein [Escherichia coli MS 21-1] gi|73858217|gb|AAZ90924.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|226840390|gb|EEH72392.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|284924431|emb|CBG37556.1| putative permease [Escherichia coli 042] gi|300416317|gb|EFJ99627.1| putative inner membrane protein [Escherichia coli MS 115-1] gi|300458869|gb|EFK22362.1| putative inner membrane protein [Escherichia coli MS 21-1] Length = 366 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 120/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVV 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ RA + + I + + M L+ +S+ R + Sbjct: 241 LDPNDTDQM-----DMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|89891367|ref|ZP_01202873.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] gi|89516398|gb|EAS19059.1| permease YjgP/YjgQ [Flavobacteria bacterium BBFL7] Length = 481 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 1/163 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY ++KT L + M ++ + + + + + A +P+ Sbjct: 1 MKILDRYILTSFIKTFLSVFIVIMFILILQAIWLYIKDLAGK-DLDMITIAKFMMYTIPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ +P ++ +I+VF N+ E ++ GIS+ + + ++ LG+ + N Sbjct: 60 IVPLALPLSIILASIMVFGNMAENYEFAAMKSNGISLQRAMRSLMIVVGTLGVTSFFFAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI 164 + G +L + ++ + + Q+ + + Sbjct: 120 TVIPWGHFKQGNLRRNIVNSKPAMAIGVGNFNQLGDINIKVDQ 162 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 21/274 (7%), Positives = 62/274 (22%), Gaps = 6/274 (2%) Query: 84 RTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGD 143 + + + + ++L + ++ ++ + D Sbjct: 182 KRNGNYTVIKSKKGELKSSLKSNIIQLVLTDGNYYDDLFPENAQKRRSSPFVRSYFDTYT 241 Query: 144 KQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYN 203 N + E D + + H+ Sbjct: 242 LNVDVSGLNNTDLNKADVTDNHRMLKIHELQTSIDSFTTKFNDNLSFYHKGQHKKWAPEL 301 Query: 204 DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSN 263 K ++ + + ++ +Q S + + S + Sbjct: 302 MKSRITDTITPGNITDNFISELKIYDQRRTIENTINKLKQQRSALNNRLFQLSEESKR-- 359 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + E + V+ + + I A + R + + + I Sbjct: 360 ---IAKHEIEIQKKFVLGAACIILFFIGAPLGA-IIRKGGMGLPLVIATLFFLTYHFINI 415 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G A + ++ L IL+ + Sbjct: 416 FAEKSAVEGAFPTWLGAWMGTLIIFPLGILLTYR 449 >gi|82779327|ref|YP_405676.1| hypothetical protein SDY_4285 [Shigella dysenteriae Sd197] gi|81243475|gb|ABB64185.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 366 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAIILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|323960302|gb|EGB55943.1| inner membrane protein yjgP [Escherichia coli H489] Length = 366 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|325110017|ref|YP_004271085.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] gi|324970285|gb|ADY61063.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] Length = 392 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 43/392 (10%), Positives = 111/392 (28%), Gaps = 40/392 (10%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + L G +L+ + + + + + Sbjct: 1 MKLLQRYITMELFRVFAMVLTGISVLLVFVGVFQQ----ASENGLGAMEVIQILPYVLYS 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IP L+ VV+ + EL +RA GI++ L+ P ++ +L + +L+ + Sbjct: 57 LLPITIPATMLLTVTVVYGRMAGDQELTAARAAGINLLSLIWPSLLMGAMLSVLALLLTD 116 Query: 122 PIATSGEKIGIDL----------------------------------IQQWKDNGDKQKS 147 + + + + + Sbjct: 117 QVIPWSIQKIQETVLVKMEKIFLDQLRADHQFVESNQGLAITVIDVQDKTLIKPTIRYTP 176 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 D I I ++ I + ++ I + + + + K Sbjct: 177 DNGQIFTIQAESARIRFNIQERTAWIKIVGGYINMDDGHGAWIREEEYPFPLPMVDKQPK 236 Query: 208 LKK--VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF 265 + V E I + + ++ + Sbjct: 237 ARHMAVKEISEELEEITATRRQQESHRVLARSSHLLTGHFEQLAMSSFVELVQQQHVDNQ 296 Query: 266 HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM 325 R T+++ + L+ + S+ ++ + F+ Y ++ + Sbjct: 297 RVDRLSTEYHSRFALAGSCFFFVLVGSPFSIMQAKRQFLTSFFMVFMPIVFLYYPVVMLA 356 Query: 326 KSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + K+G++ P + I + T + I +L + Sbjct: 357 MNQSKNGMVPPESVMWIANVATGVIGIYLLRR 388 >gi|75675869|ref|YP_318290.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] gi|74420739|gb|ABA04938.1| permease YjgP/YjgQ [Nitrobacter winogradskyi Nb-255] Length = 390 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 118/360 (32%), Gaps = 14/360 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + +Y F+ L + + L+ ++++ + + +I + + +P+ Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGID-LMTSQGQTILTFLGITSLAIPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S ++L PF+ ++++ + + Sbjct: 60 LVLIISPIALMIAVSHTLHKLATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A G + + + + + ++ I ++ P + F Sbjct: 120 YLAPDGMRRLKQWDAEITADVLANVLQPGRF---AQLDPNLTIRIRERQPGGQLAGIFID 176 Query: 182 ITIDKKNKIIHRKDADLAIIYND-------KVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + ++ D + + L++ + + + ++ Sbjct: 177 DRRNSNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFS 236 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + R +E+I + + + + P+ A Sbjct: 237 NRGHDVVYGIRERYLWELIAP-DEKDPLVQQLRGQFRAELHDRFTAPIYPFAFAA-LTFA 294 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L R+ + + G ++ + + + P+AA L ++L ++ I + Sbjct: 295 FLGSPRTTRQSRNFSMGAAIA-AVFGLRMAGFALSVMTVKSPMAALLQYLLLFGAIGISL 353 >gi|146313281|ref|YP_001178355.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] gi|145320157|gb|ABP62304.1| permease YjgP/YjgQ family protein [Enterobacter sp. 638] Length = 366 Score = 79.7 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 121/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + K N + Q S+ +FI + N ++ Sbjct: 121 GPWSSKHQDEVLAEAKANPGMAALAQGQFQQASDGSSVLFIESVDGSRFNDVFLAQIRTK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ LA + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGQLAQRKDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAVVG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + RA + ++ + + + M L+ +S+ R + Sbjct: 236 HQNVALDPTDTEQMDMRTLINTDTNRARAELHWRLTLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G + P+ L + L++++ Sbjct: 296 V-LSMLPAMLLYLVYFLLQTSIKSNGGKGKIDPMIWTWAVNGLYLLLAVVL 345 >gi|218692648|ref|YP_002400860.1| hypothetical protein ECED1_5114 [Escherichia coli ED1a] gi|218430212|emb|CAR11213.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|324005134|gb|EGB74353.1| putative inner membrane protein [Escherichia coli MS 57-2] Length = 366 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 120/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMSTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|123440874|ref|YP_001004865.1| hypothetical protein YE0501 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160137|ref|YP_004296714.1| hypothetical protein YE105_C0513 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122087835|emb|CAL10621.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607297|emb|CBY28795.1| putative permease [Yersinia enterocolitica subsp. palearctica Y11] gi|325664367|gb|ADZ41011.1| hypothetical protein YE105_C0513 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859699|emb|CBX70035.1| lipopolysaccharide export system permease protein lptF [Yersinia enterocolitica W22703] Length = 364 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ +++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALVTSALAAVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + + +Y + ++ + Q Sbjct: 181 GNQRPSVVVADSGYMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + ++ + H A +F++ + + + ++ M L+ +S+ R + Sbjct: 241 QNNNAADQM-----TMKQLWRSHQPDARAEFHWRLTLIVSVIVMALLVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S SG L P ++L++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNASSGKLDPSIWMWAVNGAYLALAVIL 345 >gi|257095656|ref|YP_003169297.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048180|gb|ACV37368.1| permease YjgP/YjgQ family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 359 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 107/356 (30%), Gaps = 10/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + + ++ L + N+ + + A L + Sbjct: 2 IFQRAVRREFAHAASGIFTALFAIMVTTQLIRLLNEAAQ-GGVAPDAVAALLGFASLNYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V ++ R SE+V+ + G+ + + P +V +I L + + Sbjct: 61 PPLLSLSMFVAILLTLSRCYRDSEMVVWFSSGLPLTAWIRPVLVFAIPLVATIAALSFFL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSI 182 + + + D + + + S + +F G + + + Sbjct: 121 SPWAVSQSAEYRGKLSIRKDAGEVSPGTFHESSAGDRVVFVEGIAEDTSQVRNVFVSETK 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + ++A + + L+ Y+ + ++ Sbjct: 181 EGRVGVTMAVTGHQEIAANGDRFIVLQDGRRYELAPASPEVRILEYVRYAVRLETKEARG 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + + + + + + IP V M L+A +S R+ Sbjct: 241 ITPTPKSMPLRELL-------PVDLPAYRAELLWRLSIPCSAVVMALLAIPLSFVNPRAG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + I + ++TI + + SG + + +L +SL L+ + Sbjct: 294 RSA-NMLLAILVYLIYNNLLTISQGWVASGKVSFPVGLMTVHLLMLSLLPLLFYHR 348 >gi|258544323|ref|ZP_05704557.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258520403|gb|EEV89262.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 352 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 115/359 (32%), Gaps = 14/359 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP IL+RY + L L L + ++ L+ + N ++S +L + Sbjct: 1 MP-ILYRYLIRETLAVFLATNLILLAILLSFRLSTLL-AAAAAGNMALSAVWMLIGLQAV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P ++ ++ L R E+ + A GI+ + +I +G+ + + Sbjct: 59 RFLVILMPLAFVLAAVMTLGRLYRDHEISAALACGIAPRHQTRALLACAIPIGLLLLTLS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + L QQ + + + I Sbjct: 119 MSVLPRVYRGQEALRQQAQQEAGMILFTPNTY---RRLDDGTIVHTGSIEGGQLRDFFIA 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 D + +I + ++ + L D TTL D Sbjct: 176 RDEPDGGHSLILAANGEMQGDEQQRHLLLHDGRRLAWNADHDPAHTTLFTYQHADLRLPG 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + A+ S ++ S + + +++ + L L ++ R Sbjct: 236 ANTLAASS----DNRLRNLPTSELGTSPEHLSEWQSRSNPAVALFIYALALPLLARSQPR 291 Query: 301 SNQPRIIVAYGIFSGFMLYT-IITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + IV F F LY ++ ++ + + P+ + + L+++++ + Sbjct: 292 QGRYQKIVPA--FIAFALYINLLDLITIAIRKQQIPPLPGSYW--LHGAVLALILICWQ 346 >gi|195940457|ref|ZP_03085839.1| permease YjgP/YjgQ family protein [Escherichia coli O157:H7 str. EC4024] Length = 366 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + K N + Q ++ +FI + N ++ Sbjct: 121 GPTSSRHQDEVLAEAKANPGLAALAQGQFQQATDGNSVLFIESVDGNRFNDVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ LA + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGQLAQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPTDTEQMDMRTLMNTDTDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G + P+ + L + L++ + Sbjct: 296 V-LSMLPAMLLYLVFFLLQTSIKSNGGKGKIDPMIWTWVVNGLYLLLAVGL 345 >gi|169634642|ref|YP_001708378.1| hypothetical protein ABSDF3307 [Acinetobacter baumannii SDF] gi|169797503|ref|YP_001715296.1| hypothetical protein ABAYE3539 [Acinetobacter baumannii AYE] gi|184156573|ref|YP_001844912.1| permease [Acinetobacter baumannii ACICU] gi|213155683|ref|YP_002317728.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|239502071|ref|ZP_04661381.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB900] gi|260556395|ref|ZP_05828614.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] gi|301512956|ref|ZP_07238193.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB058] gi|301594832|ref|ZP_07239840.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB059] gi|169150430|emb|CAM88327.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|169153434|emb|CAP02576.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] gi|183208167|gb|ACC55565.1| predicted permease [Acinetobacter baumannii ACICU] gi|193076099|gb|ABO10703.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] gi|213054843|gb|ACJ39745.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB0057] gi|260410450|gb|EEX03749.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii ATCC 19606] Length = 366 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 122/355 (34%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + S + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFG-VAAQGRLDASILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + +++ + +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + L ++ ++ I+ + Sbjct: 121 TPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K + +I K+A + ND + +V+ + I + T + Sbjct: 181 EGKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYT--QAEFQSYRLRLEND 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ +S S + ++ ++ + + P ++ +++ ++S R + Sbjct: 239 KDVKFESGDVEALSTSKLFSKANDPVVRSELGWRLFGPFTIIIALMLSVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ IF L ++ +K+ G L A +L +++ + +K Sbjct: 299 YYRLIP-SIFIFASLIVLMIAIKTRISKGELDIW--AYPVALLVYAIAAALFSRK 350 >gi|165976525|ref|YP_001652118.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876626|gb|ABY69674.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 334 Score = 79.7 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 96/311 (30%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 L +P + Q ++P V ++ SE+ + RA GI L Sbjct: 8 GKVPTDLVLSLLGLGMPALAQFMLPLSLFVALLLTLGRFYAESEITVMRACGIGKSLLTK 67 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 SI V + + +++ + K N +M Sbjct: 68 VAFFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKSNPRFSALSAGQFMTAGG----YV 123 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + + I E + D D++ K + +++ + Sbjct: 124 LFIENINNEQNKLNDIYVFQPDQQKKNRPSVVVAESGQLQGLPNGDQILTLENSTRYEGT 183 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + D +Q + S +++++ F+ A+ + + + L Sbjct: 184 ANVADFRISHFDSYQAYLGYQDVDSNEKLVQRADFNKLMADQS-NEAKAELQWRFALILA 242 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+A +S R + V + + + + + +KS G SG L + Sbjct: 243 VPLMALLAVPMSSVNPRQGRFAK-VIPAVLLYLIYFLLQSSLKSSGASGKLDATLLMPLV 301 Query: 344 VILTISLSILI 354 I L++++ Sbjct: 302 SIAFFILAMVM 312 >gi|188495933|ref|ZP_03003203.1| putative permease [Escherichia coli 53638] gi|188491132|gb|EDU66235.1| putative permease [Escherichia coli 53638] Length = 366 Score = 79.4 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 120/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + RA + + I + + M L+ +S+ R + Sbjct: 236 YQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|148261611|ref|YP_001235738.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] gi|146403292|gb|ABQ31819.1| permease YjgP/YjgQ family protein [Acidiphilium cryptum JF-5] Length = 386 Score = 79.4 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 106/355 (29%), Gaps = 14/355 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P L RY F+ L LG + LV++ + + S L VP Sbjct: 19 PTRLDRYVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQ-HGLSPVVFLHLTGLLVPS 77 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P +V + V+ L EL + RA G+S + P + ++L + + Sbjct: 78 FVAVILPITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNV 137 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + S ++ + + I + I Sbjct: 138 WLVPSTLARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDAR 197 Query: 182 ITIDK------KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + ++I D ++ + + + + +N +L P + Sbjct: 198 QKGEPATILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFRRNLISLAKPTGVT 257 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 A+ + + + R + + I P +++ +IA Sbjct: 258 RKLAPKTSEATMT----QLFHAGAAHVPPPVQRRWREEAWRRIASPFAVLSYAVIALLSV 313 Query: 296 LEFS-RSNQPRIIVAYGIFSGFMLYTIITIMKSFG--KSGILLPVAAALIPVILT 347 L R + +F L + ++ ++G++ + A + L Sbjct: 314 LRSPFRRQGGAAALVAAVFIVMGLVALELGTENLAARQNGLIPLIFAVTLGPALV 368 >gi|50083532|ref|YP_045042.1| hypothetical protein ACIAD0254 [Acinetobacter sp. ADP1] gi|49529508|emb|CAG67220.1| conserved hypothetical protein; putative permease [Acinetobacter sp. ADP1] Length = 366 Score = 79.4 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 111/350 (31%), Gaps = 8/350 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFG-VAAQGRLDAGVLFSIIGYRMPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + GIS +L + +++ + +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGISRIRLGQLLIPLALVFLVIQGILMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + L ++ ++ I+ + Sbjct: 121 TPWGLRQFDQLSSSQAVRTGFDLVRPKEFISSGPYTIYAGDLSEDRKNLKDIFFYQRAQK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K + +I K+A ++ N+ + +++ + I K + + Sbjct: 181 EGKPDVMILAKEATRVVMENETANVVDLIQGRRYEIYPGKAKY--SQAEFQRYRLRLEND 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + ++ + S N +++ ++ + + P +V ++A ++ R + Sbjct: 239 KSATFETDKVEALPSSKLWNKWNDPVIASEMGWRVFGPFTIVIALMMAVALCEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 ++ ++ +I I + I Sbjct: 299 YYRLIPAIFIFASLIVLLIAIRTRISRDE-----LGVWAYPAALAVYGIA 343 >gi|187929751|ref|YP_001900238.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|309781533|ref|ZP_07676269.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|187726641|gb|ACD27806.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12J] gi|308919946|gb|EFP65607.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 372 Score = 79.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 36/350 (10%), Positives = 103/350 (29%), Gaps = 10/350 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + T L + + + I + + +L + ++ Sbjct: 7 LRRELSFTAGAVFLVLLTFMLTTLVIRILGMAAN-GEANPNDVLLLIGLATLGYLAILLC 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++V + SE+V+ GIS+ + P + S+ + L+ Sbjct: 66 ATLFISVLLVLTRWYKDSEMVVWFTSGISLTDFIRPVLRFSLPFIVLVALLALFGWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSITIDKK 187 + +++ +++ ++ +FI G + + Sbjct: 126 QQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDSGMKHARNLFVANAEQDKIG 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + + + V L K Y+ +D D + + Sbjct: 186 VAVAKTGEFKTMPNGDRFVVLDKGRRYEGTPGKLDYRIVEF------DKYGVKVANKPPQ 239 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + K + + + I +PL+ + LIA ++ R + + Sbjct: 240 ADANLPTKSRSTKDLLADPTPENLGELVWRIGLPLLALNFVLIAIPLAYVNPRLGRYTPM 299 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + ++ + +++ G + A P+ L + ++L + Sbjct: 300 IF-AVLIYLTYSNLLNLSQAWVSQGKMNVFMA-WWPIHLAAFICAVLLFR 347 >gi|218702964|ref|YP_002410593.1| hypothetical protein ECIAI39_4734 [Escherichia coli IAI39] gi|218372950|emb|CAR20831.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] Length = 366 Score = 79.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-SDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|307129163|ref|YP_003881179.1| hypothetical protein Dda3937_01299 [Dickeya dadantii 3937] gi|306526692|gb|ADM96622.1| conserved inner membrane protein [Dickeya dadantii 3937] Length = 372 Score = 79.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ + L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGVPAMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+S LL ++ S+L F + + Sbjct: 61 QLILPLSLFLGLLMTFGRLYAESEITVMHACGLSKGVLLKAALLLSLLTASFAAANVLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + + N + Q + +F+G ++ Sbjct: 121 SPWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKANGSDFERVFLAQLHPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + +Y + ++ + Sbjct: 181 ENTRPSVVVADRGTVTARGDGSQVVTLSKGTRYEGTAMLRDFRITDFIDYQAIIGYQPVA 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + A +F++ + + L ++ M ++ +S+ R + Sbjct: 241 LDPNNVDQM-----DMQTLWRSSDIAARAEFHWRLTLILSVLVMAIMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G L P+ + + +L+I + Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSLRSNAGKGKLDPLVWMWLTNLGYFALAIAL 345 >gi|218551558|ref|YP_002385350.1| hypothetical protein EFER_4343 [Escherichia fergusonii ATCC 35469] gi|218359100|emb|CAQ91761.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324112114|gb|EGC06092.1| inner membrane protein yjgP [Escherichia fergusonii B253] Length = 366 Score = 79.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 120/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKGVLVKAAMILALFTGIVAAINVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSAVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + RA + + + + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMTTLWNTDSDRARAELNWRLTLIFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I + Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIAL 345 >gi|149914658|ref|ZP_01903188.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Roseobacter sp. AzwK-3b] gi|149811451|gb|EDM71286.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Roseobacter sp. AzwK-3b] Length = 380 Score = 79.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 108/354 (30%), Gaps = 10/354 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 ++ +F L + + ++ + +++ A +P +I I+P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLIG-DGQPAWVFLEFTALTLPGVIGVILP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + V L+ SEL + +A G S W+L+ P +V IL+ + L+ + + S Sbjct: 60 MAAFAATVYVTNRLSTESELTVVQATGYSPWRLMRPVIVFGILIALMMSLLTHFLIPSSL 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + N + ++ + ++++ + + Sbjct: 120 SQLRLRQDEVSQNITAKLLTEGEFLHPAPGITFYIRDITPDGELHNVFMSDRRDSENTMT 179 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRI-----PIDKNSTTLNIPIKMDGFQKFSEQ 243 +R K+ + + R N + +I + ++ Sbjct: 180 YTSNRAYLIQDPEGGTKLLMVDGLAQTVRRDGNRLFTTHFNDFSYDISALIASEATSLDK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSLEFSRS 301 +I + + + + PL+ + +I + + FSR Sbjct: 240 VTFAHTLDIARDPRAVADRTLSTVSQVIFELNNRFSQPLLCIVAAVIGFASLLLGGFSRF 299 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R I+ + + L P+ +P L ++ ++L Sbjct: 300 GVWRQILLAFTLLIVIKLVESRVSGLVLAHSDLWPL--MYLPAALGALVTAVLL 351 >gi|157804140|ref|YP_001492689.1| hypothetical protein A1E_04940 [Rickettsia canadensis str. McKiel] gi|157785403|gb|ABV73904.1| hypothetical protein A1E_04940 [Rickettsia canadensis str. McKiel] Length = 333 Score = 79.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 138/332 (41%), Gaps = 5/332 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + + ++ ++ + + S L ++P ++ Q+ I+ + NL + +E Sbjct: 1 MIISNIFDLLQKFKNIY-VPFSFFWRLILYKIPYLLGQVSSLISFTAMLFFLSNLTKNNE 59 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDN--GDKQ 145 L + + G+ IWQ+L + +++LGI ++NPI T G + L + D Sbjct: 60 LTVILSSGVHIWQVLVSPCIVTLILGIVFTTILNPIGTIGLQKYELLEAKLTKKALSDGI 119 Query: 146 KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDK 205 S S + I + I + T + +D N + R DA II N Sbjct: 120 ISKSGLLFFESLNDANQIIQTQFINVAEKKLNNITVLFVDSNNSFLKRIDALYGIIENKM 179 Query: 206 VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF 265 + L +V + N+ T+ + ++ + S + + K ++ S + Sbjct: 180 LHLNRVKVFT-KEETKAYNTLTIQTNLSINSLVNKFSRPDMVSIWALPKLINELLNSGLP 238 Query: 266 HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM 325 + +Y + P+M++A ++A+ R+N I+ G+FSGF+ Y++ I+ Sbjct: 239 AIN-YQIYYYKQLFKPIMMMATVILASCFISLKQRNNSQEKILILGLFSGFIAYSLSEIL 297 Query: 326 KSFGKSGILLPVAAALIPVILTISLSILILLQ 357 L +AA L+P +L +S I+L Sbjct: 298 LKILAYNNLSLIAAILLPSMLIFFISNFIILH 329 >gi|188583150|ref|YP_001926595.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] gi|179346648|gb|ACB82060.1| permease YjgP/YjgQ family protein [Methylobacterium populi BJ001] Length = 389 Score = 79.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 109/356 (30%), Gaps = 6/356 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ L L L+G ++V + + ++ + A +P +I Sbjct: 4 IERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAK-GQTLLVFLFITALSLPTLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I P + + LN SEL++ A G+ QLL PFV ++ + + + + Sbjct: 63 VIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFVTLALAVSVVVAFLTIQVM 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 S + D++ + + + + + N F ++ Sbjct: 123 PSSFQELRDVLTRVRGDFVANVVKEGQFTALDNGITFHFRERGADGSLQGLFIQDKREAG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGFQKF 240 + R V K + Q +++ + Sbjct: 183 KAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDAET 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + RS ++ R + + + L +A+ IA + + Sbjct: 243 VYKPRERSTLALL-FPDTGEGYYRLQKGRFRAELHDRLSAWLYPLALAFIAFAALGDPRT 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + Q R + G G + I S VAA + I+LS I+ Sbjct: 302 TRQGRGLAVAGAVLGVVALRIAGFAASSAAVRSPGAVAAVYAAPLGAIALSCFIIF 357 >gi|240140389|ref|YP_002964868.1| putative permease [Methylobacterium extorquens AM1] gi|240010365|gb|ACS41591.1| putative permease [Methylobacterium extorquens AM1] Length = 389 Score = 79.4 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 107/356 (30%), Gaps = 6/356 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ L L L+G ++V + + ++ + A +P +I Sbjct: 4 IERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAK-GQTLLVFLFITALSLPTLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I P + + LN SEL++ A G+ QLL PF + + + + + Sbjct: 63 VIAPVALFIACVYALNKLNGDSELIVMSAAGMPPRQLLRPFATLAFAISVVVAFLTIQVM 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 S + D++ + + + + + N F ++ Sbjct: 123 PSSFQELRDVLTRVRGDFVANVLKEGQFTALDNGITFHFRERGADGSLQGLFIQDKREAG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGFQKF 240 + R V K + Q +++ + Sbjct: 183 KAVVYLAERGRVSEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDSET 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + RS ++ R + + + L +A+ IA + + Sbjct: 243 VYKPRERSTMALL-FPDTGEGYYRLQKGRFRAELHDRLSAWLYPLALAFIAFAALGDPRT 301 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + Q R + G G + I S V A + I+LS L++ Sbjct: 302 TRQGRGLAVAGAVVGVIALRIAGFAASSAAVRSPGAVVAIYAAPLGAIALSCLLIF 357 >gi|254473376|ref|ZP_05086773.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] gi|211957492|gb|EEA92695.1| permease YjgP/YjgQ [Pseudovibrio sp. JE062] Length = 415 Score = 79.4 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 40/322 (12%), Positives = 106/322 (32%), Gaps = 7/322 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY + + L +V+ + + ++ + + A +P Sbjct: 19 MKTIERYIIRRSFTAFIVTLAAMTGVVWSTQALRQLDLVTSK-GQTLLQFGYITALALPF 77 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I + PF ++ I+V +++R SEL++ A G S W +L P + S+ + + Sbjct: 78 LILIVAPFAMMLAFIIVLNSMSRDSELIVINASGASKWLVLRPIMTFSLCVTALMYFLSI 137 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ +G + + + + ++ I + D Sbjct: 138 YLSPTGLAELRSELTRVRVDLVANIIKPGRFIPIEENLTFHIRNRSGDGVLEGLLLDDAR 197 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDGF 237 A V L ++ + + S ++ + Sbjct: 198 DPETSFTYTAETGRIIEAADKTLLVMLDGTIQRRPKGGQDMSIVSFESYGFDLSSMIPEA 257 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 ++ + + + R ++++ + + H + +F+ + +PL +A LI + Sbjct: 258 REPTFKASERPTFDLLSASPDDSYAA-KHWDKLIVEFHDRLSVPLYPIAFGLIIYAFLGS 316 Query: 298 FSRSNQ-PRIIVAYGIFSGFML 318 + Q + + I +L Sbjct: 317 PKTTRQDQGLAITTTIAVATLL 338 >gi|328675790|gb|AEB28465.1| Permease YjgP/YjgQ family protein [Francisella cf. novicida 3523] Length = 360 Score = 79.4 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 101/349 (28%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I A +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIAKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + I+ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIIICFGKYFANNEMFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 121 NPLSKQTLDIYRASLSAKALLSSITDKKIIKAPDGKIIYISNKSGNTLSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMDVNIYTKNSQN--SEYSHDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F+ I + ++ +L+A ++ R N+ Sbjct: 239 YNHDRVDRLYMHTLIENFNDKDNGTAFKAEFFGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + +G + +P I I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMTTGSMPVWIGFWLPHIFFIIFAV 346 >gi|114776266|ref|ZP_01451311.1| hypothetical protein SPV1_01062 [Mariprofundus ferrooxydans PV-1] gi|114553096|gb|EAU55494.1| hypothetical protein SPV1_01062 [Mariprofundus ferrooxydans PV-1] Length = 386 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 109/359 (30%), Gaps = 12/359 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L RY + +L L+ + ++ + ++ + + S L A +P + Sbjct: 2 TLDRYMLRLWLGPFFGGLVFVLAVMLLARALKLLGTVSDTAEA-WSLIVDLLALTMPFFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QI+P + L ++SE+ + R G+S ++ F + LL + + Sbjct: 61 LQIVPMAFFLSLQNTITGLQQSSEMDVLRGSGLSYGRMFRVFFIVVPLLWLGLTYIAMVQ 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G+ +++ + + + + G + + + Sbjct: 121 LPQGQLGFNNILAKIYAMKGAISFAPQRFTRGLDGITVYVDGEDSEGTYHGLILEDHRGG 180 Query: 184 IDKKNKIIHRKDADLAII---YNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + + D+ ++ +P Sbjct: 181 VSVIYTAKSARFDMGGEYLLLKLKDGVRLEGEGADQRMLAFDRYQVSIALPAGNRKILHS 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + E+ M S + +++P + + A +SL R Sbjct: 241 NDHVTMMTVPELWHAMHNSQSGAAVAE------WNRRLLMPTTTLVLLFFALPLSLTQKR 294 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 S + ++ GI M+Y + ++ G + + L + + + + E Sbjct: 295 SGKAGSMIG-GIALLVMVYNLQLLLYQQVNQGGFPGW-SMWMGQALLLFTGMFLSKRAE 351 >gi|297250818|ref|ZP_06934295.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837906|gb|EFH21844.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 188 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 68/187 (36%), Gaps = 4/187 (2%) Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPI 232 DK + + + +LK + G ++ ++ + I + Sbjct: 1 MGIKIWQRNDKNELTQAAEAESAVLNTDGSWQLKNIRRSILGEDKVEVSTAAEESWPISV 60 Query: 233 KMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 K + + S E+ + ++N + ++ +V P+ M L+A Sbjct: 61 KRNLMDVLLVKPDQMSVGELTTYIRHL-QNNSQNTQIYAIAWWRKLVYPVAAWVMALVAF 119 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + +R + + GI G + + + G+ + P A ++P L L++ Sbjct: 120 AFTPQTTRHGNMGLKLFGGICLGLLFHFAGRLFGFAGQLYGVPPFLAGILPTALFALLAV 179 Query: 353 LILLQKE 359 ++ ++E Sbjct: 180 RLIRKQE 186 >gi|238755186|ref|ZP_04616532.1| Inner membrane protein yjgP [Yersinia ruckeri ATCC 29473] gi|238706633|gb|EEP99004.1| Inner membrane protein yjgP [Yersinia ruckeri ATCC 29473] Length = 364 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 125/356 (35%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L + + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRVLGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+ L+ ++ S+L + + Sbjct: 61 QLILPLSLFLGLLMTYGKLYTESEITVMHACGLGKRPLIIAALILSMLTSGLAAVNAIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + + +F+G+ ++ + Sbjct: 121 GPWSSKHQDEVLNDARANPSLAALVEGQFQSSQDGNAVLFVGSVSGKEFQRVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVK--LKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 +++ ++ +A + L + Y+ R + T I Q Sbjct: 181 DNQRPSVVVADKGHMAERPDGSQVVLLNQGTRYEGTALLRDFRITDFTDYQAVIGHQVAQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S + A +F++ + + + +V M ++ +S+ Sbjct: 241 QDNNIVEQMSMAALWHS----------SEQDARAEFHWRLTLIVSVVIMAMLVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + + ++S G G L P+ + ++L++++ Sbjct: 291 PRQGRV-LSMLPAMLLYLIFFLLQSSLRSNGAKGKLDPMVWIWVVNGAYLALALVL 345 >gi|315223351|ref|ZP_07865210.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] gi|314946682|gb|EFS98671.1| YjgP/YjgQ family permease [Capnocytophaga ochracea F0287] Length = 495 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 1/154 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +L L L +++ + +++ + +P Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGR-GLELWIIFKFLIYFIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I+P ++ +I+ F E +A GIS+ +++ P ++ LL + T + N Sbjct: 60 LIPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 + + L + I Sbjct: 120 NVIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNI 153 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 71/236 (30%), Gaps = 2/236 (0%) Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE-D 178 + A E +++ N D + + + + ++ + ++ D Sbjct: 223 NSYEAQQKEPFAKVYFKKYIINLDLSHLNNVNFNEKTDATTYRMMNVGQLNYAIDSLRTD 282 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 F D N + R +A + ++KK + + + + Sbjct: 283 FKQNITDYGNNMFRRTGFSVAPSTSPSSEVKKQEKPKPAKEITSVRELFNKLNNTQKSMV 342 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 +++ + ++ + + + + +AA + F Sbjct: 343 LDMAINTNQAQLDNVEFRQSDLEYRYKLMNLHILNLSDKFALTVACFVLFFVAAPLGA-F 401 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + Y I MK+ ++ + P A IP ++ + L I + Sbjct: 402 IRKGGIGMPLVIAMILFLAYYFIGMFMKNIAENNTINPALAPWIPALILLPLGIYL 457 >gi|153824249|ref|ZP_01976916.1| permease YjgP/YjgQ family protein [Vibrio cholerae B33] gi|126518229|gb|EAZ75454.1| permease YjgP/YjgQ family protein [Vibrio cholerae B33] Length = 155 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 1/144 (0%) Query: 215 QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 + D + + S + + + ++ + R E Sbjct: 12 DIEISKESLPEYRWRTSLAPDKLAVVTVKPEELSLTGLSDYVHYLK-ASEQDSSRYELAL 70 Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + + P+ + M L+A S RS + G+ +GF Y L Sbjct: 71 WRKVTQPISIAVMMLMALSFIFGPLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGL 130 Query: 335 LPVAAALIPVILTISLSILILLQK 358 P+ AL P ++ +++++ +L +K Sbjct: 131 PPLFGALAPSLVFLAIALGLLGRK 154 >gi|27379218|ref|NP_770747.1| permease [Bradyrhizobium japonicum USDA 110] gi|27352369|dbj|BAC49372.1| bll4107 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 38/363 (10%), Positives = 107/363 (29%), Gaps = 14/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + RY F+ L + L+ ++++ + + +I + + VP Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGID-LMTSQGQTILTFLGITSLVVPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G S ++L PF + ++ + + Sbjct: 60 LVLIISPIALMIAISHTLNKLATDSEIIVMNAAGFSPFRLFYPFFYATCVVALLVAFIAA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A G + + + + Q+ I+ D Sbjct: 120 YLAPDGMRRIKQWDAEITADVLTNILQPGRFAQLDKNLTIRIRERLPGGILAGIFIDDRR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYN----DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ + + + + + L++ + + ++ Sbjct: 180 DPNERVSIVAEHGEVMKNDTGSFLVLETGNLQRFEVGKRDPALVAFGRYGFDMSKFSGQG 239 Query: 238 QKFSEQFASRSFYEIIKKMS----FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + R +E+ + F + ++ + ++ + A Sbjct: 240 RDVTLGIRERYLWELFSPSEDDPVYKQIPGQFRSALHDSLLAPIYPFAFAVLTFAFLGAP 299 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + SR+ + I + F L V V+ I + + Sbjct: 300 RTTRQSRN----FSIGSSIVAVFGLRMAGFACSVMAVKSP-AAVLVQYAMVLGAIGVGMW 354 Query: 354 ILL 356 +++ Sbjct: 355 MIV 357 >gi|260551090|ref|ZP_05825294.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] gi|260405857|gb|EEW99345.1| permease YjgP/YjgQ family protein [Acinetobacter sp. RUH2624] Length = 366 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 121/355 (34%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + S + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFG-VAAQGRLDASILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + +++ + +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + L ++ ++ I+ + Sbjct: 121 TPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K + +I K+A + ND + +V+ + I + T + + Sbjct: 181 EGKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIYPGQPKYTQAEFQSYRLRLENDKD 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++ + S ++ ++ + + P ++ +++ ++S R + Sbjct: 241 VKFESSD--VEALPTSKLLAKTNDPVIRSELGWRLFGPFTIIVALMMSVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ IF L ++ +K+ G L A +L +++ I +K Sbjct: 299 YYRLIP-SIFIFASLIVLMIAIKTRISKGELDIW--AYPAALLVYAIAAAIFSRK 350 >gi|167470530|ref|ZP_02335234.1| putative permease [Yersinia pestis FV-1] Length = 337 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 116/346 (33%), Gaps = 17/346 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNVVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K ++ K N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYND--KVKLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 +++ ++ ++ + + V L K Y+ R + I Q Sbjct: 181 GNQRPSVVVADSGHMSELPDGSQMVILNKGTRYEGTALLRDFRITDFVDYQAVIGHKQVQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S S E+ + A +F++ + + + +V M L+ +S+ Sbjct: 241 QSSNGADQMSMKELWRS----------QEPDARAEFHWRLTLIVSVVIMALLVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + + + + + + ++S G L P+ Sbjct: 291 PRQGRV-LSMLPAMLLYLIFFLLQSSLRSKAGKGQLDPLVWMWAVN 335 >gi|62260254|gb|AAX77892.1| unknown protein [synthetic construct] Length = 395 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 33/349 (9%), Positives = 97/349 (27%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I +P + Sbjct: 28 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 86 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 87 SLVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL 146 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 147 NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD 206 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 207 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 264 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F I + ++ +L+A ++ R N+ Sbjct: 265 YNHDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNK 324 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + + + +P I ++ Sbjct: 325 YAK-LLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAV 372 >gi|307946743|ref|ZP_07662078.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] gi|307770407|gb|EFO29633.1| permease YjgP/YjgQ family protein [Roseibium sp. TrichSKD4] Length = 395 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 117/366 (31%), Gaps = 10/366 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY FK + + +V+ + + +I + + +P Sbjct: 1 MKTLERYIFKRAIGVFFMAMAAMAGVVWSTQALRQLDLVTSK-GQTIVQFIGITMLALPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ + PF ++ ++V L+ SEL++ A G S + +L P ++ + + T + Sbjct: 60 LLVIVAPFALMIALVLVLNALSGDSELIVIDATGGSRFLVLKPVLIFTAAVTALTATLSI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A G + I + + + ++ + + + Sbjct: 120 YVAPLGLGELREEITRVRADLVANIVKPGHFINMDAGLTFHIRNRSGNGTLDGLLLHDVR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY----GRIPIDKNSTTLNIPIKMDGF 237 V ++ + + S ++ + Sbjct: 180 DKDTAFTYQSDTGHIVEVADRTLLVMQNGTIQRKPKGAGEISIVRFQSYAFDLSNLIPEA 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS-- 295 + + + RS ++ + + H + + + PL +A L+ + Sbjct: 240 SEPVYKASERSTMNLLNPPPNDAYA-LQHPDKLLAELHERFSQPLYCLAFALVVFAFLGK 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +R + I + I + +L T + + SG + + I +++S+ + Sbjct: 299 ARTTRQGR-GIAILGAITTCILLRTAGFGVTAIA-SGFTGLLLLLYVVPIAAMAVSVWSI 356 Query: 356 LQKEDG 361 +Q + G Sbjct: 357 MQDDRG 362 >gi|16125408|ref|NP_419972.1| hypothetical protein CC_1156 [Caulobacter crescentus CB15] gi|221234151|ref|YP_002516587.1| hypothetical protein CCNA_01214 [Caulobacter crescentus NA1000] gi|13422474|gb|AAK23140.1| hypothetical protein CC_1156 [Caulobacter crescentus CB15] gi|220963323|gb|ACL94679.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 406 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 109/343 (31%), Gaps = 6/343 (1%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 LG ++ +++ + + A LAA VP + +P V +V Sbjct: 27 AACLGVTVIALLLERILRLLDVLSQSSARFGYVAQLAANLVPHYLGLALPVAFFVALFIV 86 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 L+ SE+ A G S+ ++ PFV +LL +F+++V + ++ Sbjct: 87 IVKLSDGSEIDALLASGQSLERIAAPFVAVGVLLSVFSIIVFGYMQPYSRYAYRAVMHAA 146 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADL 198 + G + ++ ++ ++ D + Sbjct: 147 VNAGWNGRLAGGAFIDDKGSLLTADSADIAGQRLTRVFIRRLDAKGQEEIITAASADLKM 206 Query: 199 AIIYNDK-VKLKKVVE--YQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKK 255 + L+ + + T+L + + + Sbjct: 207 DPDGKTITMDLRDGRRIAHDAYGTYRNLAFTSLTTQTPLSAAAVLLRDRGGDERELTMGE 266 Query: 256 MSFSNKSNIFHNYRAE--TQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + KS + ++FY + L + L+A + L R N+ ++ G+ Sbjct: 267 LRREAKSPDPVVSKGTLLSEFYGRLARAAFLPFLPLLAFPLGLASKRGNRAPGLIMAGLL 326 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + + K+G AA IP L +LS+ + + Sbjct: 327 L-LAFQHSLLLGQGMAKAGKADAFAAIWIPFTLFAALSVWLFV 368 >gi|238798772|ref|ZP_04642243.1| Inner membrane protein yjgP [Yersinia mollaretii ATCC 43969] gi|238717404|gb|EEQ09249.1| Inner membrane protein yjgP [Yersinia mollaretii ATCC 43969] Length = 364 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 122/356 (34%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALGTSALAAVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 +++ ++ + + L K Y+ R + I Q Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + S + ++ + + A +F++ + + + +V M L+ +S Sbjct: 241 QNSNVAEQMTMKQLWRS----------NEADARAEFHWRLTLIVSVVIMALLVVPLSAVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + + ++S +G L P+ +++++++ Sbjct: 291 PRQGRV-LSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPLLWMWTVNGTYLAIAVIL 345 >gi|296122759|ref|YP_003630537.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] gi|296015099|gb|ADG68338.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] Length = 394 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/392 (12%), Positives = 116/392 (29%), Gaps = 41/392 (10%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +L RY LK G +L+ + + + + +P Sbjct: 1 MMPLLQRYILVDLLKVFAVSAAGFTLLLVFAGVYVE----AKEHGLGPMQILQILPFIIP 56 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ IP L+ VV+ L+ E++ ++A GI I +L P + ++L IFT+++ Sbjct: 57 TLLPFTIPTALLLTVCVVYGRLSGDQEIIAAKAAGIHIISVLWPAFLLGVVLSIFTLVIT 116 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-------ISNPQQDIFIGAKKILPEN 173 + + K I ++ + I+ Sbjct: 117 DQMIPWSMKRIQRTIAMAVEDIFFDVLKAQNQLNLRDQGLSITVMDVRDRTLYMPTFRYM 176 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + T + + + +D + + + L + + N K Sbjct: 177 RGNKPVTVQAKEARLRFDLDRDVVVMEFKDGYISLPDDANTRVRFRYDAREFPLPNRSQK 236 Query: 234 MDGFQKFSEQFASRS----------FYEIIKKMSFSNKSNIFHN---------------- 267 S + + + ++ + + S F Sbjct: 237 AKSRDMTSREILAETRAMATGDATATRQLAIEAALILASGDFDRFGEKEFAVSRYQVDEE 296 Query: 268 ----YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + T+ + I + L+ A ++ +++ + + + Y + Sbjct: 297 RNRSMKLTTELHNRISMAFGCFFFVLVGAPFAVYMAKNQFLTSFLFCFVPILVVYYPLSM 356 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + ++ K G + P A +P + I+ Sbjct: 357 MAQNLSKVGKVDPSWAVWLPNGALTLGFLYII 388 >gi|255264665|ref|ZP_05344007.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] gi|255107000|gb|EET49674.1| permease YjgP/YjgQ family protein [Thalassiobium sp. R2A62] Length = 380 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 125/365 (34%), Gaps = 15/365 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + +F L +++ +V + +Q+ S A +P +I+ Sbjct: 10 LDRYMLSQLMMLFGFFSLVLIMVYWVNRAVILFDQLI-ADGQSAGVFLEFTALSLPNVIR 68 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P ++ V L+ SEL + +A G S +L P +V +L+ +++ + + Sbjct: 69 LVLPLSAFAASVYVTNRLSTDSELTVMQATGHSAVRLARPVIVFGLLVTALMMVLTHVLV 128 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + D + +N + ++ NP I ++I + + F + T Sbjct: 129 PTSLSRLNDREAEIAENVTARLLTEGTFL---NPASGITFYVREISASGELLDIFLTDTR 185 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKV-------VEYQYGRIPIDKNSTTLNIPIKMDGF 237 + K +I + + + +D +L + +T +I +D Sbjct: 186 NPKRQITYTAEQSFLVRSDDGPQLVMINGLTQTLTLETQRLTTTTFADSTFDIGGLIDSG 245 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VS 295 + + +++ + + + + L+ V L+ S + Sbjct: 246 SRGRVNIREVATMDLLYPTQEIRDLTRRDDATLIHEGHGRFLQALLAVVAALVGFSTLLI 305 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 FSR + IF + T+ ++ G P+ + + +S L Sbjct: 306 GGFSRFG-ISKQIVIAIFLLIAIKTVESVAVG-AIRGQAHLWPIIYTPIAVGLVISAAQL 363 Query: 356 LQKED 360 + Sbjct: 364 YWADH 368 >gi|134302362|ref|YP_001122331.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis WY96-3418] gi|134050139|gb|ABO47210.1| putative permease YjgP/YjgQ family [Francisella tularensis subsp. tularensis WY96-3418] Length = 351 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 123/361 (34%), Gaps = 19/361 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 4 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 62 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIA 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P N + Sbjct: 122 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNIANIEPTNGKAYGIRKFMV 169 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 170 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISV 229 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 230 AKVITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 289 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 RS+ + + G F GF + I I L P+ A P ++ + L I + ++ + Sbjct: 290 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 349 Query: 360 D 360 + Sbjct: 350 E 350 >gi|49475339|ref|YP_033380.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] gi|49238145|emb|CAF27353.1| hypothetical protein BH05450 [Bartonella henselae str. Houston-1] Length = 396 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 111/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K L ++ A+ + + + + N ++ + + VP Sbjct: 1 MRIIELYILKRILILFSAVMIAAIGISWTVQILARIN-FLTTSKQTLLTILQFSISLVPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +IPF L+ +N+ SEL I A G + P ++ + + + + N Sbjct: 60 VIFLVIPFALLIAITSTLSAMNQDSELAIISASGFPKSTVWRPILLIAFVASCASFFIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + ++ + + + I Q++ + + Sbjct: 120 FVIPQARLNMRQMLATTHYDLINLFISEGSFQKLANNLYIEIGQRNPDGTLAHLFIADQR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 K ++ K+ ++ N +++ + + +L I D Sbjct: 180 DPKIDLFYYATKASVVSNKNGHFLVLNNGEIERINHQNDSVSIVQFSSYTFSLGEFIPND 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S+ + + + P++ + L AA + Sbjct: 240 KTPTLYPKDRPLSYLRNPNPKDLYYQRKPLQYRAEFHRRLTEWLYPIVFSLIALAAAGDT 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + I F++Y I KS + +IP+ ++I + ++L Sbjct: 300 RSYRQVGNSAN--FSAIAFSFLVYWIGYFAAEKAKSDLAYVPLLYIIPIGVSILVFFMLL 357 >gi|256820290|ref|YP_003141569.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] gi|256581873|gb|ACU93008.1| permease YjgP/YjgQ family protein [Capnocytophaga ochracea DSM 7271] Length = 495 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 1/154 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +L L L +++ + +++ + +P Sbjct: 1 MKILDRYIITQFLTNFLGALSILVLIFVFHTIFTYIDELAGR-GLELWIIFKFLIYFIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I+P ++ +I+ F E +A GIS+ +++ P ++ LL + T + N Sbjct: 60 LIPIIMPLAVVIASIMTFGAFAENYEFAAMKASGISLMRVMRPLIILMALLSLGTFFLAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 + + L + I Sbjct: 120 NVIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNI 153 Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 1/79 (1%) Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + + + +AA + F R + + + Y I MK+ ++ + Sbjct: 380 DKFALTVACFVLFFVAAPLGA-FIRKGGIGMPLVIAMILFLAYYFIGMFMKNIAENNTIN 438 Query: 336 PVAAALIPVILTISLSILI 354 P A IP ++ + L I + Sbjct: 439 PALAPWIPALILLPLGIYL 457 >gi|238760356|ref|ZP_04621497.1| Inner membrane protein yjgP [Yersinia aldovae ATCC 35236] gi|238701416|gb|EEP93992.1| Inner membrane protein yjgP [Yersinia aldovae ATCC 35236] Length = 364 Score = 79.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 120/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ +V +I+ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALVLAIVTSALAAVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K D++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDDVLNDARANPSLAALAGGQFKSSTDGNAALFIGNVNGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + N + +Y + ++ + Q Sbjct: 181 GNQRPSVVVADRGHMTERPNGSQVVVLNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + A +F++ + + + ++ M L+ +S R + Sbjct: 241 QNNNVVEQM-----TMKQLWSSDEPEARAEFHWRLTLIVSVIIMALLVVPLSAVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S +G L P+ +++++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNAGNGKLDPLIWMWAVNGTYLAIAVIL 345 >gi|228472915|ref|ZP_04057672.1| permease [Capnocytophaga gingivalis ATCC 33624] gi|228275497|gb|EEK14274.1| permease [Capnocytophaga gingivalis ATCC 33624] Length = 477 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/273 (11%), Positives = 83/273 (30%), Gaps = 1/273 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY ++ + L M++ + +++ S A +P Sbjct: 1 MKILDRYILSRFIFNFISSFLIIMVIFIFQTIWLYVDELVGR-GLSFLVVIKFIALMLPN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I+P ++ +I+ + EL +A G+S+ + ++ +LL I N Sbjct: 60 LIPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKATRMLILFMVLLSIGVFFTFN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + L K+ + + + + + H Sbjct: 120 NLQPWSNRKFVALRDSIKNKQPSLAISQGIFNNVQDFSIKVAKKTGENEQYLHDIVIHKV 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +I K+ +L+ L+ +++ + + + + P F+ Sbjct: 180 GINGDTRTVIKAKNGELSGHKKGSDVLQLILKDGSYYEDVYNDKSDITFPFVKAKFETHV 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 + I + + ++ Sbjct: 240 LNIDISALNADITYDENAERDYYKTMNISQLSH 272 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 32/112 (28%), Gaps = 1/112 (0%) Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + S + + + I + + + +AA + R Sbjct: 339 KDNIISLVNSLDNNKDNVEYQQKLINVYRLTLSDKIALAITCFVLFFVAAPLGA-IIRKG 397 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I Y + K+ +G + P A +P + L + + Sbjct: 398 GIGMPLVVAIGLFLSYYFSGLLTKNMATNGNINPYIAPWVPTFFLLPLGVYL 449 >gi|261342656|ref|ZP_05970514.1| inner membrane protein YjgP [Enterobacter cancerogenus ATCC 35316] gi|288315304|gb|EFC54242.1| inner membrane protein YjgP [Enterobacter cancerogenus ATCC 35316] Length = 366 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 123/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L +I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVKILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ GI + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIIAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + K N + Q S+ +FI + N ++ Sbjct: 121 GPASSRHQDEVLAEAKANPGLAALAQGQFQQASDGNSVLFIESVDGNRFNDVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L+ + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGQLSQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIVG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQTVALDPTDTEQMNMRTLIATDSDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G + P + L + L++ + Sbjct: 296 V-LSMLPAMLLYLVFFLLQTSIKSNGGKGKIDPAIWTWVVNGLYLLLAVGL 345 >gi|74316599|ref|YP_314339.1| hypothetical protein Tbd_0581 [Thiobacillus denitrificans ATCC 25259] gi|74056094|gb|AAZ96534.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 359 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 111/350 (31%), Gaps = 8/350 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R + T L + + VI + + + + + + Sbjct: 5 RALTREMGLATGAVLTVLIAIALVILFIRLLGDVA-RGELANEAVFAFLGFSLLYFLPVL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + ++ + R SE+VI G+S+ Q L P + ++ L + +L+ + Sbjct: 64 MTISLFAGVLMPLSRMWRDSEMVIWFNAGLSLAQWLRPVLAFAVPLSLVILLLTLVLNPW 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + D Q K + + + ++ ++ + L + F ID Sbjct: 124 LQAKKNDYRQDLKARSESALIAPGLFAESGAGERVYYVESLNPLTGI-VRNVFMQSRIDG 182 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + ++ ++ D + + L +Y P + + + Sbjct: 183 QLGLVVAREGDHTELPDGSRYLVFRQGRRYEGTPGTLDYRVVEFERYWMRLDPVATGGRD 242 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + + A + + + +PL + + ++A +S +R + Sbjct: 243 TNIRQ-----KSAGDLLADPAPAARAELLWRLGVPLSALVLAVMAIPLSFVNTR-ARRSY 296 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + F+ ++++ +++ G P A ++ + + + Sbjct: 297 GLVTALLLYFVYNNLLSLTQAWVAQGRFDPWAGMASAHLVMLLAAAGLFY 346 >gi|149907704|ref|ZP_01896451.1| hypothetical protein PE36_07442 [Moritella sp. PE36] gi|149809374|gb|EDM69303.1| hypothetical protein PE36_07442 [Moritella sp. PE36] Length = 361 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 36/347 (10%), Positives = 111/347 (31%), Gaps = 18/347 (5%) Query: 14 LKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLV 73 +K+ + L ++ + +++ + + +P + I+P + Sbjct: 1 MKSQVAVLFILSLIFVSQQFVALLSKVMT-GALPANLVMEMLLYTMPALGTLILPVSLFI 59 Query: 74 VNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGID 133 + L SE+VI A G + ++L ++ S + A + E+ + Sbjct: 60 GILFAHGRLYAESEMVILTACGYTPSRILMSSLLLSSVTIGLVAFNAFIYAPTAEEGRVQ 119 Query: 134 LIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHR 193 L++ + + + +++ + S + + + I Sbjct: 120 LLENVDADVGLATLKQGRFESLDGGLAVVYVESYDSDKSLRKIFIAKSPSQEGERPSIVL 179 Query: 194 KDADLAIIYND---KVKLKKVVEYQYGRIPIDK---NSTTLNIPIKMDGFQKFSEQFASR 247 D ++ +KL + + Y+ D + + + I+ + + + Sbjct: 180 ADKGNVESDDNGSQWLKLSQGLRYEGELSQRDFRIVDFSEYRVFIQEQDVSERGRKTKAL 239 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 E+ + + + + + I + + +TL+ +++ R + Sbjct: 240 PTSELWNS----------NEFEHKVELQWRIAQVVAIPLLTLLVVPLAMVNPRQGRYAK- 288 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + +++ +S L V I + + L+I Sbjct: 289 LFPALLMFLTYFMLLSAARSAILDEKLPLVFGFWIVHLGVLILAIWF 335 >gi|33519520|ref|NP_878352.1| putative inner membrane protein [Candidatus Blochmannia floridanus] gi|33517183|emb|CAD83565.1| putative inner membrane protein; predicted permease [Candidatus Blochmannia floridanus] Length = 360 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 115/359 (32%), Gaps = 9/359 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY KY L L + L +I L + + YS+ + Sbjct: 3 MSNILERYIKKYVLLNIFMIFLIFISLSSIIRLVDELRNF-QKQTYSVFEIFFCIFLNII 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + TL+ ++ L +EL+I + G+S Q+ + SI + + V+ Sbjct: 62 KDFELFLSLSTLLGGVLGLGILELRNELIIMKVFGLSNLQINLSVIKTSIFIVLLYVIYN 121 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + N + + Sbjct: 122 IWLLPYSQYLLCSHQHYKQYNVYLFPEKNKN---LWLMDSGNSFIHVNYMLTTQDLLGIN 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN----STTLNIPIKMDG 236 ++ ++ + A ++ + + E ++ N S N + Sbjct: 179 LYHFTEERQLKRIIYIEKATYIDNSWSVSNINELEFVDKMQFLNRKILSYEWNTTLTPAI 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S ++I + + + Y + F+ I P+ V M IA S Sbjct: 239 LSMITVNPHFLSISKLICCIKYFDVLGQNSKY-YQLIFWDKIFSPIFGVMMLTIALLYSY 297 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + +G GF+ Y + I + + P+ ++I ++L + ++ + L Sbjct: 298 GPFYKKKISFRLFFGGIIGFVFYVLHQIFEILSIVYNITPIVGSIILIMLFLMINTIFL 356 >gi|56708377|ref|YP_170273.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256770|ref|YP_514132.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110670847|ref|YP_667404.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115315161|ref|YP_763884.1| hypothetical protein FTH_1435 [Francisella tularensis subsp. holarctica OSU18] gi|167010911|ref|ZP_02275842.1| hypothetical protein Ftulh_09398 [Francisella tularensis subsp. holarctica FSC200] gi|187931970|ref|YP_001891955.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457507|ref|ZP_03665980.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371000|ref|ZP_04987003.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254875200|ref|ZP_05247910.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604869|emb|CAG45953.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89144601|emb|CAJ79920.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|110321180|emb|CAL09336.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|115130060|gb|ABI83247.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|151569241|gb|EDN34895.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|187712879|gb|ACD31176.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841199|gb|EET19635.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159996|gb|ADA79387.1| hypothetical protein NE061598_09765 [Francisella tularensis subsp. tularensis NE061598] Length = 353 Score = 78.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 123/361 (34%), Gaps = 19/361 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 6 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P N + Sbjct: 124 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNIANIEPTNGKAYGIRKFMV 171 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 172 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISV 231 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 232 AKVITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 RS+ + + G F GF + I I L P+ A P ++ + L I + ++ + Sbjct: 292 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 Query: 360 D 360 + Sbjct: 352 E 352 >gi|254374089|ref|ZP_04989571.1| hypothetical protein FTDG_00250 [Francisella novicida GA99-3548] gi|151571809|gb|EDN37463.1| hypothetical protein FTDG_00250 [Francisella novicida GA99-3548] Length = 353 Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 122/361 (33%), Gaps = 19/361 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 6 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTIVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P + Sbjct: 124 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNIANIEPTKGKAYGIRKFMV 171 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 172 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPIPISV 231 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 232 AKVITINDNDYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 RS+ + + G F GF + I I L P+ A P ++ + L I + ++ + Sbjct: 292 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 Query: 360 D 360 + Sbjct: 352 E 352 >gi|254372627|ref|ZP_04988116.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570354|gb|EDN36008.1| permease YjgP/YjgQ family protein [Francisella novicida GA99-3549] Length = 353 Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 122/361 (33%), Gaps = 19/361 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 6 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P + Sbjct: 124 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNISNIEPTQGKAYGIRKFMV 171 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 172 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPIPISV 231 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 232 AKVITINDNDYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 RS+ + + G F GF + I I L P+ A P ++ + L I + ++ + Sbjct: 292 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 Query: 360 D 360 + Sbjct: 352 E 352 >gi|296114026|ref|YP_003627964.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] gi|295921720|gb|ADG62071.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis RH4] Length = 396 Score = 78.6 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 107/368 (29%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY TT L ++++ L E ++ L P + Sbjct: 16 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAE-GGLNVGVLFRLIGYNFPYFL 74 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++VF L E+ + A GIS ++ + ++L V Sbjct: 75 ELILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVA 134 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + ++ Q+ ++ + + + Sbjct: 135 KPWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTA 194 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVV-EYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D I ++ + Q + + Sbjct: 195 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 254 Query: 243 QFASRSFYEIIKKMSFS------------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 S E + S + A + + + +P +++ L+ Sbjct: 255 MTLSVKPPEGTSHIRIEGVSTTELLSIIQGHSKRDNPQEAYAELGYRLSMPWLILLAILL 314 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A +S R + +V + + +I++ + K G L PV L +++ + + Sbjct: 315 ATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVI-YLAALLMMMVV 372 Query: 351 SILILLQK 358 ++ + + Sbjct: 373 AMYLNYHQ 380 >gi|326405101|ref|YP_004285183.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] gi|325051963|dbj|BAJ82301.1| permease YjgP/YjgQ family protein [Acidiphilium multivorum AIU301] Length = 374 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 106/355 (29%), Gaps = 14/355 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P L RY F+ L LG + LV++ + + S L VP Sbjct: 7 PTRLDRYVFRQLLIGLAVSTLGLVALVWLTQSLRFIQLIIQ-HGLSPVVFLHLTGLLVPS 65 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P +V + V+ L EL + RA G+S + P + ++L + + Sbjct: 66 FVAVILPITCFIVILFVYARLAADRELTVMRASGMSDAAIARPALALAMLTMLACWGLNV 125 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + S ++ + + I + I Sbjct: 126 WLVPSTLARFTHFESIIRNQVAAFLLEPGVFTPIPGHITVYVQRRDHDQVLHGIVIQDAR 185 Query: 182 ITIDK------KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + ++I D ++ + + + + +N +L P + Sbjct: 186 QKGEPATILARSGRLIDGPDGPEVLLLDGSREQVDPKTGRLNILSFRRNLISLAKPTGVT 245 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 A+ + + + R + + I P +++ +IA Sbjct: 246 RKLAPKTSEATMT----QLFHAGAAHVPPPVQRRWREEAWRRIASPFAVLSYAVIALLSV 301 Query: 296 LEFS-RSNQPRIIVAYGIFSGFMLYTIITIMKSFG--KSGILLPVAAALIPVILT 347 L R + +F L + ++ ++G++ + A + L Sbjct: 302 LRSPFRRQGGAAALVAAVFIVMGLVALELGTENLAARQNGLIPLIFAVTLGPALV 356 >gi|291060242|gb|ADD72977.1| putative permease, YjgP/YjgQ family [Treponema pallidum subsp. pallidum str. Chicago] Length = 372 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 98/353 (27%), Gaps = 3/353 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y +L L+ A +++ ID+ Q Y S + +P Sbjct: 1 MKILQVYMLDMFLPIFFLVLVCASMILDAIDILVNLTQFIS-NGYRFSSLVKIWYVSIPH 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L L +E + G+S + ++ P+ L I N Sbjct: 60 YVLLCCPLSVLFAATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++I + + + I + Sbjct: 120 SVVVVSQSKKDEIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMK 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + K+I A +K ++ + + + + ++ F Sbjct: 180 NSNGTIQKLIEAHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQD 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S +I + + ++ H +FY PL + M ++ ++ F + Sbjct: 240 FLTKGMSIQKIKETLHTLKYASKPH-RELSIRFYKKFYFPLTMCIMLCLSF-LTGSFLKK 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + Y + + P PV+ + L + Sbjct: 298 RSLIMYIFCSVVLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYV 350 >gi|226227978|ref|YP_002762084.1| hypothetical protein GAU_2572 [Gemmatimonas aurantiaca T-27] gi|226091169|dbj|BAH39614.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 578 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 1/142 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + ++ ++ L L+ + + + S +P Sbjct: 1 MKLLTRYVIREHIGPLVFALSALTSLLMLQYVARQLANLAGK-GLPWSAIGQFFVLSLPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P LV + F + E+ +A G+ + ++ P + ++LL +F V + Sbjct: 60 TVAMTLPMAVLVATLYAFGRMAAEHEITAFKASGVRVRTMMLPVLFCALLLSLFMVWFND 119 Query: 122 PIATSGEKIGIDLIQQWKDNGD 143 + + L + Sbjct: 120 QVLPAANHRLSMLQRDIARTKP 141 Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 1/85 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + + + L ++L F R + + I + Y + ++ G L Sbjct: 457 HKKFALSFACLVFVLFGPPIALRFPR-GGVGVTIGVSIIVFGLYYVCLMGGEALADKGRL 515 Query: 335 LPVAAALIPVILTISLSILILLQKE 359 A I ++ +++++L + E Sbjct: 516 PAYVAMWIANVIFTLVALVMLWRVE 540 >gi|283834896|ref|ZP_06354637.1| inner membrane protein YjgP [Citrobacter youngae ATCC 29220] gi|291069156|gb|EFE07265.1| inner membrane protein YjgP [Citrobacter youngae ATCC 29220] Length = 366 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 121/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTSIIAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ K N + Q +N +FI + N ++ Sbjct: 121 GPWSSRHQDEVLADAKANPGMAALAQGQFQQATNGSSVLFIESVDGSNFNDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQMRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWKTDNDRARAELTWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G L PV +L ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLVQTSLKSNGGKGKLDPVFWMWAVNLLYLALAIVL 345 >gi|118497254|ref|YP_898304.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|118423160|gb|ABK89550.1| conserved membrane protein of unknown function [Francisella novicida U112] Length = 353 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 122/361 (33%), Gaps = 19/361 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 6 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P + Sbjct: 124 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNIANIEPTKGKAYGIRKFMV 171 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 172 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPIPISV 231 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 232 AKVITINDNDYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 RS+ + + G F GF + I I L P+ A P ++ + L I + ++ + Sbjct: 292 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 Query: 360 D 360 + Sbjct: 352 E 352 >gi|291279033|ref|YP_003495868.1| hypothetical protein DEFDS_0631 [Deferribacter desulfuricans SSM1] gi|290753735|dbj|BAI80112.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 344 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 113/356 (31%), Gaps = 13/356 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I +Y K + L L I + +ID +++ N A L +P Sbjct: 1 MRITEKYVLKELVPVFLVGNL-FFIFILLIDKIVDLSELILAKNVPFFFVAELIIAYIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP TL+ ++V+ L+ SELV +++G + + P ++ + + +L+ Sbjct: 60 FLVITIPTSTLLSALIVYGRLSDDSELVAMKSLGADKYNIFKPSILLGFISLVLALLMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G I+ + Q + K + +N Sbjct: 120 YLMPKGNDFAIERLMQISKYVSINDFKENELYTEIP---GFVLYTDKRVDKNKFLGLIII 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + + + L V K + + Sbjct: 177 NKKDHIVIQAKKGEIVNTTEGSLVFNLDNGVLIDTKGEIPSKLEFKSFVVNVP-IITEKK 235 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I ++ NKSN + + +P + M + A V F R Sbjct: 236 FDVRNERLMSIRNLINHLNKSN-----IIKFELSKRFALPFASIIMAIFGAVVGSFFHR- 289 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ I + T++ + ++ +L P AA + I+ I L + +L + Sbjct: 290 GGKAFGLSVSIIIVLIYNTLLLLSQNL--INMLNPYLAAWVANIIFIILLVYLLRR 343 >gi|315138812|dbj|BAJ45971.1| conserved inner membrane protein [Escherichia coli DH1] Length = 366 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ ++ ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAMLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWCITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + I T +KS G G L P ++ ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 345 >gi|34558361|ref|NP_908176.1| permease [Wolinella succinogenes DSM 1740] gi|34484080|emb|CAE11076.1| conserved hypothetical protein-PREDICTED PEMEASE [Wolinella succinogenes] Length = 355 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 116/353 (32%), Gaps = 5/353 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +R+ YLK LL IDL + E S + + + Sbjct: 5 FRFLGALYLKYFFILLLALETFFVGIDLL----KFAEELPPSANLVVLFVVYDALYALNF 60 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 I+P ++ I++F L RT+EL +IG S Q+ P + ++L +++ Sbjct: 61 ILPIALVLAQILLFVVLLRTNELTALLSIGYSKRQITTPLLGIALLFTFGFIVLNATPFA 120 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ ++ Q K++ + + + K + + E Sbjct: 121 YAKERVDTILDQGYVGNFKRELFVKYHDSYIYFDKIYPLLQKAEGVKVYRLEGDRVAQWI 180 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + + + ++ + + + E+ Sbjct: 181 EAKEARFVDNHWRLNEAMVMTIPSELTLGGSPLEVEKVDFMEVLEGFRPRILDSIYERHG 240 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + S + I+ MS + + ++ + Y L++ P ++ A R Sbjct: 241 AVSIIDAIESMSLLLEQQV-NSQKIRGILYSLVLFPFFAPLCMVLVAYYMPITMRYGNLA 299 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 IIV I + + + + SG + P + LIP+IL +L++ + Sbjct: 300 IIVFAAILGVLLFWGLFFALSRLSMSGFIHPEVSLLIPMILWTALALFFWRRL 352 >gi|148255228|ref|YP_001239813.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146407401|gb|ABQ35907.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 389 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 112/361 (31%), Gaps = 12/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + RY F+ L + L+ ++++ + + +I + +P Sbjct: 1 MGSIDRYIFRTTLASFAVVLVSLTGVIWITQALRGID-LMTSQGQTILTFLGITGLVIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S +L PF + ++ I + Sbjct: 60 LLGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVAILVTFIAA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 A G + + + + Q+ + I D Sbjct: 120 FFAPDGLRRIKQWDAEITADVLANILQPGRFAQLDQNLTIRIRERQPGGELQGILIDDRR 179 Query: 182 ITIDKKNKI----IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ I K+ D + + + L++ + + ++ + Sbjct: 180 DPKERITIIAEKGTVVKNPDGSFLVLEDGNLERFEVGKREPAMVAFARYAFDMSKFSNQG 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV--S 295 + + R +E++ + + + + + P+ A + + + Sbjct: 240 RDVTLGIRERYLWELMAPAED-DPIYKQIPGQFRQELHDRFLAPIYPFAFAALTFAFLGA 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +R ++ I + F + PVAA + ++L L + I Sbjct: 299 PRTTRQSRN-FSFGSAILAVFGVRMAGFACSVMTVK---TPVAALVQYLMLFGVLGLSIW 354 Query: 356 L 356 + Sbjct: 355 I 355 >gi|169656684|ref|YP_001428997.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|290954454|ref|ZP_06559075.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312116|ref|ZP_06802927.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica URFT1] gi|164551752|gb|ABU62041.2| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 353 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 123/361 (34%), Gaps = 19/361 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 6 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P N + Sbjct: 124 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNIANIEPTNGKAYGIRKFMV 171 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 172 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHINIVTNMTNAVWSNPLPISV 231 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 232 AKVITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 RS+ + + G F GF + I I L P+ A P ++ + L I + ++ + Sbjct: 292 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 Query: 360 D 360 + Sbjct: 352 E 352 >gi|254369661|ref|ZP_04985671.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] gi|157122620|gb|EDO66749.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] Length = 353 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 123/361 (34%), Gaps = 19/361 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 6 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P N + Sbjct: 124 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNIANIEPTNGKAYGIRKFMV 171 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 172 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISV 231 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 232 AKVITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 RS+ + + G F GF + I I L P+ A P ++ + L I + ++ + Sbjct: 292 RSSTLILKLLIGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSK 351 Query: 360 D 360 + Sbjct: 352 E 352 >gi|238761816|ref|ZP_04622790.1| Inner membrane protein yjgP [Yersinia kristensenii ATCC 33638] gi|238699930|gb|EEP92673.1| Inner membrane protein yjgP [Yersinia kristensenii ATCC 33638] Length = 364 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ +++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALITSALASVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDEVLNDARANPSLAALAGGQFKSSTDGNSALFIGNVTGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + + +Y + ++ + Q Sbjct: 181 GNQRPSVVVADSGHMIERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQAIIGHQEVQ 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + + A +F++ + + + ++ M L+ +S+ R + Sbjct: 241 QNNNVAEQM-----TMKQLWDSNKPDARAEFHWRLTLIVSVIIMALLVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G L P+ + +++++++ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNASGGKLDPLIWMWAVNGVYLAVAVIL 345 >gi|240850232|ref|YP_002971625.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] gi|240267355|gb|ACS50943.1| putative permease, YjgP/YjgQ family [Bartonella grahamii as4aup] Length = 396 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 114/360 (31%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K L ++ A+ + + + + N ++ + + VP Sbjct: 1 MRIIEFYILKRVLVLFSSVMIAAVGVSWTVQILARIN-FLTTSKQTLLTVLQFSLSLVPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +IPF ++ + +++ SEL + A G + P ++ +I+ + + N Sbjct: 60 VVFLVIPFALVIAITTILSAMHQDSELAVINASGFPKSTVWKPILLLAIVASCISFSIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 + ++ + + + + I +++ +++ + Sbjct: 120 FVVPQARLHMRQMLASAHFDLINLFINEGSFQKLANNLYIEIGERNPNGTLERLFIADQR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 I+ K+ ++ N +++ + + +L I D Sbjct: 180 DPKTDLFYYATDASIVSNKNGSFLVLNNGEIERVNHQNNSVSIVQFSSYTFSLGEFIPSD 239 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + S S+ + + + + P++ + L AA Sbjct: 240 KAPTLYPKDRSLSYLQNPDPKDPYYQRKPLQYKAEFHRRLTQWLYPIVFSLIALAAAGDV 299 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ I F++Y I K+ + ++P+ + + ++L Sbjct: 300 CSHRQARHSAN--FSAIALSFLVYWIGYFFAEKAKNDLAYIPLLYIMPIGTSAFVFFMLL 357 >gi|153822424|ref|ZP_01975091.1| conserved hypothetical protein [Vibrio cholerae B33] gi|126520067|gb|EAZ77290.1| conserved hypothetical protein [Vibrio cholerae B33] Length = 164 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 1/162 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL Y + + TT L+ + L +I E ++GE +Y + + + +P Sbjct: 1 MFKILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGE-GSYDLLQALLFVVLSIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ P L+ ++ L +SELV+ +A G S + + +I L I L+ Sbjct: 60 RDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI 162 A +K+ D+ G W + +N I Sbjct: 120 EWGAPQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFI 161 >gi|34763637|ref|ZP_00144566.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886690|gb|EAA23834.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 191 Score = 78.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 4/164 (2%) Query: 199 AIIYNDKVKLKKVVEYQYGRIPIDKNST---TLNIPIKMDGFQKFSEQFASRSFYEIIKK 255 DK V Y + L + + +E + E+ K Sbjct: 28 FDTDEDKWIFSNVNIYNVDTKETVTKTEYKSDLYKDDPSNFIRASAEDPRMLTIKELKKT 87 Query: 256 MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSG 315 + + P + I S S ++ R + + + + +G Sbjct: 88 IKEQKNIGE-DTRIYLAELAKRYSFPFASFIVAFIGLSASSKYVRGGRTTMNLVICVVAG 146 Query: 316 FMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + Y + ++ +GI+ P A+ IP IL + + I + + E Sbjct: 147 YGYYLVSGAFEAMSLNGIVNPFVASWIPNILYLIIGIYFMNRAE 190 >gi|157165310|ref|YP_001466458.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter concisus 13826] gi|112801662|gb|EAT99006.1| permease YjgP/YjgQ [Campylobacter concisus 13826] Length = 354 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 116/354 (32%), Gaps = 4/354 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY Y+K+ L L + IDL + N + Sbjct: 1 MKLYARYVGWVYIKSFLIVFLALELFYVGIDLLTNLKDLPPSANLQ----LLYVGLTALS 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++P + I++ N+ R++EL+ A+GIS +L+ P + + + IF V + Sbjct: 57 AISYVLPLSLIFALIILHVNMVRSNELISFYALGISKNKLILPPFLIAFFVTIFYVGLNF 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + S + + ++ + Sbjct: 117 TPFAYAHDYQKSIAKNTAFSKSTNDSFLKFEGKFIYIKELNSAKQRANDVRIFDINGTDL 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ + + + + N + + + G + + K + + Sbjct: 177 LSTTFADHAKFKDNEWVLEDVNQTFLPQNLELGENGFSKVKSENLDALRGFKPKSIESAA 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S+ + K+ A T FY L + P + LI R Sbjct: 237 SVENSKFNIPDAINFIKTFKNEGIGLDSARTAFYNLAITPFFAPFLLLIFYYHLPVTGRF 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + +++ ++ I+ F ++ ++LP ++PVIL + +I ++ Sbjct: 297 FNLALSTFIFVVITLVVWGLLFILTKFAQTSVILPEIGMVVPVILLFAYAIYLI 350 >gi|91214820|ref|ZP_01251793.1| putative permease [Psychroflexus torquis ATCC 700755] gi|91187247|gb|EAS73617.1| putative permease [Psychroflexus torquis ATCC 700755] Length = 516 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 1/162 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY ++KT L M++ + + + + + + +P Sbjct: 1 MKILDRYILVSFVKTFLSVFTILMLIFILQSVWRFIEEFAGK-DIDLEIISRFLLFLLPN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I ++P L+ +I+ F + E ++ GIS+ + + +V +LLG T N Sbjct: 60 LIPMVLPLTILLTSIMTFGSFAEQYEFAAMKSAGISLQRAMRSLIVFILLLGAVTFYFAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 + E +++ + + + N + Sbjct: 120 TVIPYAEGKVLNMRKNIAQVKPSLAIIEGAFNDMGNINIKVN 161 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 1/142 (0%) Query: 216 YGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY 275 +S P + + S I K + E + Sbjct: 342 NVYKDFSIDSLFWEYPYRQRSQIFNVATNSVNSITPQIISKKNQFKRKEILLNKIEMAMH 401 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 +P + + + A + R + + + + I + + G L Sbjct: 402 SKYALPFACIILFFVGAPLGA-IIRKGGLGLPMVIAVIVFLTYHFIGLFAGNSAEGGSLS 460 Query: 336 PVAAALIPVILTISLSILILLQ 357 P + + I+ LSI + + Sbjct: 461 PFLGSWLSTIILFPLSIYLTYR 482 >gi|317494176|ref|ZP_07952592.1| inner membrane protein yjgP [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917949|gb|EFV39292.1| inner membrane protein yjgP [Enterobacteriaceae bacterium 9_2_54FAA] Length = 366 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/351 (11%), Positives = 118/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ + L +++ F + I + + L VP + Sbjct: 2 IIIRYLVRETFKSQIAILFILLLIFFCQKMVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+V+ A G+ L+ ++ + + G F ++ + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEIVVMHACGLGKGVLIKTAMILAFITGAFALVNAFWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + + +F+G K +++ Sbjct: 121 SPWSSFHSDEVMAEAKANPGLASMVEGQFQPSKDGNYVLFVGDVKGKKFENVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + + ++ +Y + ++ + + Sbjct: 181 GTQRPSVVVADTGHMEGRPDGSQQVVLDTGTRYEGTALLRDFRITDFVNYEAVIGHQAVV 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + +F++ I + + M L+ +S+ R + Sbjct: 241 LNPSNADQ-----APMQALWDSNEKDFRAEFHWRITLVFSVFVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G + P + + L+I + Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNAAKGKIDPFIWVWVVNGFYLLLAIAL 345 >gi|330874292|gb|EGH08441.1| hypothetical protein Pgy4_05802 [Pseudomonas syringae pv. glycinea str. race 4] Length = 328 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 102/315 (32%), Gaps = 16/315 (5%) Query: 51 GAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSI 110 ++ R+P +Q I+P + ++ + L SE+ + A G+S +LL + + Sbjct: 1 MFLIMGFRLPGFLQVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPAT 60 Query: 111 LLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI------ 164 L+G+ + +A G LI + + + + + + + Sbjct: 61 LVGLLVAWLSFSLAPQGATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITYTKELSED 120 Query: 165 --GAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID 222 + S + + ++ + + L+ Y D Sbjct: 121 RSQLAGVFISEKRMSGDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAAD 180 Query: 223 KNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPL 282 + M + SE+ R + + R+ + + I +PL Sbjct: 181 YRVIKYDTYGAMLPKPEISEEITDREAIPTSELIGN-------PAPRSVAELQWRISLPL 233 Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + +TL+A +S R + + + I I+ ++S + G L Sbjct: 234 SVFIVTLMAIPLSRVNPRQGRY-LKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWW 292 Query: 343 PVILTISLSILILLQ 357 + +S+ +L+ Sbjct: 293 VHGIYLSIGLLLFYW 307 >gi|326796829|ref|YP_004314649.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] gi|326547593|gb|ADZ92813.1| permease YjgP/YjgQ family protein [Marinomonas mediterranea MMB-1] Length = 369 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 107/352 (30%), Gaps = 5/352 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+RY K L +T L ++++ + E S ++ VP IQ Sbjct: 3 LFRYLAKEVLVSTAGVTLILLLIILSGRFVNYLGRAAE-GKMSFEFLFIILGFHVPSFIQ 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I+P + ++ + L +E+ I + GIS +L + + LL + + V ++ Sbjct: 62 MILPLAFFLSLLLAYGRLYIENEMSILFSSGISKVKLTVYTLGIAGLLTLTSAFVNFWLS 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E Q+ + + + N+I+ Sbjct: 122 PYSEYQAELARQEQDQLTAFDFIQPGRFQGRGQQTTYVASFTPEEGWMNNIFLSDFVRKN 181 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + I + L ++ R + I + ++ Sbjct: 182 GRDIPVQTIAKNAEQIRLETEGGLNYLIFKDGVRYEGTPGAANYRIMEFDTYAIRLEDKA 241 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S N + + ++ I + +M+ + +I S+S R + Sbjct: 242 PGTIDKAYAVPTTALFNS---DNPKYIAELHWRIALVIMIPILAIIGVSLSQVNPRQGR- 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + I + ++ K+ + G + ++ L+ L Sbjct: 298 FFKMLPAILLMIVYLGLLIWGKTALEKGKIPLHLGLWWAHGTFAIIAYLLFL 349 >gi|297620918|ref|YP_003709055.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] gi|297376219|gb|ADI38049.1| putative permease, YjgP/YjgQ family [Waddlia chondrophila WSU 86-1044] Length = 371 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 129/371 (34%), Gaps = 14/371 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+WRY Y K + + ++ L+EI + P + + A ++P Sbjct: 1 MFPIIWRYLLSQYFKVMGLCVAAFIAVLLTSRLDEIAHFAVLSP--TPALAAQFILLQIP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ +IP L+ +I++ L+++ EL R+ GIS+ L P + S+L+ +I Sbjct: 59 YILPIVIPVSCLISSILLVQRLSKSHELTAFRSCGISLKDFLTPILFSSVLVAFINFYII 118 Query: 121 NPIATSGEKIGIDLIQQWKD-------NGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN 173 + ++T I ++ + + + + IL Sbjct: 119 SELSTYSHYQTIIWKEELRSTNPLHLLRNKHLMGAKGGFFNSLGDSKLGKNAGEVILALP 178 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL---NI 230 + + ++ + K+ + + + + + + TL Sbjct: 179 NKNQSRITLFLAKELISDDNFFEGTDVTMITAMPSGDPDSFDHLLVENAAKTKTLTDDFS 238 Query: 231 PIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 + K + + +N ++ ++ + + TL+ Sbjct: 239 QLMKQKQWKIGNDYLTMEQLLAKLYEEQANGFSVNDINCCYSEIIRRFSLGFSAFSFTLM 298 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + SR++ + + + T + I KS G++ L IP +L ISL Sbjct: 299 GLAFGISISRTHSL-KKILWVVLLAGGYITTLFIGKSAGQNLSLSLALYT-IPHLLIISL 356 Query: 351 SILILLQKEDG 361 S +L + G Sbjct: 357 SAAVLYRVNHG 367 >gi|149927923|ref|ZP_01916173.1| hypothetical protein LMED105_07563 [Limnobacter sp. MED105] gi|149823362|gb|EDM82595.1| hypothetical protein LMED105_07563 [Limnobacter sp. MED105] Length = 379 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/351 (9%), Positives = 98/351 (27%), Gaps = 10/351 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 F K + +T + ++ L Q + L + + Sbjct: 7 FRKDFAQTAGATFVALFTIIVTTVLVRTLGQAAG-GKVDNAEVFTLILLGGLQYLPAALV 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + + V + E+ A G+S++ L+ P + ++ L + ++ + + Sbjct: 66 ITVFIAVMGVVSRAFKEQEMTAWFASGVSLFSLVRPVLRFAVPLTVLALVCSVWLTPWAK 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSITIDKK 187 ++ D K + + + F ++ + S + Sbjct: 126 AELDAAKDRFAKRSDVSKVSAGQFRESGEGNRVFFVERQSEVTKQVENVFVVDSKGDTRT 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 R ++ + L ST + Sbjct: 186 VVSAARGSVEVDASGQPYLVLSGGRRATLDGTGERFTSTEFETYGLAIDNTLGAAPSFQL 245 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + ++ + + + + +P+ + + L+A ++ R Sbjct: 246 QHRRVDLLIADFSPAAQGELL-------WRVSLPMSALVLGLLAIPLAFVNPRGGNSLNQ 298 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + I+++ +S L A ++P + + L+++++ Sbjct: 299 LF-ALLIYLTYSNIVSVTQSMVTKETLDFWVALVLPHASVLLMFYLLMVKR 348 >gi|146340304|ref|YP_001205352.1| putative permease [Bradyrhizobium sp. ORS278] gi|146193110|emb|CAL77121.1| putative permease [Bradyrhizobium sp. ORS278] Length = 389 Score = 77.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 118/361 (32%), Gaps = 12/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + RY F+ L + L+ ++++ + + +I + +P Sbjct: 1 MGSIDRYIFRTTLASFALVLVSLTGVIWITQALRGID-LMTSQGQTILTFLGITGLVIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S +L PF + ++ + L+ + Sbjct: 60 LLGVIAPIALMIAVSHTLNKLATDSEIIVMNAAGMSPIRLFVPFAYATCVVALLVTLLAS 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA G + + + + Q+ + +I D Sbjct: 120 YIAPDGLRRIKQWDAEITADVLTNILQPGRFAQLDQNLTIRIGERQPGGELKNILIDDRR 179 Query: 182 ITIDKKNKI----IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ I K+AD + + + L++ + + ++ + Sbjct: 180 DPKERITIIAEKGTVVKNADGSFLVLEDGNLERFEIGKREPAMVAFARYAFDMSKFSNQG 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV--S 295 + + R +E++ + + + + + P+ A + + + Sbjct: 240 RDVTLGIRERYVWELMAPAED-DPIYKQIPGQFRQELHDRFLAPIYPFAFAALTFAFLGA 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +R ++ I + F + P+AA + V+L L++ I Sbjct: 299 PRTTRQSRN-FSFGSAILAVFGVRMAGFACSVMTVK---TPIAALIQYVMLFGVLALSIW 354 Query: 356 L 356 + Sbjct: 355 I 355 >gi|260062764|ref|YP_003195844.1| hypothetical protein RB2501_14279 [Robiginitalea biformata HTCC2501] gi|88784332|gb|EAR15502.1| hypothetical protein RB2501_14279 [Robiginitalea biformata HTCC2501] Length = 559 Score = 77.8 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 33/276 (11%), Positives = 75/276 (27%), Gaps = 6/276 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L + M +F+ + I +P Sbjct: 1 MRILDQYILKRFLTNFFSSFVILMF-IFIFQTIWLFIDDLAGKGLDIIIIGKFLFYLMPN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++++P L+ +I+ F E +A GIS+ + + P +V LLG T N Sbjct: 60 LTEKVLPLTVLLSSILTFGAFAENYEFAAMKASGISLQRSMLPLIVFVSLLGFVTFYFAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E+ +L + + + +K + E+ Sbjct: 120 TVIPISEQKIYNLRRNIATLKPAAVITEGVFSDFEGKNIKVD---RKYGENDRFLENVVI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + A + + + +++ T + + + Sbjct: 177 HEKSNLQRNTTVIKAATGELISGEG--SDIIQLVLRDGHYYHEMTQASGSNQRTHPFAKA 234 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + + M R + Sbjct: 235 DFDTYIMNIALPDNMEDLEADRNVETDRMKNVSRLR 270 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + R + + L + + + A + R + + I Y Sbjct: 434 SYKRYNRHILSLHNKFALALSCIILFFVGAPLGA-IIRKGGLGLPMVVAIVLFLAYYFFG 492 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ K G + PV A +P ++ + L + + + Sbjct: 493 VFSNNYAKEGNIPPVLGAWLPTMIMLPLGVWLTRR 527 >gi|327398670|ref|YP_004339539.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] gi|327181299|gb|AEA33480.1| permease YjgP/YjgQ family protein [Hippea maritima DSM 10411] Length = 348 Score = 77.8 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 115/358 (32%), Gaps = 13/358 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +Y ++LKT L ++L + D + + SI P Sbjct: 1 MKKIHKYITIFFLKTFFISLAFFVLLFVLSDFFSNLSDIVG-NGVSIKYIISYYVYYTPF 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II +PFI + ++V L+ +E+++ R+ G+SI+++ P + SI++ + Sbjct: 60 IIYFSLPFIFALSSLVSLGYLSSKNEIIVMRSSGLSIFKIAKPVLFFSIIVAVLMFASKE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I G + + + N + + + + Sbjct: 120 LIVNYGLEKASFVKHYYFKNKQFKLGWTKVGNMFIKVNGLNVTNNMAYNVTAYRVDKDFN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + I + + + K+ + F Sbjct: 180 RVEAIITAKRVKFKPKEIIFIDGC-----------SFNMPNFSQGRCFKDFKIKTNKSFY 228 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE-FSR 300 F+S F E K + + + V P + +TLI+ L+ R Sbjct: 229 SLFSSSKFKEPSIKSLVFSYKHSLDKDYYLSLIIHRFVYPFSCIILTLISFVFVLKTNPR 288 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 V + + ++ S G+ ++ P + +I ++ +S+S+ LL+ Sbjct: 289 RGGFVKNVFSSSLVFLVYIGSLELISSMGRYSMVDPNISIVIFILFWLSVSVYNLLKL 346 >gi|317051998|ref|YP_004113114.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] gi|316947082|gb|ADU66558.1| permease YjgP/YjgQ family protein [Desulfurispirillum indicum S5] Length = 342 Score = 77.8 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 38/357 (10%), Positives = 110/357 (30%), Gaps = 21/357 (5%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M RY + L +++ L + + E S+ A L +P Sbjct: 1 MLSTWQRYLLRECFFYFFAALASLSLIMASNSLIRMGSSTLEK-GISLMSLAQLTLLSLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 IP L+ + + LNR++E+VI + GIS + ++ + S ++ + Sbjct: 60 STAFITIPVSALIAAMALSSALNRSNEMVILYSAGISPFGIMKVILFASTVITGIAIANS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A K + +N + + ++ + + ++ + + + Sbjct: 120 FVLAPLASKQIQHVYADMAENVSYRVILPGVFNKLGDTTLFYYHLGREGFHDVMVAQGDL 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ + + + L + V ++ + + + +D + Sbjct: 180 VLSARSGSLVQGDESMVLLLRDGTIVDARQGQSFT------RFAVHEIPLETAVDSLRLS 233 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + ++ + + + + + ++ + R Sbjct: 234 YSMMSVEQLRQLKGSKAILEI-------------HKRYALSVSTLLFGVLGFMLGARGGR 280 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 S + V + Y I I +G++ P I + ++++ + + Sbjct: 281 SGK-GASVLTSLMVVLAFYLIRAIGVHSMDAGLIAPQQVEWIGPGVMAAVTVFVYFR 336 >gi|88810918|ref|ZP_01126174.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88791457|gb|EAR22568.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 358 Score = 77.8 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 33/356 (9%), Positives = 103/356 (28%), Gaps = 8/356 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + + ++ + + A++ A R + Sbjct: 1 MLLIERYLIAEVRRPLVAVVGVLSLIFASYSVARYLADALSET-LGMQAVALMVALRTLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +IP ++ L E+ + A+GIS ++ ++ ++ + + + Sbjct: 60 ALEVLIPVALYASVVIGLGRLYNDQEMTVLGAVGISSARVYWAILLLALPVALAVGALSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + S + I Sbjct: 120 FGRPWAYQQAYQAEAHAHVEIPLDRLRAGHFYVESQTGRMILAQEVDDQRGLLHGVLIYQ 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + R+ L D+ +L + + +D+ + I + + Sbjct: 180 RAGEATYLTKARQARQLPTEQADEARL---ILHDGVTYLLDQAGSHDRILRFGELSLRLQ 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + +S + + + PL V + L +S R Sbjct: 237 QPQPVVGYKRKAAPTAALARSGNPAEL---AELQWRLSRPLTTVLLALFGVPLSRTAPRR 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I+ + ++Y+ + K++ + G++ V + + + ++ Sbjct: 294 GRFSKILLAALVYA-LIYSASGLAKTWVEHGVVGAVPGIWWINAVMFVVLVALISH 348 >gi|83953614|ref|ZP_00962335.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] gi|83841559|gb|EAP80728.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1] Length = 376 Score = 77.8 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 36/363 (9%), Positives = 107/363 (29%), Gaps = 15/363 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY +L +F L + + ++ + +++ + +P +I Sbjct: 4 FDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIG-DGQTALVFLEFTVLGLPKLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P T ++ V + SEL + +A G S W+L P V + + I ++ + + Sbjct: 63 TVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHLLL 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK------ILPENHIWED 178 + + N + ++ ++ + + D Sbjct: 123 PLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRNPD 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + I + +I D I+ + +++ + +I + + Sbjct: 183 ESVIYTASEAYLIRNGDGTTLIMVDGMA--QRLEMAGKRLSTAKFRDFSFDISSLVSSDK 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLE 297 ++ + + E+ + + + +I A++ L Sbjct: 241 PRTQSIDAMTTAEMFAQWDQLETITKSSAGDIAEELAQRFSSAAFCMIAAMIGYATLVLG 300 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK--SGILLPVAAALIPVILTISLSILIL 355 + L + + + + + +P ++ + I ++ Sbjct: 301 GFSRFGVWREIVIAFGLLIALDGLRGTLVDTVRDDASRWPLL---FLPSLIGAVIVIGMI 357 Query: 356 LQK 358 Q Sbjct: 358 WQT 360 >gi|294637821|ref|ZP_06716093.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] gi|291089020|gb|EFE21581.1| inner membrane protein YjgP [Edwardsiella tarda ATCC 23685] Length = 366 Score = 77.8 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 114/341 (33%), Gaps = 7/341 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ + L +++ F + I + + + L +P + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKMVRILGAVVN-GDIPTNLVFSLLGLGIPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ +V + G + + Sbjct: 61 QLILPLSLFLGLLMTLGRLYTESEITVMHACGLGKSVLIKAAMVLAFFTGALALANAFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + + +F+G K + ++ + Sbjct: 121 SPWSSLHSDEVMAEAKANPGLASLAEGQFQPSQDGNYVLFVGNVKDKKFHDVFLAQLRPS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ L + + K+ +Y + ++ + S Sbjct: 181 GSQRPSVVVADSGHLVEMKDGGQKVVLDSGTRYEGTAMLRDFRITDFVDYSALIGHKSTM 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + +F++ + + ++ M L+ +S+ R + Sbjct: 241 LDPNNADQ-----ASMSALWHSDEPSFRAEFHWRLTLVFSVLVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + + + + + + + ++S G G L P+ Sbjct: 296 V-LSMLPAMLLYLIFFLLQSSLRSNGGKGKLDPMIWMWAVN 335 >gi|226329629|ref|ZP_03805147.1| hypothetical protein PROPEN_03539 [Proteus penneri ATCC 35198] gi|225202815|gb|EEG85169.1| hypothetical protein PROPEN_03539 [Proteus penneri ATCC 35198] Length = 343 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 114/330 (34%), Gaps = 7/330 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M++ F L EI N + L +P + Q I+P + ++ + L Sbjct: 1 MLIFFSQKLVEILG-AAVEGNIPTNLVVSLLWLGIPEMAQLILPLSLFLGLLMTYSKLYV 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 SE+ + A GI L+ ++ S+L + + +++ K N Sbjct: 60 ESEITVMNACGIGKKALVQAALLLSLLTSALAAGNVIWLIPWSSVHQEQVLEDAKANPSL 119 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 + S+ +++G+ K ++ T D++ ++ + N Sbjct: 120 AALMEGQFKMSSDRNMVLYLGSVKGNQFQDVFLAQLRPTQDQRPSVVVADKGYTKELPNG 179 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI 264 + +Y + ++ + + + ++ Sbjct: 180 NQIVVLSEGTRYEGTAVLRDFRITDFNDYQAVIGHRES-----TINRNRVEQKTMSELWH 234 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + + +F++ + + +V M ++ +S R + + + + + + + + Sbjct: 235 SNETESIAEFHWRLTLIFSVVIMAVMVVPLSEVNPRQGRV-LSMLPAMLLYLVFFLLQSS 293 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILI 354 + S G+ G + P+ A + ++L+IL+ Sbjct: 294 LHSNGEKGKVDPLIAMWSVNGVYLALAILL 323 >gi|163868028|ref|YP_001609232.1| hypothetical protein Btr_0827 [Bartonella tribocorum CIP 105476] gi|161017679|emb|CAK01237.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 396 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 109/360 (30%), Gaps = 9/360 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K L+ A+ + + + + N ++ + + VP Sbjct: 1 MRIIEFYILKRVFFLFSSVLIAAVGVSWTVQILARIN-FLTTSKQTLLTVLQFSLSLVPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +IPF ++ +N+ SEL + A G + P ++ +I+ + + N Sbjct: 60 VIFLVIPFALVIAVTTTLSAMNQESELAVINASGFPKSTVWKPVLLLAIVASCISFSIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + + Q I IG + Sbjct: 120 FVVPQARLHMRQMLASAHFDLINLFISEGSF-QKLANNLYIEIGERNPNGTLERLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDG 236 K + ++ + L + ++ T ++ + Sbjct: 179 RDPKTDLFYYATKASIVSNKNGRFLILNNGEIERVNHENNSVSIVQFSAYTFSLGEFIPS 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + RS + + + + +F+ + L + +LIA + + Sbjct: 239 DKTPTLYPKDRSLSYLQNP-DPKDPYYQRKPLQYKAEFHRRLTQWLYPIVFSLIALAAAG 297 Query: 297 EFSRSNQPRIIV-AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 Q R I F++Y I K+ + + P+ ++ + ++L Sbjct: 298 NVGSHRQARYCANFSAIALSFLVYWIGYFFAEKAKNDLAYVPLLYITPIGTSLFVFFMLL 357 >gi|56708376|ref|YP_170272.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670846|ref|YP_667403.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|134302361|ref|YP_001122330.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis WY96-3418] gi|224457506|ref|ZP_03665979.1| YjgP/YjgQ permease [Francisella tularensis subsp. tularensis MA00-2987] gi|254370999|ref|ZP_04987002.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254875199|ref|ZP_05247909.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604868|emb|CAG45952.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321179|emb|CAL09335.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC198] gi|134050138|gb|ABO47209.1| putative permease YjgP/YjgQ family [Francisella tularensis subsp. tularensis WY96-3418] gi|151569240|gb|EDN34894.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis FSC033] gi|254841198|gb|EET19634.1| permease yjgP/yjgQ family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159995|gb|ADA79386.1| putative permease YjgP/YjgQ family protein [Francisella tularensis subsp. tularensis NE061598] Length = 360 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 33/349 (9%), Positives = 97/349 (27%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 121 NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F I + ++ +L+A ++ R N+ Sbjct: 239 YNHDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + + + +P I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAV 346 >gi|49474101|ref|YP_032143.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] gi|49239605|emb|CAF25962.1| hypothetical protein BQ04630 [Bartonella quintana str. Toulouse] Length = 396 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 113/361 (31%), Gaps = 11/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K L ++ A+ + + + + N ++ + + VP Sbjct: 1 MRIIELYILKRILILFSAVMIAAISISWTVQILARIN-FLTTSRQTLLTVLQFSLSLVPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +IPF ++ +N+ SEL I A G + P ++ +++ + L+ N Sbjct: 60 VIFLVIPFALVIAITSTLSAMNQDSELAIISAAGFPKSTVWKPILLLALIASCASFLIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ + + + Q I IG + Sbjct: 120 FVAPQARFHMRQMLANAHSDLINLFINEGSF-QKLANNLYIEIGERNPDGTLGRLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K + ++ + + L + + + +F Sbjct: 179 RDPKIDFFYYATKASIVSNKSGNFLVLNNGEIERINHQNDSVSIVQFSFYTF--SLSEFI 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNY------RAETQFYFLIVIPLMLVAMTLIAASVS 295 + + Y + +S+ + Y + +F+ + L + +LIA + + Sbjct: 237 PNDKTPTIYPKDRPLSYLLNPDPKDPYYQRRPLQYRAEFHRRLTEWLYSIVFSLIALAAA 296 Query: 296 L-EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S I ++Y I KS + + P+ ++I + ++ Sbjct: 297 RDARSYRKTRNFANFSAIAFSLLVYWIGHFFAEKAKSDLAYVPLLYITPIGVSILVFFML 356 Query: 355 L 355 L Sbjct: 357 L 357 >gi|206889444|ref|YP_002249741.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741382|gb|ACI20439.1| putative permease, YjgP/YjgQ family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 369 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 126/360 (35%), Gaps = 22/360 (6%) Query: 10 FKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPF 69 K +++T L L L+ ++ L E + S + +P I +IPF Sbjct: 11 IKDFVRTFLVLLFSMSCLLSIVGLIEKIDDFMPYK-PSTTFFIEYGLYSIPRYIFYLIPF 69 Query: 70 ITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEK 129 +TLV ++ +F R+ E +I G + LL PF++ I++ I + + K Sbjct: 70 VTLVTSLFIFSIGVRSREFLILSVSGGRLRGLLKPFLILGIVISIVGFIFGEFLQPEFTK 129 Query: 130 IGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK 189 +I++ G + +D + + D I I K + Sbjct: 130 KLNFMIEELTQKGKSSIQKE-----LFVRAKDGTVIKIGKFSQQQKKADEVKIFIIKNDA 184 Query: 190 IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ--KFSEQFASR 247 +I R D+ A I D+ KLK + Y + ++K K ++ Sbjct: 185 LIKRIDSQEAEIEQDQWKLKNSIVYDFVAGKVEKYDLMDYPLNLKISIAAFKDIKKIEEF 244 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 E+I+K K N + +T + + M ++ S+ L Sbjct: 245 GIAELIQKRKELKKVG-LSNPKIDTDISSRLSYNFVTFFMMILGMSLPLGAYEKFNFLFS 303 Query: 308 -------------VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V G+ + + + ++ G S IL P + I ++ +SI + Sbjct: 304 KGKGGSAAGGIITVGIGLVITIIYWLVYSLFMFMGYSKILPPFISPWITPLIFGFVSIKL 363 >gi|83942394|ref|ZP_00954855.1| membrane protein, putative [Sulfitobacter sp. EE-36] gi|83846487|gb|EAP84363.1| membrane protein, putative [Sulfitobacter sp. EE-36] Length = 376 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/363 (9%), Positives = 106/363 (29%), Gaps = 15/363 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY +L +F L + + ++ + +++ + +P +I Sbjct: 4 FDRYMLSQFLILFSFFALILVAIFWINRAVVLFDRLIG-DGQTALVFLEFTVLGLPKLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P T ++ V + SEL + +A G S W+L P V + + I ++ + + Sbjct: 63 TVLPIATFAGSVYVINRMTSESELTVLQATGTSPWRLARPVFVYGLCVAIMMSVLTHLLL 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK------ILPENHIWED 178 + + N + ++ ++ + + D Sbjct: 123 PLSNGQLSEREAEISQNVTARLLTEGTFLHPTSKVTFYTRVIDADGVLRDVFLSDRRNPD 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 I + +I D I+ + +++ + +I + + Sbjct: 183 EGVIYTASEAYLIRNGDGTTLIMVDGMA--QRLEMAGKRLSTAKFRDFSFDISALVSSDK 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLE 297 ++ + + E+ + + + +I A++ L Sbjct: 241 PRTQSIDAMTTAEMFAQWDQLETITKSSAGEIAEELTARFASAAFCMIAAMIGYATLVLG 300 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK--SGILLPVAAALIPVILTISLSILIL 355 + + + + + + + +P ++ + I ++ Sbjct: 301 GFSRFGVWREIVIAFGLLIAIDGLRGTLVETVRDDASRWPLL---FLPSLIGAVIVIGMI 357 Query: 356 LQK 358 Q Sbjct: 358 WQT 360 >gi|156502931|ref|YP_001428996.1| putative permease, YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253534|gb|ABU62040.1| putative permease, YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 360 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/349 (9%), Positives = 97/349 (27%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + I+ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIIICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 121 NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIHIGNKSGNTLSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F I + ++ +L+A ++ R N+ Sbjct: 239 YNHNRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + + + +P I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAV 346 >gi|92117863|ref|YP_577592.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] gi|91800757|gb|ABE63132.1| permease YjgP/YjgQ [Nitrobacter hamburgensis X14] Length = 389 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/361 (9%), Positives = 121/361 (33%), Gaps = 16/361 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + +Y F+ L + + L+ ++++ + + +I + + +P+ Sbjct: 1 MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGID-LMTSQGQTILTFLGITSLAIPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S ++L PF+ ++++ + + Sbjct: 60 LVLIISPIALMIAISHTLHKLATDSEIIVMNAAGLSPFRLFRPFIYATVVVALLVAFIAA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHI 175 +A G + + + + + I ++ I ++ Sbjct: 120 YLAPDGMRRLKRWDAEITADVLANVLQPGRFAQLDPNLTIRVRERQPGGLLVGIFIDDRR 179 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + ++ + I+ + ++ + + + + +N+ ++ + Sbjct: 180 NPNERLSIVADHGTVMKNDNGSFLILEDGHLERLEAGKREPNMVAFRRNAFDMSKFS--N 237 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV- 294 R +E+I ++ + + + P+ A + + Sbjct: 238 RGHDVVYGIRERYLWELIAP-EPTDPLVQQLPGQFRAELHDRFTAPIYPFAFAALTFAFL 296 Query: 295 -SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + +R ++ + I + F L + P+ L +L ++ + Sbjct: 297 GTPRTTRQSRN-FSMGAAIVTVFGLRMAGFALSVMAVKSPTAPLLQYL---LLFAAIGVS 352 Query: 354 I 354 + Sbjct: 353 L 353 >gi|89256769|ref|YP_514131.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|115315160|ref|YP_763883.1| hypothetical protein FTH_1434 [Francisella tularensis subsp. holarctica OSU18] gi|167010910|ref|ZP_02275841.1| hypothetical protein Ftulh_09393 [Francisella tularensis subsp. holarctica FSC200] gi|254368060|ref|ZP_04984080.1| hypothetical protein FTHG_01381 [Francisella tularensis subsp. holarctica 257] gi|254369660|ref|ZP_04985670.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] gi|89144600|emb|CAJ79919.1| Permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica LVS] gi|115130059|gb|ABI83246.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|134253870|gb|EBA52964.1| hypothetical protein FTHG_01381 [Francisella tularensis subsp. holarctica 257] gi|157122619|gb|EDO66748.1| permease YjgP/YjgQ family protein [Francisella tularensis subsp. holarctica FSC022] Length = 360 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 34/349 (9%), Positives = 97/349 (27%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + I+ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIIICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 121 NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F I + ++ +L+A ++ R N+ Sbjct: 239 YNHNRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + + + +P I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAV 346 >gi|163856081|ref|YP_001630380.1| hypothetical protein Bpet1772 [Bordetella petrii DSM 12804] gi|163259809|emb|CAP42110.1| putative membrane protein [Bordetella petrii] Length = 397 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 106/317 (33%), Gaps = 4/317 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 LAA + ++ + + R SE+V+ A G+S+ L Sbjct: 72 GTIGADVVLGLAAFSTITALPTVLAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLR 131 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 P + +I + ++ + + + ++++ D K + S Q +F Sbjct: 132 PVLRVAIPVAGLVAVLTLVASPWAYRQIAEYRERFEQRSDLSKVTAGQF-AESGEGQRVF 190 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + + + F T + + ++ A + N L ++Y P Sbjct: 191 FAEEPTQASDELGNVFARETGPEWHSVMTASSARIETEPNGDRFLVLGRGHRYDLKPGTP 250 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY--FLIVIP 281 ++ + S + + + + + + + + +P Sbjct: 251 EIRLVDFAKYGVRLESKSGDPIAEARAAAERSSKARPTMQLVADDTDSSWSQIMWRVSMP 310 Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 L + + L+A + R + ++ G+ G + +I + +++ SG L Sbjct: 311 LAALNLALLAIPLGAVNPRLGRSGDLLIAGL-VGLLYMNVINLSRAWISSGKLPFGIGVW 369 Query: 342 IPVILTISLSILILLQK 358 + ++L+ +L+++ Sbjct: 370 AVHAVVLALAGYLLMRR 386 >gi|257454352|ref|ZP_05619615.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] gi|257448255|gb|EEV23235.1| permease YjgP/YjgQ family protein [Enhydrobacter aerosaccus SK60] Length = 385 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 111/356 (31%), Gaps = 8/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + T LL M L+ L + + + +P + Sbjct: 10 ILRRYMTQQVAANTAIVLLFLMALMLGGRLIRYFG-IAAEGRLDVGLLFAIIGYNIPTFL 68 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++V + E+ + A GIS +L + L IF + + Sbjct: 69 ELILPLSFFIALMLVLGRMYVDQEMSVLFASGISRGRLTRLMIPLITGLFIFQMGISLLA 128 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW---EDFT 180 G + Q ++ N + K+ +++ + Sbjct: 129 KPWGLSNSKQIWQTQSLGSLLDLVRPKTFISSGNYHLYVDEFNKEKRELKNLYVVQQQTD 188 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 KN +I + D ++ +Q R + N+ N Sbjct: 189 KSGKIAKNDVIITATRAYQVPSKDTDSSMQLDLFQGRRYELGTNNAKYNQASFEKYRITL 248 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + ++ + + + + + +P +++ ++A ++ R Sbjct: 249 EKPASETITETNVETQTTAKLLAHTQKPEVKAELGYRFTMPWLIIIAAMLATPLAQVRPR 308 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + ++ + +II++ + GK + A ++ ++ +LL Sbjct: 309 QGRWLRLLPSVLIFASCAISIISLRTAIGK-ERISEYAYIW---LIVGFIAFALLL 360 >gi|260914418|ref|ZP_05920887.1| inner membrane protein YjgP [Pasteurella dagmatis ATCC 43325] gi|260631519|gb|EEX49701.1| inner membrane protein YjgP [Pasteurella dagmatis ATCC 43325] Length = 368 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 115/351 (32%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K K+ + L +++ F L + L +P + Sbjct: 2 ILTRYLIKEVFKSQIAILFILLLIFFCQQLVRVLGSAAN-GKVPADLVLSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+L + + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVRVVMLLSLLTASIATYNVFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 +++Q+ K N ++ ++ + +FI ++ D Sbjct: 121 TPWAINKQSEILQEAKANPTMGALAAGQFISTNSNEFVLFI----DKIVDNQINDVYLFQ 176 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + +++ + + D +Q + Sbjct: 177 TRERGNLKPAVLVAERGELKSLPNGDQILTLENSERVEGSAALPDFRITHFDEYQAYLGH 236 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + +++S + N A+ + + + + L + M LIA +S R + Sbjct: 237 QDINNEKNEAEELSVNELLNSTSPA-AKAELNWRVSLVLAVPLMALIAVPLSRVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ + ++ ++G SG L ++ L +L+ Sbjct: 296 FAKVLPALLLYLIYFLLQSSLKSAWG-SGKLDGAFLMPFVNLVFFMLGLLL 345 >gi|88800547|ref|ZP_01116109.1| hypothetical protein MED297_15285 [Reinekea sp. MED297] gi|88776692|gb|EAR07905.1| hypothetical protein MED297_15285 [Reinekea sp. MED297] Length = 353 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 123/355 (34%), Gaps = 13/355 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y K LL L+FV + + + Y++ + + + + + I Sbjct: 7 YLVKQTSLMVSIVLLAIAGLLFVTGIADEAAR-RMTDTYTLQSAVIYKFSTLSAEVYEYI 65 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 I ++ ++ + N+ EL I + S LL ++ +++L + A S Sbjct: 66 GVIVMLGTLITVASFNKHQELTIIQLSAASAPALLLRLLLPALILLPIVYGIGEFAAPSW 125 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + G+K + W + +N ++ + + T ++ + Sbjct: 126 QNNAEQARA--LLRGEKNPTLRGQWYKANNEYVNV-----EFISNETELTGITRFQMNPQ 178 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI----PIKMDGFQKFSEQ 243 +++ + A+ + L +E + ++ + ++ + + + + Sbjct: 179 KQLMAASYSKRAVYSDGSWVLINTIEVKRTERGFERKTMGISSWENAVFTPELVRNLALE 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + E+ ++ F ++ E + ++ PL + + +A + + R Sbjct: 239 SSNLTLPELWTQVRFRAEAGTLTPA-LERTLWNRVLFPLQYIGLMFVALAFAFGSFRQKT 297 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + G + +I + + + AA L+ L L+ +L ++ Sbjct: 298 IGDAAFKALVLGVISGLLIDTLSASLMVLAMPAFAAVLVSNSLFTGLAFYLLKRR 352 >gi|237729198|ref|ZP_04559679.1| YjgP [Citrobacter sp. 30_2] gi|226908927|gb|EEH94845.1| YjgP [Citrobacter sp. 30_2] Length = 366 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 119/351 (33%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ I + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTSIIAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSNFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQMRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + + I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMNMRTLWTTDTDRARAELTWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G L PV + ++L+I++ Sbjct: 296 V-LSMLPAMLLYLLFFLVQTSLKSNGGKGKLDPVFWMWTVNLAYLALAIVL 345 >gi|319788014|ref|YP_004147489.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] gi|317466526|gb|ADV28258.1| permease YjgP/YjgQ family protein [Pseudoxanthomonas suwonensis 11-1] Length = 361 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/362 (11%), Positives = 121/362 (33%), Gaps = 12/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++++ L L+ + + L ++ ++ + ++ Sbjct: 1 MPK-LDRYLLRDFVQSFLATLIVLLTVSLGGVLVDVLGEIAD-GGLPARLLLSQLGLQLL 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + ++P ++ ++ L R SE+ + A+G+ +LL P ++ + + + + Sbjct: 59 VYLPLVLPLALMLGLMLAVARLYRDSEMAVLNAVGVGPKRLLRPLLMAVVPVVVAVGMCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDF 179 + ++ ++I+Q + + + + N ++I G + Sbjct: 119 LWLGPWAQRTAANMIEQANRSLIVAGLEPGRFTSLPNGGGIVYIDGMSEDGRTLQGVFLQ 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + + ++L + L+ + + Sbjct: 179 RERDGRVDVVTARTGSLEFGGDRDRFLRLADGRRLEGPLEQG------LDFRLMRYAVNE 232 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + + ++ + A + + + PLM +A L+ ++ Sbjct: 233 VALPDRAEERADDDPAIAPTLSLFNDGRPAAIAELHGRLTPPLMALAFALLTVPLARSSP 292 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R + + G + + ++ I G L + ++L+I + L+ Sbjct: 293 RQQRYG-RLMLGFLAYLVGLNLMFIGVRMLADGKLPAPVGLWWLTLPLMALAIWLYLR-- 349 Query: 360 DG 361 DG Sbjct: 350 DG 351 >gi|113460662|ref|YP_718728.1| permease [Haemophilus somnus 129PT] gi|112822705|gb|ABI24794.1| conserved permease [Haemophilus somnus 129PT] Length = 367 Score = 77.4 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 125/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K ++ + L ++L F L + + L + +P + Sbjct: 2 ILIRYLTKEVFRSQIAILSILLLLFFSQQLVRVLGSAS-VGKIPADLVFALLSLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I P + ++ F L SE+ + RA G+ L+ ++ S+L + + Sbjct: 61 QLIFPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVGVALILSLLTAGLATYNVFYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + I LI K N ++ + N +FI K I+ Sbjct: 121 SPWAMQKQIQLIDDAKANPTMGALASGQFVNVGNTDVVLFINEIKNNQIQDIYVFQMENK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++K + + L ++ N L+ + + D T + ++ Sbjct: 181 KNQKPSVTVAETGQLKVLPNGDQVLSLENSQRVEGSALLPDFRITHFDQYQAYLDYKTTD 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + ++ + + + + ++ + + + M LIA +S R Sbjct: 241 KDTSETEILSLKELINSKSPAA-------KAELHWRLTLIFAVPIMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + +KS G SG + + I + L++L+ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSLKSAGASGKIEAHIFMPLVSIFFLFLAVLL 345 >gi|121602513|ref|YP_988823.1| YjgP/YjgQ permease [Bartonella bacilliformis KC583] gi|120614690|gb|ABM45291.1| putative permease, YjgP/YjgQ family [Bartonella bacilliformis KC583] Length = 396 Score = 77.4 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 111/364 (30%), Gaps = 11/364 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K + + +++ + + N + ++ +P Sbjct: 1 MRILELYILKRIFILFSAVITATVCIIWTVQILARIN-FLTTSGQTFLTALYFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +IPF ++ I +N+ SEL I A GI + P + +IL + + N Sbjct: 60 VISLVIPFALMIAIITTLSRMNQDSELTIISASGIPKTTIWKPILFLAILASCASFFITN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +++ + + Q I IG + Sbjct: 120 FVAPQARLHMREMLASAHSDLINLFIHEGSF-QKLTNNLYIGIGERYPDGTIGRLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDG 236 K A ++ + + L + +S T N+ + Sbjct: 179 RDPKIDLLYYATKGAIVSNKSGNILVLNNGEIKRLNHQNDSVSIIKFSSYTFNLSEFIPN 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS- 295 + + R + + + + + + +F+ + L + LIA + + Sbjct: 239 DRIPTIYPKDRPLSYLYRP-DPDDPNYQRQPLQYKAEFHRRLTEWLYPIVFALIAVAAAG 297 Query: 296 -LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + I ++Y + ++ + + P+ +I + + Sbjct: 298 DARSYRQARISTTFF-AIIFSLLIYLVRYFFVEKTENNLAYIPLLYITPLGTSILIFFRL 356 Query: 355 LLQK 358 L+ + Sbjct: 357 LINR 360 >gi|319408320|emb|CBI81973.1| conserved membrane hypothetical protein [Bartonella schoenbuchensis R1] Length = 396 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 113/362 (31%), Gaps = 13/362 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y K ++ A+ + + + + + ++ VP Sbjct: 1 MRIIELYILKRVFILFSAVMVAAIGISLTVQVLARID-FLTTSGQTFLTVLYFSSLLVPP 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I IIPF ++ + +N+ SEL I A G S +L P ++ +I + + N Sbjct: 60 VISLIIPFALVIAITTILSTMNQDSELAIISASGFSKNTVLKPILLLAIFTACTSFSIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A ++ + + + I IG + Sbjct: 120 FVAPQARLNMRQMLANTHSDLINLFIREGSFQAL-TNNLYIEIGERYPDGTIGRLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +K A ++ + + L + + N +F Sbjct: 179 RDSKIDLLYYAKKGAIVSNKNGNFLVLNDGEIERVNYQNDSVSIIKFNSYTF--SLSEFI 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNY------RAETQFYFLIVIPLMLVAMTLIAASVS 295 + Y + +S+ + + Y + + +F+ + L + LIA + + Sbjct: 237 PNNGVPTIYPKDRPLSYLLHPDPYDPYYQRNPLQYKAEFHRRLTEWLYPIVFALIAVAAA 296 Query: 296 --LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R IV I ++Y I K+ + + P+ +++ + + Sbjct: 297 GDARSHRQAHTSAIVFT-ITFSLLIYWIEYFFAEKTKNDLTYVPLLYITPIGVSVLIFFM 355 Query: 354 IL 355 +L Sbjct: 356 LL 357 >gi|115379865|ref|ZP_01466928.1| hypothetical protein STIAU_7243 [Stigmatella aurantiaca DW4/3-1] gi|115363124|gb|EAU62296.1| hypothetical protein STIAU_7243 [Stigmatella aurantiaca DW4/3-1] Length = 315 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 96/281 (34%), Gaps = 9/281 (3%) Query: 84 RTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGD 143 + E+ RA+ L P ++ + + + + ++ Q + Sbjct: 24 KRGEVTALRALTFGPASLYLPVGAVALAACLGLIAFDERVVAQASRRVDEITTQRFNRWG 83 Query: 144 KQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYN 203 + P + F+ + + D +T+ K+ R DAD + Sbjct: 84 DWRLYYTPKQWFRRGEHVFFLRSGSAQEG---FRDVAILTLTADFKLARRLDADTMVPLE 140 Query: 204 DKVK-LKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 L VVE + ++ + F + E+ +++S Sbjct: 141 GNRWRLTGVVERSFSPDGRTAVSAAPEAEYDLGVPARSFLIRPGRPEQMRLPELREQISA 200 Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 + + + E Y P+ + L+A ++L +R + + G+ + Sbjct: 201 RTEVG-LDSRQYELALYNRFAYPMAGLPAALVAVGLALRPNRKGHLTVAIVEGLLIAMAM 259 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + +I + K+ + + P AA +P + + ++ ++ L++E Sbjct: 260 WGLIVVSKTLVTTERMAPGLAAWLPSGVLVVVATVLWLRRE 300 >gi|299771880|ref|YP_003733906.1| permease YjgP/YjgQ family protein [Acinetobacter sp. DR1] gi|298701968|gb|ADI92533.1| permease YjgP/YjgQ family protein [Acinetobacter sp. DR1] Length = 366 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 122/355 (34%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + S + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFG-VAAQGRLDASILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + +++ + +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + L ++ ++ I+ + Sbjct: 121 TPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRATK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + +I K+A + ND + +V+ + I + T + Sbjct: 181 EDKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYT--QAEFQSYRLRLEND 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ +S + + ++ ++ + + P ++ +++ ++S R + Sbjct: 239 KDVKFESGDVEALSTTKLFSKTNDPVIRSELGWRLFGPFTIIIALMLSVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ IF L ++ +K+ L A V++ ++ + +K Sbjct: 299 YYRLIP-AIFIFSSLIVLMIAIKTRISKEELDIW--AYPAVLVVYGVAAALFSRK 350 >gi|255321867|ref|ZP_05363017.1| tRNA-I [Campylobacter showae RM3277] gi|255300971|gb|EET80238.1| tRNA-I [Campylobacter showae RM3277] Length = 353 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 107/348 (30%), Gaps = 5/348 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY Y K + + + ID+ M N + + + Sbjct: 6 RYVGWLYFKYFVILFIALTLFYVGIDILTNLKDMPASANLK----LLYFGLTSLTAVNYV 61 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + I F++ R++ELV A+GI +L+ P ++ + + V + Sbjct: 62 LPLALIFALITSKFSMIRSNELVSFYALGIDKNRLIKPPFYIALAITLIYVGLNFTPFAY 121 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + G ++++ + + + I + + + Sbjct: 122 AYEYGRNIVKLSNLSRTSSDIFLKFEGKFVYMDSLNPISGEAKDVRIFDIDSSNLRSATF 181 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 DA L + + + G + K + S + ++ Sbjct: 182 GESGKFIDDAWLLKEAKIVNLPQNIKLGEKGLDIKTPSGLKTLEGFKPKTIESASAENSA 241 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + + + I N +T Y L P M LI R + Sbjct: 242 ITISDAVDYILAFKDEGIGLNS-TKTTLYNLAFAPFFAPFMVLIIYYFLPVTGRFFNLAL 300 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + ++ + +M F ++G++ P L+P+IL + + + Sbjct: 301 KSFIFTIASLCVWGALFVMMRFARNGVVSPEIGVLLPIILLGAYAFYL 348 >gi|213963082|ref|ZP_03391340.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] gi|213954166|gb|EEB65490.1| permease YjgP/YjgQ family protein [Capnocytophaga sputigena Capno] Length = 508 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 73/253 (28%), Gaps = 1/253 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY +LK L L +++ + +++ + +P Sbjct: 1 MKIIDRYIITQFLKNFLGALSILILIFVFHTIFTYIDELAGR-GLELWIIFKFLIYFIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I+P ++ +I+ F + + E +A GIS+ +++ P ++ LL I T + N Sbjct: 60 LIPIIMPLAVVIASIMTFGSFAESYEFAAMKASGISLMRVMRPLIILMALLSIGTFFLAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + L + I + Sbjct: 120 NVIPVAYREVYTLRSNIAKVKPAMAIAEGVFSNIGEDISIKVGKKSGDNDQFLESVLIHK 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T D+ N+ + +++ K +T F Sbjct: 180 KTPDRVNRTVINAKRGELKSAKSNPNFLQLILEDGTYYEDIKTNTYETQQKMPFAKVHFK 239 Query: 242 EQFASRSFYEIIK 254 + + + Sbjct: 240 KYVINLDLSHLNN 252 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 1/92 (1%) Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 + + + +AA + R + + + + Y I MK Sbjct: 373 MNLHIMNLSDKFALTIACFVLFFVAAPLGA-LIRKGGIGLPLVFAMILFLSYYFIGMFMK 431 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + ++ + P A IP ++ + L I + + Sbjct: 432 NIAENNTINPALAPWIPALILMPLGIYLTARI 463 >gi|238787644|ref|ZP_04631442.1| Inner membrane protein yjgP [Yersinia frederiksenii ATCC 33641] gi|238724431|gb|EEQ16073.1| Inner membrane protein yjgP [Yersinia frederiksenii ATCC 33641] Length = 364 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 121/356 (33%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ +++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGMGKKSLIMAALILALVTSALAAVNTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K +++ + N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDEVLTDARANPSLAALAGGQFKSSTDGNSALFIGNVSGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQ---YGRIPIDKNSTTLNIPIKMDGFQ 238 +++ ++ + + L K Y+ R + I Q Sbjct: 181 GNQRPSVVVADSGHMTERPDGSQVVILNKGTRYEGTALLRDFRITDFVDYQTIIGHQEVQ 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + ++ A +F++ + + + +V M L+ +S+ Sbjct: 241 QDNSVAEQMTMRQLWHATE----------PDARAEFHWRLTLIVSVVIMALLVVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + + + + T ++S G L P+ ++L++L+ Sbjct: 291 PRQGRV-LSMLPAMLLYLIFFLLQTSLRSNASKGKLDPLVWLWAVNGAYLALAVLL 345 >gi|170718034|ref|YP_001785074.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] gi|168826163|gb|ACA31534.1| permease YjgP/YjgQ family protein [Haemophilus somnus 2336] Length = 367 Score = 77.0 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 124/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K ++ + L ++L F L + + L + +P + Sbjct: 2 ILIRYLTKEVFRSQIAILSILLLLFFSQQLVRVLGSAS-VGKIPADLVFALLSLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I P + ++ F L SE+ + RA G+ L+ ++ S+L + + Sbjct: 61 QLIFPLCLFIAILLTFGRLYAESEITVMRACGVGQRILVGVALILSLLTAGLATYNVFYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + I LI K N ++ + N +FI K I+ Sbjct: 121 SPWAMQKQIQLIDDAKANPTMGALASGQFVNVGNTDVVLFINEIKNNQIQDIYVFQMENK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++K + + L + N L+ + + D T + ++ Sbjct: 181 KNQKPSVTVAETGQLKALPNGDQVLSLENSQRVEGSALLPDFRITHFDQYQAYLDYKTTD 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + ++ + + + + ++ + + + M LIA +S R Sbjct: 241 KDTSETEILSLKELINSKSPAA-------KAELHWRLTLIFAVPIMALIAVPLSRVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + +KS G SG + + I + L++L+ Sbjct: 294 GRFAK-ILPALLLYLIYFLLQSSLKSAGASGKIEAHIFMPLVSIFFLFLAVLL 345 >gi|291296718|ref|YP_003508116.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471677|gb|ADD29096.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 346 Score = 76.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 109/343 (31%), Gaps = 13/343 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY K + L L ++ + L E+ + + A RVP Sbjct: 1 MSVLDRYLIKEVGASVLGALAVVVLALLGGALYEVLAPLLAR-GADPWVVSQYLAFRVPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + P L ++V + SEL A G+S ++L P ++ LL + + + Sbjct: 60 ALVRGAPLAFLFALLLVLSRMGEESELKAMLAGGVSKLRVLFPLLLLGTLLFVICLAAAD 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + G ++++Q + I + + I + Sbjct: 120 SLVPRSLQQGQNVLRQAVLQKPRALLQPGT----RLVDAYGRIVYVGEVSDAGIGQVRVI 175 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + R + ++ P ++ + Sbjct: 176 TAEEILVAEQGRFEQGTLVLSQGMRVTYGG------ARPRTVARFERATVPLVELSLEPP 229 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S + E+ ++++ + ++ T + P + + + A ++ F Sbjct: 230 GGLFSLTVAELRQRIAQYRAQGLPYHAE-LTALHRKWAEPAAVYSFAIFAVGLAF-FLLG 287 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + + + F+ Y ++ + G+ G+L P+ AA P Sbjct: 288 GSRSLGMLGVVVLTFIYYATWSVGRIMGEQGVLHPILAAWGPN 330 >gi|293610039|ref|ZP_06692340.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827271|gb|EFF85635.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 366 Score = 76.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 123/355 (34%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + S + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFG-VAAQGRLDASILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + +++ +F +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVFQSVLMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + L ++ ++ I+ + Sbjct: 121 TPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + +I K+A + ND + +V+ + I + T + Sbjct: 181 EDKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYT--QAEFQSYRLRLEND 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ +S + + ++ ++ + + P +V +++ ++S R + Sbjct: 239 KDVKFESGDVEALSTTKLFSKTNDPVIRSELGWRLFGPFTIVIALMLSVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ IF L ++ +K+ L A V++ ++ + +K Sbjct: 299 YYRLIP-AIFIFSSLIVLMIAIKTRISKEELDIW--AYPAVLVVYGVAAALFSRK 350 >gi|262370181|ref|ZP_06063508.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315220|gb|EEY96260.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 366 Score = 76.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 119/355 (33%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFG-VAAQGRLDAGILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + +++ +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLGRLLIPMTVVFLAVQAVLMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A G + L ++ ++ I+ + Sbjct: 121 APWGVRQFEQLTTSQAVRTGFDLVRPKEFISSGPYTIYAGDLSEDRKNLKDIFFYQRAEA 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K + +I K+A I ND + +V+ + I + + Sbjct: 181 EGKPDVMILAKEATRVEIENDPANVVDLVQGRRYEIYP--GQPRYSQAEFQSYRLRLEND 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ ++ +S + ++ ++ + I +P +V L+A ++S R + Sbjct: 239 KEAKFESADVEALSTMKLWDNRNDPVVASELGWRIFVPFAIVVALLLAVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + ++ ++ I K + A +++ +++ + +K Sbjct: 299 YLKLFPALLIFASLIVALMAIKTRVSKEEV---GIGAYPLILVIYAIAAALFSRK 350 >gi|262280663|ref|ZP_06058446.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257563|gb|EEY76298.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 366 Score = 76.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 121/355 (34%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVISLLTLIMMGGRLIKYFG-VAAQGRLDAGILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + +++ + +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPITLVYMVCQSVLMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + L ++ ++ I+ + Sbjct: 121 TPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + +I K+A + ND + +V+ + I + T + Sbjct: 181 ADKPDVMILAKEATRVEVANDTANVVDLVQGRRYEIFPGQPKYT--QAEFQSYRLRLEND 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ +S + + ++ ++ + + P ++ +++ ++S R + Sbjct: 239 KDVKFESGDVEALSTTKLFSKTNDPVVRSELGWRLFGPFTIIIALMLSVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ IF L ++ +K+ L A V++ ++ + +K Sbjct: 299 YYRLIP-AIFIFSSLIVLMIAIKTRISKEELDIW--AYPAVLVVYGIAAALFSRK 350 >gi|296104924|ref|YP_003615070.1| permease YjgP/YjgQ family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059383|gb|ADF64121.1| permease YjgP/YjgQ family protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 359 Score = 76.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 118/344 (34%), Gaps = 7/344 (2%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + LK+ L L +++ F L +I + + L +P + Q I+P Sbjct: 2 RETLKSQLAILFILLLIFFCQKLVKILGAAVD-GEIPTNLVLSLLGLGIPEMAQLILPLS 60 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 + ++ L SE+ + A G+S L+ ++ ++ GI + + + Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILALFTGIVAAVNVMWAGPMSSRH 120 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 +++ + K N + Q ++ +FI + N ++ + + + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATDGNSVLFIESVDGSKFNDVFLAQLRTKGNARPSV 180 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 + LA + + ++ + ++ + + + Sbjct: 181 VVADSGQLAQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIIG-----HQAVALD 235 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 + RA +F++ I + + M LI +S+ R + + + Sbjct: 236 PTDTEQMDMRTLWNTDTDRARAEFHWRITLVFTVFMMALIVVPLSVVNPRQGRV-LSMLP 294 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + T ++S G G L P+ L I L++ + Sbjct: 295 AMLLYLIYFLLQTSIRSNGAKGKLDPMVWTWFVNSLYILLALGL 338 >gi|126640322|ref|YP_001083306.1| hypothetical protein A1S_0229 [Acinetobacter baumannii ATCC 17978] Length = 266 Score = 76.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 84/267 (31%), Gaps = 3/267 (1%) Query: 91 SRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDII 150 R++GIS+W+++ + ++LL + + + + + + + Sbjct: 1 MRSVGISLWRIVGWVMRSALLLIVLSFALSEWVVPYTNEKAQSVKS--HRSVAALGEVKG 58 Query: 151 PWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK 210 W + I + + DF + + + + + Sbjct: 59 YWSREGQRFIYIDYANSQGNLRDIQVVDFNKDYHLQSLINAEQGKFIQDGQWTLQKASQM 118 Query: 211 VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + I + + +L + ++ + S ++I M + ++ + Sbjct: 119 DILTDGNSILNNHDQQSLGLALQPKYVHMVTLDPEDLSPSQLISFMRYMDEYSQVPKT-Y 177 Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 + F+ + P L+ + L+A S R + +F G Y + + Sbjct: 178 QLAFWQKVASPFSLITLVLVACSFIFGPLRQQSMGFRLVIALFIGLGFYYLQDFLGYASL 237 Query: 331 SGILLPVAAALIPVILTISLSILILLQ 357 P L+P+IL +L + Sbjct: 238 VYAPSPAWFVLMPIILMFGAGSYLLYR 264 >gi|325292487|ref|YP_004278351.1| permease protein [Agrobacterium sp. H13-3] gi|325060340|gb|ADY64031.1| putative permease protein [Agrobacterium sp. H13-3] Length = 389 Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 113/356 (31%), Gaps = 4/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ I + + N + + S+ LA +P Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDT-GQSMGSFMALATMILPT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I ++PF ++ F +N SEL I A G S + P ++ + +L + + N Sbjct: 60 LIPVVLPFALVIGITQTFTAMNNDSELAIIDAAGSSRSVMFRPVIILAAVLSALSFTITN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I ++ + + + + + + + + D Sbjct: 120 FIEPPARNSARQMVAAAYADLLSSVIEEKTFRAVQDGLYVQIAQRQGRILKGLFVADRRD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + + + + S ++ + Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPDGKVSIVKFLSYAFDLSTMSEKQTSEP 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS--LEFS 299 + + +N S ++ + + + A LI+ ++ Sbjct: 240 SLSPGDASLGFLLSPDENNASYKRSPESFRSELHKRLSDWMFAFAFALISLVIAADARSH 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + +VA + + + + + +S +P+ A +P + + + +++ Sbjct: 300 REARMHPMVAALVTAFMLRWLGFYVTNQVKQSAAFIPLVYA-VPGLSGAAAAFILI 354 >gi|223038562|ref|ZP_03608855.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267] gi|222879964|gb|EEF15052.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267] Length = 353 Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 103/348 (29%), Gaps = 5/348 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY Y K + + + ID+ M N + + + Sbjct: 6 RYVGWLYFKYFVILFVALTLFYVGIDILTNLKSMPASANLK----LLYFGLTSLTAVNYV 61 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + I F++ R++ELV A+GI +L+ P ++ + V + Sbjct: 62 LPLSLIFALIASEFSMIRSNELVSFYALGIDKNRLIKPPFYIALTITFVYVGLNFTPFAY 121 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + G ++++ + + + I + + Sbjct: 122 AYEYGRNIVKLSNLSRTSSDIFLKFEGKFVYMDSLNPISGEAKDVRIFDINGSNLRSATF 181 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 D L + + + G K + + + ++ Sbjct: 182 GLSARFVDDLWLVKQAKIVNLPQNIKLGEKGLDIKRLGELKTLENFKPKTIENAAAESSA 241 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + + + I N +T Y L P M LI R + Sbjct: 242 ITISDAVDYIQAFKNEGIGLNS-VKTTLYNLAFSPFFAPFMVLIIYYFLPVTGRFFNLAL 300 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + ++ + +M F ++G++ P L+PVIL + + + Sbjct: 301 KSFIFTIASLCVWGALFVMMRFARNGVISPEIGVLLPVILLGTYAFYL 348 >gi|89094618|ref|ZP_01167555.1| hypothetical protein MED92_00295 [Oceanospirillum sp. MED92] gi|89081088|gb|EAR60323.1| hypothetical protein MED92_00295 [Oceanospirillum sp. MED92] Length = 358 Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 111/341 (32%), Gaps = 9/341 (2%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 ++++ + ++ S + A R+P ++ I+P + + Sbjct: 1 MFAVSAVLLVIIMSGRFVKYLSRAA-AGELDPSVLFSIMAYRLPGFLELILPLGLFLGFL 59 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + + L SE+ + A G+S +L++ + +I + + + ++ G + Sbjct: 60 LGYGRLYLESEMTVLEATGMSQKRLVSYSMGPAIFVAVIVGSLSLFVSPYGASETNKIFD 119 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 + + + + + N + + K + ++ +I + Sbjct: 120 DQEGRSELESLVPGRFQKNKNTGRVTYTDEVKDDGTLGLVFMADRNHSTQRLQITVAETG 179 Query: 197 DLAIIYN-DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKK 255 I + + L Y+Y P + + ++ +++ + Sbjct: 180 STLIDQDKGQRFLVLEEGYRYEGEPGQSDYVEVEFKRYGSEVERRNQEIRYDKVEALPT- 238 Query: 256 MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSG 315 + Q + + +P++ + +TL+A +S R + + I Sbjct: 239 ----AMLWGSEEPSHQAQLNWRLSLPVLALVVTLLAVPLSRVNPRQGRFA-RLVPSILIY 293 Query: 316 FMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 TI++ S G P I + + ++ ++L Sbjct: 294 LTYITILSNTTSNVSEGETSP-LTIWIVHFVFAAFALNMIL 333 >gi|23008753|ref|ZP_00050063.1| COG0795: Predicted permeases [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 94/317 (29%), Gaps = 6/317 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ L L L+G ++V + + ++ + +P +I Sbjct: 4 IERYIFRIALGAFLTCLIGLTGTIWVTQALRELDLVTAK-GQTLLVFLFITGLSLPTLIT 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I P + + LN SEL++ A G+ QLL PFV ++ + + T + + Sbjct: 63 VIAPVALFIACVYALNRLNGDSELIVMSAAGMPPRQLLRPFVTLALAISVVTAFLTIQVM 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 S + D++ + + + + + + F ++ Sbjct: 123 PSSFQELRDVLTRVRGDFVANVVKEGQFTALDSGITFHFRERGADGSLQGLFIQDKREAG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGFQKF 240 + R V K + Q +++ + Sbjct: 183 KAVVYLAERGRVTEVDGQTYLVLEKGSIHRQQKDSRDSSIVSYERYAVDLAAFTPPDSET 242 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + RS ++ + R + + + + IA + Sbjct: 243 VYKPRERSTLALL-FPDTREGYYVLQKGRFWAELDERLSAWFYPLVLAFIAFDRLGDPRT 301 Query: 301 SNQPRIIVAYGIFSGFM 317 + Q R + G G + Sbjct: 302 TRQGRGMAVAGAVLGVV 318 >gi|222148153|ref|YP_002549110.1| hypothetical protein Avi_1543 [Agrobacterium vitis S4] gi|221735141|gb|ACM36104.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 399 Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 125/361 (34%), Gaps = 9/361 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + N + + SI A LA +P Sbjct: 6 MKLLESYILRRVAQMFLTALLPVLAIIWTTQVLARINLVTDT-GQSIGSFATLATLILPT 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G S +L P ++ ++ + + T+++ N Sbjct: 65 IIPIVMPFALVIGITQSLTAMNNDSELAVIDAAGASRAVILRPILLFALAISVITLVITN 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + +I + + + + + I + Sbjct: 125 EVQPKVKVAARQMIANAYADLLSTVIEEKTF-RKVEDGLYVQISQRLAGRVLKGLFVADY 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY--GRIPIDKNSTTLNIPIKMDGFQK 239 R+ A + +V + +S ++ + K Sbjct: 184 RDPAYSLIYYAREGAVDETGTALIMHDGEVQRKAPGGTVSIVRFDSYAFDLSDLTETRGK 243 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + + RS ++ ++ H + + + L+ A LI+ +++ + Sbjct: 244 AKMRPSDRSLSFLLNP-DTNDDDYKDHPGEYRAELHKRMTEWLLPFAFALISLAIA-GDA 301 Query: 300 RSNQPRII--VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 RS++ + + + +L + + +S V + + +++ L+L++ Sbjct: 302 RSHREARLHPMVSALTLALVLRWLTFYAANKSESNAAFIVL-MYATPLASAAIATLMLMR 360 Query: 358 K 358 + Sbjct: 361 Q 361 >gi|291614865|ref|YP_003525022.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] gi|291584977|gb|ADE12635.1| permease YjgP/YjgQ family protein [Sideroxydans lithotrophicus ES-1] Length = 377 Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 35/357 (9%), Positives = 110/357 (30%), Gaps = 10/357 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GI + + + T L + +V L + + ++ + Sbjct: 19 GIFYWALVREFASTGLLVSSILLGIVVFTQLIRLLGE-SVSGMLAVDGVLAMLGFTSLNY 77 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + ++ + ++ R SE+V+ GI + + + P + +I + + L+ Sbjct: 78 LPVLLSISLFLSVLLTLSRSYRDSEMVVWFTSGIGLTRWIRPVLGYAIPVTLLIALLSLV 137 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN-HIWEDFTS 181 ++ + ++ D + + + + F+ + ++ Sbjct: 138 LSPWALSKADEFKRRLDSRDDVSAATPGVFRESKQADRVFFLEDVDSQKKRVGNIFVQST 197 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + A + + + Y+ D + Sbjct: 198 QNGKEGTMVAKEGYQETAPNGDRFLVMLNGTRYEGIPGRADFRIVEFERYAMRIEPAELR 257 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E + + + ++ + I +PL + ++L+A +S R+ Sbjct: 258 EDLPHLQAFSTLYLLQN-------PTAWNLSELEWRIGLPLSALILSLLAIPLSYVNPRA 310 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + + + +I++ S+ G + P A L +L + +++ + Sbjct: 311 GR-SLNLIAAMVIYMFYNNMISVTNSWVARGKISPSAGLLGIHLLMFGVMLVLFYHR 366 >gi|262373934|ref|ZP_06067211.1| permease [Acinetobacter junii SH205] gi|262310945|gb|EEY92032.1| permease [Acinetobacter junii SH205] Length = 366 Score = 76.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 127/355 (35%), Gaps = 6/355 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L +++ L +I + + + A R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVTALLTLIIMGGQLIKIFGRAAQ-GRLDAGVLLSIIAYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + + + + ++ Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRNQLAKLLLPMTFVYLLVQSFLMFWG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++SG + L+Q ++ ++ I+ + Sbjct: 121 SSSGIRAYESLMQTQAVRAGFDLVRPKEFISSGPYTIYAGSLSEDRKNLKDIFYYQKAER 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + +I K+A + ND + +V+ + I ++ T + Sbjct: 181 EDKPDVMILAKEATRVEMANDTANVVDLVQGRRYEIYPNQPRYT--QAEFQSYRLRLEND 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + ++ +S S + ++ + I P +++ L+A ++S R + Sbjct: 239 KDIKFESDDVEALSMSKLWQKRDDSVVRSELGWRIFGPFVILVALLLAVALSEVSPRQGR 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ IF L ++ +K+ L A V+L +++ I +K Sbjct: 299 YYRLIP-AIFIFASLIVLMIAIKTRISKEELDIW--AYPVVLLVYAIAAAIFARK 350 >gi|221639315|ref|YP_002525577.1| permease Yjgp/YjgQ family protein [Rhodobacter sphaeroides KD131] gi|221160096|gb|ACM01076.1| Permease YjgP/YjgQ family protein [Rhodobacter sphaeroides KD131] Length = 364 Score = 76.3 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 108/346 (31%), Gaps = 9/346 (2%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 +F L +++ ++ + + + S + +P +I+ ++P I Sbjct: 4 FGFFSLVLVLVYWINRAVGLFDDLIS-DGQSALVFLEFSLLALPNVIRLVLPLSAFAATI 62 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 V L++ SELV+ +A G S ++L P + +++ + ++++N + + Sbjct: 63 YVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSARSA 122 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 + N + ++ ++ + + R Sbjct: 123 EISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTARRALL 182 Query: 197 DLAIIYNDKVKLKK----VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 + + + + T ++ M G + Sbjct: 183 VRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPKRRVLEELPTMTL 242 Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLEFSRSNQPRIIVAYG 311 + + + A + + I P + A +LI A++ L + + Sbjct: 243 LAPTADVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSFSRFGLWWQILFA 302 Query: 312 IFSGFMLYTIITIMKSFGKS-GILLPVAAALIPVILTISLSILILL 356 + ++ TI G + L P+ A + ++ IL+L Sbjct: 303 VLLLIVVQTINVAASGVGVTDEQLWPL--AYAAPVTGFAIGILLLW 346 >gi|332558334|ref|ZP_08412656.1| permease [Rhodobacter sphaeroides WS8N] gi|332276046|gb|EGJ21361.1| permease [Rhodobacter sphaeroides WS8N] Length = 364 Score = 76.3 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 108/346 (31%), Gaps = 9/346 (2%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 +F L +++ ++ + + + S + +P +I+ ++P I Sbjct: 4 FGFFSLVLVLVYWINRAVGLFDDLIS-DGQSALVFLEFSLLALPNVIRLVLPLSAFAATI 62 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 V L++ SELV+ +A G S ++L P + +++ + ++++N + + Sbjct: 63 YVVNRLSQESELVVMQATGFSAFRLARPVIWFGLIVALMMIVLMNLLVPASRATLSARSA 122 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 + N + ++ ++ + + R Sbjct: 123 EISQNATARFLRDGEFLHPADGVTLYIREVTETGELRDLLLVDDRDPARSTAYTARRALL 182 Query: 197 DLAIIYNDKVKLKK----VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 + + + + T ++ M G + Sbjct: 183 VRTDTTPKLLMIDGSAQTLTREGRRLELTRFDDVTYDLGAFMTGSGPKRRVLEELPTMTL 242 Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-ASVSLEFSRSNQPRIIVAYG 311 + + + A + + I P + A +LI A++ L + + Sbjct: 243 LAPTAEVLEETRSTRAAALYEGHSRIGQPFLGFASSLIGFAALLLGSFSRFGLWWQILFA 302 Query: 312 IFSGFMLYTIITIMKSFGKS-GILLPVAAALIPVILTISLSILILL 356 + ++ TI G + L P+ A + ++ IL+L Sbjct: 303 VLLLIVVQTINVAASGVGVTDEQLWPL--AYAAPVTGFAIGILLLW 346 >gi|152998004|ref|YP_001342839.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] gi|150838928|gb|ABR72904.1| permease YjgP/YjgQ family protein [Marinomonas sp. MWYL1] Length = 371 Score = 76.3 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 112/361 (31%), Gaps = 18/361 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L+RY K L +T L ++++ + ++ + + V+ VP Sbjct: 1 MTLRLFRYLAKEVLVSTAGVTLILLLVILSGRFSFYLGRIAD-GKMTFEFLFVILGYHVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +Q I+P + ++ F L +E+ + + GIS +L + + L+G+ + + Sbjct: 60 SFVQMILPLAFFLALLLSFGRLYIENEMSVLFSSGISKVKLAGYTLGIAFLVGLVSASIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A E + Q + I K+ D Sbjct: 120 FWLAPYSEYKAAEASQAQNQLSAFDFLIPGRFEGSGQRTTYIDSFTKEGWMNQIFLSDVV 179 Query: 181 SITIDKKNKIIHRKDADL----AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP--IKM 234 +A+ + + + K Y+ + T + Sbjct: 180 RKKDTNIPIQTFAANAEQIRISSEDNQNYLVFKNGTRYEGKPGTANYRITQFDTYAIRME 239 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + + +++ +I + + + I + L++ + +I S+ Sbjct: 240 SKDESIIDDPYTQNTLSLINSDKLLE----------KVELQWRISLVLIIPILAIIGLSL 289 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S R + + I + ++ ++ + G L + I ++ L+ Sbjct: 290 SQVNPRQGR-FFKMLPAILLMILYIALLIWGRTSLEKGKLPIQLGLWWIHGIFILIAALL 348 Query: 355 L 355 Sbjct: 349 F 349 >gi|289806566|ref|ZP_06537195.1| inner membrane protein YjgQ [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 219 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 1/163 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI 164 +A GE++ + Q G + W + N I Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIER 165 >gi|187931969|ref|YP_001891954.1| hypothetical protein FTM_1332 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712878|gb|ACD31175.1| conserved hypothetical protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 360 Score = 75.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 33/349 (9%), Positives = 98/349 (28%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ K + T L + +V L + + I +P + Sbjct: 2 ILEKYYNKDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + + T Sbjct: 121 NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNILSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F I + ++ +L+A ++ R N+ Sbjct: 239 YNHDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + + + +P I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMANRSVPVWIGFWLPHIFFTIFAV 346 >gi|242240955|ref|YP_002989136.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] gi|242133012|gb|ACS87314.1| permease YjgP/YjgQ family protein [Dickeya dadantii Ech703] Length = 366 Score = 75.9 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 38/351 (10%), Positives = 122/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVD-GEIPTNLVLSLLGLGVPQMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+ LL ++ ++L + ++ + + Sbjct: 61 QLILPLSLFLGLLMTYGKLYAESEITVMHACGLGKSVLLKASLLLAVLTVLLAMVNVLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + + N + Q + +F+G I+ Sbjct: 121 SPWSSRHQDEVLAEARANPGVASMVEGQFQQTQDGNSVLFVGNVSGQDFERIFMAQLHPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ + + + +Y + ++ + Sbjct: 181 ENTRPSVVVADRGHIVARNDGAQIVTLNKGVRYEGTAMLRDFRITDFVNYQAVMGHQDVA 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + A +F++ + + L ++ M ++ +S+ R + Sbjct: 241 IDPTNVEQM-----DMKTLWSSPDIAARAEFHWRLTLVLSVLIMAVMVVPLSVINPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + ++S G L P+ + ++ +++ + Sbjct: 296 V-LSMLPAMLLYLVFFLLQSSLRSNASKGKLDPLMWMWLTNLVYFGIAVAL 345 >gi|296120596|ref|YP_003628374.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] gi|296012936|gb|ADG66175.1| permease YjgP/YjgQ family protein [Planctomyces limnophilus DSM 3776] Length = 373 Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/368 (12%), Positives = 114/368 (30%), Gaps = 22/368 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYS-----ISRGAVLAATR 58 +Y K + + A LV IDL E ++ + + Sbjct: 3 TFDQYLLKNFFYVFFVCFVAAFGLVVTIDLLENLDEFMLNNQSGGALSLLVSIGTYYGYQ 62 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 + + + ++ +VV R+ EL A G+ ++++L ++G +L+ V Sbjct: 63 AIFFLDRGGASLMVIAVMVVLVLFQRSGELHPMLAAGVPMYRVLRALMIGPVLVTAVLVA 122 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + G + + +IS + + + ++ + Sbjct: 123 NQELVVPVIAHAAHGGRGIQTGEGGQVEPIYDYSTKISINGEKVSLADSQLEGAQFVLPA 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKV-----------VEYQYGRIPIDKNSTT 227 + + A D + + R Sbjct: 183 PLIVHDLTIIRGTTAIFRKAAGQRPDGWVIFGAAPQFEELALTPRGQEIVRKVGRSGELF 242 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM 287 + P+ D K S E++ ++ + + TQ + + PL+ + Sbjct: 243 IASPVSCDQLFKRKSSSNYLSTSELLGRIR-NEAYGPLAVQKFVTQVHGRLTQPLINLIA 301 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGF--MLYTIITIMKSFGKSGILLPVAAALIPVI 345 L++ + + R +++ G+ + +L+ ++ + SGI+ AA PV Sbjct: 302 VLLSLPLLV---RRESAGLVMDSGVCAVAQGILFGMMQLSAYLSTSGIIAADLAAWFPVF 358 Query: 346 LTISLSIL 353 + +++ Sbjct: 359 IGGAMAAW 366 >gi|13476526|ref|NP_108096.1| hypothetical protein mll7866 [Mesorhizobium loti MAFF303099] gi|14027287|dbj|BAB54241.1| mll7866 [Mesorhizobium loti MAFF303099] Length = 400 Score = 75.9 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 119/359 (33%), Gaps = 7/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + L L+ + +V+ + + + + S+ +AA +P Sbjct: 1 MKVVERYIMRRAFVVFLAALVWTLAIVWTTQVLAKIDLVTDSGQSSL-TFFEVAALILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF +V +N SELV+ A G S W ++ P ++ ++ +F+ V N Sbjct: 60 IIPIVVPFALVVAVAQTLSVMNSDSELVVVNAAGASRWTIVRPIMLLALAASVFSFAVDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + L+ Q + + + +I + IG + S Sbjct: 120 GIDPYARQKNRALVAQSRADLLSLIIQEGTFRKI-EDGLFLQIGERLPDNRLGGIFVADS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + + V ++ + M F + Sbjct: 179 REEGVNLVYYAKTGSVVERGGEKVLMMNDGVIHRKTLTGDLSVIRFTSYAFDMSAFMAAA 238 Query: 242 EQFASRSFYEIIKKM---SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + + + ++K + + L + LIA +V+ Sbjct: 239 SEVTLLPKDQTTQYLLNPNVNDKLYQQAPQQYRAEIDQRFSEWLYSMVFALIALAVA-GD 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL-PVAAALIPVILTISLSILILL 356 +RS++ + L+ + K+ + I+ +++I ++ Sbjct: 298 ARSHREARVNPLITAITISLFVRWLGFFAASKADEVPQYAYMVYGVPIVASAVAIWFIV 356 >gi|126725340|ref|ZP_01741182.1| Predicted permease [Rhodobacterales bacterium HTCC2150] gi|126704544|gb|EBA03635.1| Predicted permease [Rhodobacterales bacterium HTCC2150] Length = 367 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 110/354 (31%), Gaps = 9/354 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 T +F + + +V + + + + A +P +I ++P Sbjct: 1 MLSQLTVTFGFFAFILVAVYWVNRAIVLFEDLISDGH-TALVFLEFTALALPNVILLVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 V +I V L SE+V+ ++ G S +L+ P ++ + + + ++ + + Sbjct: 60 VAGFVASIYVANRLISESEMVVMQSAGHSAKRLMVPALIFGVGIFVMMSILSHILVPISR 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + + + Q + ++ SN + I + Sbjct: 120 TALAEREGELSQDVTTQFLNAGRFVHPSNDLTIYVREFSETGELRDILLTDDRSANIQTI 179 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVE----YQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 +R V L + + T ++ + ++ Sbjct: 180 YTANRAFLIKTETGPRLVMLSGQTQTLNRTTDRLSFVTFTELTYDLSALIPSSKERVLNM 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EFSRSN 302 +++ + Q + PL+ + + L+ +V L F+R Sbjct: 240 RELFTPALLRGDQADLDRTNSTTAIFKAQAHGRFSKPLLGMILPLLGVAVMLVGGFNRMG 299 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R I+A + + + + + P+ +P++ ++L ++L Sbjct: 300 VSRQILASAVIIILVQMLFNAGENAAISNPTMWPMI--YLPIVFAVALLWMLLF 351 >gi|304392005|ref|ZP_07373947.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] gi|303296234|gb|EFL90592.1| permease YjgP/YjgQ family protein [Ahrensia sp. R2A130] Length = 402 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 113/361 (31%), Gaps = 15/361 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY FK L L G + +++V+ + + + I + VP +I Sbjct: 5 LLERYVFKKALVMVATALAGLVGVIWVVRAVQEVDVIMSK-GQGIMTYLTITTLGVPSLI 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P ++ + LN SE+V+ A G S W L PF+ + L+ I + Sbjct: 64 AAVAPLALMIGMVRTISALNDESEMVVMHASGASRWSLARPFLWLAGLMAIMIYFLSLYG 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWE 177 + + + + + + + K + + E Sbjct: 124 GPHSLTKMRETVNTMRADLISVVVKDGEFQQLGGGLMFHIATRLPGGELKGVFITDTRDE 183 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + I + ++ +V+ V I D + L+ G Sbjct: 184 NEHLTYLADSGTISKIGEDAYLVLRQGQVQRTTVKTNNSSFIDFDSYAFNLSTFSGGTGD 243 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 K + R+ + H +R E F + M I V + Sbjct: 244 GKSRSRGELRTSELFSPDPADEMFKRAPHRFRVEFHTRFTSG---LYAFMVAIVILVCMG 300 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL---PVAAALIPVILTISLSILI 354 +S++ + V I S +L ++ ++ + A +L I S + Sbjct: 301 NPQSHRQGLTVL--ITSTVVLVILLRGAGILVENNLKATPLLWVAVWGIPLLAIGNSFRL 358 Query: 355 L 355 L Sbjct: 359 L 359 >gi|45658408|ref|YP_002494.1| hypothetical protein LIC12569 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601651|gb|AAS71131.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 631 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 21/188 (11%), Positives = 52/188 (27%), Gaps = 1/188 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L L ++ V+ L ++ R + + Sbjct: 131 ILDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGK-GVDPFRLLDYFGYLLANTL 189 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L+ I+ L+ SE+ R+ G+S ++ F+ ++ + + + Sbjct: 190 PMTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALLVGYLNFYL 249 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + Sbjct: 250 SPENTRKMNEFNKWILAYNPLLAITPGQFSGDKTQDLFEKRARTMYTEGMNSNTGELKGV 309 Query: 184 IDKKNKII 191 ++ +I Sbjct: 310 QIREWEIF 317 Score = 59.7 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 ++ + + + I +P+ + I+ + L RS + + + Sbjct: 485 QLMALMQQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGK-GMSFTLAVVF 543 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + +T T+ + + + IL LSI I++++ D Sbjct: 544 LMIYFTFFTLGSTISYNDKIPDWIGPWSANILIALLSINIMIKRTD 589 >gi|300023217|ref|YP_003755828.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299525038|gb|ADJ23507.1| permease YjgP/YjgQ family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 398 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 125/367 (34%), Gaps = 15/367 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I +Y F+ + ++ +V++ N + + + VP Sbjct: 1 MRIFSKYVFRQAAGSFALIMVSLTGIVWIALALRQFN-VVTSQGQDTWMLIKMTSLAVPN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I PF L+ + LN SEL++ A G +W P ++ ++L+ IF V + Sbjct: 60 LMAVIAPFSFLIAALHTLNRLNTDSELIVISASGAKVWTAARPLLLLALLVSIFLAFVSH 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + D + Q + + Q + ++P+ + + + Sbjct: 120 FAQPWSMRQLRDYMVQVRSDLLTQVIQPGRF---TSPETGLMFHIRDRDANGELLGLVMH 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T DK + + + + L V + R + + + +F Sbjct: 177 DTRDKAQSQSYLAEHGTLVKQDGTAYLVMTVGHIIRRTDANGPPQIVAFDKYIVDLDRFE 236 Query: 242 EQFASRSFYEIIKKM-------SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 Q + ++ + S + ++ + V PL +A + + Sbjct: 237 PQDGGPGDLKPRERYFSELINPDPESSSYKNQPGQFRSELHERFVTPLYPLAFAFLIIAF 296 Query: 295 S--LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + +R+++ + +V + + + I + ++ + A +P+ I S+ Sbjct: 297 VGQAQSTRTSRMQSLVVTFVIAATCRLAGLAITNAMVRNPSM-VAVAYGLPIGA-IVYSL 354 Query: 353 LILLQKE 359 ++L + E Sbjct: 355 IVLKRSE 361 >gi|39936124|ref|NP_948400.1| permease YjgP/YjgQ [Rhodopseudomonas palustris CGA009] gi|192291842|ref|YP_001992447.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] gi|39649978|emb|CAE28502.1| possible permease [Rhodopseudomonas palustris CGA009] gi|192285591|gb|ACF01972.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris TIE-1] Length = 388 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 108/361 (29%), Gaps = 13/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + RY F+ L + + ++++ + + +I L VP+ Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGID-LMTSQGQTIITFLGLTGLAVPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S +L PF ++++ +++ Sbjct: 60 LVLVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVIIIGA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA G + + + + + +Q + I ++ P + F Sbjct: 120 YIAPDGLRRIARWDSEITADVLANVLQPGRF---AQLEQGLTIRVRERQPGGLLVGVFID 176 Query: 182 ITIDKKNKIIHRKDADLAIIYND--KVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MD 235 ++ D + + + L+ ++ + + Sbjct: 177 DARAPNERVSIIADHGTVVKNDKGSFLVLEDGHLERFQTGKQEPALVAFSRYAFDMSKFS 236 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + R +E++ L+ + A + Sbjct: 237 RARDVAYGIRERYLWELLWPAENDPLLARLPTEFRSEMHDRLLAPIYPFFFAAVAFAFLG 296 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L + +A + F++ + P A L ++L ++ + Sbjct: 297 LARTTRQSRNFSMAGAVLVAFVVRLAGFALSVIANK---TPYVAGLQYLLLFVATGTCLW 353 Query: 356 L 356 L Sbjct: 354 L 354 >gi|85374865|ref|YP_458927.1| permease [Erythrobacter litoralis HTCC2594] gi|84787948|gb|ABC64130.1| predicted permease [Erythrobacter litoralis HTCC2594] Length = 437 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 115/358 (32%), Gaps = 7/358 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + + + A L+ + + + + + I + +P Sbjct: 32 IDRYIFRLTIVPMMAVFVLAASLLLLDKMLRLFDFVAVEGG-PIGVVFKMLGALIPEYAS 90 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IP L+ + F L +SEL + RA+G+ +LL + + +L V ++ I Sbjct: 91 LAIPLGLLLGILFAFRKLATSSELDVLRAVGMGYGRLLRVPYIITAILVAVNVALVFYIQ 150 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L + + + + +++ ++ S Sbjct: 151 PISRYYYEQLEYELRSGALGASIKVGEFTTLADRMALRIEESEDNGRNLKGIFARVSNDK 210 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + I R+ + LA + + ++ + + ++ L+ + + Sbjct: 211 GQVLSISAREGSFLATTDSSDTIILRLTDGTIVQDTGNQTPRVLSFTRHDLPIDLPAIEQ 270 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQF---YFLIVIPLMLVAMTLIAASVSLE---F 298 + + + S + + +E + L+ V M + ++L Sbjct: 271 FRQRGDAEREYILPELLSIGWSDTESEAKRDASQASFNFRLVEVVMMWLLPLLALSLAIP 330 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + + V I + + + G + P+ A P +L +L + + Sbjct: 331 PKRSTSALGVFVSIVMVVSYHKVNQYGEDVAALGRVDPIVALWGPFVLFAALILWMFW 388 >gi|145641036|ref|ZP_01796617.1| predicted permease [Haemophilus influenzae R3021] gi|145274197|gb|EDK14062.1| predicted permease [Haemophilus influenzae 22.4-21] Length = 336 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 110/317 (34%), Gaps = 10/317 (3%) Query: 40 MGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW 99 N L +P + Q ++P + ++ F L SE+ + RA G+ Sbjct: 6 AAANGNVPADLVFSLLGLGMPTMAQLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQR 65 Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ 159 L+ ++ S+L ++ + +++++ K N ++ +N Sbjct: 66 ILVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNN 125 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYG 217 +FI K +++ + K +I + +L + N LK + Sbjct: 126 VVLFIDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGT 185 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + D T + G+Q + + + + + S + + ++ Sbjct: 186 SVLPDFRITHFDEYQAYLGYQSAENTNDEVAELTLSQLIDLDSSSA-------KAELHWR 238 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 I + L + M LIA +S R + + + + + + + KS G +G L Sbjct: 239 ITLILAVPLMALIAVPLSRVNPRQGRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAE 297 Query: 338 AAALIPVILTISLSILI 354 + I L++++ Sbjct: 298 LLIPLVNIGFFLLAVVL 314 >gi|319955107|ref|YP_004166374.1| permease yjgp/yjgq family protein [Cellulophaga algicola DSM 14237] gi|319423767|gb|ADV50876.1| permease YjgP/YjgQ family protein [Cellulophaga algicola DSM 14237] Length = 493 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 31/259 (11%), Positives = 79/259 (30%), Gaps = 1/259 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +L M L+FV + + +P Sbjct: 1 MRILDRYLLSRFLYNFFSSFAILM-LIFVFQTIWLFIDDLAGRGLDVMIILKFLFYIMPN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++++++P L+ +I+ F ++ E +A GIS+ + + P ++ +LG+ N Sbjct: 60 LMEKVLPLTVLLASILTFGSIAENYEFAAMKASGISLQRSMRPLIIFVCILGVVVFYFAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + E+ +L + + + ++ + K + + Sbjct: 120 SVIPASEQKIYNLRKNIGQVKPSTAIVEGAFSDLEGTNMNMKVDRKYGDNDRFLENVIIH 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D K ++ ++ + K+V + F Sbjct: 180 RKSDNSINNTVIKAKTGELVSSEGSDILKLVLRDGHYYEDITKKKSTENRKYPFAKSSFE 239 Query: 242 EQFASRSFYEIIKKMSFSN 260 ++ ++ + Sbjct: 240 IYTINQDISKLDVNLEEDR 258 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 1/125 (0%) Query: 230 IPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 P + + + + I+ + + L + + Sbjct: 338 YPEYQKSQILNAAKNTTTNILASIRSKKDELDKRYKIYNMHIVSLHKKFALGLSCIVLFF 397 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 + A + R + + I Y I +++ K G + P+ A ++ + Sbjct: 398 VGAPLGA-IIRKGGLGVPMVVAILLFLTYYFIGVFSENYAKDGNMSPIIGAWTSTLIMLP 456 Query: 350 LSILI 354 L + + Sbjct: 457 LGVFL 461 >gi|227821476|ref|YP_002825446.1| putative permease protein [Sinorhizobium fredii NGR234] gi|227340475|gb|ACP24693.1| putative permease protein [Sinorhizobium fredii NGR234] Length = 390 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 116/355 (32%), Gaps = 12/355 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY F+ L LL + +V+ N + + SI LA +P Sbjct: 1 MKLIERYIFRRATIMFLATLLPLLGIVWTTQALSNVNLVTD-SGQSIFAFLKLATLILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+PF L+ +N SEL + A G S ++ P + ++ L + + ++ N Sbjct: 60 VVPIILPFALLIGVTQTLSVMNTDSELTVLNAAGSSRMSVIRPVIYLAVGLSVLSFVIDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + + +I++ + + I+ Sbjct: 120 FVEPYSRVAVRKMIATAHADLLSSVVQENAFRRITDGLYVQVAARRSGGVLHGIFVAD-- 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI----PIDKNSTTLNIPIKMDGF 237 + + ++++ + +K ++ I +S ++ Sbjct: 178 -SRNPNFELVYYAREGAVDEERSALVMKDGEVHRKLPDGGVSVIKFDSYAFDLTDMTRTA 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS-- 295 + + + R + +I ++ S + + + + LIA VS Sbjct: 237 GEATIRAKDRDLFYLIDP-DPNDPSYKRSPLAFTAELHRRLSEWTYPLLFGLIALVVSSD 295 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 R + ++ + + ++ + + + I L+P++ Sbjct: 296 ARSHREARVHPTIS-AVGAALVIRWMTFYAGNSAEDSIWFVPLMYLVPLMTGALA 349 >gi|297565137|ref|YP_003684109.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] gi|296849586|gb|ADH62601.1| permease YjgP/YjgQ family protein [Meiothermus silvanus DSM 9946] Length = 337 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 91/354 (25%), Gaps = 20/354 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L +L + + DL + + N +S L R+P + Sbjct: 2 LQRYLLRETLGLYTVGILIFVG-LLTTDLLSSLSGVLLRQNTPLSDVLQLVVYRLPYTLG 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V R SEL + A GI LL P ++ +++ + + Sbjct: 61 IALPLGLVFSLLVTLSRWIRQSELKAAYAGGIPPRSLLWPALLLGVVVSGVALWNEGWVK 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + Sbjct: 121 PEAQARFDAVQYRIYYGSQLSGVLSDKVYAPEGLGVYYAQRIYPDREGARLEGVRVIEPG 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 AD +L+ + L P + Q S Sbjct: 181 GA------IWSADRGRWLEKSWQLQNAYRVDPDGKVTQVSLQPLPFPARFVP-QSSSSGA 233 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + ++ + + L + + +A V L S Sbjct: 234 LTLRLPDL--------HAAARVDPSVRFTLARTYANALGALVLAWLAIVVGLSLRESAWA 285 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 I + + F Y + T F K + A +P ++ L+ ++ Sbjct: 286 FISI---VGLIFGYYVLWTASAQFAKFNVWGAY-GAWLPNLVYGLLAAWGTVRL 335 >gi|300703337|ref|YP_003744939.1| permease [Ralstonia solanacearum CFBP2957] gi|299071000|emb|CBJ42309.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CFBP2957] Length = 372 Score = 75.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 104/344 (30%), Gaps = 13/344 (3%) Query: 15 KTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVV 74 LL M+ VI + M S + +L + ++ + Sbjct: 16 GAVFLVLLTFMLTTLVIRILG----MAANGEASPNDVLLLIGLATLGYLAILLCATLFIS 71 Query: 75 NIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDL 134 ++V + SE+V+ G+S+ + P + S+ + L+ + Sbjct: 72 VLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVALLALFGWPWANQQSALF 131 Query: 135 IQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSITIDKKNKIIHR 193 +++ +++ ++ +F G + + + Sbjct: 132 RDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEADKIGVALAKT 191 Query: 194 KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEII 253 + + + V L K Y+ +D + + + Sbjct: 192 GEFKTSPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQVDAN------LP 245 Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 K + + + + I +PL+ + LIA ++ R + ++ + Sbjct: 246 TKSRPTTELLSNPTPENLGELVWRIGLPLLALNFVLIAVPLAYVNPRLGRYTPMIF-AVL 304 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ + +++ G + + A P+ L + ++L + Sbjct: 305 IYLTYSNLLNLSQAWVAQGKMNAMLA-WWPIHLLAFVCAVLLFR 347 >gi|254453241|ref|ZP_05066678.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] gi|198267647|gb|EDY91917.1| permease YjgP/YjgQ family protein [Octadecabacter antarcticus 238] Length = 372 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/359 (10%), Positives = 108/359 (30%), Gaps = 16/359 (4%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 L +F L +++ ++ + +++ S L + +P +I+ ++P Sbjct: 1 MLGQLLVFFGFFSLILVLIYWINRAVRLFDRLI-ADGQSAWVFLELTSLSLPSLIRIVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 V + V ++ SEL + +A G S ++L P +V +++ + ++ N + Sbjct: 60 LSAFVAAVYVTNRMSSDSELTVVQATGYSPFRLARPVIVFGVIVAVLMSILTNILVPLST 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + I + + ++ ++ I+ ++ + Sbjct: 120 ERLITRQAEIAQTMTARLLTPGEFLTPTDDVTFYIRELPPGGEMLDIFISESTSPTQRTT 179 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R V + + + + N+ M+ Sbjct: 180 YTASRAYLVRTENGPQLVMVDGLTQTLNLETSRLLTTRFEDFVYNVSALMNDDPVRKTSV 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFSRSNQ 303 S +++ + + + + + + I + L+ S + + Sbjct: 240 NGLSTMALLRPSAETIADTNQTGDQLKLRGHDRIAQAALGFVAGLVGFSALVVGGFSRFG 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI----LILLQK 358 + + + +L + S + AAL P + + +LL Sbjct: 300 LWRNIIFAVGLVILLKLLEGTGTSIATTN------AALWPFVYLAGIGGVVISAMLLHI 352 >gi|226940338|ref|YP_002795412.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] gi|226715265|gb|ACO74403.1| permease YjgP/YjgQ [Laribacter hongkongensis HLHK9] Length = 363 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 105/356 (29%), Gaps = 10/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R + + ++ V + ++ ++ L A Sbjct: 2 IFYRSVIRELTAVAFAVFSVLLAIMVVTQVVKLFDKAAS-GALPADAIVALIAFSTLGYF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + IVV + R E+ + G+S + + P + ++ L + V + Sbjct: 61 GTLLSITLFISVIVVLTRIWRDHEMAVWLTSGLSPNRWIRPVLAFAVPLTLLIATVSLFL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFTSI 182 + G + + + + + + + + Sbjct: 121 GPWAARKGSEYTDILRQQDEISAVAPGVFKESRDGSKVYFVENYSGEAGSATNLFVRSIE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + L Y+ D K Sbjct: 181 NGKTSLVFAREGIVRTEPNGERYLYLTDGRRYEGEAGAADWKVVEFRKY-------KVKI 233 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 R+ + K S+ + + A + + + +P+ + + L+A +S RS Sbjct: 234 NQNIRTTVDTRTKSVPSSMLWLANTPDARAELAWRVSLPIASLILALLAIPLSYYNPRSG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 Q + IF + Y ++ +++S+ G L + + + + +L+++++ Sbjct: 294 QT-FNLLIAIFVYQLYYNLMGVVQSWISKGELSVWSMVWLHLTMLGLFVLLMVMRR 348 >gi|15602061|ref|NP_245133.1| hypothetical protein PM0196 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720419|gb|AAK02280.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 368 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 108/310 (34%), Gaps = 16/310 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K LK+ L L +++ F L + L +P + Sbjct: 2 ILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAAS-GKVPADLVMSLLGLGMPTMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ F L SE+ + RA G+ L+ ++ S+ + + Sbjct: 61 QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++++ K N ++ +N + +FI + K + ++ T Sbjct: 121 TPWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLFIDSIKDNTIHDVYVFQTRER 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLK-----KVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + K ++ + +L + N LK +V + + Sbjct: 181 GNLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKN 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ F++++K H A+ + + + + L + M LIA +S Sbjct: 241 NDEQETEELGFWDLMK----------THTPAAKAELNWRLSLILAVPLMALIAVPLSRVN 290 Query: 299 SRSNQPRIIV 308 R + ++ Sbjct: 291 PRQGRFAKVL 300 >gi|84500989|ref|ZP_00999224.1| Predicted permease [Oceanicola batsensis HTCC2597] gi|84391056|gb|EAQ03474.1| Predicted permease [Oceanicola batsensis HTCC2597] Length = 385 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/362 (10%), Positives = 101/362 (27%), Gaps = 13/362 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 RY ++ +F L + + ++ + + + + A +P +I+ Sbjct: 4 FDRYLLSQFMVLFGFFSLVLVSIYWINQAVRLFDALIG-DGQTAWVFLEFTALTLPNVIR 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P T + V L+ SELV+ ++ G S W+L P + +++G+ ++ + + Sbjct: 63 IVLPMATFAAVVYVTNRLSSESELVVMQSTGFSPWRLARPVLWFGVIVGLIMSVMSHFLV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + ++ ++ Sbjct: 123 PVSISRLQERQDDLRQDLTARLLTEGSFLHPVAGITFYIRQIDADGTLRDVFFSDRRDAR 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVK--------LKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + R ++ + + T +I Sbjct: 183 SPQTFTAARAYLIEGGGDDEGGAKLVMLDGLAQTLRAEDQRLFTTYFEDFTYDIGRLFGD 242 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--V 294 + + + + L+ +A LI S + Sbjct: 243 RGLPHVHIRHLPTLRLFAHPEQVATLTGSSPGQIAEEAHGRFAQALLCLAAALIGFSTLL 302 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + FSR + IV + + + L P+ + + I + ++ Sbjct: 303 TGGFSRFGVWQQIVVAIVLVMIVKSIEGVASDPVRRDPSLWPLI--YVAPLSGIGIGCVM 360 Query: 355 LL 356 L Sbjct: 361 LW 362 >gi|114569777|ref|YP_756457.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] gi|114340239|gb|ABI65519.1| permease YjgP/YjgQ family protein [Maricaulis maris MCS10] Length = 373 Score = 75.1 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 118/358 (32%), Gaps = 13/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RYFF L + + L + + + + + A +P + + Sbjct: 6 RYFFNQLLWPFMTAIAAFAGLALLTQSLSNVDLVSGYSE-TALTFIKVTALALPHLTALL 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P V + L SELVI+ A G+S + LL+P + + + I + V + Sbjct: 65 VPIALFVAVLSSLNRLTGDSELVIASAAGVSRFGLLSPIMRLGVYVLIANLAVNLLLQPV 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + + + I ++ + IL + D Sbjct: 125 AYREMRRSLHTLRSDVAASLVTPGAFSQLGQGVTIYARERGRDGRMQDILIHDSRGTDGA 184 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S ++ ++ D ++ + ++ + + ++ + Sbjct: 185 STYSAREGVVVRSGDRSAMVLIDGNLQQID---SAGELYYANFDRYEFDLGEFVGPADAM 241 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFS 299 + + R +E++ + + + RA + ++ + PL +A LIAA+ Sbjct: 242 FFKESDRYLHELLWPSA-AEVARTGGPERAWAEAHYRLSAPLYNLAFALIAAACFLAGDH 300 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + +G L + M+S + A + + + ++ ++ Sbjct: 301 SRMGYGRRVMIAVGAGLTLRLVGFAMQS-ASADDAAMNVAQYLVPVFGMVGAVAVIYW 357 >gi|224586302|ref|YP_002640101.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470830|gb|ACN48660.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 359 Score = 75.1 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 119/344 (34%), Gaps = 7/344 (2%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + LK+ L L +++ F L I + + + L VP + Q I+P Sbjct: 2 RETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 + ++ L SE+ + A G+S L+ +V ++ GI + + K Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKH 120 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 +++ + K N + Q +N +FI + + ++ + + + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSV 180 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 + L + + + ++ + ++ + + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG-----HQAVALD 235 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 N RA + ++ I + + M L+ +S+ R + + + Sbjct: 236 PNDTDQMDMRTLWNTDNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGRV-LSMLP 294 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + I T +KS G G L PV ++ ++L+I + Sbjct: 295 AMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAVNLIYLALAIGL 338 >gi|154148833|ref|YP_001406853.1| permease YjgP/YjgQ [Campylobacter hominis ATCC BAA-381] gi|153804842|gb|ABS51849.1| permease YjgP/YjgQ [Campylobacter hominis ATCC BAA-381] Length = 353 Score = 75.1 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 109/356 (30%), Gaps = 5/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I +Y Y K + + ID+ + N + A Sbjct: 1 MKIFQKYIGWTYFKYFVILFVALEFFYVGIDVLTNLKDFPQSANLG----LLYIAITAVA 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +P + I+ FN+ R +E + A+G+ L+ P + ++ + + + N Sbjct: 57 AITYTLPLSLVFALIIAKFNMIRNNEFISFFALGVPKNSLIIPPFLIALFITFGYISLNN 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I K ++ N + + + Sbjct: 117 TIFVKAVKFQKNITNFASLNENADDLLLKYDGNFIYMSKLNPKEKTAKDVIFLETNGTNL 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I+ K ++ L N + + + G + + + + Sbjct: 177 ISKAISKKGVYNDKKWLFSDVNTTFLPQNLRLGEQGLTYKFEKNAQKLNNFDPNTIKNVY 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + YE IK + I + + + +I PL M LI SR Sbjct: 237 DSSQTYTIYEAIKSIKTFKNQGI-NVQTLKANLFVMIFFPLFAPFMVLILYYYLPVISRF 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ ++ I+ ++ F +G+++P ++P+ + + + L+ Sbjct: 296 FNLALLSFAFFIITLCVWGILFVLVRFSLNGVIIPEIGIILPIFVMFCYACYLFLK 351 >gi|24213806|ref|NP_711287.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] gi|24194638|gb|AAN48305.1| hypothetical protein LA_1106 [Leptospira interrogans serovar Lai str. 56601] Length = 631 Score = 75.1 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 21/188 (11%), Positives = 52/188 (27%), Gaps = 1/188 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L L ++ V+ L ++ R + + Sbjct: 131 ILDRYILREIFSPFLVSLAFFTMVYMVLALQKMIGLFVGK-GVDPFRLLDYFGYLLANTL 189 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L+ I+ L+ SE+ R+ G+S ++ F+ ++ + + + Sbjct: 190 PMTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALLVGYLNFYL 249 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + Sbjct: 250 SPENTRKMNEFNKWILAYNPLLAITPGQFSGDKTQDLFEKRARTMYTEGMNSNTGELKGV 309 Query: 184 IDKKNKII 191 ++ +I Sbjct: 310 QIREWEIF 317 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 ++ + + + I +P+ + I+ + L RS + + + Sbjct: 485 QLMALMQQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGK-GMSFTLAVVF 543 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + +T T+ + + + IL LSI I++++ D Sbjct: 544 LMIYFTFFTLGSTISYNDKIPDWIGPWSANILIALLSINIMIKRTD 589 >gi|296272453|ref|YP_003655084.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] gi|296096627|gb|ADG92577.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] Length = 356 Score = 75.1 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 122/357 (34%), Gaps = 5/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y + +++ + L+ I ID + +++ N + + Sbjct: 1 MRIITKYLLRKFIRNFVIVLISLQIFFVGIDFLQNFDEVPNSANLQLLYILYNSFF---- 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P + I+ + +T+E+V S ++G+ Q+ P V SI+L + + Sbjct: 57 TLTLTLPLSLVFGWIITIVIMVKTNEMVASFSLGVGNRQIFMPVVNVSIILIVLLIGFQM 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +++ K + ++ + + D Sbjct: 117 TPLAYSYEYKEKILKNTYFTSSKSDIFVKYNDYFVYFKKLYPLQKYAEDIHIYKVVDDDI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K + + + K K + + K Sbjct: 177 EEGIVAKKAYFQNNRWYVLDARITKKPKVIDWNNSKIEIHHEKFLYTLEGFKPKILDSVY 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E +S S + I ++ N + + Y+ IV PL V + ++ S + SR Sbjct: 237 ESTSSFSILDAITALTLLNDQ-EVNTSKIRASLYYEIVAPLYFVPLIILIFSYTSFNSRF 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I + +++ + ++ F G++ P + L+P+ L ++ +++ ++ Sbjct: 296 FNIGKFTSFSIAATLVIWGVFFMLHKFSSGGVINPEISILLPIFLWYIITYILIKKQ 352 >gi|300690719|ref|YP_003751714.1| permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] gi|299077779|emb|CBJ50417.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum PSI07] Length = 372 Score = 75.1 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/344 (11%), Positives = 104/344 (30%), Gaps = 13/344 (3%) Query: 15 KTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVV 74 LL M+ VI + M S + +L + ++ + Sbjct: 16 GAVFLVLLTFMLTTLVIRILG----MAANGEASPNDVLLLIGLATLGYLAILLCATLFIS 71 Query: 75 NIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDL 134 ++V + SE+V+ GIS+ + P + S+ + L+ + Sbjct: 72 VLLVLTRWYKDSEMVVWFTAGISLTDFIRPVLRFSLPFVVLVALLALFGWPWANQQSALF 131 Query: 135 IQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSITIDKKNKIIHR 193 +++ +++ ++ +F G + + + Sbjct: 132 RDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAAQDKIGVALAKT 191 Query: 194 KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEII 253 + + + V L K Y+ +D + + + Sbjct: 192 GEFKTSPNGDRYVLLDKGRRYEGTPGQLDYRIVEFDRYGVKVASKPPQADAN------LP 245 Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 K + + + + I +PL+ + LIA ++ R + ++ + Sbjct: 246 TKSRPTTELLANPTPENMGELVWRIGLPLLALNFVLIAIPLAYVNPRLGRYTPMIF-AVL 304 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ + +++ G + + A P+ L + ++L + Sbjct: 305 IYLTYSNLLNLSQAWVAQGKMNAMLA-WWPIHLAAFVCAMLLFR 347 >gi|326561253|gb|EGE11612.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 437 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 104/368 (28%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY TT L ++++ L E ++ L P + Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAE-GGLNVGVLFRLIGYNFPYFL 115 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++VF L E+ + A GIS ++ + ++L V Sbjct: 116 ELILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVA 175 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + ++ Q+ ++ + + + Sbjct: 176 KPWGMERATNIWQEQSVAQVFDLIRPQEFISSDDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVV-EYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D I ++ + Q + + Sbjct: 236 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 243 QFASRSFYEIIKKMSFS------------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 S E + S + A + + + +P +++ L+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELLSIIQGHSKRDNPQEAYAELGYRLSMPWLILLAILL 355 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A +S R + +V I ++ +K G L PV L +++ + + Sbjct: 356 ATPLSYVRPRQGRWYKLVP-AILIYVAGVLVVISLKDTITKGKLSPVI-YLAALLMMMVV 413 Query: 351 SILILLQK 358 ++ + + Sbjct: 414 AMYLNYHQ 421 >gi|89054305|ref|YP_509756.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] gi|88863854|gb|ABD54731.1| permease YjgP/YjgQ [Jannaschia sp. CCS1] Length = 371 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 106/327 (32%), Gaps = 7/327 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + + +F L + + +V + +++ +I +A +P I+Q Sbjct: 5 DRYILRQLVALFGFFSLVLVSVYWVNQAARLFDRLI-ADGQNIGVFLEFSALTLPWIVQL 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 I+P V + +F + SELV+ + G+S +LL P V LL I +++N +A Sbjct: 64 ILPVSAFVATLYIFNRMISESELVVLQTAGLSALRLLRPVFVFGCLLAILLAVLVNILAP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + + +D+ + ++ ++I L E + T Sbjct: 124 TARGQFTQRQAEVQDDLTGRFLRAGEFIH-PAAGLTVYIREISELGEFRDLFLQDASTPG 182 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDGFQKFS 241 + + ++ + V ++ + + + G Sbjct: 183 VEVTYTANTALLVRSDTGPRLVMFDGVAQTLDLDTGRLSTISFSDFTYSVGTLGGTGARQ 242 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI-AASVSLEFSR 300 +++ + + + + L ++ + LI AAS+ L Sbjct: 243 IDVRELPTPLLLRANQQIAGALNLPLSHLVFEGHDRLAQSLFVLFVPLIAAASLMLGSFS 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKS 327 + + + + ++ Sbjct: 303 RFGVWKQILIAVALVLPMQIVRNASEA 329 >gi|319407069|emb|CBI80706.1| putative permease, YjgP/YjgQ family [Bartonella sp. 1-1C] Length = 382 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 109/361 (30%), Gaps = 11/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K LLGA+ + + + + N + ++ +P Sbjct: 1 MRILELYILKRIFILFSAVLLGAVGISWTVQILARIN-FLTTNGQTFLTIVYFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IIPF +V + +N+ SEL + A GIS + P ++ ++L + + N Sbjct: 60 VTSLIIPFALVVAITTILSTMNQDSELAVISASGISKNIVWKPILLLAVLASFTSFSITN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA ++ + + Q I IG + Sbjct: 120 FIAPHARLNMRQILASSHSDLISLFIREGSF-QELTKNLYIEIGERNANGTIGRLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K A + + L + + + + +F Sbjct: 179 RDPQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTF--SLSEFI 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNY------RAETQFYFLIVIPLMLVAMTLIAASVS 295 + + Y + +S+ N ++ + + + L + LI +++ Sbjct: 237 PNKKTPNIYPKDRPLSYLFNPNPNDSHYQRKPLQYRAELHRRFTECLYPIVFALIVIAIA 296 Query: 296 L-EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S I ++Y + ++ +IP+ +++ + ++ Sbjct: 297 GDAHSYRQARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYIIPIGISLLIFFML 356 Query: 355 L 355 L Sbjct: 357 L 357 >gi|326568200|gb|EGE18282.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC8] Length = 442 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 107/368 (29%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY TT L ++++ L E ++ L P + Sbjct: 62 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAE-GGLNVGVLFRLIGYNFPYFL 120 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++VF L E+ + A GIS ++ + ++L V Sbjct: 121 ELILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVA 180 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + ++ Q+ ++ + + + Sbjct: 181 KPWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTA 240 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVV-EYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D I ++ + Q + + Sbjct: 241 EPSDIQSRQSHKRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 300 Query: 243 QFASRSFYEIIKKMSFS------------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 S E + S + A + + + +P +++ L+ Sbjct: 301 MTLSVKPPEGTSHIRIEGVSTTELLSIIQGHSKRDNPQEAYAELGYRLSMPWLILLAILL 360 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A +S R + +V + + +I++ + K G L PV L +++ + + Sbjct: 361 ATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVI-YLAALLMMMVV 418 Query: 351 SILILLQK 358 ++ + + Sbjct: 419 AMYLNYHQ 426 >gi|17547135|ref|NP_520537.1| hypothetical protein RSc2416 [Ralstonia solanacearum GMI1000] gi|17429437|emb|CAD16123.1| putative permease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 372 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/350 (10%), Positives = 104/350 (29%), Gaps = 10/350 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + T L + + + I S + +L + ++ Sbjct: 7 LRRELSFTAGAVFLVLLTFMLTTLVIRILGMAAN-GEASPNDVLLLIGLAALGYLAILLC 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++V + SE+V+ G+S+ + P + S+ + L+ Sbjct: 66 ATLFISVLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVGLLALFGWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI-GAKKILPENHIWEDFTSITIDKK 187 + +++ +++ ++ +FI G + + Sbjct: 126 QQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEQDKIG 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + + + V L K Y+ +D D + + Sbjct: 186 VALAKTGEFKAGPNGDRYVVLDKGRRYEGTPGQLDYRIVEF------DRYGVKVANKPPQ 239 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + K + + + + I +PL+ + LIA ++ R + + Sbjct: 240 ADANLPTKSRPTTELLSNPTPENMGELVWRIGLPLLALNFVLIAIPLAYVNPRLGRYTPM 299 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + ++ + +++ G + + A P+ L + +L + Sbjct: 300 IF-AVLIYLTYSNLLNLSQAWVAQGKMSAMLA-WWPIHLAAFVCAGLLFR 347 >gi|145637643|ref|ZP_01793298.1| predicted permease [Haemophilus influenzae PittHH] gi|145269166|gb|EDK09114.1| predicted permease [Haemophilus influenzae PittHH] Length = 195 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 6/196 (3%) Query: 170 LPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND--KVKLKKVVEYQYGRIPIDKN--- 224 + ++ +D T D+++ +I K A+ A D K L++V + I Sbjct: 1 MTDDTKLDDIYIYTFDQQHNLIKLKHANQASYSEDEAKWTLRQVNHSTITKDEIITTNHL 60 Query: 225 STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML 284 S T + D S + S S + +SF ++ R E F+ I P+ + Sbjct: 61 SETWETSLTPDKLGAVSLRPTSLSISGLYHYISFLRETGQ-DVSRFELTFWRKIFQPVSV 119 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 M L+A S RS + GI GF+ Y + I+ + + ALIP Sbjct: 120 GVMMLLALSFIFGSLRSVTAGARIVTGICVGFLFYVVNEILGQTSVVYGIPAIFGALIPS 179 Query: 345 ILTISLSILILLQKED 360 +L I + +L +K D Sbjct: 180 LLFIVMIWWLLSRKRD 195 >gi|186476977|ref|YP_001858447.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] gi|184193436|gb|ACC71401.1| permease YjgP/YjgQ family protein [Burkholderia phymatum STM815] Length = 370 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 100/354 (28%), Gaps = 11/354 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAASGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ A G+S+ + + P V + + I + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS-NPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + + + + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y D Q Sbjct: 181 NGKVNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVS 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGTPTLDLF--------RDPTRQNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + I + + ++ +++S+ + G + + IL + + I Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVGLHILVALIVVFIFW 345 >gi|170692022|ref|ZP_02883186.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] gi|170143306|gb|EDT11470.1| permease YjgP/YjgQ family protein [Burkholderia graminis C4D1M] Length = 365 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 104/356 (29%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAAQGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ + + P + + + I + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTRFIKPIGMFATPIIILICFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI-SNPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + S+ + ++ Sbjct: 121 WPWSNQQSKMIRARFQQRDEVSLLAPGQFRESASSHRVFFIEKMSPDQGHVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y+ D Q Sbjct: 181 NGKVNVVVSKNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIESQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGT--------PTLTLLRNPTQVNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA-ALIPVILTISLSILILLQ 357 + I + + ++ +++S+ + G + ++ VI+ ++ + L+ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQSWIEQGKMSFALGLVILHVIVAAIVAFIFWLR 347 >gi|189500558|ref|YP_001960028.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] gi|189495999|gb|ACE04547.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides BS1] Length = 441 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL+RY K ++ L+ + + ++ + + ++ + A L + +V Sbjct: 1 MKILYRYILKEHIGPFLFSFITILFILTLQFVTRFFDRFAGK-DLGFIVIAELISLQVAW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P LV ++ F NL +SE+ + RA G+S+++L+ P +V + LL N Sbjct: 60 MVVLALPMAVLVATLIAFGNLANSSEMTVMRAGGVSLYRLVFPVLVAAALLTGILERFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + L++ + Sbjct: 120 IVLPEANYQAKVLLRDITRAKPTFGLTENAF 150 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 8/96 (8%), Positives = 34/96 (35%), Gaps = 1/96 (1%) Query: 262 SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI 321 + + +F+ + + L+ A + + R I + + + + Sbjct: 337 QSQGMYNKYMVEFHKKYALSFACIVFVLVGAPLGVLAKR-GGFGIGAGLSLLFFILYWAL 395 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + G+L P + + + + + + +++ Sbjct: 396 LIMGEKLSDRGLLDPGISMWLANAVMLLIGFIAMIR 431 >gi|326565140|gb|EGE15331.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 103P14B1] gi|326572841|gb|EGE22826.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis CO72] gi|326573713|gb|EGE23671.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis O35E] Length = 437 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 107/368 (29%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY TT L ++++ L E ++ L P + Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAE-GGLNVGVLFRLIGYNFPYFL 115 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++VF L E+ + A GIS ++ + ++L V Sbjct: 116 ELILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVA 175 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + ++ Q+ ++ + + + Sbjct: 176 KPWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVV-EYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D I ++ + Q + + Sbjct: 236 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 243 QFASRSFYEIIKKMSFS------------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 S E + S + A + + + +P +++ L+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELLSIIQGHSKRDNPQEAYAELGYRLSMPWLILLAILL 355 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A +S R + +V + + +I++ + K G L PV L +++ + + Sbjct: 356 ATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVI-YLAALLMMMVV 413 Query: 351 SILILLQK 358 ++ + + Sbjct: 414 AMYLNYHQ 421 >gi|288940756|ref|YP_003442996.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] gi|288896128|gb|ADC61964.1| permease YjgP/YjgQ family protein [Allochromatium vinosum DSM 180] Length = 380 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 106/347 (30%), Gaps = 8/347 (2%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + + L +L ++++ + ++ L + + ++ I ++P Sbjct: 17 REAAQVFLAIVLVLVLILASLMFLRTLEEV-NLGGLGVDVVFRYLSLQIQRDISSLLPPA 75 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 + +V R SEL+ +A G+ +L F++ ++ + T V + Sbjct: 76 FFLAILVTLARFARDSELIAMQACGVGPPRLYRTFLLLAVPVAFVTGWVALDLKPHAAAG 135 Query: 131 GIDLI-QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK 189 + QQ + + + ++IG + Sbjct: 136 IQQIRLQQKEQAAQIAGLQAGRFYVEEQGKVVVYIGEIDQHKLLGDVFVLDRRGEKTRLV 195 Query: 190 IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSF 249 + + D + V Q R S I + ++ ++ Sbjct: 196 VSDSGRHRIEESTGDHL----VTLTQGHRFDGQAGSGAYLIGDFERYEIRLADAGSAPHA 251 Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 + + + + + + PL ++ + ++A + R + Sbjct: 252 FNKRATIPTPDLMHSDELADRVELEH-RLAAPLSILTLAVLAIPLVDPSPRQRTTG-RML 309 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + F + + + +S+ +G+ +L + + L+LL Sbjct: 310 LALLAYFSFFNLQRLAESWMAAGVTPAWLGSLWYQLAILVFVHLMLL 356 >gi|326559485|gb|EGE09908.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 7169] gi|326566095|gb|EGE16252.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC1] gi|326567798|gb|EGE17902.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 12P80B1] gi|326572163|gb|EGE22159.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis BC7] Length = 437 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 107/368 (29%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY TT L ++++ L E ++ L P + Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAE-GGLNVGVLFRLIGYNFPYFL 115 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++VF L E+ + A GIS ++ + ++L V Sbjct: 116 ELILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVA 175 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + ++ Q+ ++ + + + Sbjct: 176 KPWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVV-EYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D I ++ + Q + + Sbjct: 236 EPSDIQSRQSHKRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 243 QFASRSFYEIIKKMSFS------------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 S E + S + A + + + +P +++ L+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELLSIIQGHSKRDNPQEAYAELGYRLSMPWLILLAILL 355 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A +S R + +V + + +I++ + K G L PV L +++ + + Sbjct: 356 ATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVI-YLAALLMMMVV 413 Query: 351 SILILLQK 358 ++ + + Sbjct: 414 AMYLNYHQ 421 >gi|87121690|ref|ZP_01077577.1| hypothetical protein MED121_19119 [Marinomonas sp. MED121] gi|86162941|gb|EAQ64219.1| hypothetical protein MED121_19119 [Marinomonas sp. MED121] Length = 368 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/352 (9%), Positives = 104/352 (29%), Gaps = 17/352 (4%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 K L +T+ ++++ + E + ++ +P +Q IIP Sbjct: 1 MAKEVLVSTMAVSFILLLIIASGRFVSYLGRAAE-GKMTFEFLFIILGFHIPSFLQIIIP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++ + L +E+ I A GIS +L + +++ + + +A + E Sbjct: 60 LSFFLALLLAYGRLYIENEMSILFACGISKVKLTFYTLGIALIATLVNASISLWLAPTSE 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAK---KILPENHIWEDFTSITID 185 + + + + Sbjct: 120 YQSQLAKAEQDQLTVFDFLQPGRFQGKGFNTTYVAEITPEEGWMKDVFISNTSKVEGKNI 179 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM--DGFQKFSEQ 243 + + + + K ++ +D T + + + + E Sbjct: 180 PTQTLASHAEQIQLEGGDTYLVFKNGTRFEGVPGQLDYRITQFDTYAVLLDEKGELSIED 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +++ EI + + ++ + + I + +M+ + +I S+S R + Sbjct: 240 PSTKPSSEIWRSDDLNEQAE----------WQWRISLVIMIPILAIIGTSLSQVNPRQGR 289 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + ++ ++ + G + IL ++ + Sbjct: 290 -FFKMLPAILLMILYLGLLIWGRTSLEKGRIPSSFGLWWVHILFGLIAAFLF 340 >gi|54113843|gb|AAV29555.1| NT02FT0414 [synthetic construct] Length = 360 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/349 (9%), Positives = 96/349 (27%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y+ + T L + +V L + + I +P + Sbjct: 2 ILEKYYNIDIVNTFTSITLFIISIVSANLLIRLFQE-AYSQGLGIDSIVKFVILTIPENV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + ++ F +E+ ++ A GI+ Q++ + + L I T++ + + Sbjct: 61 SLVAPIAIFLAIVICFGKYFANNEMFVTIAGGITWMQIVKNTLKPVVALTIITLITVMYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ + + + T Sbjct: 121 NPLSKQTLDIYRASLSAKALLSSITDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + K + + + + + S F Sbjct: 181 GEYKVMTAPTAKIVSDKTAAYIDFMNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + N ++ + + +F I + ++ +L+A ++ R N+ Sbjct: 239 YNHDRVDRLYMHTLIENFNDKNNGTAYKAEFLGRINNAISVIVSSLLALALCRLRPRQNK 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + + + + + + + +P I ++ Sbjct: 299 YAK-LLPSVVVLAIYLCTNMFINTLMANSSVPVWIGFWLPHIFFTIFAV 346 >gi|316933708|ref|YP_004108690.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] gi|315601422|gb|ADU43957.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris DX-1] Length = 388 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/363 (11%), Positives = 104/363 (28%), Gaps = 13/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + RY F+ L + + ++++ + + +I L VP+ Sbjct: 1 MGSIDRYIFRTTLVSFAVVMGSLTGVIWITQALRGID-LMTSQGQTIITFLGLTGLAVPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S +L PF ++++ ++ Sbjct: 60 LVLVIAPIALMIAVAHTLNRLAVDSEIIVMNAAGLSPIRLFRPFFYATMVVAALVTVIGA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA G + + + + Q+ + ++ D Sbjct: 120 YIAPDGLRRIARWDSEITADVLANVLQPGRFAQLEPGLTIRVRERQPGGILVGVFIDDAR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++ + I + V +E M F + Sbjct: 180 DPNERISIIADHGTVLKNEKGSFLVLEDGHLERFQAGKQEPTLVAFSRYAFDMSKFSRAR 239 Query: 242 EQFASRSFYEIIK--KMSFSNKSNIFHNYRAETQFYFLIVIPLML-----VAMTLIAASV 294 + + + + ++ + ++ P+ VA + Sbjct: 240 DVSYGIRERYLWELLFPPADDPLLARLPTEFRSEMHDRLLAPIYPFFFATVAFAFLGLPR 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + SR+ V + + I L + A + I++ + + Sbjct: 300 TTRQSRNFSMIGAVLVAFVVRLAGFALSVIANKTPYVAGLQYLLLA-----VAIAICLWL 354 Query: 355 LLQ 357 + + Sbjct: 355 IKR 357 >gi|157736891|ref|YP_001489574.1| hypothetical protein Abu_0640 [Arcobacter butzleri RM4018] gi|157698745|gb|ABV66905.1| conserved hypothetical membrane protein [Arcobacter butzleri RM4018] Length = 355 Score = 74.7 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 112/353 (31%), Gaps = 5/353 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K YL + L+ + ID + + N + + Sbjct: 1 MSILSKYILKKYLINFIIVLISLELFFVGIDYLQNFKNIPASANLQLLYILYNSFFT--- 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P + IV + +E V A+G + + P V+ SI L I + + Sbjct: 58 -LTLALPLSIVFGWIVTLVLFIKNNEFVAFNALGATRKNIFMPVVIVSISLLITLIFLQM 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + K + Q+ + + K + + Sbjct: 117 TPLAYSYEQKRKILNDEYFSNTKSDIFLKYNEYYVYFQKLLPLEKKAENIHIYKVKGDNL 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + K + D + K + + + K Sbjct: 177 VETIIGEKAYFQNDKWYVVDVKVINKPENIDINNSKLDVRYEKFLHTLEGFKPKILDNVY 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E + S + + + + + + T Y ++IP ++ + ++ S + SR Sbjct: 237 ESKSDFSIMDAVSALILLKDQGM-NTQKIRTILYNQLIIPFFVIPILILVYSFASLNSRF 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V++ IF +++ ++ SG ++P + L+ + + + SI Sbjct: 296 FNMAKFVSFSIFGTLIVWGFFFLVFRLTSSGTVIPEISMLLTMFIWVIFSIYF 348 >gi|325282729|ref|YP_004255270.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314538|gb|ADY25653.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 347 Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 97/354 (27%), Gaps = 11/354 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY LK + L ++L D+ + N + + +P ++ Sbjct: 4 LTRYILLDVLKWYVMGFLLFVVLQMT-DVLSLTAGAFLDYNATPQQALSTLLYNLPTLLN 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + + ++ F + SE+ A G+ L+ P + +L+G T +A Sbjct: 63 RSLVLAVPFAVLLSFGRMQGDSEIKAMYAAGVRPLSLVWPLALPFLLVGALTFWNSGWVA 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 D + + + A P+ + Sbjct: 123 PWANARWYDAWYDIYGMTPEPPTREMYAYSEGETLFYAGRVASGEEPQQALLSGVMVQRG 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + D+ L + G P + S ++ D + Sbjct: 183 GE----VITADSGTWNTATQTWTLTGAWVTRPGETP--QPSAEPLTFVQKDTLAPPRPEA 236 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S E+ +++ T + L + A + L Sbjct: 237 DQLSRAELRAELADPTLQGA----ERRTLEHQLAGRTADSFTAVIFALAAGLLGLLMPGR 292 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 A + + Y T+ G L P A +P ++ I L+ + + Sbjct: 293 AWAFAAVLLVVVVYYVPWTLGPQLAAGGALTPALVAWLPNLIFIVLAAALAWRL 346 >gi|315636068|ref|ZP_07891325.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315479637|gb|EFU70313.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 355 Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 112/353 (31%), Gaps = 5/353 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K YL + L+ + ID + + N + + Sbjct: 1 MSILSKYILKKYLINFIIVLISLELFFVGIDYLQNFKNIPASANLQLLYILYNSFFT--- 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P + IV + +E V A+G + + P V+ SI L I + + Sbjct: 58 -LTLALPLSIVFGWIVTLVLFIKNNEFVAFNALGATRKNIFMPVVIVSISLLITLIFLQM 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + K + Q+ + + K + + Sbjct: 117 TPLAYSYEQKRKILNDEYFSNTKSDIFLKYNEYYVYFQKLLPLEKKAENIHIYKVKGDNL 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + K + D + K + + + K Sbjct: 177 VETIIGEKAYFQNDKWYVVDVKVINKPENIDINNSKLDVRYEKFLHTLEGFKPKILDNVY 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E + S + + + + + + T Y ++IP ++ + ++ S + SR Sbjct: 237 ESKSDFSIMDAVSALILLKDQGM-NTQKIRTILYNQLIIPFFVIPILILVYSFASLNSRF 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 V++ IF +++ ++ SG ++P + L+ + + + SI Sbjct: 296 FNMAKFVSFSIFGTLIVWGFFFLVFRLTSSGTIIPEISMLLTMFIWMVFSIYF 348 >gi|225849792|ref|YP_002730026.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] gi|225646703|gb|ACO04889.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] Length = 356 Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 119/361 (32%), Gaps = 14/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +K L L + + +L E+ + + I ++ ++P Sbjct: 1 MRILDRYLYKKLTVYLLVVLPSFSFVAVLAELIEVLRKAKQ---LDIYYLSLYILYQLPE 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P ++ I++ +L + E+ GIS+ L + + L ++ + Sbjct: 58 KVYYILPISAVIAFILLAKDLIESKEIYPILLNGISLKSLATKLFIFPLFLSFLQIINLE 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + +K + K+ +++ + + + ++ + + +D Sbjct: 118 LIMPTAKKEVEKVYSILKNRPPEEEKYLFAYNRWITLDSKSYMYFRFLDFNKREGKDLIF 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ----YGRIPIDKNSTTLNIPIKMDGF 237 I D+ + R + + I + ++ + + + + + Sbjct: 178 IQFDENYNPVLRIEGNRFKIKGRSILIQNGKIIDLSDIFSFNYRRFKTFDFPVAVDIKNL 237 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 +K + S ++ + + K Y Y + + ++++ Sbjct: 238 KKLVKVKKPVSILQLYRSAVIAEKFGYPAGYYWSKF-YSKLATVFSALILSIVVFPFLWS 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + S + + + S +SG + P L ++ + + + L + Sbjct: 297 RKKDK-----LFIAFASIIVYWYGTAFIASMAESGAV-PYITVLFVDLVYLMVGLFFLSK 350 Query: 358 K 358 Sbjct: 351 L 351 >gi|319784423|ref|YP_004143899.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170311|gb|ADV13849.1| permease YjgP/YjgQ family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 400 Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 115/359 (32%), Gaps = 7/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + + L+ + +V+ + + + + S +AA +P Sbjct: 1 MKVVERYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTD-SGQSALTFFEVAALILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF +V +N SEL + A G S W ++ P ++ ++ +F+ V N Sbjct: 60 IIPIVVPFALVVAVAQTLSVMNSDSELAVVNAAGASRWTIVRPIMLLALAAAVFSFAVDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + L+ + + + +I + + +G + S Sbjct: 120 GIDPYARQKNRALVASSRADLLSLIIQEGTFRKI-DDGLFLQVGERLPNNRLGGIFVADS 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + + V ++ + M F + Sbjct: 179 REEGVNLVYYAKTGSIIERGGEKVLMMNDGVIHRKTLTGDLSVIRFTSYAFDMSAFMAAA 238 Query: 242 EQFASRSFYEIIKKM---SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + S ++K Y + + LIA +V+ Sbjct: 239 SAVTLLPKDQTTQYLLNPSANDKYYQQSPYEYRAEVNQRFSEWTYSMVFALIALAVA-GD 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL-PVAAALIPVILTISLSILILL 356 +RS++ + L+ + K+ + I+ +++I ++ Sbjct: 298 ARSHREARVNPLITAITISLFVRWLGFFAASKADEIPQYAYMVYGVPIVASAVAIWFIV 356 >gi|241663806|ref|YP_002982166.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] gi|240865833|gb|ACS63494.1| permease YjgP/YjgQ family protein [Ralstonia pickettii 12D] Length = 372 Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 103/344 (29%), Gaps = 13/344 (3%) Query: 15 KTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVV 74 LL M+ VI + M + + +L + ++ + Sbjct: 16 GAVFLVLLTFMLTTLVIRILG----MAANGEANPNDVLLLIGLATLGYLAILLCATLFIS 71 Query: 75 NIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDL 134 ++V + SE+V+ GIS+ + P + S+ + L+ + Sbjct: 72 VLLVLTRWYKDSEMVVWFTSGISLTDFIRPVLRFSLPFILLVALLALFGWPWANQQSALF 131 Query: 135 IQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSITIDKKNKIIHR 193 +++ +++ ++ +F G + + + Sbjct: 132 RDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDNGMKHARNVFVANAEQDKIGVAMAKT 191 Query: 194 KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEII 253 + + + L K Y+ +D D + ++ + Sbjct: 192 GEFKTMPNGDRFIVLDKGRRYEGTPGKLDYRIVEF------DKYGVKVANKPPQADANLP 245 Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 K + + + I +PL+ + LIA ++ R + ++ + Sbjct: 246 TKSRSTKDLLANPTPENLGELVWRIGLPLLALNFVLIAIPLAYVNPRLGRYTPMIF-AVL 304 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ + +++ G + A P+ L + ++L + Sbjct: 305 IYLTYSNLLNLSQAWVSQGKMNVFMA-WWPIHLAAFICAVLLFR 347 >gi|270265132|ref|ZP_06193395.1| permease YjgP/YjgQ family protein [Serratia odorifera 4Rx13] gi|270041066|gb|EFA14167.1| permease YjgP/YjgQ family protein [Serratia odorifera 4Rx13] Length = 364 Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 124/353 (35%), Gaps = 11/353 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F +L ++ + N + L A VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFCQNLVKVLGDAVD-GNVPTNLVLSLLALGVPKMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ +V +++ + + Sbjct: 61 QLILPLSLFLGLLMTLGRLYTDSEITVMHACGLGKRTLIIAAMVLALITSAVAAVNVFWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +I + K N + + +FIG K N ++ Sbjct: 121 GPVASRYQDVVISEAKANPSIAGLAEGQFKPSQDGNAVLFIGNVKGSTFNDVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ +LK + T L ++ F + Sbjct: 181 GNQRPSVVVA-------ERGKINQLKDGSQVVTLDKGTRFEGTALLRDFRITDFNDYKAV 233 Query: 244 FASRSFYEIIKKMSFSNKS--NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 R+ + + + A +F++ + + L + M L+ +S+ R Sbjct: 234 VGHRAVAIDGNQAEQMSMQALWQSDDPDARAEFHWRLTLVLSVAIMALLVVPLSVVNPRQ 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + I + + + T ++S G G L P+ + ++++ + Sbjct: 294 GRV-LSMLPAILLYLIFFLLQTSLRSNGGKGKLDPMIWLWVVNAAYFAIALAL 345 >gi|326574663|gb|EGE24599.1| putative ABC transporter permease protiein YjgP/YjgQ [Moraxella catarrhalis 101P30B1] Length = 437 Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 107/368 (29%), Gaps = 16/368 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY TT L ++++ L E ++ L P + Sbjct: 57 ILRRYMTTQVASTTALVLGFLVVILLGGRLIRYFGMAAE-GGLNVGVLFRLIGYNFPYFL 115 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + ++VF L E+ + A GIS ++ + ++L V Sbjct: 116 ELILPLSFFIGLMLVFGRLYTDHEMTVMNASGISRGRVARLLMPLVVVLMCIEGWVSMVA 175 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 G + ++ Q+ ++ + + + Sbjct: 176 KPWGMERATNIWQEQSVAQVFDLIRPQEFISSGDYHLYVGEMGANREFLKDVIIIQMHTA 235 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVV-EYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D I ++ + Q + + Sbjct: 236 EPSDIQSRQSHQRDSIIFAKSATHVETGNGQIQLDLQQGRRYEVDPTSRQYSQIGFERYR 295 Query: 243 QFASRSFYEIIKKMSFS------------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 S E + S + A + + + +P +++ L+ Sbjct: 296 MTLSVKPPEGTSHIRIEGVSTTELLSIIQGHSKRDNPQEAYAELGYRLSMPWLILLAILL 355 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A +S R + +V + + +I++ + K G L PV L +++ + + Sbjct: 356 ATPLSYVRPRQGRWYKLVPAILIYVAGVLVVISLKDTIAK-GKLSPVI-YLAALLMMMVV 413 Query: 351 SILILLQK 358 ++ + + Sbjct: 414 AMYLNYHQ 421 >gi|209519258|ref|ZP_03268060.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] gi|209500338|gb|EEA00392.1| permease YjgP/YjgQ family protein [Burkholderia sp. H160] Length = 365 Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 102/356 (28%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAASGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ + + P + + + I + + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLARFIKPIGIFATPIIILIMFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN-PQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESPTTHRVFFIEKMSPDQGHVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y D Q Sbjct: 181 GGKVNVVVSKNGHIETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGLP--------TMTLLRNPTNENLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA-ALIPVILTISLSILILLQ 357 + I + + ++ +++++ + G + ++ VI+ ++ + L+ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQAWIEQGKMSFGVGLVILHVIVLGIVAFIFWLR 347 >gi|332876989|ref|ZP_08444742.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685097|gb|EGJ57941.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 491 Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 1/154 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY +L L L +++ + +++ + +P Sbjct: 1 MKILDRYILTQFLTNFLGALSILVLIFVFHTIFTYIDELAGR-GLELWIIGKFLIYFIPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I+P ++ +I+ F E +A GIS+ +++ P +V LL I T + N Sbjct: 60 LIPIIMPLAVVISSIMTFGAFAENYEFAAMKASGISLMRVMLPLIVLMALLSIGTFFLAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 + + L + I Sbjct: 120 NVIPVAYREVYTLRSNIAKVKPAMAISEGVFSNI 153 Score = 52.8 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + + + +AA + F R + + + Y I MK+ ++ + Sbjct: 378 DKFALTVACFVLFFVAAPLGA-FIRKGGIGLPLVVAMIVFLAYYFIGMFMKNIAENNTIN 436 Query: 336 PVAAALIPVILTISLSILI 354 P A IP ++ + + + Sbjct: 437 PALAPWIPALILLPFGVYL 455 >gi|193212373|ref|YP_001998326.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] gi|193085850|gb|ACF11126.1| permease YjgP/YjgQ family protein [Chlorobaculum parvum NCIB 8327] Length = 440 Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY K +L T + + M + + + + ++ A + + Sbjct: 1 MKIFDRYILKTHLGTFFFAFVTIMSVFILSFVTKFLERLIGK-GLDFGIIAEVVLLQSAW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P LV ++ F L +SEL + RA GISI++L+ P ++ ++ L + N Sbjct: 60 MVGFAVPMAVLVTTVMAFGVLTNSSELTVMRAGGISIYRLVAPVLLAALALSLMMERYNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + L D + Sbjct: 120 VLMPEANYRANALFADITRLKPALGLDKNAF 150 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 9/99 (9%), Positives = 35/99 (35%), Gaps = 1/99 (1%) Query: 260 NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLY 319 + + + +++ + + ++ A + + +R A +F + + Sbjct: 334 MQQHREDYRKYMIEYHKKYSLAFACLVFAMVGAPLGV-MARRGGFGAGAALSLFFFVLYW 392 Query: 320 TIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ + G+L P + +P + + +L + Sbjct: 393 VLMIGGEKIADQGLLSPAVSVWLPNAILTCAGLFMLYRL 431 >gi|167645643|ref|YP_001683306.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348073|gb|ABZ70808.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 409 Score = 74.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 119/360 (33%), Gaps = 7/360 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + + L ++ +++ + + LAA VP Sbjct: 14 FRLIDAYLLRLLVWPIVGCLGV-TVIALLLERVLRLLDVLSQSSARFGYVTSLAANLVPH 72 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P V +V L+ SE+ A G S+ ++ PFV + L +F+++V Sbjct: 73 YLGLALPVAFFVALFIVITKLSDGSEIDALLASGQSLTRIAAPFVSVGVFLMVFSLIVFG 132 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + + G K + ++ ++ Sbjct: 133 YMQPYSRYAYRAVMHEAINAGWNGKLNGGSFIDEPKLLMTADDADAAGQQLKRVFIRRLD 192 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKK-----VVEYQYGRIPIDKNSTTLNIPIKMDG 236 + +++ D L + V+ + + + T +P+ Sbjct: 193 VNGNEEVITAATADLRADHDAKSVTMLLRNGQRIGVDARGAYRTLMFDQLTTQVPLAGAA 252 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + R + +++ + Y + L L + L+A + L Sbjct: 253 ALLRARGGDERELTLGELARQANTPNSVVPRATLLAELYGRLARALFLPFLPLLAFPLGL 312 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R N+ ++ G+ + + +S +SG +P+AA P ++ LS+ + + Sbjct: 313 AAKRGNRTPGLIIAGVLL-LAFQHSLQLGQSLAESGKAMPLAAIGTPWLIFTGLSLWMFI 371 >gi|91977434|ref|YP_570093.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] gi|91683890|gb|ABE40192.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB5] Length = 388 Score = 74.0 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/364 (10%), Positives = 111/364 (30%), Gaps = 21/364 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + Y F+ L + + ++++ + + +I L VP++I Sbjct: 4 IDSYIFRTTLTSFAVVMASLTGVIWITQALRGID-LMTSQGQTIVTFLGLTGLAVPVLIL 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I P ++ L SE+++ A G+S +L PFV +I + + L+ IA Sbjct: 63 VIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPIRLFRPFVYATIAVAVLVTLIGAYIA 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWED 178 G + + + + + I ++ + ++ + Sbjct: 123 PDGLRRIARWDSEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRRDPN 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 I ++ D ++ + ++ + + + + + + ++ + Sbjct: 183 DRVSIIADHGTVVKNSDGSFLVLEDGHLERFQAGKQEPALVAFSRYAFDMSKFSRARDVT 242 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML-----VAMTLIAAS 293 + K + + + + ++ P+ V + Sbjct: 243 YGIREHYLWELIWPDPK----DPLLAQVPTQFRAEMHDRLLAPIYPFFFAAVTFAFLGMP 298 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + SR+ VA + + + + + A + I +S+ Sbjct: 299 RTTRQSRNFSMVGAVACAFVVRLAGFALSVVANHTPYIAGIQYLLLA-----VAIGVSLW 353 Query: 354 ILLQ 357 ++ + Sbjct: 354 LIRR 357 >gi|157147734|ref|YP_001455052.1| hypothetical protein CKO_03538 [Citrobacter koseri ATCC BAA-895] gi|157084939|gb|ABV14617.1| hypothetical protein CKO_03538 [Citrobacter koseri ATCC BAA-895] Length = 366 Score = 74.0 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 121/351 (34%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++ G+ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSRAVLVKAAMVLALFTGVVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q +N +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSAVLFIESVDGSDFKDVFLAQIRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ L + + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + RA + ++ I + + M L+ +S+ R + Sbjct: 236 HQAVALDPNDTDQMDMRTLWQTDTNRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + T +KS G G L PV ++ ++L++ + Sbjct: 296 V-LSMLPAMLLYLLFFLLQTSLKSNGGKGKLDPVIWMWAVNLIYLALAVGL 345 >gi|260466946|ref|ZP_05813128.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] gi|259029243|gb|EEW30537.1| permease YjgP/YjgQ family protein [Mesorhizobium opportunistum WSM2075] Length = 400 Score = 74.0 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 116/354 (32%), Gaps = 7/354 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + + L+ + +V+ + + + + S +A+ +P II + Sbjct: 6 RYIMRRAFVVFMAALVWTLAIVWTTQVLAKIDLVTD-SGQSALTFFEVASLILPSIIPIV 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +PF +V +N SEL + A G S W ++ P ++ ++ +F+ V N I Sbjct: 65 VPFALVVAVAQTLSVMNSDSELAVVNASGASRWTIVRPIMLLALAASVFSFAVDNGIDPY 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + L+ + + + + +I + IG + + S Sbjct: 125 ARQKNRALVAESRSDLLSLIIQEGTFRKI-EDGLFLQIGERLPDNKLGGIFVADSREEGV 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + + + + + V ++ + M F + Q Sbjct: 184 NLVYYAKTGSIIERGGEKVLMMNDGVIHRKTLTGDLSVIRFTSYAFDMSAFMSAANQVTL 243 Query: 247 RSFYEIIKKM---SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + S ++K+ + + + LIA +V+ +RS++ Sbjct: 244 LPKDQTTQYLLNPSANDKNYQQNPQEYRAEIDQRFSEWTYSMVFALIALAVA-GDARSHR 302 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV-AAALIPVILTISLSILILL 356 + L+ + K+ + I+ +++I ++ Sbjct: 303 EARVNPLITAIAISLFVRWLGFFAASKADEIPQYGYMVYGVPIVASAVAIWFIV 356 >gi|313674336|ref|YP_004052332.1| permease yjgp/yjgq family protein [Marivirga tractuosa DSM 4126] gi|312941034|gb|ADR20224.1| permease YjgP/YjgQ family protein [Marivirga tractuosa DSM 4126] Length = 549 Score = 74.0 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 64/231 (27%), Gaps = 5/231 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I + + ++ L + ++ + + + + S A L A Sbjct: 1 MKKI-DKLILRSFIGPFLITFFVVVFILLTQYMLKYFDDFVGK-DLGFSVFAELIAYFSI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + P L+ +++ F NL EL ++ GIS+ ++L P V + L Sbjct: 59 NMTPIAFPLAVLLSSLMTFGNLGEHFELTAIKSAGISLVRVLRPLFVFVVCLSAVVYYSN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N I L+ K + + Sbjct: 119 NFIVPKANLEAYSLLYDIKQKKPSIDIKEGAFYGGIPGYSIKANKKYDDDKSLGDLIIYN 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDK---VKLKKVVEYQYGRIPIDKNSTTL 228 +II A + I DK ++L Y + + Sbjct: 179 HSDRKGNTEIILADSALMYTILGDKYLVMELFDGKSYTEEEANKPQEPSNY 229 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 46/164 (28%), Gaps = 11/164 (6%) Query: 202 YNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNK 261 + K + +D+ S +D R+ ++ K F+ Sbjct: 357 PDQLSKYDDQRTLKNTPKKLDRESIVEYDQNLIDRADSAFNSITRRTPSNLVDKPRFAKN 416 Query: 262 SNIFHNYRAETQFYF----------LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYG 311 N R E + + + + + M LI A + + V Sbjct: 417 RLKGENRRIENRKFEINVYSIEANSKLSQAVACIVMFLIGAPLGAIIKK-GGLGFPVIVS 475 Query: 312 IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I + Y I T G++G + A + + + L Sbjct: 476 ILFFIVSYVINTTGIKLGRAGDISNFWAVWASNFVLLPFGLFFL 519 >gi|260596296|ref|YP_003208867.1| lipopolysaccharide ABC transporter permease LptF [Cronobacter turicensis z3032] gi|260215473|emb|CBA27590.1| Lipopolysaccharide export system permease protein lptF [Cronobacter turicensis z3032] Length = 370 Score = 74.0 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 118/339 (34%), Gaps = 7/339 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLALLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++L GI + + Sbjct: 61 QLILPLSLFLALLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLALLTGIIAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q ++ +FI + ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATDGNAVLFIESVDGSKFKDVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ +L+ + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGELSQRKDGSQVVTLNQGTRFEGTAMLRDFRITDFKDYQAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + + A +F++ + + ++ M L+ +S+ R + Sbjct: 236 HQAVALDPDDAEQMDMQTLWQADSKSARAEFHWRLTLVFAVIVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + + + + + T ++S G G L P+ Sbjct: 296 V-LSMLPAMLLYLIFFLLQTSLRSNGAKGKLDPLIWMWA 333 >gi|329850877|ref|ZP_08265722.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] gi|328841192|gb|EGF90763.1| hypothetical protein ABI_37960 [Asticcacaulis biprosthecum C19] Length = 385 Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 38/355 (10%), Positives = 106/355 (29%), Gaps = 10/355 (2%) Query: 13 YLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITL 72 + + + + + E S + +PL+ I P Sbjct: 1 MIVPVAGAVAALTAIALISQSLTQFELVVER-GQSAWTFIRVTLLSMPLLSGLIFPIALF 59 Query: 73 VVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGI 132 V +V L E + A G+S+ Q+ +P + + +F++ + + Sbjct: 60 VGTLVALTRLQGEHEFTAAFASGMSLRQVSSPIIRIGVYFLLFSLASNLFLQPWSARSMR 119 Query: 133 DLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIH 192 + + + K++ + + + I+ + + Sbjct: 120 EELFKVKNDLVSTLVKEGEFSTSPSGLTIYVQRIDQNSLLRQIYIRIPATEGGADRTYVA 179 Query: 193 RKDADLAIIYNDKVKLKKV---VEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSF 249 R+ + + L+ I + T++ I + + + R Sbjct: 180 REGKITQVGTESLLILRNGSTQWVSGGELDHITFDETSIPISDYFASDDSLNFKESERYL 239 Query: 250 YEIIKKMSFSNKSNIFHNYRA----ETQFYFLIVIPLMLVAMTLIAASVSLEFSR-SNQP 304 +E+ + + + + + PL ++ L+A L Sbjct: 240 HELFFPNLALPGDGGNYERKNVGKLMAEGHARLASPLYNLSFVLLAIMAVLGGGFSRGGY 299 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 +A + +M++ G +L + L+P ++ I + + +L +++ Sbjct: 300 TQRIAIAAGVAVTARLLGVVMQTIGAEAAILNILQYLVP-LIPIIMCVRLLNKRD 353 >gi|124006213|ref|ZP_01691048.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] gi|123988137|gb|EAY27795.1| putative permease, YjgP/YjgQ family [Microscilla marina ATCC 23134] Length = 491 Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 73/273 (26%), Gaps = 6/273 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I + + + + L + + V L + ++ S A L Sbjct: 1 MKKI-DKLVLQSFFGPFILTLSVLVFIFLVQQLLQYLDEFMGK-GLSYLVFAELVFYFSL 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II ++P TL+ +++ F NL EL ++ GIS+ ++L P + + + + Sbjct: 59 HIIPMVLPLATLLASLITFGNLGEHHELTAMKSSGISLIRVLTPLFMVVVCFAVVSFWFN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N I L+ + + + Sbjct: 119 NSIVPKANLDAYSLLYDIRQTKPALDIKEGAFYGGIPNYSIKVNHKFPDGRTLKDVIIYD 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKV----KLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 ++I + K V ++ + S Sbjct: 179 HSGRRGNKQVILADSGQMYTFDKGNFLAFELFKGVRYHELPTREGARPSEEFLKSKFKHS 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR 269 FS + + + S N+ + Sbjct: 239 KMIFSLESFNMDTTDKNLFKSNKIMRNVTELNK 271 Score = 39.7 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 17/230 (7%), Positives = 53/230 (23%), Gaps = 9/230 (3%) Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 S K + N D ++ +I ++ + + E I Sbjct: 233 SKFKHSKMIFSLESFNMDTTDKNLFKSNKIMRNVTELNKDIDSLTRKRKDLEARVLKYIS 292 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 R ++ + + ++ + I + Sbjct: 293 PYYLYHMRDRTIDTLLNEGTKVVSLLKTWKKELDTTRYKKSQAVIYKDAFNRASNVKTVV 352 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + + + + + + + M LI A + + Sbjct: 353 VNRTKQWQQTIK--------DRNIFAIEKHRKYTNAVACIIMFLIGAPLGAIIKK-GGLG 403 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + I + Y + + + K ++ + + + L Sbjct: 404 MPIIISIIFFIIFYLLSMTGEKWAKDSMVPVAYGMWGANFILFWVGLFFL 453 >gi|15888448|ref|NP_354129.1| hypothetical protein Atu1108 [Agrobacterium tumefaciens str. C58] gi|15156140|gb|AAK86914.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 389 Score = 74.0 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 116/356 (32%), Gaps = 4/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ I + + N + + S+ LA +P Sbjct: 1 MKLLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDT-GQSMGSFMALATMILPT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I ++PF ++ +F +N SEL I A G + P ++ + +L +F+ + N Sbjct: 60 LIPVVLPFALVIGITQIFTTMNNDSELAIIDAAGAPRSVMYRPVLILAAVLSLFSFTITN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I ++ + + + I + + + + D Sbjct: 120 FIEPPARNSARQMVAAAYADLLSSVIEEKTFRTIQDGLYVQIAQRQGRILKGLFVADRRD 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D + + + + S ++ + Sbjct: 180 PNFDLIYYAKEGMIDESGTSLTMRDGEVQQKTPDGKVSIVKFLSYAFDLSTMSEKQDSEP 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL--EFS 299 + + +N S ++ + + + + LI+ +++ Sbjct: 240 SLSPGDASLGFLLSPDENNASYKRSPETFRSELHKRLSDWMFAFSFALISLAIAADSRSH 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R + +VA + + + + + +S +P+ A +P + + + +++ Sbjct: 300 REARLHPMVAALVTAFMLRWLGFYVTNQVKQSAAFIPLVYA-VPGLSGAAAAFVLM 354 >gi|156935580|ref|YP_001439496.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156935598|ref|YP_001439514.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] gi|156533834|gb|ABU78660.1| hypothetical protein ESA_03444 [Cronobacter sakazakii ATCC BAA-894] gi|156533852|gb|ABU78678.1| hypothetical protein ESA_03463 [Cronobacter sakazakii ATCC BAA-894] Length = 370 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 120/339 (35%), Gaps = 7/339 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V ++L GI + + Sbjct: 61 QLILPLSLFLALLMTLGRLYTESEITVMHACGLSKAVLVKAAMVLALLTGIVAAVNVMWA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +++ + K N + Q ++ +FI + N ++ Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATDGNAVLFIESVNGSKFNDVFLAQLRPK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + ++ +L+ + + ++ + ++ + Sbjct: 181 GNARPSVVVADSGELSQRKDGSQVVTLNQGTRFEGTAMLRDFRITDFKDYKAIIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + ++ A +F++ + + ++ M L+ +S+ R + Sbjct: 236 HQAVALDPDDAEQMDMKTLWQANSKSARAEFHWRLTLVFAVIVMALMVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + + + + + T ++S G G L P+ Sbjct: 296 V-LSMLPAMLLYLIFFLLQTSLRSNGAKGKLDPLIWMWA 333 >gi|292493019|ref|YP_003528458.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] gi|291581614|gb|ADE16071.1| permease YjgP/YjgQ family protein [Nitrosococcus halophilus Nc4] Length = 374 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/346 (11%), Positives = 99/346 (28%), Gaps = 9/346 (2%) Query: 1 MPG--ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I+ RY K L +++ I Q E L+ Sbjct: 4 MFKFRIVDRYILKELSLNVTAITLVLLLIFGGIRFIRFLGQATE-GKVPGETILALSTYE 62 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 + ++P + I+V + SE+V+ A GIS LL + ++L I Sbjct: 63 AIGALVLLLPLAAFLAVILVLGRMANDSEIVVLFACGISRGHLLRVVLAFGLVLAIGVGC 122 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + + G L Q+ + + + Q + + Sbjct: 123 ISLYLGPLASAEGYRLKQEAILAAETSGLVAGNFKKTKGGQWVFYAESLTEDRLGMRNVF 182 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 +K + L Y+Y + D + + Sbjct: 183 IQVREPTQKILFRSSRGRLQTDGITGDKHLILEEGYRYDLVGNDVG----IRISRFERHG 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 ++ ++ F K + + + + + + +P+ + + ++A ++ Sbjct: 239 ILVKKGGAQEFRIRHKTLPTLTLWEMG-APKDIAEVQWRVSMPIATLLLVMLAVPLARLE 297 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + + + + ++ I +++ + ++ Sbjct: 298 PRQGRYA-GLVPAVLVYVIYSNMLGISRNWVEHEVIPASLGLWWVH 342 >gi|218659050|ref|ZP_03514980.1| putative permease protein [Rhizobium etli IE4771] Length = 272 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 88/244 (36%), Positives = 135/244 (55%), Gaps = 2/244 (0%) Query: 57 TRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFT 116 R+PL +QQ IPF+ L V + V LNR ELV++RA GIS+WQ + PFV GS+ LG+ T Sbjct: 1 MRLPLNLQQTIPFVALFVGMTVLIGLNRKYELVVTRAAGISVWQFMFPFVAGSLALGVLT 60 Query: 117 VLVINPIATSGEKIGIDLIQQWKDNGDKQKSDI-IPWMQISNPQQDIFIGAKKILPENHI 175 +NP+A G++ + + W+ + IPW++ + + D+ IGA+ + Sbjct: 61 TTALNPLAAWGQRQALLVESDWRGENAVLRKAPQIPWLRQISGRDDVIIGAQTVQENGTK 120 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 D I D ++I R+DA A + + +L VVE + G IP+ K S L +K D Sbjct: 121 LVDAVLIHFDSSGRVIMRQDAATAKLEDGYWQLNGVVERKPGEIPLRKASVQLRTNLKQD 180 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 Q+ + F+++ +++ + I ETQF L+ PL+LVAMTLIAA+VS Sbjct: 181 FVQERLTAPETIGFFDLSNRIAAAKSFGI-STKALETQFNSLLSQPLLLVAMTLIAATVS 239 Query: 296 LEFS 299 L+FS Sbjct: 240 LKFS 243 >gi|268678855|ref|YP_003303286.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] gi|268616886|gb|ACZ11251.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] Length = 353 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 118/357 (33%), Gaps = 5/357 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + Y K YLK L +G + +DL + + N I + A + Sbjct: 1 MKLFETYIIKNYLKNFLVIFIGLDLFYVGVDLLTNYKNIPDSANLQI----LYALFQAMS 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I ++P + IV +F + +T+EL+ A I+ L+ P +++L + + + Sbjct: 57 AINYVLPLSIVFAMIVTYFAMLKTNELICMYASSITKKALVRPLFGVALVLSLLHIGLNY 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G +L + + + + I Q ++ + E Sbjct: 117 TEFAYAYEYGSNLKKYNRISNSSEDLFIKHDQQYVYFKKLDPLKQVAYDVTIFDVESADV 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I + KD K G + + K Sbjct: 177 KRIIRAKMASFVKDVWWLKEVEITHKPSITSLDDKGFWIEKQETLQAMKNFKPKIMDNVY 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S S + I + F + + T FY L ++ + L R Sbjct: 237 QSDFSLSIRDGIDALRFFETQGVNTSKIKSTLFYQLFFPFFAPFLSVILFYNAPL-MGRY 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ + F ++++ + ++ + +L+P A +P+++ +++ +++ Sbjct: 296 FNTALVASSFAFVTLLVWSSLFLLSRLAINSVLIPEIAIFLPIVMLAFIALYFYVKR 352 >gi|291060243|gb|ADD72978.1| putative permease, YjgP/YjgQ family [Treponema pallidum subsp. pallidum str. Chicago] Length = 365 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/363 (11%), Positives = 115/363 (31%), Gaps = 11/363 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+ Y + K L +L ++ FV ++ + Q + S + L +P + Sbjct: 2 LFVYVCEVVFKHILVGVLCFFLVFFVNNVL-LFAQTLLTKHVSAADVVRLLLYSIPAALI 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + PF LV +++ L EL+ + +G+S L+ P + + +F + + + Sbjct: 61 YVTPFAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVV 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + + + + ++ + I + S ++ Sbjct: 121 PASFIRLRQVYWRVLSSVPSLGFESHTTRKHNGVILSVGEVFHSVMYQLLIVDKSDSRSL 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + ++ +++ R + ++ Sbjct: 181 KVVSSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPE 240 Query: 245 ASR-------SFYEIIKKM--SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 S + +++ K N H + +F P+ +V ++ +S Sbjct: 241 YFMGLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLS 300 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 S + G+ + I + ++P A IP ++++ Sbjct: 301 -TLSNISSQGKGFVGGLIVVLGYWIISIGGQELALRLSIVPSLALWIPNAALFFTALILS 359 Query: 356 LQK 358 ++K Sbjct: 360 MRK 362 >gi|311104770|ref|YP_003977623.1| hypothetical protein AXYL_01570 [Achromobacter xylosoxidans A8] gi|310759459|gb|ADP14908.1| hypothetical protein AXYL_01570 [Achromobacter xylosoxidans A8] Length = 367 Score = 73.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 117/355 (32%), Gaps = 6/355 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R +I+ + L + + N VLAA + I Sbjct: 6 RSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAG-GNIGADVVVVLAALSTITALPTI 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + + R SE+V+ A G+S+ L P + +I + + + A Sbjct: 65 LAVSVFIAVLTTVTRNYRESEMVVWFASGLSLADWLRPVLRVAIPVALAVAGLTLVAAPW 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + + ++++ D K + S+ +F + P + + F + Sbjct: 125 AYRQIGEYHERFEQRSDLSKVTAGQF-AESSGGNRVFFAEDPLTPSDELGNVFARENGPE 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 ++ A + N L ++Y P ++ + S Sbjct: 184 WLSVLTASKAHSETMPNGDRFLVLGEGHRYDLKPGTPEIRLVHFDKYGLRLESKSGGDPV 243 Query: 247 RSFYEIIKKMSFSNKSNIF---HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + + + + + +Q + I +PL + + L+A + R + Sbjct: 244 AEARANAERSAKARTTPQLIADNTNSSWSQVMWRISLPLAALNLALLAIPLGAVNPRLGR 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ G+ G + +I + +++ +G L +L++ +L+++ Sbjct: 304 SGDLLIAGL-VGLLYMNLINLSRAWISNGKLSFGLGVWAIHAAVAALTVFLLMRR 357 >gi|208435366|ref|YP_002267032.1| hypothetical protein HPG27_1421 [Helicobacter pylori G27] gi|208433295|gb|ACI28166.1| hypothetical protein HPG27_1421 [Helicobacter pylori G27] Length = 355 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPSSFELGNNALNTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|15639869|ref|NP_219319.1| hypothetical protein TP0884 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026107|ref|YP_001933879.1| hypothetical protein TPASS_0884 [Treponema pallidum subsp. pallidum SS14] gi|3323201|gb|AAC26574.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018682|gb|ACD71300.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 362 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 113/360 (31%), Gaps = 11/360 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + K L +L ++ FV ++ + Q + S + L +P + + Sbjct: 2 YVCEVVFKHILVGVLCFFLVFFVNNVL-LFAQTLLTKHVSAADVVRLLLYSIPAALIYVT 60 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PF LV +++ L EL+ + +G+S L+ P + + +F + + + + Sbjct: 61 PFAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPAS 120 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + + + + + + + ++ + I + S ++ Sbjct: 121 FIRLRQVYWRVLSSVPSLGFESHTTRKHNGVILSVGEVFHSVMYQLLIVDKSDSRSLKVV 180 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + ++ +++ R + ++ Sbjct: 181 SSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYFM 240 Query: 248 -------SFYEIIKKM--SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + +++ K N H + +F P+ +V ++ +S Sbjct: 241 GLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLS-TL 299 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + G+ + I + ++P A IP ++++ ++K Sbjct: 300 SNISSQGKGFVGGLIVVLGYWIISIGGQELALRLSIVPSLALWIPNAALFFTALILSMRK 359 >gi|317181181|dbj|BAJ58967.1| hypothetical protein HPF32_1385 [Helicobacter pylori F32] Length = 355 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 115/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + K + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLKFELGANALNTTHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P ++ ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFLVFLALSLWYFKKL 351 >gi|54113817|gb|AAV29542.1| NT02FT0415 [synthetic construct] Length = 353 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 114/346 (32%), Gaps = 19/346 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY F+ + L + IL F+ + N S + ++P I+ Sbjct: 6 IDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSN--NTANVSNFELIINTLIQLPGILY 63 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA Sbjct: 64 TLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIA 123 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ + + + K+ F+ I P N + Sbjct: 124 PILQRQVDTNMVTYNTHDLWFKTPDG------------FMNIANIEPTNGKAYGIRKFMV 171 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R I + + + + + K+ + Sbjct: 172 QDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISV 231 Query: 245 ASRSFYEIIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 A ++FS SN +F+ + PL L+ + L+A +S+ + Sbjct: 232 AKVITINDNNYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGST 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 RS+ + + G F GF + I I L P+ A P + Sbjct: 292 RSSTLILKLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTV 337 >gi|109948225|ref|YP_665453.1| hypothetical protein Hac_1758 [Helicobacter acinonychis str. Sheeba] gi|109715446|emb|CAK00454.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 355 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 111/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L P S+ V + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQVLKPIFFISLFFTAIYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYDDDYVYFGKIDPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + N+ + + + + Sbjct: 179 AEANEAFFEGKHWTLHDATIYSLPLNFDLGNNALSAMHLETFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + +++ A S +R Sbjct: 239 PAVSIMDALFSLHAL-VRQKADTKKVRSFLYVFAILPFFVPFLSVFIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L+P L + +S+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPELGVLLPFFLFLIISLWYFKKL 351 >gi|213423382|ref|ZP_03356370.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 207 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 1/163 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI 164 +A GE++ + Q G + W + N I Sbjct: 123 WVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIER 165 >gi|108563840|ref|YP_628156.1| hypothetical protein HPAG1_1415 [Helicobacter pylori HPAG1] gi|107837613|gb|ABF85482.1| hypothetical protein HPAG1_1415 [Helicobacter pylori HPAG1] Length = 355 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 115/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDRTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + K + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKL 351 >gi|110634108|ref|YP_674316.1| permease YjgP/YjgQ [Mesorhizobium sp. BNC1] gi|110285092|gb|ABG63151.1| permease YjgP/YjgQ [Chelativorans sp. BNC1] Length = 416 Score = 73.6 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 106/335 (31%), Gaps = 20/335 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + L L +++V+ + + + S + +A +P Sbjct: 24 MKVIERYILRRTLAIFAASLAWLLVIVWTTQVLNRLD-LVTSSGQSAATFFTVAFLTLPS 82 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+PF+ + +N SELV+ A G ++ P ++ +I+ I + N Sbjct: 83 VVPVIMPFVIGIAVAQTLATMNADSELVVISAAGSPRSTIIWPILIIAIIASIAAFAINN 142 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + ++ + + ++ + IF+ + LP + F Sbjct: 143 TLEPYSRQKMRTILANANADLITTVLREGSFRKVVD---GIFVQISERLPNGELGGIFVI 199 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKL--------KKVVEYQYGRIPIDKNSTTLNIPIK 233 + D K+ +R + + + L ++V I D + L+ Sbjct: 200 DSRDPNLKLAYRAERGATVKRDGGNILVLLEGEVQRQVANGDVSVIRFDSYAFDLSQFTN 259 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 +G + S N + + L + LI + Sbjct: 260 GEGVPTLFPKDRYLSELLEPDPNDKFFAKNPQS---FRAELHTRFSEWLYPIVFALIGIA 316 Query: 294 V-----SLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 V S +R + + G+ + + Sbjct: 317 VAGDARSFRETRLHPMVTTLTIGLLVRWAGFYASN 351 >gi|83945296|ref|ZP_00957645.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] gi|83851466|gb|EAP89322.1| hypothetical protein OA2633_00975 [Oceanicaulis alexandrii HTCC2633] Length = 375 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 110/330 (33%), Gaps = 9/330 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY F+ L L + L + + M E + + +P +I + Sbjct: 6 RYTFRQALWPFLGAMAALTGLAVLTQSLSNLDLMAERGE-TALVLITITVLAMPQVIALL 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + + L SEL ++ A G+S +Q ++PF+ +I + + +++ + + Sbjct: 65 LPIAVFLAVAIALNRLTSDSELTVAAAAGMSRFQRVSPFLRLAIYVVLVNLVINLFVQPA 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + + + ++ + Q F + + Sbjct: 125 SFRLMRQQLFEIRTDLAASFMREGEFVPL--GDQVTFYVREISDDSVLNDVFIMDDRTGQ 182 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNIPIKMDGFQKFSE 242 R+ A + L+ V Q + + +ST + + + +D Sbjct: 183 SAAYAARRGRIAATDRGPVMLLEDGVRTQVDQSGVLTNLSFDSTKVELTLFVDNTASLFF 242 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML-VAMTLIAASVSLEFSRS 301 + + + E+++ ++ + R + ++ + PL + A+ R Sbjct: 243 KESDKYLPELLRPT-PADIARAGGKGRLYAEGHYRLSAPLYNLAFALIALAAYMSGEHRR 301 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKS 331 + S +L +++ +S Sbjct: 302 IGYGRNLIIAGASAVVLRLTGFAIQAAAES 331 >gi|323525104|ref|YP_004227257.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] gi|323382106|gb|ADX54197.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1001] Length = 365 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 37/356 (10%), Positives = 104/356 (29%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAAQGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ Q + P + + + I + + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIVILIMFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI-SNPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + S + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESASTHRVFFIEKMSPDQGHVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y+ D Q Sbjct: 181 NGKVNVVVSKNGHTETHKNGDRFVVLENGRRYEGEPGHPDFRIMEFERYGVKIESQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGT--------PTLTLLRNPTNENLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA-ALIPVILTISLSILILLQ 357 + I + + ++ +++S+ + G + ++ VI+ ++ + L+ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVILHVIVAGIVAFIFWLR 347 >gi|327396302|dbj|BAK13724.1| inner membrane protein YjgP [Pantoea ananatis AJ13355] Length = 308 Score = 73.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 94/293 (32%), Gaps = 6/293 (2%) Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q I+P + ++ L SE+ + A G+S L+ +V + + + + Sbjct: 1 MAQLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVI 60 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + Q K N + S+ +F+ K H++ Sbjct: 61 WLGPWSSRYQEQVTQNAKANPGAAALAAGQFQTSSDGSAVLFLENVKGNQFGHVFLAQLR 120 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + + + ++ + ++ + Sbjct: 121 PKGNARPSVVLADSGHMEQKKDGSQIVTLDKGTRFEGTALLRDFRITDFTNYQAYVGYKQ 180 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + ++ I + ++ M L+ +S+ R Sbjct: 181 ATLDPNDVDQ-----ATFATLLSNKTPEFRAELHWRITLVFAVLVMALMVVPLSVVNPRQ 235 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + + + + ++S G G L P + I ++L+I++ Sbjct: 236 GRV-LSMLPAMLLYLIFFLLQSSLRSSGAKGRLDPAIWMWVVNISYLALAIVL 287 >gi|307638154|gb|ADN80604.1| Permease [Helicobacter pylori 908] gi|325996753|gb|ADZ52158.1| Permease [Helicobacter pylori 2018] gi|325998348|gb|ADZ50556.1| hypothetical protein hp2017_1432 [Helicobacter pylori 2017] Length = 355 Score = 73.2 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 114/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+LNP S+ V + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKRQILNPIFFISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|110598486|ref|ZP_01386757.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] gi|110339936|gb|EAT58440.1| permease YjgP/YjgQ [Chlorobium ferrooxidans DSM 13031] Length = 435 Score = 73.2 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 36/423 (8%), Positives = 109/423 (25%), Gaps = 71/423 (16%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELP-------NYSISRGAVL 54 I+ RY K ++ L+ + + ++ + ++ I + A + Sbjct: 1 MKIIDRYILKSHVGPFLFAFITILFVLILQFFASFADRFIGRGIAFSAIVELIILQSAWM 60 Query: 55 AATRVPLIIQQIIPFIT--------------------------LVVNIVVFFNLNRTSEL 88 P+ + + L V +++ + R + + Sbjct: 61 VGLAAPMAVLIAVVMAFGSLTTNSEMTVLRASGISLYRLMFPVLCVALLLSLCVERFNNI 120 Query: 89 VISRAI-GISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 V+ A + + L + + + D ++ + +S Sbjct: 121 VLPLANYHAKSLMVDIARAKPAFGLKENAFSTLVDGYSILVREADDQSKEIRGVVIYDRS 180 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 + + I + + +++ + Sbjct: 181 RPNFTTMETAERGTIEFSGDFQYLVMTLLDGEIHQVKQPAHQVYRNLSFKKYRFVFESSG 240 Query: 208 LKKVVEYQYGRIPIDKN---STTLNIPIKMDGFQKFSEQFASRSFYEIIKKM-------- 256 D L+I + SE+ + S + +++ Sbjct: 241 FGFARTSANRLRTGDSELSARELLSIGDEFQKRIAASEKRINLSLESMNRQIAGTGSGGS 300 Query: 257 -------------------------SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA 291 S +N R ++ + L L+ Sbjct: 301 ADESRKKEIAAEGYVDRQLAALDAERQSISANRSMYNRYMAAYHKKYSLSLACFVFVLVG 360 Query: 292 ASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLS 351 A + + +R + + + + ++ ++ + G+L P+ + + I+ ++ Sbjct: 361 APLGV-LARRGGFGVGAGMSLLFFVLYWMLMISGETIAERGLLDPMLSMWLGNIVISAIG 419 Query: 352 ILI 354 IL+ Sbjct: 420 ILL 422 >gi|308183601|ref|YP_003927728.1| hypothetical protein HPPC_07350 [Helicobacter pylori PeCan4] gi|308065786|gb|ADO07678.1| hypothetical protein HPPC_07350 [Helicobacter pylori PeCan4] Length = 355 Score = 73.2 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 116/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + + Sbjct: 179 AEAKEAFFKDKYWILHDTTIYEMPLSFELGNNALNTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|119899193|ref|YP_934406.1| hypothetical protein azo2903 [Azoarcus sp. BH72] gi|119671606|emb|CAL95519.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 359 Score = 73.2 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 114/356 (32%), Gaps = 10/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + + +T + ++ I L + Q L + Sbjct: 2 IFRRALLREFSQTAAAVFVALFAILVTIVLIRLLGQAAG-GGVPSDAVLALIGFGALTEM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V ++ R SE+V+ A G+ + + P + ++ + + + Sbjct: 61 PVVLTLTLFVAVLLTLSRSYRDSEMVVWFASGVPLTAWIGPVLRFALPVVAVIAGMTLFL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ + D Q+ + + + ++ F+ + Sbjct: 121 SPWAHMKNAEYRERLESRDDTQRVAPGVFRESAGSRRVFFVEVGAGEDGRVRNVFVSDEN 180 Query: 184 IDKKNKIIHRK-DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 D+ + I + N V L+K Y + + ++ + Sbjct: 181 GDRLSVIAAAEGYLKTDEEGNRFVVLEKGRRYDGKPGTPEYRVMSFERYSVQIEAKQAAA 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 Q + + + + R + + PL + + L+A +S R+ Sbjct: 241 QPQ-------RSRARPTEELLRSPDDRNLGELAGRVGTPLAALLLALLAIPLSFVNPRAG 293 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + I + + ITI +++ G L A L+P ++ + L L+ ++ Sbjct: 294 RTN-NLLVAILTYLIYSNAITIGQAWVAQGRLRFELAVLLPHLVVLGLLALMFYKR 348 >gi|188997596|ref|YP_001931847.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932663|gb|ACD67293.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 356 Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 138/358 (38%), Gaps = 14/358 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y +K L I+ +I+L EI + S + T++P Sbjct: 1 MRILDAYIYKKLFVYLLIIFPSFSIVSALIELIEILKKAKT---IEFSTLTLYILTKLPE 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IIP +V + + + ++ E+ GIS+ + ++ SIL+ I V+ + Sbjct: 58 NAYYIIPISLIVASFMFINDSIKSREIYPVILNGISLNYISIRIIIFSILVVILQVINLE 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I L + K+ + +K I + ++ F+ + + + Sbjct: 118 TVMPKTNQIYQTLYLKLKNQQEDEKVKGIAYKMWLKIGENQFLYFDFFDLNSKVGKKLIF 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGF 237 I+ DK+ I+R +A+ + DK+++ + + + L+I I ++ Sbjct: 178 ISFDKEFNPIYRLEAEDFKVSLDKIEVSNGRLIKINSLDNIIVEKFDKKILDINIDVENI 237 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 +K S E+ K++ +++ + +Y ++FY + + +T+ Sbjct: 238 KKIILAKKPVSISELY-KIASISQAYGYESYYFWSKFYEKLATVIAPFVLTVFILGFIWT 296 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ + + G + + +++ + + G + P + ++ + + +L Sbjct: 297 NNK-----LYITSGFLATVFYWYGTSLISAVAEVGNI-PYFSIFFFDVVFLVIGFYML 348 >gi|121595375|ref|YP_987271.1| permease [Acidovorax sp. JS42] gi|120607455|gb|ABM43195.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 396 Score = 73.2 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 118/352 (33%), Gaps = 4/352 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + + L L ++ + L + + + SI+ +LAA VP + Sbjct: 9 LDRYAVRLFAVPLLTALATMLLATMLQRLLRLFD-IAASTGASIASVLLLAADLVPHYLG 67 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + + SEL A G SI ++ P+ + ++ + +F + + + Sbjct: 68 LALPVAFTAAIFMAAARMGDDSELDAMLATGRSIARIAAPYFILALFVCVFNLYLFGRLQ 127 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + K + ++ I + I Sbjct: 128 PLARYDYHVKMDAVLQTNWDAKIEENRFIDI-AHGFSFSADRVEDGGRRFIGVFMERRQN 186 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + K++LK + + P +TT + ++ F K + Sbjct: 187 GIEEITTAVRGQLESNPDTRKMRLKLEDGLRVRQTPDGAIATTRFVDGYVEDFSKTRAPY 246 Query: 245 ASRSFYEIIKKMSFSNKSNIFH-NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 R + + + + + +F+ + L+ + + L+A + + R + Sbjct: 247 RDRGETATERTLPELWLAMCKTCDPDSAAEFHSRLARALLPLLLPLLALPLGMASKRGRR 306 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 +V + + +T+ KS +SG L A P +L LS+ I Sbjct: 307 TPGVVFASLALLLLNHTLQ-FGKSLAESGRLPAALAVWTPFLLFALLSLWIF 357 >gi|321222551|gb|EFX47623.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 335 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 106/311 (34%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 +V ++ GI + + K +++ + K N + Q +N +F Sbjct: 70 AAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGNSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + N RA + ++ I + Sbjct: 190 DFRITDFQNYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L PV Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAV 303 Query: 344 VILTISLSILI 354 ++ ++L+I + Sbjct: 304 NLIYLALAIGL 314 >gi|207091759|ref|ZP_03239546.1| hypothetical protein HpylHP_01146 [Helicobacter pylori HPKX_438_AG0C1] Length = 355 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 117/354 (33%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + K + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLKFELGANALNATRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKL 351 >gi|317014913|gb|ADU82349.1| hypothetical protein HPGAM_07880 [Helicobacter pylori Gambia94/24] Length = 355 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 112/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+LNP S+ V + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKRQILNPIFFISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDRTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALFSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|33597808|ref|NP_885451.1| putative integral membrane protein [Bordetella parapertussis 12822] gi|33574237|emb|CAE38569.1| putative integral membrane protein [Bordetella parapertussis] Length = 370 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 108/318 (33%), Gaps = 5/318 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + LAA + I+ + + R SE+V+ A G+S+ L Sbjct: 42 GSIGADVVLGLAAFSTITALPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLR 101 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 P ++ + + + + + + ++++ D K + + + F Sbjct: 102 PVARVAVPIAMLVAALTLVASPWAYRQIGEYRERFEQRSDLSKVTAGQFAESGRGDRVFF 161 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + P + + F + ++ +A + N L ++Y P Sbjct: 162 A-EDPVRPGDELGAVFARSIDPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTP 220 Query: 224 NSTTLNIPIK---MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 +N ++ +R+ E K + + + + +Q + + + Sbjct: 221 EIRLVNFDQYGVRLESKAGEDPMAEARAAAERFSKARSTMQLVQDNTDSSWSQIMWRVAM 280 Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 PL + + L+A + R + ++ G+ G + +I + +++ SG + Sbjct: 281 PLAALNLALLAIPLGAVNPRLGRSGDLLIAGL-VGLLYMNMINLSRAWISSGKISFSIGV 339 Query: 341 LIPVILTISLSILILLQK 358 + L+ +L+++ Sbjct: 340 WAVHAVVALLAAYLLMRR 357 >gi|313205632|ref|YP_004044809.1| permease yjgp/yjgq family protein [Riemerella anatipestifer DSM 15868] gi|312444948|gb|ADQ81303.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer DSM 15868] gi|315022637|gb|EFT35662.1| hypothetical protein RAYM_03529 [Riemerella anatipestifer RA-YM] gi|325334940|gb|ADZ11214.1| permease YjgP/YjgQ family protein [Riemerella anatipestifer RA-GD] Length = 484 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 1/269 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K + L+ + V + Q S L Sbjct: 1 MLKKLDRYIIKTFFGPFLFIFSVLFFIFLVNIIWIKLYQFTGK-GLSPFEIGKLLFYMGV 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ ++P L+ +I+ F EL +A GIS+++++ P + LL I + Sbjct: 60 SVVNMVLPLTVLLSSIMTFGAFGERYELAAMKAAGISLFRIMRPLIFVVTLLSIILFIFS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N + + +++ ++ F EN Sbjct: 120 NNVIPDFNRKAKNMLYNIAVTKPALNFTAGQFIGAIPGASVKFDKISGENGENLEGIIIH 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + ++ LK ++ Y + + + + KF Sbjct: 180 KEVNGNNPQQTIIAPKGKFVPAQNRNYLKLILYKGYVYEDENTSYNYNERTKQPNKSIKF 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYR 269 A E++ K K + ++ Sbjct: 240 DSLVAHFDVSELVNKAIEEEKITENYQFQ 268 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 106/346 (30%), Gaps = 12/346 (3%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 + LL ++ +F ++ N+ + Y+I+ A IP ++ + Sbjct: 106 FVVTLLSIILFIFSNNVIPDFNRKAKNMLYNIA-VTKPALNFTAGQFIGAIPGASVKFDK 164 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + N ++I + + + Q G + + + D Sbjct: 165 ISGENGENLEGIIIHKEVNGNNPQQTIIAPKGKFVPAQN--RNYLKLILYKGYVYEDENT 222 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 + N ++ + D+ K + E I E++ T N I + + Sbjct: 223 SYNYNERTKQPNKSIKFDSLVAHFDVSELVNKAIEEEKITENYQFQTYLDINGSIAQLEK 282 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 + +++ Y + P K+D +K + + Y+ I + Sbjct: 283 EQKTRFDNISNELVAQNNFYVNYLDKSKNKKATQPFKIDTLKKEKKIEILYNAYQKINTL 342 Query: 257 SFSNKSNI--------FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 KSN + ++ + + LI +S+ R V Sbjct: 343 KEDKKSNKDPELYEMLKQRSKMIMYQQRILSFSITCIIFFLIGSSLG-SIIRKGGIGFPV 401 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + Y + +++ G L P AA +P ++ L I Sbjct: 402 VIAIVIFIIFYVLNLTVENLSWKGKLNPYLAAWLPNLILAPLGIWF 447 >gi|33602710|ref|NP_890270.1| putative integral membrane protein [Bordetella bronchiseptica RB50] gi|33577152|emb|CAE35709.1| putative integral membrane protein [Bordetella bronchiseptica RB50] Length = 370 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 108/318 (33%), Gaps = 5/318 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + LAA + I+ + + R SE+V+ A G+S+ L Sbjct: 42 GSIGADVVLGLAAFSTITALPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLR 101 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 P ++ + + + + + + ++++ D K + S +F Sbjct: 102 PVARVAVPIAMLVAALTLVASPWAYRQIGEYRERFEQRSDLSKVTAGQF-AESGRGDRVF 160 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + P + + F + ++ +A + N L ++Y P Sbjct: 161 FAEDPVRPGDELGAVFARSIDPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTP 220 Query: 224 NSTTLNIPIK---MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 +N ++ +R+ E K + + + + +Q + + + Sbjct: 221 EIRLVNFDQYGVRLESKAGEDPMAEARAAAERSSKARSTMQLVQDNTDSSWSQIMWRVAM 280 Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 PL + + L+A + R + ++ G+ G + +I + +++ SG + Sbjct: 281 PLAALNLALLAIPLGAVNPRLGRSGDLLIAGL-VGLLYMNMINLSRAWISSGKISFSIGV 339 Query: 341 LIPVILTISLSILILLQK 358 + L+ +L+++ Sbjct: 340 WAVHAVVALLAAYLLMRR 357 >gi|319898731|ref|YP_004158824.1| permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] gi|319402695|emb|CBI76241.1| putative permease, YjgP/YjgQ family [Bartonella clarridgeiae 73] Length = 385 Score = 72.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 111/359 (30%), Gaps = 7/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K ++GA+ + + + + N + ++ +P Sbjct: 1 MRILELYILKRIFLLFSAVMIGAIGISWTVQILARIN-FLTTSGQTFLTVLHFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++PF ++ ++ +N+ SEL + A GI + P ++ +IL + + + N Sbjct: 60 VTSLVMPFGLVIAITIILSTMNQDSELAVISASGIPKNIIWKPILLLAILTSLTSFSITN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA + ++ + + Q I IG Sbjct: 120 FIAPNARLNMRQMLANTHSDLINLFIREGSF-QELTKNLYIEIGETNTNGTIGRLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK----MDGF 237 +K + + + L + + + + Sbjct: 179 RDRQFGLFYYAKKGIIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSHTFSLSEFITN 238 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 ++ + + ++ + +F+ + L + LIA +++ + Sbjct: 239 KRTPNIYPKDRPLSYLSNPDPNDPHYQRKPLQYRAEFHRRLTECLYPIVFALIAVAIAGD 298 Query: 298 FSRSNQPRIIVAYGIF-SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 Q I + + ++Y + ++ + +IP+ ++I ++L Sbjct: 299 ARSYRQTHISSTFSVISFSLLIYWLGYFFAKKTENNPVYIPLLYIIPIGISILTFFMLL 357 >gi|297623245|ref|YP_003704679.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297164425|gb|ADI14136.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 374 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/360 (10%), Positives = 105/360 (29%), Gaps = 24/360 (6%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L+ LL L + ++ + + A ++P I Sbjct: 3 LDRYLLRECLPALLFSLLLYSGLAVT---SANFPRLQWIIGTPLWGMLGWLALQLPTAIV 59 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q +P L+ ++ F L +EL+ +A G+++ +L P + +L + + + Sbjct: 60 QTLPIALLLAVLLTFGRLAAANELLAVQAGGVALRRLSAPMLALGLLAAGCALAMNQWVL 119 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L + G + + ++ + + Sbjct: 120 PRANVRVGALWWELTSGGSGLFRLERQSIPLGEFSLSFAATDRRTDDLFGVRLEAWRGRQ 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVK-----------------LKKVVEYQYGRIPIDKNSTT 227 + + + + + + R P Sbjct: 180 LSVVLAERARFVEGGLELYGYQNAVLDVGSLRDGAGTPEAQLQALVRLHNRAPSPDAPLR 239 Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ--FYFLIVIPLMLV 285 + +D + + + +N ++ R F+ + P + Sbjct: 240 ITFAEDVDELITRFSGGGFEDTRSVTRTLRDANDPSLSAAERRAAAVLFHRKLAEPFANL 299 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + +A +++ +RS ++ + + Y ++T+ + ++G+L Sbjct: 300 TLLAVALPLAVLHARSRSVAFGLSLAVTLAW--YLLLTLGQLLAQAGVLPVWLGLWFGNA 357 >gi|254780008|ref|YP_003058115.1| putative permease; putative membrane protein [Helicobacter pylori B38] gi|254001921|emb|CAX30174.1| Putative permease; putative membrane protein [Helicobacter pylori B38] Length = 355 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 116/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLETFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|15964907|ref|NP_385260.1| hypothetical protein SMc00584 [Sinorhizobium meliloti 1021] gi|307300977|ref|ZP_07580746.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] gi|307317712|ref|ZP_07597150.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|15074086|emb|CAC45733.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306896474|gb|EFN27222.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti AK83] gi|306903932|gb|EFN34518.1| permease YjgP/YjgQ family protein [Sinorhizobium meliloti BL225C] Length = 390 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 111/354 (31%), Gaps = 10/354 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY F+ L LL M +V+ N + + SI LA +P Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALTNVNLVTD-SGQSIIAFLKLATLILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+PF ++ +N SEL + A G S ++ P + + L + + + N Sbjct: 60 VVPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFAIDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + + +I++ + I+ Sbjct: 120 FVEPYSRVAVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLQGIFVAD-- 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D ++++ + +K ++ + + + + Sbjct: 178 -ARDPNFELVYYAREGAVDEERSALVMKDGEVHRKLPDGDVSIIKFDSYAFDLTDLTRMA 236 Query: 242 EQFASRSFYEIIKKM---SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + R+ + + +++ + + + LIA VS Sbjct: 237 GEANIRAKDRDLFYLLDPDPDDEAYKRAPLAFTAELHRRFTEWTFPLLFGLIALVVS-SD 295 Query: 299 SRSNQPRII--VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 +RS++ + + + + ++ + + + + L+P++ Sbjct: 296 ARSHREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYLVPLVTGALA 349 >gi|332674268|gb|AEE71085.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 355 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 115/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGNNALNTTHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|150395989|ref|YP_001326456.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] gi|150027504|gb|ABR59621.1| permease YjgP/YjgQ family protein [Sinorhizobium medicae WSM419] Length = 390 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 111/354 (31%), Gaps = 10/354 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY F+ L LL M +V+ N + + SI LA +P Sbjct: 1 MKLIERYIFRRATIMFLATLLPLMGIVWTTQALANVNLVTD-SGQSIIAFLKLATLILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+PF ++ +N SEL + A G S ++ P + + L + + + N Sbjct: 60 VVPIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFTIDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + + +I++ + + I+ Sbjct: 120 FVEPYSRVSVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLHGIFVAD-- 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D ++++ + +K ++ + + + + Sbjct: 178 -ARDPNFELVYYAREGAVDEGRSALVMKDGEVHRKLPDGDVSIIKFDSYAFDLTDLTRMT 236 Query: 242 EQFASRSFYEIIKKM---SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + R+ + + +++ + + + LIA V+ Sbjct: 237 GEANIRAKDRDLFYLLDPDPDDEAYKRAPRAFAAELHRRFTEWTFPLLFGLIAL-VASSD 295 Query: 299 SRSNQPRII--VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 +RS++ + + + + ++ + + + + LIP+ Sbjct: 296 ARSHREARVHPMVSALGAALVIRWMTFYAANSAEDSVWFVPLMYLIPLATGALA 349 >gi|15612456|ref|NP_224109.1| hypothetical protein jhp1391 [Helicobacter pylori J99] gi|4156011|gb|AAD06972.1| putative [Helicobacter pylori J99] Length = 355 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTHLETFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|86749600|ref|YP_486096.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] gi|86572628|gb|ABD07185.1| permease YjgP/YjgQ [Rhodopseudomonas palustris HaA2] Length = 388 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 107/363 (29%), Gaps = 13/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + Y F+ L + + ++++ + + +I L VP+ Sbjct: 1 MGSIDSYIFRTTLTSFAVVMASLTGVIWITQALRGID-LMTSQGQTIVTFLGLTGLAVPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I P ++ L SE+++ A G+S +L PFV +I + L+ + Sbjct: 60 LILVIAPIALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLFRPFVYATIFVAALVTLIGS 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA G + + + + Q+ + ++ D Sbjct: 120 YIAPDGLRRIARWDAEITADVLANVLQPGRFAQLEQNLTIRVRERQAGGLLVGVFIDDRR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D+ + I + V +E G M F + Sbjct: 180 DPADRVSIIADHGTVLKNKDGSFLVLEDGHLERFQGGKQEPTLVAFSRYAFDMSKFSRAR 239 Query: 242 EQFASRSFYEIIKKM--SFSNKSNIFHNYRAETQFYFLIVIPLML-----VAMTLIAASV 294 + + + + + + + ++ + ++ P+ V + Sbjct: 240 DVAYGIREHYLWELIWPDPKDPLLAQLPTQFRSEMHDRLLAPIYPFFFAAVTFAFLGMPR 299 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + SR+ V + + + L + A + I+ S+ + Sbjct: 300 TTRQSRNFSMIGAVLCAFVVRLAGFALSVVANHTPYIAGLQYLLLA-----VAIAASVWL 354 Query: 355 LLQ 357 + + Sbjct: 355 IRR 357 >gi|326626150|gb|EGE32495.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 335 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 106/311 (34%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 +V ++ GI + + K +++ + K N + Q +N +F Sbjct: 70 AAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + N RA + ++ I + Sbjct: 190 DFRITDFQNYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L PV Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWMWAV 303 Query: 344 VILTISLSILI 354 ++ ++L+I + Sbjct: 304 NLIYLALAIGL 314 >gi|317011633|gb|ADU85380.1| putative permease; putative membrane protein [Helicobacter pylori SouthAfrica7] Length = 355 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 115/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+LNP S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKRQILNPIFFISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTMRLETFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALFSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|158425949|ref|YP_001527241.1| putative permease precursor [Azorhizobium caulinodans ORS 571] gi|158332838|dbj|BAF90323.1| putative permease precursor [Azorhizobium caulinodans ORS 571] Length = 387 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 117/359 (32%), Gaps = 6/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G L RY F + L +++ + + +I + + +P Sbjct: 1 MGRLDRYIFSTSAVAFVGVTLVLTGMIWATQALRQLD-LVTSQGQTILAFLAITSLTLPT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I P + LN SE+V+ A G+S W++L ++ ++L +F + Sbjct: 60 LIMVIAPAALFIATSYTLLKLNGDSEIVVMAAAGMSPWRVLRSLMLLAVLASVFCSALSI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + D + + + + + ++ ++ K + ++ + Sbjct: 120 HIVPASLRSFRDQVSRVRADVVSFVAQPGRFVNLAPGLVFHVRDRAKNGVMSGVFINDAR 179 Query: 182 ITIDKKN-----KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 +I+ + ++ N + + G + + + G Sbjct: 180 EKEVSTYVADRGQIVEADNGIFLVLENGSIHRRVPGAASNGSVVEFQRYAFDLSALTPGG 239 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q ++ + + I + I R +++ + L +A IAA+ Sbjct: 240 SQSGADIRPNERSFAYISNPPKDDPYMIVQPGRFREEYHKRLSAGLYPLAFFAIAAAAMA 299 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + R + I I + V A + +LTI +S L+L Sbjct: 300 RPRTTRESRGLALAAIVPIMTALQIANFAVAGQLRTAAWAVPAIYLIPLLTIIVSALVL 358 >gi|307728896|ref|YP_003906120.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] gi|307583431|gb|ADN56829.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1003] Length = 365 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 104/356 (29%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAAQGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ Q + P + + + I + + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGMFATPIIILIMFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS-NPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + + + + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y D Q Sbjct: 181 NGKLNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVRIESQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGT--------PTLTLLRNPTKENLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA-ALIPVILTISLSILILLQ 357 + I + + ++ +++S+ + G + ++ VI+ ++ + L+ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQSWIEQGKMSFGVGLVILHVIVAGIVAFIFWLR 347 >gi|56698597|ref|YP_168974.1| hypothetical protein SPO3780 [Ruegeria pomeroyi DSS-3] gi|56680334|gb|AAV97000.1| membrane protein, putative [Ruegeria pomeroyi DSS-3] Length = 375 Score = 72.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 46/365 (12%), Positives = 110/365 (30%), Gaps = 18/365 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M YF + L +F + + ++ + +++ + A +P Sbjct: 1 MSK-FDGYFLRQLLVLCGFFAFVLVGVFWISKAVSLFDRLIS-SGQTAMVALEFTALTLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +++ ++P + V LNR SE+ + A G S ++L P ++ ++ + Sbjct: 59 TLVRTVMPMAAFCATVYVTNRLNRESEMTVMLATGSSPFRLARPVILFGLVCAAMLATIT 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + + Q + +M + + KI + + + + Sbjct: 119 LYLRPAAMLRLEARQAEVAGDMTAQLLNDGQFMHPVK---GVTVYIGKIDRDGTLNDVYL 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-------KNSTTLNIPIK 233 S + + + +++ L V + +I Sbjct: 176 SDRRAPERVVTYTSSKAFLARSGEQIALVMVEGTALQMETGRRTLSTTVFRDFSYDISAL 235 Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 + + + + + + + + VA+TLI S Sbjct: 236 AKRDIERRQDIRGMPTLALATAFDGEGLAETYSRGEISEELQERLSWIGVSVAVTLIGFS 295 Query: 294 -VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS--GILLPVAAALIPVILTISL 350 + L + L + + +F S G+ A P + I+L Sbjct: 296 TLMLGTFSRFGLWPQLIAAFAGLIALEGMRSTATAFVGSHPGLWWVQHA---PALGGIAL 352 Query: 351 SILIL 355 SIL L Sbjct: 353 SILFL 357 >gi|21673570|ref|NP_661635.1| hypothetical protein CT0740 [Chlorobium tepidum TLS] gi|21646682|gb|AAM71977.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 452 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY K +L T + + M + + L + ++ + A + Sbjct: 11 MKIFDRYILKEHLGTFFFAFVTIMFVFILTFLTQFLERLIGK-GLDFRIILEVVALQSAW 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P LV ++ F +L +SEL + RA GISI++L+ P ++ ++ L + N Sbjct: 70 MVGLAVPMAVLVSTVMAFSSLTNSSELTVMRAGGISIYRLVAPVLLAALALSLMMERFNN 129 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + L D + Sbjct: 130 VLMPEANYKANALFADITRMKPGLGIDKNAF 160 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Query: 260 NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLY 319 + N Y +++ + V +I A + + +R A +F + + Sbjct: 346 MRENRESFYNYMIEYHKKYSLAFACVVFAMIGAPLGV-MARHGGFGAGAALSLFFFVLYW 404 Query: 320 TIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ + + G+LLP + +P ++ + ++ + Sbjct: 405 VLLIGGEKIAERGLLLPAISVWLPNVVLAVTGLFMIYRL 443 >gi|308185268|ref|YP_003929401.1| hypothetical protein HPSJM_07640 [Helicobacter pylori SJM180] gi|308061188|gb|ADO03084.1| hypothetical protein HPSJM_07640 [Helicobacter pylori SJM180] Length = 355 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+LNP + S+ V + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILNPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|218296646|ref|ZP_03497364.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218242959|gb|EED09492.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 368 Score = 72.4 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 43/369 (11%), Positives = 104/369 (28%), Gaps = 20/369 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L+R+ K L LL + L I + + VP ++ Sbjct: 2 TLYRHLLKESLPVLFLTLLFLTAIFLFGFFYAGAR---WLEGVPIPKILRWLSYHVPGVL 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q P + ++VF L + G+ +W+ P + LL + + + + Sbjct: 59 VQAFPIALVTTTVLVFGRLAAEGAQFALLSGGVPLWRAALPLLWLGALLSVAALYLQEYV 118 Query: 124 AT-SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ + + G + I + F E + Sbjct: 119 VPEANNRVRVAWWDEIHTQGAGLFRLKGMQIPIGQGRSLYFEDFDMERKEMVGVRIVSFQ 178 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST--------------TL 228 R D +I + +V + + ++ L Sbjct: 179 GEVGTFLFAERGTWDDRLITLRGYRFYRVDFREVPGLEGARDLLAQVRRVFRAVSRGEVL 238 Query: 229 NIPIKMDGFQKFSEQFASRSFYE--IIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 + + + ++ + SF + + + + + R + F + L L Sbjct: 239 EVESDLSRARAIADYADTFSFGQNSLSQAWRKARDPFLPPLERDRARLEFHSKLALPLAN 298 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 + L+ + ++ + + + Y + ++ G + P A +L Sbjct: 299 LVLVLLAAAMALRYGRSTGLALGLSVVLALGYYGAFFLGRALAGVGAIPPELGAWGANLL 358 Query: 347 TISLSILIL 355 L + L Sbjct: 359 FFLLGVRAL 367 >gi|326408706|gb|ADZ65771.1| permease YjgP/YjgQ family protein [Brucella melitensis M28] gi|326538430|gb|ADZ86645.1| permease YjgP/YjgQ family protein [Brucella melitensis M5-90] Length = 388 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 107/345 (31%), Gaps = 9/345 (2%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 L A+ + + + + + N + ++ +P I ++PF ++ Sbjct: 2 FFAVLGAAVGITWTVQVLQRIN-FLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAIT 60 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 +N+ SELV+ A G ++ P ++ + + + + L+ N + +I Sbjct: 61 QTLSTMNQDSELVVINASGAPRSAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIA 120 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI------TIDKKNKI 190 + + ++++ + ++ + I Sbjct: 121 NASADLMHVIIQEGTFRKLADNLYIQIAERRADGSIGGLFIADSCDPTLDLIYYAADGAI 180 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 D+ ++ N +V+ + V + I D + LN + ++ Sbjct: 181 ASTPSGDMLLMENGEVQRRNVSDGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYL 240 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 ++ + + + PL+ AM +A + R + Sbjct: 241 LNPDSNDPMLQTRPLTYKAELHRRFTQWIYPLI-FAMIALAIAGDSRSHREARVSAS-FS 298 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I + ++Y + L+P+++ + ++L Sbjct: 299 AISTALLVYWAGYFASDRADKDPSYILVMYLVPLVVFLVTGFILL 343 >gi|297380647|gb|ADI35534.1| Hypothetical protein HPV225_1517 [Helicobacter pylori v225d] gi|308064258|gb|ADO06145.1| hypothetical protein HPSAT_07215 [Helicobacter pylori Sat464] Length = 355 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 115/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTTVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|295675785|ref|YP_003604309.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] gi|295435628|gb|ADG14798.1| permease YjgP/YjgQ family protein [Burkholderia sp. CCGE1002] Length = 365 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 102/356 (28%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAASGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ Q + P + + + I + + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS-NPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESPSTHRVFFIEKMSPDQGHVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y D Q Sbjct: 181 GGKVNVVVSKNGHVETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGLP--------TMTLLRNPTNENLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA-ALIPVILTISLSILILLQ 357 + I + + ++ +++++ + G + ++ VI+ ++ + ++ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQAWIEQGKMSFGIGLVILHVIVLGIVAFIFWMR 347 >gi|78186598|ref|YP_374641.1| hypothetical protein Plut_0723 [Chlorobium luteolum DSM 273] gi|78166500|gb|ABB23598.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 442 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 1/164 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K + L M ++ + ++ L A + Sbjct: 1 MKIIDRYILKSLVGPFFLAFLTIMFVLILQFFANFADRFIGR-GIDFMSLIELLALQSAW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ F +L TSE+ + RA G+S+++L+ P V+ LL + N Sbjct: 60 MVGLAAPMAVLIGVVMAFGSLTTTSEMTVFRASGLSLYRLMLPVVIVGFLLSLLVERFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 + + L+ + + + + Sbjct: 120 VVQPQVKYKARSLMSDIAKAKPTFGITENAFSPLVDGYSILVQH 163 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 1/93 (1%) Query: 262 SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI 321 N R +++ + LI A + + +R I + + + + Sbjct: 338 MNQMLYNRYMAEYHKKYALAFACFVFVLIGAPLGV-LARRGGFGIGAVLSLLFFVLYWVL 396 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + ++ + G+L P A + ++ + + Sbjct: 397 MITGENMAEWGVLPPAVAIWMADVVIAVIGSTL 429 >gi|322834556|ref|YP_004214583.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] gi|321169757|gb|ADW75456.1| permease YjgP/YjgQ family protein [Rahnella sp. Y9602] Length = 364 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 124/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + K+ L +++ F L + + + + L VP + Sbjct: 2 IIIRYLVRETFKSQFAILFILLLIFFCQKLVRVLGAAVD-GDIPTNLVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ +V ++ +F + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTDSEITVMHACGLGKRSLVIAALVLALFTSVFAGVNAIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + K +++ + K N + Q N +F+G+ K ++++ Sbjct: 121 SPWSSKHQDEVLAEAKANPSMAAMVEGQFQQAQNGNAVLFVGSVKGKEFHNVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 +++ ++ + + ++ +Y + ++ + + Sbjct: 181 GNQRPSVVVADKGHMLQRADGSQQVMLDKGTRYEGTALLRDFRVTDFTDYLAVIG----- 235 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + + A + + + + + + M L+ +S+ R + Sbjct: 236 HQAVQLDPNQSDQMTMTQLWNSNEPEARAELNWRLTLIVSVFIMALLVVPLSVVNPRQGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + + + T ++S G G L P+ +L +L++++ Sbjct: 296 V-LSMLPAILLYLIFFLLQTSLRSNGAKGKLDPMLWMWGTNLLYFALALVL 345 >gi|188528269|ref|YP_001910956.1| hypothetical protein HPSH_07675 [Helicobacter pylori Shi470] gi|188144509|gb|ACD48926.1| hypothetical protein HPSH_07675 [Helicobacter pylori Shi470] gi|308062762|gb|ADO04650.1| hypothetical protein HPCU_07550 [Helicobacter pylori Cuz20] Length = 355 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 115/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALNTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|210135665|ref|YP_002302104.1| hypothetical protein HPP12_1476 [Helicobacter pylori P12] gi|210133633|gb|ACJ08624.1| hypothetical protein HPP12_1476 [Helicobacter pylori P12] Length = 355 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYITFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKL 351 >gi|15639868|ref|NP_219318.1| hypothetical protein TP0883 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026106|ref|YP_001933878.1| hypothetical protein TPASS_0883 [Treponema pallidum subsp. pallidum SS14] gi|3323200|gb|AAC26573.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018681|gb|ACD71299.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 365 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 95/342 (27%), Gaps = 3/342 (0%) Query: 13 YLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITL 72 +L L+ A +++ ID+ Q Y S + +P + P L Sbjct: 5 FLPIFFLVLVCASMILDAIDILVNLTQFIS-NGYRFSSLVKIWYVSIPHYVLLCCPLSVL 63 Query: 73 VVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGI 132 L +E + G+S + ++ P+ L I N + + Sbjct: 64 FAATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQSKKD 123 Query: 133 DLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIH 192 ++I + + + I + + K+I Sbjct: 124 EIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMKNSNGTIQKLIE 183 Query: 193 RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 A +K ++ + + + + ++ F S +I Sbjct: 184 AHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKGMSIQKI 243 Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 + + ++ H +FY PL + M ++ ++ F + + + + Sbjct: 244 KETLHTLKYASKPH-RELSIRFYKKFYFPLTMCIMLCLSF-LTGSFLKKRSLIMYIFCSV 301 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 Y + + P PV+ + L + Sbjct: 302 VLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYV 343 >gi|317010128|gb|ADU80708.1| hypothetical protein HPIN_07620 [Helicobacter pylori India7] Length = 355 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|217033870|ref|ZP_03439294.1| hypothetical protein HP9810_870g2 [Helicobacter pylori 98-10] gi|216943633|gb|EEC23078.1| hypothetical protein HP9810_870g2 [Helicobacter pylori 98-10] Length = 355 Score = 72.4 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 114/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMHQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|90419502|ref|ZP_01227412.1| possible permease [Aurantimonas manganoxydans SI85-9A1] gi|90336439|gb|EAS50180.1| possible permease [Aurantimonas manganoxydans SI85-9A1] Length = 392 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 114/356 (32%), Gaps = 8/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY FK L +++V+++ + + + S +A +P + Sbjct: 3 ILERYIFKRAFVYAASSLTSLVLIVWIVQALSRIDVVKTSASA-ASNIFWIALMLLPDLF 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++PF L+ I +LN SE + A G S + P V +L G+ +L+ N + Sbjct: 62 AGVLPFALLIGAIQALNSLNSDSERAVISAAGASQAVIARPIVALGLLGGLIMLLIGNVV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + I+ + + + + Sbjct: 122 GPASMSAFQNGIRSINADMITLFLKPGRF--EQVQDGIVISIGDVNGATVESLVIADTRD 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIP-IKMDGFQKFSE 242 R+ + + + L ++ + + + ++ Sbjct: 180 PASDLTYFAREAKIIDEDASSLLLLFDGQLHRRNTADNSVSVIQFQTYAFDLAALRPATD 239 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY---FLIVIPLMLVAMTLIAASVSLEFS 299 R+ + + + ++ + R + + L +A L A V+ + S Sbjct: 240 NSWVRASERSTAALIWPDPNDGLYQERPHSFTEELTDRMTNWLFAIAFVLWAIVVAGQPS 299 Query: 300 -RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + G+ G +L + S + G+ V + L+P+ + S+LI Sbjct: 300 TNRQGTGPAMTVGLCGGLVLKAAGFVTLSQIEQGVFWVVISYLLPLAAIVLNSVLI 355 >gi|317182703|dbj|BAJ60487.1| hypothetical protein HPF57_1413 [Helicobacter pylori F57] Length = 355 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTTVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNTTHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|91782195|ref|YP_557401.1| membrane protein, YjgP/YjgQ like [Burkholderia xenovorans LB400] gi|91686149|gb|ABE29349.1| membrane protein, YjgP/YjgQ like protein [Burkholderia xenovorans LB400] Length = 365 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 105/356 (29%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAASGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ Q + P + + + I + + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI-SNPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + ++ + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y D Q Sbjct: 181 NGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGT--------PTLTLLRNPTDDNLAEFAWRAGLPLIALNLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL-PVAAALIPVILTISLSILILLQ 357 + I + + ++ +++S+ + G + PV + VI+ ++ + L+ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLR 347 >gi|90423816|ref|YP_532186.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] gi|90105830|gb|ABD87867.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisB18] Length = 388 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 109/359 (30%), Gaps = 5/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G + Y F+ L + L ++++ + + +I L VP+ Sbjct: 1 MGSIDSYIFRTTLTSFAVILASLTGVIWITQALRGID-LMTSQGQTILTFLGLTGMAVPV 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P ++ L SE+++ A G+S +L+ PF+ S+++ I + Sbjct: 60 LVLVIAPIALMIAVAHTLNRLANDSEIIVMNAAGLSPLRLVRPFMFASVVVAILVGFISA 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A G + + + + Q+ + ++ D Sbjct: 120 YVAPEGLRRINRWDSEITADILANILQPGRFSQLETNLTIRVRERQPGGVLVGVFIDDRR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 ++ + I L + L+ ++ D M F + Sbjct: 180 DPNERISIIAD-HGTVLKNNDGSFLVLEDGTLQRFESGKRDPALVAFGRYAFDMSKFSRA 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFH--NYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + + + ++ + + + ++ P+ + + Sbjct: 239 RDVSYGIRERYLWELLWPEPDDALYARLPNQFRAEMHDRVLAPIYPFVFAALTFAFLGLP 298 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Q R G + + + S S A + + ++ S+ ++ + Sbjct: 299 RTTRQSRNFSMAGAIAAVFVVRLAGFACSIVASSTPAVAIAQYLLLAAALAGSLWVIAR 357 >gi|110807999|ref|YP_691519.1| hypothetical protein SFV_4232 [Shigella flexneri 5 str. 8401] gi|110617547|gb|ABF06214.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 345 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 109/331 (32%), Gaps = 7/331 (2%) Query: 24 AMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLN 83 +++ F L I + + + L VP + Q I+P + ++ L Sbjct: 1 MLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLY 59 Query: 84 RTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGD 143 SE+ + A G+S L+ ++ ++ I + + + +++ + K N Sbjct: 60 TESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPG 119 Query: 144 KQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYN 203 + Q +N +FI + ++ + + ++ L + + Sbjct: 120 MAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRD 179 Query: 204 DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSN 263 + ++ + ++ + + + Sbjct: 180 GSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMRTLW 234 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 RA + + I + + M L+ +S+ R + + + + + + I T Sbjct: 235 NTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQT 293 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILI 354 +KS G G L P ++ ++L+I++ Sbjct: 294 SLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 324 >gi|317178203|dbj|BAJ55992.1| hypothetical protein HPF16_1395 [Helicobacter pylori F16] Length = 355 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|187922984|ref|YP_001894626.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] gi|187714178|gb|ACD15402.1| permease YjgP/YjgQ family protein [Burkholderia phytofirmans PsJN] Length = 365 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 106/356 (29%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAASGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ Q + P + + + I + + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI-SNPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + ++ + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSADQARVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y D Q Sbjct: 181 NGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 ++ + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPSTTGT--------PTLTLLRNPTNDNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL-PVAAALIPVILTISLSILILLQ 357 + I + + ++ +++S+ + G + PV + VI+ ++ + L+ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLR 347 >gi|313668051|ref|YP_004048335.1| hypothetical protein NLA_7130 [Neisseria lactamica ST-640] gi|313005513|emb|CBN86949.1| conserved hypothetical integral membrane protein [Neisseria lactamica 020-06] Length = 392 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/352 (9%), Positives = 106/352 (30%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L + + Sbjct: 23 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWIIGMT 81 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 82 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 141 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 142 MPWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVY-FVETFDTESGIMKNLFLRE 200 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + N+ + ++ + K + + + Sbjct: 201 QDKNGNDNIIFAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPK 260 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + L V L+L + + + + Sbjct: 261 LIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVSVLLLCLLAVPLSYFNPR----GG 316 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ ++G + L I+ ++++++L Sbjct: 317 HTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILL 368 >gi|331674536|ref|ZP_08375296.1| putative permease [Escherichia coli TA280] gi|331068630|gb|EGI40025.1| putative permease [Escherichia coli TA280] Length = 356 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 98/345 (28%), Gaps = 12/345 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + ++ + ++ + ++ +G + + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVPV 334 >gi|239815707|ref|YP_002944617.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] gi|239802284|gb|ACS19351.1| permease YjgP/YjgQ family protein [Variovorax paradoxus S110] Length = 379 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 113/348 (32%), Gaps = 7/348 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 K ++ L+ + +V + L + + + S ++ A V + I+ Sbjct: 7 LRKELSRSFGATLVVLVTIVMTMMLIRTLG-LASKGSVNPSEVFLVMAYTVLGYMPTILS 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + + + R SE+VI + G + + P + + + ++ Sbjct: 66 LSLFIAIVGTLSRMYRDSEMVIWFSSGRGLADFVEPLFRFAWPVLVLIAVMALLGWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 I + Q++ D ++ + + S + FI ++ + Sbjct: 126 SQTIGMRAQYEGRSDIERVTPGEFRESSGRMRVFFIDKDTPDGATATNVFIWAVERGLQI 185 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 R + N + L + +P + + + + + + S Sbjct: 186 TTSARSGRIENVGNNRFLMLSNGQRLERPLLPTAGLKIS-----EFETYGTRAGGTSDFS 240 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + + + + + + I + L + L+A +VS R + + Sbjct: 241 ADNTPARAKPTLQLLREPGDASHGELAWRIGMLLAAINFVLLALTVSSVNPRVGRSG-NL 299 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + +F+ + Y ++ + +S+ SG + L+ + + + LL Sbjct: 300 LFALFAFVVYYNMLNLGQSWISSGRFSMGSFMLLLHGGVLLIGVAWLL 347 >gi|323144743|ref|ZP_08079320.1| permease, YjgP/YjgQ family [Succinatimonas hippei YIT 12066] gi|322415494|gb|EFY06251.1| permease, YjgP/YjgQ family [Succinatimonas hippei YIT 12066] Length = 336 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 99/323 (30%), Gaps = 14/323 (4%) Query: 33 LNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISR 92 + + ++ + + LAA VP I ++P + ++ + SE+V+ R Sbjct: 1 MIRLISRAA-VGTVPVDIITNLAAYAVPEIAMIMLPLTLFLACLITLGRICSDSEMVVMR 59 Query: 93 AIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 +IG S ++ ++ + I T + L++Q ++N + + Sbjct: 60 SIGFSPANVMTIAMILAFFTSIVTAFNCIYLVPWASNAKETLMKQTENNPQFLPIESGKF 119 Query: 153 MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK----NKIIHRKDADLAIIYNDKVKL 208 + I +K E +I F + I ++L Sbjct: 120 SSMGGYNIYIENVEEKSDGEKNIANVFVMESPFANVGNSMTIADNGYLVHDENGVLWLEL 179 Query: 209 KKVVEYQYGRIPIDKNSTTLNIPIKM-DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 K ++ N + G ++ S S + + ++ K I Sbjct: 180 DKGSRFEVLTKDGTSNKAIFDKFRAPVAGSNSELQEDDSISSRDTFELLNSGEKRGIVEA 239 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 + + + +T IA +S+ R + + I Y + ++ Sbjct: 240 -------QWRLSPIFAVFILTFIAIPLSMVNPRQGRFA-RLMPAILIYASYYMFLLSCRN 291 Query: 328 FGKSGILLPVAAALIPVILTISL 350 SG I ++ + Sbjct: 292 MINSGSWPLYPGLFIVPVVFLFF 314 >gi|33593405|ref|NP_881049.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|33572761|emb|CAE42691.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|332382814|gb|AEE67661.1| putative integral membrane protein [Bordetella pertussis CS] Length = 370 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 107/318 (33%), Gaps = 5/318 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + LAA + I+ + + R SE+V+ A G+S+ L Sbjct: 42 GSIGADVVLGLAAFSTITALPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWLR 101 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 P ++ + + + + + + + ++ D K + + + F Sbjct: 102 PVARVAVPIAMLVAALTLVASPWAYRQIGEYRELFEQRSDLSKVTAGQFAESGRGDRVFF 161 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + P + + F + ++ +A + N L ++Y P Sbjct: 162 A-EDPVRPGDELGAVFARSIDPEWLSVLTASNARSETLPNGDRFLVLGEGHRYDLKPGTP 220 Query: 224 NSTTLNIPIK---MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 +N ++ +R+ E K + + + + +Q + + + Sbjct: 221 EIRLVNFDQYGVRLESKAGEDPMAEARAAAERSSKARSTMQLVQDNTDSSWSQIMWRVAM 280 Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 PL + + L+A + R + ++ G+ G + +I + +++ SG + Sbjct: 281 PLAALNLALLAIPLGAVNPRLGRSGDLLIAGL-VGLLYMNMINLSRAWISSGKISFSIGV 339 Query: 341 LIPVILTISLSILILLQK 358 + L+ +L+++ Sbjct: 340 WAVHAVVALLAAYLLMRR 357 >gi|255535566|ref|YP_003095937.1| hypothetical protein FIC_01427 [Flavobacteriaceae bacterium 3519-10] gi|255341762|gb|ACU07875.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 484 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 1/255 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y K +L L+ + V + Q S L A Sbjct: 1 MIKKLDGYVIKSFLGPFLFIFSVLFFIFVVNIIWIQLAQFTGK-GLSYWEILKLLAYLSV 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++Q ++P L+ +I+ F + EL +A GIS+ +++ P V SI L F L Sbjct: 60 KVVQLVLPLTILLSSIMTFGDFGERYELAAMKAAGISLTRIMMPLFVVSIALSFFLFLFS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N + ++ +++ ++Q F EN Sbjct: 120 NNVIPDFQRKAKNMLYNIAATKPALNFSPGQFIQQIPGYSVKFDEITGENGENLTGVFIH 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + +N+ + + +++ LK V+ + N + D KF Sbjct: 180 KMANSYENQQSIVAEKGKFVQADNRNYLKLVLYNGHIFEENIGNVDYNQRIKQPDQAIKF 239 Query: 241 SEQFASRSFYEIIKK 255 + + EII K Sbjct: 240 DTLVSHFNISEIINK 254 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 1/109 (0%) Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 E+ + K +N R + + + LI +S+ R + V Sbjct: 343 LKELNEGKKPQIKDLHSYNSRIIMYQQRIFAYSMTCLIFFLIGSSLG-SIIRKGGLGLPV 401 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I + Y + +++ +G + P A+ +P ++ + + Sbjct: 402 VIAIMVFIIFYILNLTVENMAWAGEMNPYLASWLPNMVLFPFGAWLTYK 450 >gi|153877760|ref|ZP_02004356.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS] gi|152065776|gb|EDN65644.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS] Length = 215 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/214 (10%), Positives = 62/214 (28%), Gaps = 1/214 (0%) Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 + I + + + + + + A Sbjct: 1 MVFSTRYGFWARDGHDFINVRTIFPDGGFGTISLYEFDDEQRLQALTYARTAYYQEGKWL 60 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI 264 ++K + + T + +K + + S + + + ++ Sbjct: 61 LKGVEKNILSANQVTRQFLENVTWDAILKPELIKMVVISPYKLSSLGLYNYIEYRQQNGQ 120 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + E + + PL+ V M L+A R+ + G G + + Sbjct: 121 R-TAQYELALWTRLSYPLVGVTMILLAIPFVFGSLRTVSIGQRILVGALLGVGFHMLNQA 179 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + G L P +A +P + + L+I+++ Sbjct: 180 VSNMGLVYGLHPAISAFLPPLAFLMLAIVMMRHL 213 >gi|218296306|ref|ZP_03497062.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] gi|218243378|gb|EED09908.1| permease YjgP/YjgQ family protein [Thermus aquaticus Y51MC23] Length = 336 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 94/335 (28%), Gaps = 19/335 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY K L + M L DL + + +L R+P + Sbjct: 2 LGRYVLKEVLLPYGVGVFLFMAL-LTFDLLSSLSGVFLSRGAGAEAILLLVLYRLPWTLS 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V L R SEL + A G+ LL P ++ S+L+ + + + + Sbjct: 61 LALPLGLVFAILVGLSRLIRHSELKAAYAAGVPPLALLKPLLLLSLLVALVNLYNLAEVR 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + + + Q + + + Sbjct: 121 PRALEAYDRALARLLYGEGGPSGVLRRQVYALEGQGVYYAEEVVPEVGQNRLYGLRVVDE 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + D L++ + I + + + Sbjct: 181 KGRIYSAKEGVWDREGWQFLGYVLEEGKLKPFQGI------LPFPALFRPKESLGSKDPY 234 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S + E+ ++ + + + L + AA++ L + Sbjct: 235 DSSTLEELWQRARVEPAA--------RFALHRRLADALGGFFLGFAAAALGLSLREAAWA 286 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 + V + F Y + T+ + + P+ A Sbjct: 287 FLGV---VLLIFGYYVLWTLSAQLAR-YDVSPLLA 317 >gi|296162276|ref|ZP_06845070.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] gi|295887430|gb|EFG67254.1| permease YjgP/YjgQ family protein [Burkholderia sp. Ch1-1] Length = 365 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 105/356 (29%), Gaps = 12/356 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + LV + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVG-FAASGEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V + SE+V+ + G+S+ Q + P + + + I + + Sbjct: 61 AIMLVATLFVSILFVLTRWYKDSEMVVWLSSGVSLTQFIKPIGIFATPIIILIMFFVFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI-SNPQQDIFIGAKKILPENHIWEDFTSI 182 + + +++ + + + ++ + ++ Sbjct: 121 WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESATSHRVFFIEKMSPDQARVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + V L+ Y D Q Sbjct: 181 NGKVNVVVSKTGHTETRKNGDRFVVLENGRRYDGQPGQPDFRIMEFERYGVKIQSQPVVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + +F + +PL+ + + L+A ++ + R + Sbjct: 241 TPTTTGT--------PTLTLLRNPTNDNLAEFAWRAGLPLIALNLMLLAIPLAHQNPRRS 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL-PVAAALIPVILTISLSILILLQ 357 + I + + ++ +++S+ + G + PV + VI+ ++ + L+ Sbjct: 293 RT-INLVMAVLIYLTYSNLLNVVQSWIEQGKMSFPVGLVGLHVIVAAIVAFIFWLR 347 >gi|15646107|ref|NP_208289.1| hypothetical protein HP1498 [Helicobacter pylori 26695] gi|2314682|gb|AAD08544.1| predicted coding region HP1498 [Helicobacter pylori 26695] Length = 355 Score = 72.0 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAIYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKL 351 >gi|315585885|gb|ADU40266.1| conserved hypothetical protein [Helicobacter pylori 35A] Length = 355 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 116/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ + V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTVVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNATHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|319405494|emb|CBI79113.1| conserved membrane hypothetical protein [Bartonella sp. AR 15-3] Length = 382 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 107/361 (29%), Gaps = 11/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL Y K +LGA+ + + + + N + ++ +P Sbjct: 1 MRILELYILKRIFILFSAVMLGAIGISWTVQILARIN-FLTTSGQTFLTILYFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +IPF ++ ++ +N+ +EL + A GIS + P ++ +IL + + N Sbjct: 60 VTSLVIPFALVIAITIILSTMNQDTELAVISASGISKNIVWKPILLLAILASFTSFSITN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA ++ + + Q I IG + Sbjct: 120 FIAPHARLNMRQMLANAHSDLISLFIREGSF-QELAKNLYIEIGERNANGTIGRLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K A + + + L + + + + +F Sbjct: 179 RDHQLGLFYYAAKGAIVNNKKGNFLILNDGEIERIDYKNDNVSIIKFSSYTF--SLSEFI 236 Query: 242 EQFASRSFYEIIKKMSFS------NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + + Y + +S+ + ++ +F+ L + LIA + Sbjct: 237 PNKKTPNIYPKDRPLSYLSNPSPNDPHYQRKPFQYRAEFHRRFTECLYPIVFALIAIVIV 296 Query: 296 LEF-SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S I ++Y + ++ +IP+ + ++ Sbjct: 297 GNARSYRQAHIFETFSTITFSLLIYWLGYFFAQKAENNPSYIPLLYIIPIGICSLTFFML 356 Query: 355 L 355 + Sbjct: 357 I 357 >gi|78188415|ref|YP_378753.1| hypothetical protein Cag_0437 [Chlorobium chlorochromatii CaD3] gi|78170614|gb|ABB27710.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 443 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 57/149 (38%), Gaps = 1/149 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K + + + + L+ + + + + L A + ++ Sbjct: 3 ILDRYILKKQIAPFFFAFITIVALLQLQFFSTFAERFIGK-GITFVAIVELLALQSAWMV 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P LV ++ F L TSE+ + RA GIS+++++ P +V S+LL N + Sbjct: 62 SFALPMAVLVAVVMSFGTLTTTSEMTVCRASGISLYRVMVPVIVVSLLLSFTVERFNNVL 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 L+ + + + Sbjct: 122 LPQANYQAKSLMAEIARSKPAFGLTEQAF 150 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 35/92 (38%), Gaps = 1/92 (1%) Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 R ++ + L V L+ A + + +R + A + + + ++ + Sbjct: 344 YNRYMAAYHKKYSLSLACVVFVLVGAPLGV-LARRGGFGVGAAISLLFFVLYWMLMISGE 402 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + G+L P+ A + + + + ++ + Sbjct: 403 KMAERGVLDPMIAMWMADGVMALIGVGLVTKL 434 >gi|217031844|ref|ZP_03437347.1| hypothetical protein HPB128_199g52 [Helicobacter pylori B128] gi|298735532|ref|YP_003728053.1| hypothetical protein HPB8_32 [Helicobacter pylori B8] gi|216946496|gb|EEC25098.1| hypothetical protein HPB128_199g52 [Helicobacter pylori B128] gi|298354717|emb|CBI65589.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 355 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 114/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDEINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L +SLS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLSLSLWYFKKL 351 >gi|82523966|emb|CAI78777.1| predicted permease YjgP/YjgQ family [uncultured epsilon proteobacterium] Length = 356 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 111/348 (31%), Gaps = 6/348 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 ++Y +Y+K L L+ M+ + D E + N + + I Sbjct: 4 FKYISFHYIKYFLIILIALMLFLVGFDYMENAGDLSSSANL----VLIYLVYKAFFAIDM 59 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P + + L R++ LV ++G S +L PFVV S + + + + + Sbjct: 60 LLPLSLVFAMVSTKIFLIRSNALVSFYSLGYSRVDVLRPFVVVSTSIIVIFISLHALPSF 119 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTSITI 184 S + I++ + + + + ++ + + + Sbjct: 120 SRADEYSNNIRKNAEYLSPTRDLFFTYKDQYVYFSKMLPLQERAEGIRVFSVINNSLQEV 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 ++R D + K + G + + + E Sbjct: 180 LVAKSAVYRDDYWHIKQADIIRKPIDLSFESSGIRVTSVEDMKILEGFRPKILDQVYEGK 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + + I + F K+ + Y + V P + + +I R Sbjct: 240 VNFTITDAIDAI-FLLKNQNISVSTIKGALYKIFVYPFFVPCLVIIIFFFVPISPRFLNV 298 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + +++ I+ ++ + + + P+++ +S+ Sbjct: 299 SLFSFGAILATLLVWGILFMLIELSNNKTIPSEIGVVAPIVILFLISM 346 >gi|323978945|gb|EGB74025.1| permease YjgP/YjgQ family protein [Escherichia coli TW10509] Length = 356 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 98/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSVQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|299065988|emb|CBJ37169.1| putative permease, predicted YjgP/YjgQ family [Ralstonia solanacearum CMR15] Length = 372 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/344 (11%), Positives = 104/344 (30%), Gaps = 13/344 (3%) Query: 15 KTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVV 74 LL M+ VI + M S + +L + ++ + Sbjct: 16 GAVFLVLLTFMLTTLVIRILG----MAANGEASPNDVLLLIGLAALGYLAILLCATLFIS 71 Query: 75 NIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDL 134 ++V + SE+V+ G+S+ + P + S+ + L+ + Sbjct: 72 VLLVLTRWYKDSEMVVWFTAGLSLTDFIRPVLRFSLPFVVLVGLLALFGWPWANQQSALF 131 Query: 135 IQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSITIDKKNKIIHR 193 +++ +++ ++ +F G + + + Sbjct: 132 RDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDAGMKHARNLFVANAEQDKIGVALAKT 191 Query: 194 KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEII 253 + + V L K Y+ +D D + ++ + Sbjct: 192 GEFKAGPNGDRYVVLDKGRRYEGTPGQLDYRIVEF------DRYGVKVANKPPQADANLP 245 Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 K + + + + I +PL+ + LIA ++ R + ++ + Sbjct: 246 TKSRPTTELLSNPTPENLGELVWRIGLPLLALNFVLIAIPLAYVNPRLGRYTPMIF-AVL 304 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ + +++ G + + A P+ L + +L + Sbjct: 305 IYLTYSNLLNLSQAWVAQGKMSAMLA-WWPIHLAAFVCAALLFR 347 >gi|116330556|ref|YP_800274.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124245|gb|ABJ75516.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 606 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 52/188 (27%), Gaps = 1/188 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY L L L ++ V+ L ++ R + + Sbjct: 106 ILNRYILGEILSPFLVALAFFTMVYMVLALQKMIGLFVGK-GVDPLRLLDYFGYLLANTL 164 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L+ I+ L+ SE+ R+ G+S ++ F+ ++ + + + Sbjct: 165 PMTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALVVAYLNFYL 224 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + Sbjct: 225 SPENTRKMNEFNKWVLAYNPLLAITPGQFSGDKTQDLFEKRARTMYTDGMNSDTGQLKGV 284 Query: 184 IDKKNKII 191 ++ +I Sbjct: 285 QIREWEIF 292 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 ++ + + + I +P+ + I+ + L RS + + + Sbjct: 460 QLMALMQQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGK-GMSFTLAVVF 518 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + +T T+ + + + IL LSI I++++ D Sbjct: 519 LMIYFTFFTLGSTISYNDKVPDWIGPWSANILIALLSINIMIKRTD 564 >gi|88803032|ref|ZP_01118559.1| putative permease [Polaribacter irgensii 23-P] gi|88781890|gb|EAR13068.1| putative permease [Polaribacter irgensii 23-P] Length = 482 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 74/273 (27%), Gaps = 7/273 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L L L + ++ + L + + S S Sbjct: 1 MKILDKYILKTFLGPFLATFLIVLFVLVMQLLWQTFENIAGK-GISFSFILKFLYYTSLS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ Q +P L+ +I+ +L E +++ GIS+ +L+ P + ++LL L +N Sbjct: 60 IVPQAMPIAVLLSSIMALGSLGENYEFAAAKSSGISLQRLVRPLIFLTLLLSGINFLFLN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I +L K + K + ++ Sbjct: 120 NIFPYAILKQQNLYYNIKKKKPALALIPGSFNSDLPG------YQIKFDEKYGEEKNLLK 173 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + + + Sbjct: 174 NVLIYDLSSSKGNQKIITAKRGKIISEEGSRYMTFILYDGYYYEDHTKTTRSYSKKKNMP 233 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 A+ YE +S R + + Sbjct: 234 ASQATFKEYEFNIDISDLVGDGALDEERFKNSY 266 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 1/88 (1%) Query: 270 AETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG 329 ++++Y I + + + I A + R + + I + T+ K+ Sbjct: 366 FDSEYYGRIALSFSCLILFFIGAPLG-SIIRKGGFGLPMILAIAIYVTYFFGNTMGKNLA 424 Query: 330 KSGILLPVAAALIPVILTISLSILILLQ 357 + + V + I ++ I I + + Sbjct: 425 EESSISAVLGSWISAMVMIPFGIFLTRR 452 >gi|94311740|ref|YP_584950.1| permease YjgP/YjgQ [Cupriavidus metallidurans CH34] gi|93355592|gb|ABF09681.1| predicted permease [Cupriavidus metallidurans CH34] Length = 372 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 31/354 (8%), Positives = 109/354 (30%), Gaps = 15/354 (4%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + T L + + + I S + +L + ++ Sbjct: 7 LRRELAYTAGAVFLVMLTFMLTSLVIRILGMAAN-GKASPNDVLMLIGLATIGYLSILLS 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++V + SE+V+ + G+S+ L+ P + + + +L+ Sbjct: 66 ATLFISTLIVLTRWYKDSEMVVWFSSGVSLRDLIKPVLQFAAPFFVMALLLGLFAWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + +++ G +++ +N + + I + + + Sbjct: 126 QQSALFRDRFEQRGVLSMIASGRFIEPANGNYVL--FIEGIDADMKHARNVFVANAESGK 183 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 + + +L + + + + + ++ D + + + Sbjct: 184 IGVALAHQGQFETMPNGDRLVVMEHGRRYAGIPGQLNYRI---VEFDKYAVKVDNKPQDA 240 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 ++ K + + + I +P++ +IA ++ R + +V Sbjct: 241 AADLPTKSRDTIDLIRDPTRENLGELLWRISLPILAFNFVMIAIPLAYVNPRLGRYTPLV 300 Query: 309 AYGIFSGFMLYT----IITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++Y +I + +++ +SG + A + ++++ + Sbjct: 301 F-----AVLIYLTYSNLINLAQAWVRSGAMSFWMAIWPIHLAVFLCALVMFRYR 349 >gi|300931864|ref|ZP_07147161.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300460287|gb|EFK23780.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 353 Score = 71.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 92/343 (26%), Gaps = 13/343 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + D V L Y D N Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLPLDQSPNV 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +K + + + L + M L+A S+S R Sbjct: 240 K-----------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQ 288 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 289 GRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 330 >gi|326562956|gb|EGE13238.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 267 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 80/268 (29%), Gaps = 16/268 (5%) Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ +++ ++ V + + + + + W + Sbjct: 1 WAMLPAVIFVAISLGVNQFVLPTANQYATAIRADTIYDKLITID--GYWSVNHDGDSQDV 58 Query: 164 IGAKKILPENHIWEDFTSITIDKK-------------NKIIHRKDADLAIIYNDKVKLKK 210 + E + E D + + +A A + + Sbjct: 59 VYISYADNEGGLGEVKRYQLKDGQLIAALKAKSGVYLPQSDDVMNAQKARYTWQLSGIDE 118 Query: 211 VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + L +PI +++ S + R Sbjct: 119 IGIGTSQVQQAHSEGKILTLPIAPTDVYLLTKEPEDLSLSSLYAHRQLMAHQGTRSL-RH 177 Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 E F+ ++ P ++++ L+A+S RS + V + +G + + + Sbjct: 178 ELAFWQKLLSPFAVLSLVLVASSFVFGSLRSQGLGLRVVLALLTGLLFSYLTDLTGFVAL 237 Query: 331 SGILLPVAAALIPVILTISLSILILLQK 358 + L P+ AL+P++L+ + +L +K Sbjct: 238 ATGLSPLLMALVPIVLSAMAGMYLLNRK 265 >gi|261838772|gb|ACX98538.1| hypothetical protein KHP_1349 [Helicobacter pylori 51] Length = 355 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTIIYEMPLSFELGANALNTTHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|46198338|ref|YP_004005.1| hypothetical protein TTC0030 [Thermus thermophilus HB27] gi|46195960|gb|AAS80378.1| hypothetical membrane spanning protein [Thermus thermophilus HB27] Length = 336 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 106/355 (29%), Gaps = 22/355 (6%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L + L DL + + +L R+P + Sbjct: 2 LGRYVLREVLVPYLVGVFLFAAL-LTFDLLSSLSGVLLSRGVGAREVGLLVLYRLPWTLS 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V L R SEL + A G+ LL P V+ ++ + + +L + + Sbjct: 61 LALPLGLVFAVLVGLAGLIRRSELKAAYAAGVPPLALLRPLVLLALAVSLLNLLNLAELR 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ L+ + + + F PE + + Sbjct: 121 PRSQEAYDRLLGRILYGEGGASGVLRRQVYAPPGLGVYFAEEVYPEPEGNRLRGVRVVDE 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R + +++++ K + + + + + + Sbjct: 181 RG------RVYSAEEGLWDEEGWRLKGYVVEGEEVRPFEGVLPFPARFRPKESLGSRDPY 234 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S E+ + ++ + R L L+ + + S + Sbjct: 235 DSTPLEELWARAQVEPEARFAFHRR------------LADALGGLVLGAAAAALGLSLRE 282 Query: 305 RIIVAYG-IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 G + F Y + T+ + + P+ A +P + +L+ + + Sbjct: 283 AAWAFLGVVLLIFGYYVLWTLAAQLAR-YDVSPLLA-YLPDLFYGALAGALAWRL 335 >gi|90021020|ref|YP_526847.1| queuine tRNA-ribosyltransferase [Saccharophagus degradans 2-40] gi|89950620|gb|ABD80635.1| permease YjgP/YjgQ [Saccharophagus degradans 2-40] Length = 360 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 32/320 (10%), Positives = 97/320 (30%), Gaps = 16/320 (5%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 L R+P ++ I+P + ++ + L SE+ + A G+S +L+ Sbjct: 29 GELDGGVLLTLMTYRLPAYLELILPLGLFLGILMAYGRLYLESEMTVLHACGLSQGKLIG 88 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 +V + ++ + + G + L+ + ++ D + + ++ Sbjct: 89 FTMVSTFVVACVVGVFSLYLGPEGVRASEKLLAEQRNRTDFETLKPARFHELDGGSGIS- 147 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRK--------DADLAIIYNDKVKLKKVVEYQ 215 A+ I + + + + A + LK Y Sbjct: 148 -YAESISDDKQKLQKVFMAKLAPDSVDDDLTVLTAESGETVVDAETGVKYLLLKNGRRYV 206 Query: 216 YGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY 275 ++ ++ + + + + + A Sbjct: 207 GRPGEVNYKVVEFKTFSQILPEPDYEAVKPKKETDGL-----STAQLFERDTLAARAALQ 261 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + + +P++++ + L+A +S R + ++ I + + + G Sbjct: 262 WRLSLPVLVMVVGLLAVPLSRTQPRQGRYAKMLP-AILLYIFYLVCVNGARGAIEDGSAP 320 Query: 336 PVAAALIPVILTISLSILIL 355 + + L++L++ Sbjct: 321 FIGLLWVVHGAFFCLALLLI 340 >gi|116327644|ref|YP_797364.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120388|gb|ABJ78431.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 606 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 52/188 (27%), Gaps = 1/188 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY L L L ++ V+ L ++ R + + Sbjct: 106 ILNRYILGEILSPFLVALAFFTMVYMVLALQKMIGLFVGK-GVDPLRLLDYFGYLLANTL 164 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L+ I+ L+ SE+ R+ G+S ++ F+ ++ + + + Sbjct: 165 PMTIPMACLMSGIMAAGRLSGDSEITAIRSAGVSFPRIYINFLAFGFVMALVVAYLNFYL 224 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + + + + Sbjct: 225 SPENTRKMNEFNKWVLAYNPLLAITPGQFSGDKTQDLFEKRARTMYTDGMNSDTGQLKGV 284 Query: 184 IDKKNKII 191 ++ +I Sbjct: 285 QIREWEIF 292 Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 ++ + + + I +P+ + I+ + L RS + + + Sbjct: 460 QLMALMQQGKKVLTDFNVEIHRRIAMPISCLIFFFISFPLGLVVKRSGK-GMSFTLAVVF 518 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + +T T+ + + + IL LSI I++++ D Sbjct: 519 LMIYFTFFTLGSTISYNDKVPDWIGPWSANILIALLSINIMIKRTD 564 >gi|317179675|dbj|BAJ57463.1| hypothetical protein HPF30_1366 [Helicobacter pylori F30] Length = 355 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 113/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTIIYEMPLSFELGANALNATHLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P L ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKL 351 >gi|121591520|ref|ZP_01678785.1| inner membrane protein YjgP [Vibrio cholerae 2740-80] gi|121546628|gb|EAX56818.1| inner membrane protein YjgP [Vibrio cholerae 2740-80] Length = 277 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 72/233 (30%), Gaps = 3/233 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 ++ D+ + + + L Y+ +D T + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGL 233 >gi|13236182|gb|AAK16078.1|AF288080_5 YacA [Photorhabdus luminescens] Length = 146 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 1/134 (0%) Query: 225 STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML 284 S + + + S + + + + ++ + + I P + Sbjct: 13 SADWKTRLTPQKLGVVALDPDALSISGLYQYIKYLKQTEQESGX-YQLNMWKKIFAPFSV 71 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 M L+A S R+ + + GI GF+ Y + I + V AAL+P Sbjct: 72 AVMMLMALSFIFGPLRTVLMGVRIITGISFGFLFYVLNEIFGPLSLVYSMPAVLAALLPS 131 Query: 345 ILTISLSILILLQK 358 L +++SI +LL++ Sbjct: 132 FLFLTVSIYLLLKR 145 >gi|307312964|ref|ZP_07592592.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|306907132|gb|EFN37639.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315063568|gb|ADT77895.1| conserved inner membrane protein [Escherichia coli W] Length = 359 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 115/344 (33%), Gaps = 7/344 (2%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + LK+ L L +++ F L I + + + L VP + Q I+P Sbjct: 2 RETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 + ++ L SE+ + A G+S L+ ++ ++ I + + + Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH 120 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 +++ + K N + Q +N +FI + ++ + + + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV 180 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 + L + + + ++ + ++ + + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIG-----HQAVALD 235 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 RA + + I + + M L+ +S+ R + + + Sbjct: 236 PNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRV-LSMLP 294 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + I T +KS G G L P ++ ++L+I++ Sbjct: 295 AMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 338 >gi|114799726|ref|YP_760969.1| putative permease [Hyphomonas neptunium ATCC 15444] gi|114739900|gb|ABI78025.1| putative permease [Hyphomonas neptunium ATCC 15444] Length = 380 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 43/360 (11%), Positives = 119/360 (33%), Gaps = 13/360 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I + + L+ L + +++ + + + E S + P Sbjct: 1 MTKI-QLHLLRQVLQAVLIIVGSLVMVALLAQGLSRTDVILENR-QSAITYFYIVMLGSP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +I ++P V + +++ SE+V+++A G++ WQ+ +P + +++ + + V Sbjct: 59 QVIALLLPLALFVAGVWSLNRIHKDSEIVVAQAAGMTRWQVASPVLRLAMVCLVVHLGVN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ + + + + + + + D T Sbjct: 119 LWVQPMSQRAMREAVAEARADLAAALFRAGQFTSNGERLTFYARDQVGGELRGVLISDMT 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDG 236 I+ R A +++ + L+ + Q + + ++ M Sbjct: 179 DPEFPMD--ILARSAALVSVDGQPTLLLRDALSQQLDENQQLSVLEFDQYMFDLSDFMKE 236 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA--ASV 294 + + + + +E+I + N + + P++ + M L+A A + Sbjct: 237 DSELVLKASDKFLHELI-FLDRKNYFENKEADSFLAEANARLTSPMLNIVMALLAIFAVL 295 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 +FSR + G + ++ + + A + IL + I Sbjct: 296 GGDFSRQG-YAKRIGLATG-GAIFVLVLHLALQSAAADDPALNIALWVVPILAGIILGWI 353 >gi|319404056|emb|CBI77644.1| putative permease, YjgP/YjgQ family [Bartonella rochalimae ATCC BAA-1498] Length = 382 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 107/361 (29%), Gaps = 11/361 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I Y K LLGA+ + + + + N + ++ +P Sbjct: 1 MRIFELYILKRIFILFSAVLLGAVGISWTVQILARVN-FLTTNGQTFLTILYFSSLLIPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+PF +V + +N+ SEL + A GIS + P ++ +IL + + N Sbjct: 60 VTSLIMPFALVVAITTILLTMNQDSELAVISASGISKNIVWKPILLLAILASFTSFSITN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA ++ + + Q I IG + Sbjct: 120 FIAPHARLNMRQILASSHSDLISLFIREGSF-QELTKNLYIEIGERNANGTIGRLFIADQ 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K A + + L + + + + +F Sbjct: 179 RDPQLGLFYYATKGAIVNNKKGKFLILNDGEIERIDYKNDNVSIIKFSSHTF--SLSEFI 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNY------RAETQFYFLIVIPLMLVAMTLIAASVS 295 + + Y + +S+ N + + + + L + LIA +++ Sbjct: 237 PNKKTPNIYPKDRPLSYLFNPNPSDPHYQRKPLQYRAELHRRFTECLYPIVFALIAIAIA 296 Query: 296 L-EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 S I ++Y + ++ +IP+ +++ ++ Sbjct: 297 GDAHSYRQARISATFSTITFSLLIYWLGYFFARKTENNPSYIPLLYVIPIGISLLTFFML 356 Query: 355 L 355 L Sbjct: 357 L 357 >gi|83952306|ref|ZP_00961038.1| Predicted permease [Roseovarius nubinhibens ISM] gi|83837312|gb|EAP76609.1| Predicted permease [Roseovarius nubinhibens ISM] Length = 372 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 116/357 (32%), Gaps = 15/357 (4%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 ++ +F L + + ++ + +++ S L A +P +I ++P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLISDGQSSF-VFLELTALTLPGVIAVVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + V L+ SEL + +A G S W+L P ++ +++ L+ + + + Sbjct: 60 IAGFAGAVYVTNRLSTESELTVMQATGYSPWRLARPVLIYGVIVAAMMSLLTHVLVPTSL 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + N + ++ P + ++I PE + + F S D + Sbjct: 120 HRLETRKAEVSRNVTAKLLTEGEFLH---PAGGVTFYIREITPEGELRDVFLSDRRDIQA 176 Query: 189 KIIHRKDADLAIIYNDKVKLKKV-------VEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +I+ + KL V + +I + Sbjct: 177 PVIYTSKMAYLVQEGGGTKLVMVNGLAQTAQTKGNRLFTTFFTDFSYDISGLISDDVINL 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSLEFS 299 S ++ + + + + + + LM V LI + + +S Sbjct: 237 THARYASTPALMTRAAEIAQISGVSEGVVTLELHNRFAQALMCVVAALIGFATLLLGTYS 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R R I+ + + T+ + L P+ A P + L +L+L Sbjct: 297 RFGVWRQILLAFLLLVAVKLVEGTLTSPILSAPELWPL--AYAPPAMGFVLVVLLLY 351 >gi|110643219|ref|YP_670949.1| putative permease [Escherichia coli 536] gi|170683865|ref|YP_001745245.1| YjgP/YjgQ permease [Escherichia coli SMS-3-5] gi|194436786|ref|ZP_03068886.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218706607|ref|YP_002414126.1| hypothetical protein ECUMN_3464 [Escherichia coli UMN026] gi|256024434|ref|ZP_05438299.1| hypothetical protein E4_13749 [Escherichia sp. 4_1_40B] gi|293406597|ref|ZP_06650523.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382336|ref|ZP_06991933.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300900317|ref|ZP_07118496.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312968688|ref|ZP_07782897.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331684626|ref|ZP_08385218.1| putative permease [Escherichia coli H299] gi|110344811|gb|ABG71048.1| putative permease [Escherichia coli 536] gi|170521583|gb|ACB19761.1| putative permease, YjgP/YjgQ family [Escherichia coli SMS-3-5] gi|194424268|gb|EDX40255.1| putative permease, YjgP/YjgQ family [Escherichia coli 101-1] gi|218433704|emb|CAR14621.1| conserved hypothetical protein; putative membrane protein [Escherichia coli UMN026] gi|291426603|gb|EFE99635.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298277476|gb|EFI18992.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300356207|gb|EFJ72077.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|312286906|gb|EFR14817.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331078241|gb|EGI49447.1| putative permease [Escherichia coli H299] Length = 356 Score = 71.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|215488306|ref|YP_002330737.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] gi|215266378|emb|CAS10815.1| predicted permease [Escherichia coli O127:H6 str. E2348/69] Length = 356 Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKQFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|317013268|gb|ADU83876.1| hypothetical protein HPLT_07455 [Helicobacter pylori Lithuania75] Length = 355 Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 115/354 (32%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+++ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFKFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + +D T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEYKYWILHDTTIYEMPLSFELGANALSTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + N + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHALMRQNA-DTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + ++LS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLALSLWYFKKL 351 >gi|301325676|ref|ZP_07219137.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847531|gb|EFK75291.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|323966511|gb|EGB61944.1| permease YjgP/YjgQ family protein [Escherichia coli M863] gi|327251764|gb|EGE63450.1| hypothetical protein ECSTEC7V_3616 [Escherichia coli STEC_7v] Length = 356 Score = 71.3 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDVLIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|148651872|ref|YP_001278965.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] gi|148570956|gb|ABQ93015.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] Length = 449 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 61/164 (37%), Gaps = 1/164 (0%) Query: 195 DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIK 254 D + +D+ + Q +++ +N+PI + + S ++ + Sbjct: 286 DTQATSVDSDQSGQAMALTSQPLVAKQAESTDVINLPISPSSVYLLTRRAEDLSLTQLYE 345 Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ E F+ ++ P ++++ ++A S R++ + + I Sbjct: 346 HKRFNASQGTRSL-EHEVAFWQKLLSPFSVLSLVIVACSFVFGSLRTHSLGLRIVVAIIF 404 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 G + I + + P+ L+P+I + L ++ ++ Sbjct: 405 GLLFSYIQDLTSFVSLATGAPPLLMVLLPIIGSGLLGFYLIRRQ 448 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 71/219 (32%), Gaps = 5/219 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K L L+ +LG L V + + Y+ R P + Sbjct: 20 IISRYVKKNALFAMLFAVLGLWALQMVFAYLAELEDISDA--YTYVDALTYIFYRSPYFL 77 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 QQ +P L+ +V L SEL++ RA G+SI++++ + + + I +L+ I Sbjct: 78 QQFMPTGALLGAVVGLGLLANNSELIVMRAAGLSIYRIVGWVLQPAFIFVILALLINQFI 137 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + + S W + P + K + + I Sbjct: 138 LPQSNVKASQIRK---PDTALLASVNGYWTLQNAPTEAGSTTDNKEGLSSEQAHNIIFID 194 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID 222 N I N+ + K Y Sbjct: 195 YADANGNIGEVKRWHLDADNNLTAVSKATGGTYVPSLQQ 233 >gi|300824070|ref|ZP_07104191.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669797|ref|ZP_08370642.1| putative permease [Escherichia coli TA271] gi|331679054|ref|ZP_08379726.1| putative permease [Escherichia coli H591] gi|300523460|gb|EFK44529.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|324119792|gb|EGC13672.1| permease YjgP/YjgQ family protein [Escherichia coli E1167] gi|331062710|gb|EGI34624.1| putative permease [Escherichia coli TA271] gi|331073119|gb|EGI44442.1| putative permease [Escherichia coli H591] Length = 356 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|329118130|ref|ZP_08246842.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] gi|327465790|gb|EGF12063.1| YjgP/YjgQ family permease [Neisseria bacilliformis ATCC BAA-1200] Length = 431 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 110/348 (31%), Gaps = 7/348 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I + F K T + + + ++ + + + + A L Sbjct: 67 PMIYRQNFIKELTYTAVGIFVVILAVLVSTQAVNLLGRAAD-GRVAADAVAALIGFWTLG 125 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ + + V R SE+ + + G+S+ Q L P + ++ + Sbjct: 126 MTPLLLVLTAYISVLTVLTRFWRDSEMAVWLSCGLSLKQWLRPVLAFALPFAALVAAMQL 185 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E + + K + + + + ++ + F Sbjct: 186 AVLPWAELRSREFAELLKQKQELSLVEAGEFRTLGKRNGRVYFVETFDTESGVMKNLFLR 245 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK + + + + K L+ Y+YG IP + + + Sbjct: 246 EQDDKGRENVVFAKEGRFALTDHKRTLELTQGYRYGGIPGEADYNRVGFEHLSLVISTTP 305 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + I N + + + + +PL V + ++A +S R+ Sbjct: 306 KIVNPVDHRRTIPTARLIG----SDNPQYRAELMWRVSLPLAAVILAILAVPLSYFNPRT 361 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 + + I + +T++++ ++G + A +P+ + + Sbjct: 362 GHT-YNILFAIGFFLVYQNGLTLLRNAIENGKIG-FWAGFLPLHILML 407 >gi|26249548|ref|NP_755588.1| hypothetical protein c3717 [Escherichia coli CFT073] gi|170018761|ref|YP_001723715.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|254162934|ref|YP_003046042.1| hypothetical protein ECB_02856 [Escherichia coli B str. REL606] gi|300916913|ref|ZP_07133616.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923637|ref|ZP_07139665.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300950816|ref|ZP_07164702.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958361|ref|ZP_07170502.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|301643654|ref|ZP_07243695.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|307139670|ref|ZP_07499026.1| hypothetical protein EcolH7_16283 [Escherichia coli H736] gi|312972759|ref|ZP_07786932.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643681|ref|ZP_08344812.1| putative permease [Escherichia coli H736] gi|26109956|gb|AAN82161.1|AE016766_249 Hypothetical protein c3717 [Escherichia coli CFT073] gi|169753689|gb|ACA76388.1| permease YjgP/YjgQ family protein [Escherichia coli ATCC 8739] gi|242378536|emb|CAQ33322.1| ybl136 [Escherichia coli BL21(DE3)] gi|253974835|gb|ACT40506.1| conserved hypothetical protein [Escherichia coli B str. REL606] gi|253978990|gb|ACT44660.1| conserved hypothetical protein [Escherichia coli BL21(DE3)] gi|284923007|emb|CBG36099.1| putative permease [Escherichia coli 042] gi|300314945|gb|EFJ64729.1| hypothetical protein HMPREF9547_04075 [Escherichia coli MS 175-1] gi|300415883|gb|EFJ99193.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420078|gb|EFK03389.1| hypothetical protein HMPREF9548_01830 [Escherichia coli MS 182-1] gi|300449911|gb|EFK13531.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|301078038|gb|EFK92844.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|309703416|emb|CBJ02755.1| putative permease [Escherichia coli ETEC H10407] gi|310332701|gb|EFP99914.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|323936015|gb|EGB32310.1| permease YjgP/YjgQ family protein [Escherichia coli E1520] gi|323941918|gb|EGB38097.1| permease YjgP/YjgQ family protein [Escherichia coli E482] gi|331037152|gb|EGI09376.1| putative permease [Escherichia coli H736] gi|332344939|gb|AEE58273.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 356 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLIDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|313683045|ref|YP_004060783.1| permease yjgp/yjgq family protein [Sulfuricurvum kujiense DSM 16994] gi|313155905|gb|ADR34583.1| permease YjgP/YjgQ family protein [Sulfuricurvum kujiense DSM 16994] Length = 362 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/347 (11%), Positives = 107/347 (30%), Gaps = 5/347 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 YL+ L+ + DL E +++ N + + + ++P Sbjct: 7 LSSLYLRYFSIVLIALSSFMVGFDLMENASELPHSANL----VLIYIMYKYFYAVDMMLP 62 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 I L R++ LV +IG S ++L PF+ + LL + + Sbjct: 63 ISLTFAMIASLVELVRSNALVAYFSIGYSKARILAPFLTMTTLLISIYIGLHATNFARAN 122 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + +L + + + +E + Sbjct: 123 EFADNLRDSSEFIRPTSNLFFTHEGNYIYFGNLYPLSKRAEDIRIFTFEKGQLKEALSAS 182 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 + ++R + + G + DK + + K + E + + Sbjct: 183 EAVYRNGFWNIEKAHMLRPPEDFDLKGLGIVTEDKENLKVLRDFKPKILDQVYEGKVNFT 242 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + ++ ++ N+ + + Y + + P + +I + + SR + Sbjct: 243 ITDGLEALTLLKNQNV-DVAKIMSGMYRMFITPWFAPLLMVIFFTYTPVSSRFLNLSLFS 301 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I + M++ ++ + + + P ++P+ L + + L Sbjct: 302 FGAILATLMVWGLLFMFGELSNNKTISPEIGIILPIGLLFIVMVWRL 348 >gi|331648771|ref|ZP_08349859.1| putative permease [Escherichia coli M605] gi|330909041|gb|EGH37555.1| permease Ygh-P1, YjgP/YjgQ family [Escherichia coli AA86] gi|331042518|gb|EGI14660.1| putative permease [Escherichia coli M605] Length = 356 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|149200566|ref|ZP_01877574.1| putative permease, YjgP/YjgQ family protein [Lentisphaera araneosa HTCC2155] gi|149136338|gb|EDM24783.1| putative permease, YjgP/YjgQ family protein [Lentisphaera araneosa HTCC2155] Length = 329 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 116/325 (35%), Gaps = 28/325 (8%) Query: 57 TRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFT 116 +P I+ IP +LV +VF ++ +E+ RA GIS+WQ++NP ++ +++ Sbjct: 1 MLLPKILAYAIPIASLVSVTLVFSRMSAENEITAMRASGISLWQIVNPAILLALVSSACL 60 Query: 117 VLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWM---------------------QI 155 + E +++ + + ++ Sbjct: 61 FYLNMFAVPHLEATRKSMMKGELLSNPSTFLRGGTTIDLGKLSVEIGEKKEDGTLKDLRV 120 Query: 156 SNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ 215 + I + ++L ++ + T + + + D + + NDK + K + + Sbjct: 121 IEVDKATDIVSNQLLAQSGKIINTTENSFTIEFIDVIILDNNWEFLKNDKGENKSLSGVK 180 Query: 216 YGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF- 274 R+P + T +++ ++ + E+I +++ R E Sbjct: 181 VTRLPNANTTYTFYTNDELNS-GNLRKRAKYLNIKEMIARLAVLKNKEQTKTVRREHTDL 239 Query: 275 ----YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 + + +A L+A L SRS I + + Y I I +F K Sbjct: 240 LYNLNKNLALSFSPLAFLLMALPFGLRSSRSE-TSIGLLISLIVMMTYYATILITGAFDK 298 Query: 331 SGILLPVAAALIPVILTISLSILIL 355 + P +P I+ SL + ++ Sbjct: 299 HTAMHPEILVWLPNIIFQSLGLGMI 323 >gi|55980367|ref|YP_143664.1| hypothetical protein TTHA0398 [Thermus thermophilus HB8] gi|55771780|dbj|BAD70221.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 336 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 106/355 (29%), Gaps = 22/355 (6%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L + L DL + + +L R+P + Sbjct: 2 LGRYVLREVLVPYLVGVFLFAAL-LTFDLLSSLSGVLLSRGVGAREVGLLVLYRLPWTLS 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V L R SEL + A G+ LL P V+ ++ + + +L + + Sbjct: 61 LALPLGLVFAVLVGLAGLIRRSELKAAYAAGVPPLALLRPLVLLALAVSLLNLLNLAELR 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ L+ + + + F PE + + Sbjct: 121 PRSQEAYDGLLGRILYGEGGASGVLRRQVYAPPGLGVYFAEEVYPEPEGNRLRGVRVVDE 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R + +++++ K + + + + + + Sbjct: 181 RG------RVYSAEEGLWDEEGWRLKGYVVEGEEVRPFEGVLPFPARFRPKESLGSRDPY 234 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S E+ + ++ + R L L+ + + S + Sbjct: 235 DSTPLEELWARAQVEPEARFAFHRR------------LADALGGLVLGAAAAALGLSLRE 282 Query: 305 RIIVAYG-IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 G + F Y + T+ + + P+ A +P + +L+ + + Sbjct: 283 AAWAFLGVVLLIFGYYVLWTLAAQLAR-YDVSPLLA-YLPDLFYGALAGALAWRL 335 >gi|157162460|ref|YP_001459778.1| YjgP/YjgQ permease [Escherichia coli HS] gi|157068140|gb|ABV07395.1| putative permease, YjgP/YjgQ family [Escherichia coli HS] Length = 356 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTKDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|24114288|ref|NP_708798.1| hypothetical protein SF3027 [Shigella flexneri 2a str. 301] gi|30064335|ref|NP_838506.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|24053444|gb|AAN44505.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042592|gb|AAP18316.1| hypothetical protein S3228 [Shigella flexneri 2a str. 2457T] gi|281602371|gb|ADA75355.1| putative permease [Shigella flexneri 2002017] gi|313648098|gb|EFS12544.1| hypothetical protein SF2457T_3698 [Shigella flexneri 2a str. 2457T] gi|332752656|gb|EGJ83041.1| hypothetical protein SFK671_3614 [Shigella flexneri K-671] gi|332753042|gb|EGJ83426.1| hypothetical protein SF434370_3221 [Shigella flexneri 4343-70] gi|332765462|gb|EGJ95680.1| hypothetical protein SF293071_3544 [Shigella flexneri 2930-71] gi|332999939|gb|EGK19522.1| hypothetical protein SFK218_4003 [Shigella flexneri K-218] gi|333014895|gb|EGK34240.1| hypothetical protein SFK304_3820 [Shigella flexneri K-304] Length = 356 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRAGSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|304413752|ref|ZP_07395196.1| inner membrane component LptF of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] gi|304283843|gb|EFL92237.1| inner membrane component LptF of LptABCFG lipopolysaccharide transporter [Candidatus Regiella insecticola LSR1] Length = 367 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 122/356 (34%), Gaps = 17/356 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K K+ + L +++ L I ++ +P + Sbjct: 2 IITKYIIKKTFKSQMAILFILLLIFISQKLIAILSE-TVNGEIPTHLILSFLGLGLPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q ++P + ++ + ++ E+ + A G S L+ ++ ++ + Sbjct: 61 QLVLPLSLFLGLLITYGKMHTEREITVMHACGFSQNSLILVALILAMGTAALAAINTLWF 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ ++ N + + + +F+GA +HI+ Sbjct: 121 MPWSVTYQGKILNDFRANPTLAALIEGQFQSSMDGKTVLFVGAVDGKKFDHIFLAQLQPD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG-----RIPIDKNSTTLNIPIKMDGFQ 238 ++ I+ ++ +A + + +Y R + + I Sbjct: 181 GSRRPSIVIAENGYIAERPDGSQIVTLDKGTRYEGTALLRDFRITDFKNYQVTINPQSIT 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + S + + A ++F++ + + ++ M L+A +S+ Sbjct: 241 QNTNTSEQMSIRSLWHS----------SHPDARSEFHWRLTLITSVIIMALLAVPLSVVN 290 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R ++ + + I + + + + ++S G L P+ + ++L+I++ Sbjct: 291 PRQSRT-LNMLPAILLYLIFFLLQSSLRSSTAQGKLDPLLWLWMVNGAYLALAIVL 345 >gi|310816137|ref|YP_003964101.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] gi|308754872|gb|ADO42801.1| putative permease, YjgP/YjgQ family [Ketogulonicigenium vulgare Y25] Length = 379 Score = 70.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 37/359 (10%), Positives = 107/359 (29%), Gaps = 7/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G RY + +F L +++ +V + +Q+ + A +P Sbjct: 1 MGRFDRYLLSQLMTLFGFFSLVLIMVYWVNRAVALFDQLIS-DGQGMWVFVEFTALSLPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II+ ++P V ++ V L+ SELV+ ++ G S +++ +V ++ + ++ + Sbjct: 60 IIKLVLPLSAFVASVYVANRLSGESELVVVQSTGFSPARVMRAVMVFGLIAVVMVQILAH 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + + +M ++ + Sbjct: 120 VLVPLSNQRLNIRQAEVTQTATARILRAGEFMTPIAGVTLYIRSITPEGELQDVFLSDSR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVK----LKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ R V ++ + + ++ + Sbjct: 180 ASLADTIYTASRAYIVRTERAPQLVMVDGSIQNLSHQTERMSFTTFSDFAYDLSSILPSV 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + +++ N R E + ++ + A + Sbjct: 240 DPAALSLRNATTLQLLLARDEMTLLFGADNIRTEIHDRLSEPLLGLIGPLLGFATLLIGG 299 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 FSR +A + ++ I + + +P + + ++ L+L Sbjct: 300 FSRFG-LSRQIAAAVGLVILVKMIESTATGAIRRDA-GLWWTLYLPAVFGLGITGLLLF 356 >gi|329907053|ref|ZP_08274545.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] gi|327547110|gb|EGF31984.1| hypothetical protein IMCC9480_3108 [Oxalobacteraceae bacterium IMCC9480] Length = 376 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 111/353 (31%), Gaps = 8/353 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + + T + + L +I Q + L + Sbjct: 2 IFQRALRRELISTAGAVFTTLFTITITVMLIKILGQAAG-GKVASEDVLALIGFAALNYM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+ T + ++V + SE+V+ A G+S+ + + + + + + L+ Sbjct: 61 PVILILTTFISVLLVVTRSYQDSEMVVWFASGLSLTRWIPTVLSCGLPVVLVIALLSFYA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++++ D K + Q S +F ++ F + Sbjct: 121 TPWANRSSSEFRERFEKRADIAKVAPGKF-QESASSNRVFFVEGVTGDAMNVRNVFVNTV 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D K+ I+ K+ + N L +Y +++ + Sbjct: 180 RDGKSSIVVSKEGRTEVDANGDKFLVLSNGRRYEGTLDERDFQLMEFESYGVLISSAVPG 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + M+ + F+ + + +PLM + + L+A + R + Sbjct: 240 LMADLSSRSMSTMALLANPDGFNQGELL----WRLSLPLMCLFLMLLAIPLGFVNPRGGR 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + +I++M++ L A PV + I +L Sbjct: 296 SA-NLIIALLLFVFYSNMISLMQAAVAQNRLGVWLA-WWPVHVLAMAVIALLF 346 >gi|293416425|ref|ZP_06659064.1| permease YjgP/YjgQ family protein [Escherichia coli B185] gi|291431781|gb|EFF04764.1| permease YjgP/YjgQ family protein [Escherichia coli B185] Length = 356 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|291284363|ref|YP_003501181.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|301017325|ref|ZP_07182089.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|331654591|ref|ZP_08355591.1| putative permease [Escherichia coli M718] gi|331664594|ref|ZP_08365500.1| putative permease [Escherichia coli TA143] gi|290764236|gb|ADD58197.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. CB9615] gi|300400298|gb|EFJ83836.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|320656364|gb|EFX24271.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661735|gb|EFX29143.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O55:H7 str. USDA 5905] gi|320666886|gb|EFX33862.1| Permease YjgP/YjgQ family protein precursor [Escherichia coli O157:H7 str. LSU-61] gi|331047973|gb|EGI20050.1| putative permease [Escherichia coli M718] gi|331058525|gb|EGI30506.1| putative permease [Escherichia coli TA143] Length = 356 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|261840174|gb|ACX99939.1| hypothetical protein HPKB_1402 [Helicobacter pylori 52] Length = 355 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 112/354 (31%), Gaps = 5/354 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L+R+ YY K L LL + ID + ++M + N + + + Sbjct: 3 LFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSAN----MIILFFTYDILFALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + ++++ +IG S Q+L+P + S+ V + Sbjct: 59 YTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAIYVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E+ +LI + + + + + K + + T + Sbjct: 119 VYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKGKTLESY 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + + + Sbjct: 179 AEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNTTRLKTFKTLKNFRPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + + Y ++P + ++++ A S +R Sbjct: 239 PAVSITDALLSLHAL-VRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + + F SGIL+P L P + +SLS+ + Sbjct: 298 ALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFVFLSLSLWYFKKL 351 >gi|193067274|ref|ZP_03048242.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209920456|ref|YP_002294540.1| hypothetical protein ECSE_3265 [Escherichia coli SE11] gi|218555554|ref|YP_002388467.1| hypothetical protein ECIAI1_3129 [Escherichia coli IAI1] gi|218696689|ref|YP_002404356.1| hypothetical protein EC55989_3396 [Escherichia coli 55989] gi|260857120|ref|YP_003231011.1| hypothetical protein ECO26_4088 [Escherichia coli O26:H11 str. 11368] gi|260869742|ref|YP_003236144.1| hypothetical protein ECO111_3809 [Escherichia coli O111:H- str. 11128] gi|293449328|ref|ZP_06663749.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300815538|ref|ZP_07095762.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|192959231|gb|EDV89666.1| putative permease, YjgP/YjgQ family [Escherichia coli E110019] gi|209913715|dbj|BAG78789.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353421|emb|CAU99487.1| conserved hypothetical protein; putative membrane protein [Escherichia coli 55989] gi|218362322|emb|CAQ99944.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI1] gi|257755769|dbj|BAI27271.1| conserved predicted membrane protein [Escherichia coli O26:H11 str. 11368] gi|257766098|dbj|BAI37593.1| conserved predicted membrane protein [Escherichia coli O111:H- str. 11128] gi|291322418|gb|EFE61847.1| hypothetical protein ECCG_02359 [Escherichia coli B088] gi|300531467|gb|EFK52529.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|320201894|gb|EFW76469.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli EC4100B] gi|323173775|gb|EFZ59404.1| hypothetical protein ECLT68_2093 [Escherichia coli LT-68] gi|323178689|gb|EFZ64265.1| hypothetical protein ECOK1180_2421 [Escherichia coli 1180] gi|323183569|gb|EFZ68966.1| hypothetical protein ECOK1357_3349 [Escherichia coli 1357] gi|323946693|gb|EGB42714.1| YjgP/YjgQ permease [Escherichia coli H120] gi|324018177|gb|EGB87396.1| hypothetical protein HMPREF9542_03232 [Escherichia coli MS 117-3] Length = 356 Score = 70.5 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|326335584|ref|ZP_08201771.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692350|gb|EGD34302.1| YjgP/YjgQ family permease [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 481 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 83/273 (30%), Gaps = 1/273 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY ++ + L +++ + +++ SI A +P Sbjct: 1 MKILDRYILSRFIFNFVSSFLIIILIFIFQTIWLYIDELAGK-GLSIFIIIKFVALMLPN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I I+P ++ +I+ + EL +A G+S+ + ++ +LL I N Sbjct: 60 LIPLILPLTVVLSSIMTLGAFGESYELAAMKASGVSLLKGTRTLILFMLLLSIGVFFTFN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + L K+ + + + + + H Sbjct: 120 NLQPWSNRKAVALRDSIKNKQPSLAISQGIFNNVQDFSIKVEKKTGENGEFLHDIVIHKL 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +I K+ +L+ L+ +++ + ++ + P FQ + Sbjct: 180 GVDGLSRTVIKAKEGELSGHKKGSNVLQLILKDGTYYEDVKSANSDITFPFVKAKFQVHT 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 S + + + Sbjct: 240 LNIDISSLNTEVSYDESGERDYYKTMNINQLSH 272 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 2/114 (1%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + + + F I + + + +AA + R + Sbjct: 347 SLINNLDNNKDNVEYQQKLINIYRLTFSDKIALAITCFVLFFVAAPLGA-IIRKGGIGMP 405 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI-LLQKED 360 + I Y + K+ +G + P A IP + L I + +L ED Sbjct: 406 LVVAIGLFLTYYFSGLLTKNMATNGNINPYIAPWIPTFFLLPLGIYLTILVNED 459 >gi|293412358|ref|ZP_06655081.1| conserved hypothetical protein [Escherichia coli B354] gi|291469129|gb|EFF11620.1| conserved hypothetical protein [Escherichia coli B354] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 94/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPI-KMDGFQKF 240 + D V L Y D N ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRHLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|222034703|emb|CAP77445.1| hypothetical protein LF82_488 [Escherichia coli LF82] gi|312947541|gb|ADR28368.1| hypothetical protein NRG857_14790 [Escherichia coli O83:H1 str. NRG 857C] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 96/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|256829583|ref|YP_003158311.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] gi|256578759|gb|ACU89895.1| permease YjgP/YjgQ family protein [Desulfomicrobium baculatum DSM 4028] Length = 392 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 120/361 (33%), Gaps = 10/361 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L R FK L G + L+ + L ++++ + L P + Sbjct: 6 LLQRELFKEMGIVASISLGGFLSLILLGRLLQLRDLFMG-QGVTFFDLVKLFTYLSPFFL 64 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +IP ++ + F + EL+ RA G+S+W LL ++ +L TV + Sbjct: 65 IMLIPVSCMLGVFLTFLRMGADRELISLRAGGVSLWPLLPAPLLLCLLCSALTVWISLSG 124 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAK-------KILPENHIW 176 + G + + + N + + + + Sbjct: 125 ISWGMDNFRNTVVELARNKTSVNVQPGVFNTSFPGLTVYARQSDPGSGALLDVFVLDSSR 184 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + +I + + + + + + I + +L++ + G Sbjct: 185 SKTRATIVAPLGRIESDSERGQVFVRLEDGHVYREQGGELSVISFESYILSLDMTRLLGG 244 Query: 237 FQKFSEQFASRSFYEIIKKMSFS-NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 F+ + S+ ++ ++ R + + + +P + + A ++ Sbjct: 245 FELKDKAPKEMSWDDLRTLKGDGFEDRSVNFQRRVDIELHKRFSLPAACIVLGFFALPLA 304 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 F + + + + F+ Y ++ + + GI+ P A +P ++ + + + + Sbjct: 305 FFFQGMKRQ-FGLIACLGTFFLYYVFLSGGMALAEGGIIAPALALWLPNVVFMLAAGIGM 363 Query: 356 L 356 Sbjct: 364 W 364 >gi|190572727|ref|YP_001970572.1| putative transmembrane permease [Stenotrophomonas maltophilia K279a] gi|190010649|emb|CAQ44258.1| putative transmembrane permease protein [Stenotrophomonas maltophilia K279a] Length = 360 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 111/365 (30%), Gaps = 19/365 (5%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY ++++ L L+ +++ L +I + + + Sbjct: 1 MLK-LDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIAD-GRLPAKLLFSQLGLQFI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ +LL P ++ + + Sbjct: 59 AYLPLILPLALMLGLLLAVARLYRDSEMAVITAIGVGPRRLLRPLLMLVVPVVALVGACS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ +I + + + + Q+ N + Sbjct: 119 LWLGPWAGRVAEQMIIEANRSVLMAGLEPGRFTQLPNGGVVYLSSISPDGTQLGRVFLQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---IPIDKNSTTLNIPIKMDGF 237 + ++L + + + + N DG Sbjct: 179 QKDDRLEVVSAAGGRMFFEGARQRFLELDDGHQVEGPVAGGLDYRLATFARNDVALPDGA 238 Query: 238 QKFSEQFAS-RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 Q + ++ A+ Q + + PL+ +A L+ + Sbjct: 239 QTRTGDDPELMPTTQLF----------GDDRPEAQAQLHRRLAPPLIALAFALLTVPLGR 288 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + ++ + + + ++ I + +G + P + ++L+I + Sbjct: 289 SSPRQQRYGRMM-LALMAYMVGTNLMFIGSGWIANGKIPPALGLWWLTLPLLALAIWM-- 345 Query: 357 QKEDG 361 DG Sbjct: 346 YARDG 350 >gi|188494208|ref|ZP_03001478.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] gi|188489407|gb|EDU64510.1| putative permease, YjgP/YjgQ family [Escherichia coli 53638] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|213421645|ref|ZP_03354711.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 128 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 1/125 (0%) Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 D + + S + + + S R + + I PL + M L+A S Sbjct: 4 PDKLGVVALDPDALSISGLHNYVKYLKSSGQ-DAGRYQFNMWSKIFQPLSVAVMMLMALS 62 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 RS + V GI GF+ Y + I + P+ AL+P +S+ Sbjct: 63 FIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIVGALLPSASFFLISLW 122 Query: 354 ILLQK 358 ++L+K Sbjct: 123 LMLRK 127 >gi|300973446|ref|ZP_07172202.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300410788|gb|EFJ94326.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291260|gb|EFU50620.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 96/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|91212394|ref|YP_542380.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|117625286|ref|YP_854458.1| putative permease [Escherichia coli APEC O1] gi|218560055|ref|YP_002392968.1| hypothetical protein ECS88_3362 [Escherichia coli S88] gi|218691271|ref|YP_002399483.1| hypothetical protein ECED1_3630 [Escherichia coli ED1a] gi|237706273|ref|ZP_04536754.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91073968|gb|ABE08849.1| hypothetical protein UTI89_C3402 [Escherichia coli UTI89] gi|115514410|gb|ABJ02485.1| putative permease [Escherichia coli APEC O1] gi|218366824|emb|CAR04594.1| conserved hypothetical protein; putative membrane protein [Escherichia coli S88] gi|218428835|emb|CAR09636.1| conserved hypothetical protein; putative membrane protein [Escherichia coli ED1a] gi|226899313|gb|EEH85572.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294492595|gb|ADE91351.1| putative permease, YjgP/YjgQ family [Escherichia coli IHE3034] gi|307625416|gb|ADN69720.1| hypothetical protein UM146_01455 [Escherichia coli UM146] gi|315288787|gb|EFU48185.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|323951497|gb|EGB47372.1| permease YjgP/YjgQ family protein [Escherichia coli H252] gi|323957869|gb|EGB53583.1| permease YjgP/YjgQ family protein [Escherichia coli H263] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 96/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|115525294|ref|YP_782205.1| permease YjgP/YjgQ [Rhodopseudomonas palustris BisA53] gi|115519241|gb|ABJ07225.1| permease YjgP/YjgQ family protein [Rhodopseudomonas palustris BisA53] Length = 388 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 114/356 (32%), Gaps = 11/356 (3%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 Y F+ L + L ++++ + + +I L + VP++I Sbjct: 5 DSYIFRTTLASFAVILASLTGVIWITQALRGID-LMTSQGQTILTFLGLTSMAVPVLILV 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 I P ++ L SE+++ A G+S +L+ PF+ + ++ + + +A Sbjct: 64 IAPLALMIAVAHTLNRLATDSEIIVMNAAGLSPLRLMRPFMYAAAVVALLVGFIGAYVAP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 G + + + + + Q+ + ++ D Sbjct: 124 EGLRRINNWDSEITADILANILQPGRFAQLEQNLTIRVRERQPGGLLVGVFIDDR-RDPK 182 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKFSEQF 244 ++ II L + L+ ++ D M F K + Sbjct: 183 ERVSIIADHGTVLKNADGSFLVLEDGTLQRFELGKRDPALVAFGRYAFDMSKFSKARDVT 242 Query: 245 ASRSFYEIIKKM--SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV--SLEFSR 300 + + + + + + + ++ P+ A + + +R Sbjct: 243 YGIRERYLWELIWPQPGDPLVARLPNQFRAEMHDRLMAPIYPFAFAALTFAFLGMPRTTR 302 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 ++ VA I + F+L + P AAL ++L ++++ + + Sbjct: 303 QSRN-FSVAGAIAAVFLLRLAGFACSIMTNT---NPWFAALQYLLLAGAIALGMWI 354 >gi|332754457|gb|EGJ84823.1| hypothetical protein SF274771_3587 [Shigella flexneri 2747-71] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRAGSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYGC-DVCRTLVANGAIPLIPGLWLVP 333 >gi|307721571|ref|YP_003892711.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] gi|306979664|gb|ADN09699.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] Length = 358 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 109/349 (31%), Gaps = 5/349 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 ++Y +Y+K L L ++ V D ++ + S + + + I Sbjct: 4 FKYISLHYIKYFLIILTALVLFVVGFDYMGSAEELSKS---SANLILIYLVYKSFSAIDI 60 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P + I L R++ LV ++G S +L PFV S + I + + Sbjct: 61 LLPVALVFAMISTKIYLIRSNALVSFFSLGYSRVDVLRPFVFVSTAVIILFIALHAWSNF 120 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTSITI 184 + + I++ + + + + E+ + + Sbjct: 121 ARSEEFSRNIKKNAQYLSPTRDLFFAYKGKYIYFSKLLPLQESAKNIRVFSVENESLKEV 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + K + G + + + E Sbjct: 181 VVAKSARYIDNYWFIKRADIITKPDDLSLVSPGITVTKAKDLRILEGFRPKMLDQVYEGK 240 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + + + + +K NI + + Y + + P + + +I R Sbjct: 241 VNFTIKDAVDAIRLLDKQNI-NTDNIKAALYKIFIYPFFVPCLIVIIFFFVPMSVRFLNV 299 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + I + + + I+ + + ++ ++PV++ L+ L Sbjct: 300 SLFTFGAILATLLTWGILFFLIKLANNKVISSEIGIIVPVVILAVLAFL 348 >gi|323188590|gb|EFZ73875.1| hypothetical protein ECRN5871_3009 [Escherichia coli RN587/1] gi|324005417|gb|EGB74636.1| hypothetical protein HMPREF9532_04927 [Escherichia coli MS 57-2] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 96/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|260845740|ref|YP_003223518.1| hypothetical protein ECO103_3664 [Escherichia coli O103:H2 str. 12009] gi|257760887|dbj|BAI32384.1| conserved predicted membrane protein [Escherichia coli O103:H2 str. 12009] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALYVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|193062108|ref|ZP_03043204.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] gi|192932328|gb|EDV84926.1| putative permease, YjgP/YjgQ family [Escherichia coli E22] Length = 356 Score = 70.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|300905893|ref|ZP_07123626.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|301304161|ref|ZP_07210277.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|307310385|ref|ZP_07590033.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|300402362|gb|EFJ85900.1| hypothetical protein HMPREF9536_03885 [Escherichia coli MS 84-1] gi|300840574|gb|EFK68334.1| hypothetical protein HMPREF9347_02761 [Escherichia coli MS 124-1] gi|306909280|gb|EFN39775.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315062299|gb|ADT76626.1| permease YjgP/YjgQ family protein [Escherichia coli W] gi|315256879|gb|EFU36847.1| putative permease [Escherichia coli MS 85-1] gi|323377116|gb|ADX49384.1| permease YjgP/YjgQ family protein [Escherichia coli KO11] Length = 356 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 92/343 (26%), Gaps = 10/343 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + D V L Y D N Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQ--------L 231 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +K + + + L + M L+A S+S R Sbjct: 232 HLNPLVQSPNVKRKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQ 291 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 292 GRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|224438054|ref|ZP_03658993.1| hypothetical protein HcinC1_08770 [Helicobacter cinaedi CCUG 18818] gi|313144499|ref|ZP_07806692.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129530|gb|EFR47147.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 358 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 115/359 (32%), Gaps = 8/359 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L R+ YYLK L LG ID + ++ + N + + Sbjct: 2 LIRFVGFYYLKYFLIIFLGLEGFFLAIDTLKYIEELPDSANL----LILFLFYDGVFALT 57 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P ++ +I+ + ++S+L A+G S Q+L P ++ S LL + + Sbjct: 58 YTLPISLVLCSIMFYMAFLKSSQLTALMALGYSKRQILAPLLLISSLLTAGFIGLNATPF 117 Query: 125 TSGEKIGIDLIQQWKDN---GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ +I Q N KS + + + E+ Sbjct: 118 AYAKEYAESIIYQNAQNIRENLLLKSGNQYIFLRKLYPLFNGEARAEGIKVFTLDENSNL 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + N+ K+ + + K + + + Sbjct: 178 VAYHEANEAFFEKNIWVLKKAKSVDITNSPTLGEKALDISLKEELEILKGFSSKVLETIA 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S + + + + N+ + + Y L+VIP + I A R Sbjct: 238 QDKPIASIVDAFASLKIAKRQNV-SSDKIRGILYGLLVIPFFVPLCIAIIAYYIPSLPRY 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 +I I ++ + + +G++ P L+P+ + ++ + + ++ Sbjct: 297 GNLTLISFVSIIVALAIWGVFYSLSQLSVAGLVYPEVGLLLPMGILCAVFMWHIWHIDE 355 >gi|298369121|ref|ZP_06980439.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] gi|298283124|gb|EFI24611.1| permease, YjgP/YjgQ family [Neisseria sp. oral taxon 014 str. F0314] Length = 371 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 111/354 (31%), Gaps = 10/354 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + + ++ + + + ++ A L V + Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAVDAVAALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPW--MQISNPQQDIFIGAKKILPENHIWEDFTS 181 E + + K + + + + + + Sbjct: 121 MPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRSDRVYFVETFDTESGIMKNLFLREL 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 N I ++ ++L+ Y D N + + S Sbjct: 181 DKNGNDNIIFAKEGNFALTDNKRTLELRNGYRYSGKPGRADYNQVSFEHLSMI-----IS 235 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + N + + + + + +P+ ++ ++++A +S R+ Sbjct: 236 TTPKIVDPIAHRRTIPTAKLFGS-DNPQYQAELMWRLSLPISVLLLSMLAVPLSYFNPRT 294 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T ++ + G + L IL I +++++L Sbjct: 295 GHT-YNILIAIGMFLIYQNGLTFLRDAVEDGKIHFWFGMLPMHILMIVIAVVLL 347 >gi|157156628|ref|YP_001464444.1| YjgP/YjgQ permease [Escherichia coli E24377A] gi|256019096|ref|ZP_05432961.1| hypothetical protein ShiD9_09279 [Shigella sp. D9] gi|332280199|ref|ZP_08392612.1| YjgP/YjgQ permease [Shigella sp. D9] gi|157078658|gb|ABV18366.1| putative permease, YjgP/YjgQ family [Escherichia coli E24377A] gi|332102551|gb|EGJ05897.1| YjgP/YjgQ permease [Shigella sp. D9] Length = 356 Score = 70.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 96/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + + + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLKPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRIKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|306816677|ref|ZP_07450809.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] gi|305850242|gb|EFM50701.1| hypothetical protein ECNC101_08664 [Escherichia coli NC101] Length = 356 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + +K + + + L + M L+A S+S R Sbjct: 240 ANVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|299135068|ref|ZP_07028259.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] gi|298590045|gb|EFI50249.1| permease YjgP/YjgQ family protein [Afipia sp. 1NLS2] Length = 381 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 93/306 (30%), Gaps = 10/306 (3%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + L + L L+ +++V + + ++ + +P++ I P Sbjct: 3 RLTLLSFLIVLVSLTGVIWVTQALRGID-LMTAQGQTVLVFLGITGLAIPVLALIIAPLA 61 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 L+ L+ SE+++ A G+S W+ L PF+V ++++ + +A + Sbjct: 62 MLLAVTHTLNRLSADSEVIVMNAAGLSPWRFLRPFMVSTVIVACLISFLAIFLAPECLRA 121 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 + + ++++ + + +D + I Sbjct: 122 LRRWHTEIGADVLANVLQPGQFIRLDKLVLRVQERRPGGVLVGVFIDDQRNPAERIN--I 179 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPID-----KNSTTLNIPIKMDGFQKFSEQFA 245 + + L ++ D S ++ Q ++ Sbjct: 180 TAQNGVVQKTDKGSFLVLSDGNLQRFQADKKDPLIVAFKSYAFDMSQFSQAPQTYNYNAR 239 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 R E+I + + + + ++ L ++A + L R+ + Sbjct: 240 ERFIGELISPPKDDAVA-QRSLGQFRAELHDRLLAGLYPFVFVILAFAF-LGPPRTTRQG 297 Query: 306 IIVAYG 311 A Sbjct: 298 RNFAVS 303 >gi|294670275|ref|ZP_06735168.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308012|gb|EFE49255.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 370 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 114/349 (32%), Gaps = 7/349 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 F K T + + + ++ + + + ++ A L + ++ Sbjct: 7 FVKELTFTAIGIFVVILAVLVSTQAINLLGRAAD-GRVAVDAVAALIGFWTLGMTPLLLV 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + + V R SE+ + + G+S+ Q + P + ++ + + E Sbjct: 66 LTAYISTLTVLTRFWRDSEMSVWLSCGLSLRQWVRPVLSFALPFAALVAAMQLSVLPWAE 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + + K + + + + ++ + F DK Sbjct: 126 LRSREFAEILKQKQELSMVEAGEFRTLGKKNGRVYFVGTFDTGSGIMKNLFLREQDDKGR 185 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 + I + ++K L+ Y+YG IP + + ++ + Sbjct: 186 ENIIFAKEGRFSLTDNKRTLELTQGYRYGGIPGEADYNQVSFEHLNLIISATPKIINPID 245 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 I N + + + + +PL + ++++A +S R+ + Sbjct: 246 HRRTIPTAKLIG----SDNPQHRAELMWRLSLPLAALILSILAVPLSYFNPRTGHT-YNI 300 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I + +T +++ ++ L +P+ + + + +ILL+ Sbjct: 301 LFAIGFFLIYQNGLTFLRNAIENSKLG-FWTGFLPIHIIMLAAAVILLR 348 >gi|281180021|dbj|BAI56351.1| conserved hypothetical protein [Escherichia coli SE15] Length = 356 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + +K + + + L + M L+A S+S R Sbjct: 240 ANVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|261416539|ref|YP_003250222.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372995|gb|ACX75740.1| permease YjgP/YjgQ family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326800|gb|ADL26001.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 478 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 1/166 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K + L L G L V L +I + + S + + ++ Sbjct: 2 ILVRYVLKELIGPFLASLFGITFLFVVDFLVKILDNVLSK-GLPTSTVLEIFVLNLAWML 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP LV +++ F ++ E+ +A GIS L+ P ++ ++LL + V+ N + Sbjct: 61 SLSIPMAVLVASLMTFGRMSGDQEITAVKAAGISPLSLMRPVLLVALLLSVLMVVFNNWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKI 169 ++L+ D + Q + Sbjct: 121 LPEANHRSVELMNAVSRKKPHVFIDAGRLITQFPGVQLWVNRIDPV 166 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 269 RAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSF 328 + + + LI A + + +R + Y + + + + ++ Sbjct: 348 QYMVEIHKKFSTAFACFIFVLIGAPLGI-MARKGGIGTGILYSLAFFVIYWICLIGGENL 406 Query: 329 GKSGILLPVAAALIPVILTISLSILI 354 I+ P A I I+ ++ IL+ Sbjct: 407 ADRLIVSPELAMWISNIIIGAVGILL 432 >gi|126663513|ref|ZP_01734510.1| hypothetical protein FBBAL38_09194 [Flavobacteria bacterium BAL38] gi|126624461|gb|EAZ95152.1| hypothetical protein FBBAL38_09194 [Flavobacteria bacterium BAL38] Length = 132 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 1/128 (0%) Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM 287 ++ + D + + ++ ++ + FY +P+ + Sbjct: 1 MSYNFEPDDLTPVVYVAETMTIGQLNSFINKERARGNGNINTYLVVFYKKFSLPISAFIL 60 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 T+IA +VS R I +A GI F + + + + P A P I+ Sbjct: 61 TIIAVAVS-SMKRRGGMGINLAIGIVIAFTFIFFDKVFGTLAEKSSIPPFLAVWFPNIVF 119 Query: 348 ISLSILIL 355 L+ +L Sbjct: 120 GILAAYLL 127 >gi|194426331|ref|ZP_03058886.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415639|gb|EDX31906.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183223|dbj|BAG66768.1| putative permease [Escherichia coli O111:H-] Length = 356 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILLQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|190891136|ref|YP_001977678.1| permease [Rhizobium etli CIAT 652] gi|190696415|gb|ACE90500.1| putative permease protein [Rhizobium etli CIAT 652] Length = 403 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 131/363 (36%), Gaps = 12/363 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G L+ P ++ + ++ +F+ V N Sbjct: 70 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILVRPILLLAAVISVFSFFVDN 129 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + +I + + + + +I + +++ K L + F + Sbjct: 130 IVEPRAKTVARQMIAETYADLLSSVIEEKTFRKI---DEGLYVQISKRLAGRMLKGLFVA 186 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGF 237 D ++I+ + + ++ + +S + ++ + Sbjct: 187 DERDPAYELIYYAKEGAVDDSGTTLIMHDGEVHRKTPDGNVSVINFDSYSFDLSDMTESR 246 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + R + + ++K + + + ++ V L + +++ Sbjct: 247 GQATLKASDRDLWFLFNP-DPNDKDYTIRPQSYRAELHRRLTDWILPVVFALFSLAIA-G 304 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL--IPVILTISLSILIL 355 +RS++ + + + + A L +P++ +I I + Sbjct: 305 DARSHREARLHPMVSALAYAFALRWAAFYAANQIDTDPEYIAVLYGLPIVSSIVSIIFLS 364 Query: 356 LQK 358 L K Sbjct: 365 LHK 367 >gi|118474677|ref|YP_891476.1| permease YjgP/YjgQ [Campylobacter fetus subsp. fetus 82-40] gi|118413903|gb|ABK82323.1| permease YjgP/YjgQ [Campylobacter fetus subsp. fetus 82-40] Length = 353 Score = 69.7 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 112/352 (31%), Gaps = 5/352 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +Y YLK + + + ID + N + + Sbjct: 1 MKLFSKYTGLVYLKYFIIIFMALELFYIGIDTLTNLKDFPKSANLQ----LIYLSLTALT 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++P + IV N+ R++ELV ++GIS L+ + S+++ + + + Sbjct: 57 AVNYVLPISLVFALIVSKINMIRSNELVSFYSLGISKNTLILSPFIISLIITCLYIYLSS 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 LI N + + + + + +D Sbjct: 117 TSFAYARDYQKSLINFQGFNKSSNSIFLKYENKFIYIDELYPAIGEANKIKIFETQDGDI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I K ++ + ++ G I + + K + Sbjct: 177 IGQITAKKAKFEDNSWKLFDVDIISLPPRLELNATGYIENTQKELLILSGFKPRTIENIY 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + ++ S + I + I + + ++ Y LI PL M LI R Sbjct: 237 QTNSNYSITDAIDSLRTLKNEGI-NLNKIKSTLYSLIFFPLFAPLMVLILYYYLPITGRF 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + ++ ++ ++ F +G+++P ++P+I+ S + Sbjct: 296 FNLALASFIYVIVTLCIWGVLFVLIRFSLNGVIIPEIGVILPIIILASFAGF 347 >gi|224825295|ref|ZP_03698400.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] gi|224602216|gb|EEG08394.1| permease YjgP/YjgQ family protein [Lutiella nitroferrum 2002] Length = 366 Score = 69.7 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 40/356 (11%), Positives = 108/356 (30%), Gaps = 10/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + + + T + + + ++ + + E + A L + Sbjct: 2 VFQKSLTRELTFTAVSVFVVLLAILVTTQTINLLGRAAEGRIAN-EAVAALIGFWTLGLF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + +VV L R E+ + A G+S+ + P + ++ L I + I Sbjct: 61 PLLLILTVFISVLVVLTRLWRDHEMAVWLASGVSLKDWVKPVLRFAVPLAILVGISSLLI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFTSI 182 E+ + + K + D + + + ++ Sbjct: 121 GPWAEQRSHEYAEILKQHEDVSAISPGIFKESHSSRRVYFVENFSGKNGSAANIFMQDMS 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + L+ Y D + Q Sbjct: 181 KGKVASIFAKSGRIVTNEQGERLLLLENGRRYVGNPGEADYEVAEFARYSVVINDQPQFI 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + ++ S+K+ + + + + +P+ V + L+A +S RS Sbjct: 241 PSGNSRQTMTSAALALSDKAGD------KAELGWRVSMPISTVVLALLAIPLSYFNPRSG 294 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ + F+ +T+ +++ L A L P +L + +++ +L + Sbjct: 295 HTYNLLLAL-LAYFVYQNALTLCRNWVLQDRLSAY-AMLAPHMLMLLVALGMLAYR 348 >gi|149178410|ref|ZP_01857000.1| hypothetical protein PM8797T_01869 [Planctomyces maris DSM 8797] gi|148842727|gb|EDL57100.1| hypothetical protein PM8797T_01869 [Planctomyces maris DSM 8797] Length = 392 Score = 69.7 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 46/394 (11%), Positives = 112/394 (28%), Gaps = 44/394 (11%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY L+ + +L+ + + + + VP Sbjct: 1 MRLLQRYVLFELLRVFTLMITVLTVLLVFVGAFQQ----ATSQGLGVILVLKILPFIVPS 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IP L+ VV+ + E+ ++A GI++ LL P + L + ++++ + Sbjct: 57 MLPFTIPATLLLTVCVVYGRIAGDQEITAAKAAGINVLSLLWPSFILGGFLSLGSLILSD 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I EK + I + +K + I + + + + F Sbjct: 117 QIIPWAEKNIENTIACELETIFLEKLRSQNQIHDPTSGISITV--MGVRNKTLLVPTFRY 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +KK + ++A L ++ + + + + + Q Sbjct: 175 SPPNKKPVHLQAEEATLEFDLTNQQVILHISKGHIDFPGKPRFFVEKDTFPFPLPSQTTM 234 Query: 242 EQFASRSFYEIIKKMSFS--------------------------------------NKSN 263 + S I ++ N+ Sbjct: 235 AKPRHMSVKSIKSELVDLSEKKNEFEFQRDIEVAMLLALGDFEHFQSPEVNTDLPQNQFQ 294 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + +T + L+ S+ +R + Y I+ Sbjct: 295 EKRQNKLKTALSSRFALSCSCFFFVLVGCPFSIAQARRQFLTSFFLVFLPILLFYYPIVL 354 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + K G + P + + ++I +L + Sbjct: 355 LAINLAKQGKIEPTWSLWAGNAGLLIVAIHMLRK 388 >gi|86357092|ref|YP_468984.1| putative permease protein [Rhizobium etli CFN 42] gi|86281194|gb|ABC90257.1| putative permease protein [Rhizobium etli CFN 42] Length = 393 Score = 69.7 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 128/359 (35%), Gaps = 11/359 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G L+ P ++ + ++ +F+ V N Sbjct: 60 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRTILVRPILLLAAVISVFSFFVDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + +I + + + + + +++ + L + F + Sbjct: 120 IVEPRAKTVARQMIAETYADLLSSVIEEKTF---RKLDEGLYVQISQRLAGRMLKGLFVA 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGF 237 D ++I+ + + ++ + +S + ++ + Sbjct: 177 DERDPAYELIYYAKEGAVDDTGTTLIMHDGEVHRKTPDGNVSVINFDSYSFDLSDMTESR 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + + R + + ++K + + + ++ V L + +++ Sbjct: 237 GQATLKASDRDLWFLFNP-DPNDKDYTIRPQSYRAELHRRLTDWILPVVFALFSLAIA-G 294 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP-VILTISLSILIL 355 +RS++ + G+ + + A L I++ +SI+ L Sbjct: 295 DARSHREARLHPMVSALGYAFALRWAAFYAANQIDTDPEYIAVLYALPIVSSIVSIIFL 353 >gi|71891828|ref|YP_277557.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795934|gb|AAZ40685.1| putative transmembrane protein, transport [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 373 Score = 69.7 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 126/351 (35%), Gaps = 2/351 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +Y K + L L ++ F L ++ + + + SI + +P Sbjct: 2 IFTKYILKEIFRNQLIILTLLFLVCFCQKLIKMLSLVID-SGISIYLIFLCLGLNMPESG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +IPF + +V F+ L+ +E++ + + + + S ++ T++ I+ + Sbjct: 61 KLLIPFSVFLSVLVTFYRLHAHNEIIAMYSCAVDKYIFIRSIFFFSGIVATCTMINISWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L+ + K+N + + ++ +F + + +++ T+ Sbjct: 121 SPYCSSYQSKLLYKIKENINLVILSEKKFQPLATKYLILFSDSIQGNKLKNVFLSKTNPD 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D II D D +L + + Y I + +Q Sbjct: 181 KDNSMFIIITSDQGSVCRNPDGSRLIILKKGTYYEIYNKCELCQDVLITDFSQYQMLINS 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +FYE + + ++ + ++E + + L++ + + L S Sbjct: 241 TIK-TFYEKNESVDHMFMHQLWRSNKSEMRAELHWRLTLLVSIFLMPMITTLLITVVSYN 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + +F + + +++S + P+ + + +S+ +L+ Sbjct: 300 YLINLLVTVFLYIIFFIFHILLRSCVLLDNINPIVWMWVINSIYLSIVLLL 350 >gi|218701755|ref|YP_002409384.1| hypothetical protein ECIAI39_3475 [Escherichia coli IAI39] gi|227887687|ref|ZP_04005492.1| inner membrane protein [Escherichia coli 83972] gi|301019930|ref|ZP_07184065.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371741|emb|CAR19592.1| conserved hypothetical protein; putative membrane protein [Escherichia coli IAI39] gi|227835083|gb|EEJ45549.1| inner membrane protein [Escherichia coli 83972] gi|299882028|gb|EFI90239.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|307555075|gb|ADN47850.1| putative permease [Escherichia coli ABU 83972] Length = 356 Score = 69.7 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G + +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGNPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|84622418|ref|YP_449790.1| hypothetical protein XOO_0761 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578607|ref|YP_001915536.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425052|gb|AAW74089.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366358|dbj|BAE67516.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523059|gb|ACD61004.1| putative permease, YjgP/YjgQ family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 360 Score = 69.7 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 34/363 (9%), Positives = 101/363 (27%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPTRMLRPLLMLVVPVVVVIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S+ Sbjct: 119 LWLGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSDGGVVYMQTISADGKGLGKIFLQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + + L + + + Sbjct: 179 QQNDRIDVVTADRGALFFEGKTDRYLHLDDGYRTEGPAGGATLDYRLMKFASSDIALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +S + Q + + PL+ +A ++ +S Sbjct: 239 TRLHDANDPEVMWTTQLLSDERPAA-------RAQLHERLAPPLLALAFAMLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKAPAALGLWWLTLPLLAVAVWA--YA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|145637644|ref|ZP_01793299.1| predicted permease [Haemophilus influenzae PittHH] gi|145269167|gb|EDK09115.1| predicted permease [Haemophilus influenzae PittHH] Length = 161 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 1/149 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY K L T L+ + L +I E +G+ Y I + + +P Sbjct: 1 MINTLDRYIGKSILGTIFATLMTLVGLSAIIKFVEQFRSVGK-GTYDIWQAVIFTGLTIP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ P L+ ++ NL SELVI ++ G S +++ + ++ L +FTV++ Sbjct: 60 KDIETFFPMAALLGALIALGNLASRSELVIMQSAGFSRFKIGIAVMKTALPLVVFTVIIG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDI 149 E+ D+ + G Sbjct: 120 EWGIPQTEQFARDMRAKALSGGSILSIKN 148 >gi|325971216|ref|YP_004247407.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] gi|324026454|gb|ADY13213.1| permease YjgP/YjgQ family protein [Spirochaeta sp. Buddy] Length = 420 Score = 69.3 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 117/409 (28%), Gaps = 60/409 (14%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +R+ + YL + L + F+ + I ++ L L +P + Sbjct: 11 YRHIGREYLLSFLVAFFFFFFIFFINQILLIAQRIL-LKQVDYFSVLQLVLLSIPQFLLY 69 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 PF +L + +V +L+ +E++ R+ GIS+ + P ++ S+ + T L + Sbjct: 70 TFPFSSLTASSMVIGDLSGNNEILAIRSSGISLKHVFIPIIIISLAFSMLTFLTADKALP 129 Query: 126 SGEKIGIDLIQQWKDNGD------KQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 K +L + + I + ++ + + + + + Sbjct: 130 WSTKKYRELYTDLMRDLPTLELMANSTNTIANTVMVNKGVEGNTVHDIILFETSSVRGGQ 189 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + + + + ++ + LK + + + LN ++ Sbjct: 190 ILSAPKAEVSLYDLQSFIYQLELDNPLILKSETQGGWALSKAESAQFFLNFSGQIASIAS 249 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV-------------------- 279 S E+ + + + R + + L + Sbjct: 250 ALPSQ--LSIKELQQNIQEHKIALQAEKKRYQEKVQTLELSLAELVDKAKTDAEVSVSHI 307 Query: 280 ------------------------------IPLMLVAMTLIAASVSLEFSR-SNQPRIIV 308 L L+ + SL F R + I Sbjct: 308 EELEVQLKQLKDQKPINFYYQYYRAELHKKYALSAACFMLVFLTFSLSFFRVKHGRLIGF 367 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + ++ + S + P P +L +L LL Sbjct: 368 GLSMLVAVVYWYLLFFAQMQIFSLSISPALLIWSPNLLMFFGGLLFLLH 416 >gi|320539289|ref|ZP_08038959.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] gi|320030681|gb|EFW12690.1| putative conserved inner membrane protein [Serratia symbiotica str. Tucson] Length = 396 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 124/351 (35%), Gaps = 7/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y + LK+ + L +++ F +L + + + + + L VP + Sbjct: 34 IIIKYLVRETLKSQIAILFILLLIFFCQNLVRVLGDVVD-GDVPTNLVLSLLLLGVPKMA 92 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ F L SE+ + A G+ L+ ++ +IL + + Sbjct: 93 QLILPLSLFLGLLMTFGRLYTESEITVMHACGLGKRTLIIAAMILAILTSAVAAVNVFWA 152 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ + K N + + +FIG K N+++ Sbjct: 153 NPIASSYQDVVVSEAKANPSIAGLVEGQFKPSQDGNAVVFIGNVKGSTFNNVFLAQLRTN 212 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ ++ + ++ + + ++ + ++ + + Sbjct: 213 GTQRPSVVVAEHGNINPQKDGSQVVTLDKGTRFEGTALLRDFRITDFNNYKAVIGHRAVA 272 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ + A +F++ + + + +V M L+ +S+ R + Sbjct: 273 VDNTQSEQM-----SMKTLWQSDDPDARAEFHWRLTLVVSVVLMALLVVPLSVVNPRQGR 327 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I + + + T ++S G L P+ + ++++ + Sbjct: 328 V-LSMLPAILLYLIFFLLQTALRSNAGKGKLDPIIWLWGVNVAYFAIALAL 377 >gi|332976301|gb|EGK13158.1| permease YjgP/YjgQ [Psychrobacter sp. 1501(2011)] Length = 455 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 56/148 (37%), Gaps = 1/148 (0%) Query: 211 VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 V++ + + +++PI + + + S ++ F+ Sbjct: 308 VLDNEPLVAKQTQAEDVISLPISPNSVYLLTRRAEDLSLTQLYDHKQFNASQGTRSL-EH 366 Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 E F+ ++ P ++++ ++A S R++ + + + G + I + Sbjct: 367 EVAFWQKLLSPFAILSLVIVACSFVFGSLRTHSLGLRIVVALIFGLLFSYIQDLTSFVSL 426 Query: 331 SGILLPVAAALIPVILTISLSILILLQK 358 + P+ L+P+I + L ++ ++ Sbjct: 427 ATGASPLLMVLLPIIASALLGFYLIKRQ 454 Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I+ RY L L+ +LG L V + + +Y+ + P Sbjct: 19 KIISRYVKTNALFAMLFAVLGLWALQIVFAYLAELEDISD--SYTYFDALTYILYKSPYF 76 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 ++Q P L+ ++ L SEL++ RA G+SI+++++ + + + I + + Sbjct: 77 LEQFTPTGALLGAVIGLGLLANNSELIVMRAAGLSIYRIVSWVLQPAFIFVILALGINQY 136 Query: 123 IATSGEKIGIDLIQ 136 + + + + Sbjct: 137 VLPETNLMANQIRK 150 >gi|32266995|ref|NP_861027.1| hypothetical protein HH1496 [Helicobacter hepaticus ATCC 51449] gi|32263047|gb|AAP78093.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 359 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 122/363 (33%), Gaps = 19/363 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 ++R+ YYLK LG ID+ + +++ + N + + Sbjct: 2 IFRFVGVYYLKYFFIIFLGLEGFFLAIDMLKYVDELPDSANL----LILFLFYNGIFALT 57 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P ++ +I+ + ++S+L A+G S Q+L P +V S + + + Sbjct: 58 YTLPISLVLCSILFYMAFLKSSQLTALMALGYSKRQILAPLLVISSVFIGGFIGLNTTSF 117 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ +I Q ++ + S+ Q +L E E T+ Sbjct: 118 AYAKEYAESIIYQQNTQNARE-----NLLLKSDNQYIFIRKLYPLLNEQARAEGIKVFTL 172 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR---------IPIDKNSTTLNIPIKMD 235 D ++K+ + +A A N+ LK V + + Sbjct: 173 DGEHKLKNYHEAQEAFFENNVWILKNVKSLEIASSLTLGEKALKITTSGEIEILKDFSSK 232 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 + ++ + S + I + + + + + Y L+VIP + I + Sbjct: 233 VLETIAQDKPTASVIDAIASLRIA-HKQNVSSDKIRSILYALLVIPFFVPLCIAIISYYI 291 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R I I ++ + + +G++ P L+P+ + + + + Sbjct: 292 PSLPRYGNLTFISFVCIIGALAVWGLFFSLSQLSVAGLIYPEIGLLLPMGILFVVFLWHI 351 Query: 356 LQK 358 Sbjct: 352 RYL 354 >gi|222824356|ref|YP_002575930.1| hypothetical protein Cla_1363 [Campylobacter lari RM2100] gi|222539577|gb|ACM64678.1| conserved hypothetical integral membrane protein [Campylobacter lari RM2100] Length = 353 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 111/356 (31%), Gaps = 5/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +RY YLK+ ID N++ + N + L Sbjct: 1 MNVFFRYISSLYLKSFFILFFSLTFFFVAIDFLVNFNKIPKSANLELLYILFLT----CS 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + I+ FN+ R++E V A+G+S Q++ + ++ + + Sbjct: 57 AVSYILPLAIVFALILCVFNMIRSNEFVSLYALGLSKNQVIFYPFLWALFFCFVYIGLNF 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++I+ + + I + ++ + + D Sbjct: 117 TPFAYANEYKSNIIKTGLVSREGGNVLIKYDNKFVYIEKTSTNSLYNVKIFDVKNLDIKQ 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 +T KK + + + + V + N K+ Sbjct: 177 LTQAKKAQFNGQSWELIDVKTIKVPDKLIVSQEGLKIKDFKSIKGLENFSPKILERISLV 236 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E S S + ++ + T Y L+ IP + L+ +R Sbjct: 237 ESDPSYSISDALESI-LIFAKQDISTNTLRTSLYSLVFIPFFAPFLMLVIYYYFPITARF 295 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + S + ++ ++ ++ ILLP ++P+ + I + + Sbjct: 296 FNLAFLAFVFFISVLSAWGLLFLLTRLSENEILLPEFGIMLPIFILICMGSWFYYK 351 >gi|260450919|gb|ACX41341.1| permease YjgP/YjgQ family protein [Escherichia coli DH1] Length = 359 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 115/344 (33%), Gaps = 7/344 (2%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + LK+ L L +++ F L I + + + L VP + Q I+P Sbjct: 2 RETLKSQLAILFILLLIFFCQKLVRILGAAVD-GDIPANLVLSLLGLGVPEMAQLILPLS 60 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 + ++ L SE+ + A G+S L+ ++ ++ I + + + Sbjct: 61 LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH 120 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 +++ + K N + Q +N +FI + ++ + + + Sbjct: 121 QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV 180 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 + L + + + ++ + ++ + + + Sbjct: 181 VVADSGHLTQLRDGSQVVTLNQGTRFEGTAMLRDFRITDFQDYQAIIG-----HQAVALD 235 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 RA + + I + + M L+ +S+ R + + + Sbjct: 236 PNDTDQMDMRTLWNTDTDRARAELNWCITLVFTVFMMALMVVPLSVVNPRQGRV-LSMLP 294 Query: 311 GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + I T +KS G G L P ++ ++L+I++ Sbjct: 295 AMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVL 338 >gi|284799560|ref|ZP_06390217.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797388|gb|EFC52735.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 181 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 65/176 (36%), Gaps = 2/176 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ ++ ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGK-GSYNGAKLGQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ ++ L SEL + +A G+S +LL ++ I TV + Sbjct: 60 RAYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 +A + + ++ NG + W++ I + Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLKEKTASSTCAKCCPTIPCWASKFG 174 >gi|293604027|ref|ZP_06686440.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292817631|gb|EFF76699.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 369 Score = 69.3 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 119/355 (33%), Gaps = 6/355 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R +I+ + L + + N VLAA + I Sbjct: 6 RSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAG-GNIGADVVLVLAALSTITALPTI 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + + R SE+V+ A G+S+ L P + ++ + + + A Sbjct: 65 LAVSIFIAVLTTVTRNYRESEMVVWFASGLSLADWLKPVLRVAVPVALAVAGLTLVAAPW 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + + ++++ D K + S+ +F + P + + F T + Sbjct: 125 AYRQIGEYHERFEQRSDLSKVTAGQF-AESSGGSRVFFSEDPVTPTDELGNVFARETGPE 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK---MDGFQKFSEQ 243 ++ A + N L ++Y P ++ ++ Sbjct: 184 WLSVLTASSAHSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVHFNKYGLRLESKAGGDPI 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +R+ E K + + + + +Q + I +PL + + L+A + R + Sbjct: 244 AEARAAAERSSKARTTMQLVEDNTDSSWSQVMWRISLPLAALNLALLAIPLGAVNPRLGR 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ G+ G + +I + +++ +G L L++ +L+++ Sbjct: 304 SGDLLIAGL-VGLLYMNLINLSRAWISNGKLSFGVGVWAIHGAVALLTVFLLMRR 357 >gi|320449377|ref|YP_004201473.1| putative permease, YjgP/YjgQ family [Thermus scotoductus SA-01] gi|320149546|gb|ADW20924.1| putative permease, YjgP/YjgQ family [Thermus scotoductus SA-01] Length = 368 Score = 69.3 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 44/369 (11%), Positives = 102/369 (27%), Gaps = 20/369 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L+R+ K L L LL + L + + A + VP ++ Sbjct: 2 TLYRHLLKESLPVLLLALLFLTAVYLFGFFYAGAR---WLEGVPLWKVARWLSYHVPGVL 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+ P + ++VF L+ + G+ +W+ P V LL + + + Sbjct: 59 VQVFPIALVTTTVLVFGRLSAEGAQFALLSGGVPLWRAALPLVGIGALLSGVALYLQERL 118 Query: 124 AT---------SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 ++I ++ G + + + + + Sbjct: 119 VPHYNEKVRVAWWDEIHTQGAGLFRLKGLQIPIGKGRNLYFEDFDMEKKEMVGVRIASFQ 178 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK--------VVEYQYGRIPIDKNST 226 E + D D ++ + + R+ Sbjct: 179 GEEGTFLFAERGSWEDKRITLRDYRFFRIDFQEIPRLETASDLLAQTRKVFRVVSQGKIM 238 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 + + S + + + + + + + F + L L Sbjct: 239 EVESDLSRARAIADYADTFSFGQDSLSEAWAKMRDPFLAPLEKWQARLEFHSKLALPLAN 298 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 + L+ +V++ + + + Y + + +S G L P A +L Sbjct: 299 LVLVLLAVAMALKYGRSTGLALGLSVVLALGYYGVFFLGRSLAGIGALPPEVGAWGANLL 358 Query: 347 TISLSILIL 355 + L I L Sbjct: 359 FLLLGIRAL 367 >gi|320195130|gb|EFW69759.1| Permease Ygh-P1, YjgP/YjgQ family [Escherichia coli WV_060327] Length = 356 Score = 69.3 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V+ + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVMLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLEHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|331659262|ref|ZP_08360204.1| putative permease [Escherichia coli TA206] gi|315297643|gb|EFU56920.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331053844|gb|EGI25873.1| putative permease [Escherichia coli TA206] Length = 356 Score = 69.3 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDLSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + +K + + + L + M L+A S+S R Sbjct: 240 ANVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|297624271|ref|YP_003705705.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] gi|297165451|gb|ADI15162.1| permease YjgP/YjgQ family protein [Truepera radiovictrix DSM 17093] Length = 359 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 90/299 (30%), Gaps = 3/299 (1%) Query: 45 NYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNP 104 + A +P +P L ++ L++ SE+ +G+S Q L P Sbjct: 46 GVGPALVARFLLYSIPSAAAMGLPLALLFAALLGITRLSQDSEIKAGLLLGLSPRQFLTP 105 Query: 105 FVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI 164 ++ +L+ + + +A + + ++ + + + + + Sbjct: 106 ILLLGLLVSTVSFINNELLAPWSYRRAQEALKDILVQSPETLIEAGSFFTDALGRSVYLG 165 Query: 165 GAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + T I R ++ + +L + +Y + + Sbjct: 166 SIAPGGVVRDVTVIQPGGTAGPSEVI--RAESGVLDEAAGVWRLNGIRMLRYRDGRVVLD 223 Query: 225 STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML 284 + + + G S + + + + +N T + P Sbjct: 224 APADEALLPVRGLSASSSTPPELTRLPLRELFARLRGTNPQDAPAEWTALHRKFAEPSAA 283 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 A L A S+ L R + + +F F+ Y ++ G G L A +P Sbjct: 284 FAFALFALSIGLYSFRR-NFGLGLVSVLFLTFIYYATWSVSNLLGAQGTLPAAVAGWLP 341 >gi|269213540|ref|ZP_06158031.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146392|gb|EEZ72810.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 181 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 2/171 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ + A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGK-GSYNGATMAQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL ++ I T + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLVLSQFGLIFAIATAALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE 172 IA + ++ NG + W++ + I Sbjct: 120 WIAPVLSQKAENIKSTAI-NGKISTGNTGLWLKEKTASSTCAKCCQTIPCW 169 >gi|87306756|ref|ZP_01088903.1| hypothetical protein DSM3645_10492 [Blastopirellula marina DSM 3645] gi|87290935|gb|EAQ82822.1| hypothetical protein DSM3645_10492 [Blastopirellula marina DSM 3645] Length = 380 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/370 (11%), Positives = 113/370 (30%), Gaps = 30/370 (8%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + Y K LL ++L+ V G S + VP Sbjct: 1 MRTIQTYVVWEVFKIFFLCLLATVLLMVVGGGVNE----GLKKGLPPSIILGMMPYFVPE 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++ IP L VF ++ ++E+V ++ GI+ +++ P +V + L T + + Sbjct: 57 MLRFTIPGCLLFSICTVFGRMSASNEIVALKSAGINPIEIIWPVLVATYALSFVTFGLYD 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP-------------QQDIFIGAKK 168 A +I Q D+ + + I + Sbjct: 117 VCAGWSRPNMHRIIIQSLDDTAYSMLRTQKSFSMQGFSVRVKGVDDRRLIEPFITVQTPN 176 Query: 169 ILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY--------QYGRIP 220 PE + + + + + + + + Y D +V + + Sbjct: 177 GGPEFTLTAEEAELESNPETGALQVVCRNSFMEYGDGTNFSQVEPFVHQITQLGTLDQDL 236 Query: 221 IDKNSTTLNIPIKMDGFQK----FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + L + + + + + ++++ + + +R + + Sbjct: 237 NSASPAALTLRHIPAQIAREAKLLEDTINALHIGGDPEAIAYAAEGHQKRLWRLQAERQR 296 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 + L + V++ S+ + + Y ++ ++ + G+L P Sbjct: 297 RLSNGLGCFCFACVGIPVAMWRRTSDNVTTFFLCFLPILGVYYPLLVTGETMARDGVLAP 356 Query: 337 VAAALIPVIL 346 + + ++ Sbjct: 357 Y-SVWLADVV 365 >gi|191172497|ref|ZP_03034037.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300993119|ref|ZP_07180205.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|190907165|gb|EDV66764.1| putative permease, YjgP/YjgQ family [Escherichia coli F11] gi|300305134|gb|EFJ59654.1| hypothetical protein HMPREF9553_04259 [Escherichia coli MS 200-1] gi|324011925|gb|EGB81144.1| hypothetical protein HMPREF9533_04083 [Escherichia coli MS 60-1] Length = 356 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 97/344 (28%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + +K + + + L + M L+A S+S R Sbjct: 240 ANVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRLKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + ++ + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|301028100|ref|ZP_07191378.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|312965942|ref|ZP_07780168.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|299878817|gb|EFI87028.1| putative inner membrane protein [Escherichia coli MS 196-1] gi|312289185|gb|EFR17079.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|313646462|gb|EFS10924.1| hypothetical protein SF2457T_5377 [Shigella flexneri 2a str. 2457T] gi|323171707|gb|EFZ57353.1| hypothetical protein ECLT68_3916 [Escherichia coli LT-68] gi|323176176|gb|EFZ61768.1| hypothetical protein ECOK1180_4866 [Escherichia coli 1180] gi|323181995|gb|EFZ67406.1| hypothetical protein ECOK1357_4673 [Escherichia coli 1357] gi|323189857|gb|EFZ75135.1| hypothetical protein ECRN5871_1644 [Escherichia coli RN587/1] gi|327250207|gb|EGE61926.1| hypothetical protein ECSTEC7V_5011 [Escherichia coli STEC_7v] gi|332083262|gb|EGI88493.1| hypothetical protein SB521682_5141 [Shigella boydii 5216-82] gi|332083699|gb|EGI88917.1| hypothetical protein SD15574_5322 [Shigella dysenteriae 155-74] gi|332087092|gb|EGI92226.1| hypothetical protein SB359474_4825 [Shigella boydii 3594-74] gi|332748941|gb|EGJ79364.1| hypothetical protein SFK671_4980 [Shigella flexneri K-671] gi|332749216|gb|EGJ79637.1| hypothetical protein SF434370_4579 [Shigella flexneri 4343-70] gi|332749777|gb|EGJ80190.1| hypothetical protein SF274771_5047 [Shigella flexneri 2747-71] gi|332763114|gb|EGJ93357.1| putative transmembrane possibly involved in transport conserved inner membrane protein [Shigella flexneri 2930-71] gi|333009259|gb|EGK28715.1| hypothetical protein SFK218_0006 [Shigella flexneri K-218] gi|333011251|gb|EGK30665.1| hypothetical protein SFK272_0204 [Shigella flexneri K-272] gi|333011932|gb|EGK31317.1| hypothetical protein SFK304_5276 [Shigella flexneri K-304] gi|333012148|gb|EGK31530.1| hypothetical protein SFK227_5241 [Shigella flexneri K-227] Length = 335 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|222085453|ref|YP_002543983.1| permease protein [Agrobacterium radiobacter K84] gi|221722901|gb|ACM26057.1| permease protein [Agrobacterium radiobacter K84] Length = 391 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 116/363 (31%), Gaps = 15/363 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + Y + L LL + +++ + + N + + SI A LA +P Sbjct: 1 MKLFETYIVRRVGMMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATLILPT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G ++ P ++ +I + +F+ V N Sbjct: 60 IIPVVLPFALVIGITQTLTAMNSDSELTVMEAAGARRSIIIRPIMILAIAISVFSFFVDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + + + + +I + ++ Sbjct: 120 MVEPKARVAARQMVAEAYADLLSTVIEEKNFRRIEDGLYVQITQRMSGRILKGLF---VV 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGF 237 + D +I+ + ++ ++ +S + ++ Sbjct: 177 DSRDPAFDLIYYAKEGAVDASGSSLLMRDGEVHRKTSDGDVSVIKFDSYSFDLSDMTQSR 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + + RS ++ ++ ++ + + + LI+ ++ Sbjct: 237 GQATLRAGDRSLGFLLNP-DPNDADYKAKPSGYRSELHRRLTDWALPAIFALISLVIA-G 294 Query: 298 FSRSNQPRII--VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA-LIPVILTISLSILI 354 +RS++ + + + F L + + I ++I + Sbjct: 295 DARSHREARLHPMVSALTIAFALRWADFYAAN--QIETAPYFVGILYGINIAATLIAIFL 352 Query: 355 LLQ 357 L + Sbjct: 353 LFR 355 >gi|323157530|gb|EFZ43639.1| hypothetical protein ECEPECA14_0587 [Escherichia coli EPECa14] Length = 335 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMCTLWNTDTDRARAELNWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|312973921|ref|ZP_07788092.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|310331455|gb|EFP98711.1| conserved hypothetical protein [Escherichia coli 1827-70] Length = 335 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQNYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|88810478|ref|ZP_01125735.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] gi|88792108|gb|EAR23218.1| permease YjgP/YjgQ [Nitrococcus mobilis Nb-231] Length = 357 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 28/317 (8%), Positives = 84/317 (26%), Gaps = 16/317 (5%) Query: 32 DLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVIS 91 L + + L + + ++P + ++ L R SE+ Sbjct: 24 RLIRFLADAAS-GDIPANLLFTLLGLKALANLGTVLPASFFLAIVMAMGRLYRDSEMAAL 82 Query: 92 RAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIP 151 A G+ +L ++ ++ L + + E ++ + + + Q Sbjct: 83 AACGVGPRELCRALLLLAVPLALLVGYLSLVFGPWAEGTAQRIVAEAQQSNRLQGVRPGR 142 Query: 152 WMQISNPQQDIFIGAKKILPENH-IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK 210 ++ + ++ + H I+ + + L Sbjct: 143 FLDLGAGSAVAYVASIDAEGIMHGIFARAEQDGQPVLIAAARARREVDPETGARFLVLLN 202 Query: 211 VVEYQYGRIPIDKNSTTLNIPIKM---DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 YQ +FS + +++ + + + Sbjct: 203 GQRYQGVPGQRAWRVIRFGQHGLSLGGSEPAQFSAARDGLTSWQLWHSEDRAAWAQL--- 259 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 + + +PL+ + +TL A +S R + + + + + ++ + + Sbjct: 260 -------QWRLSMPLVTLVLTLFALPLSKSAPRDGRYAK-LLSAVLVYVLYFNLLKVAQG 311 Query: 328 FGKSGILLPVAAALIPV 344 G Sbjct: 312 LLSQGRYPVGLGLWWVH 328 >gi|297182283|gb|ADI18452.1| predicted permeases [uncultured Oceanospirillales bacterium HF4000_13G19] Length = 354 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 113/350 (32%), Gaps = 18/350 (5%) Query: 16 TTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVN 75 TT+ ++++ + + + ++ A R+P +Q I+P + Sbjct: 2 TTVLVTFILVMVLVSGRFIKYLAEAAAGQ-IAADALFLVMAFRLPEFLQMILPLSLYIAI 60 Query: 76 IVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLI 135 ++V ++ +E+V+ RA G +++ +V +++ L + G+ + Sbjct: 61 LLVLGRMHMDNEMVVLRAGGQGDGRVVRSLIVPALVAMSVIALFALYVTPQGDAEVNRIF 120 Query: 136 QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK------ 189 ++ K + + + A+ + E + E+ ++ Sbjct: 121 EEQKGRSVLELLTPGRFHVKGDDDNQRATYAESLNREEGVLENVFVADASFSSEEAGRLL 180 Query: 190 -IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 + R + ++L +YQ D G ++ S + Sbjct: 181 TVWARSGNLVQQDGISYLELTDGYQYQGKPGEADYREVAFEKARVRIGSERSSSRPPEVR 240 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + + + + + L + M L A +S R + + + Sbjct: 241 GRSTLDLIDDGGNQAMAELA-------WRWSLVLTVPIMCLAAVPLSRVNPRQGR-FLRM 292 Query: 309 AYGIFSGFMLYTIITIMKSFGKS--GILLPVAAALIPVILTISLSILILL 356 + + ++ M+S+ G P +++ + L ++ +L Sbjct: 293 IPAVLGYMLYVGLLLTMRSWIAEVPGSERPWYYSMVWIHLIAGFAVFMLY 342 >gi|255020899|ref|ZP_05292955.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] gi|254969690|gb|EET27196.1| Predicted permease [Acidithiobacillus caldus ATCC 51756] Length = 372 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/305 (12%), Positives = 104/305 (34%), Gaps = 3/305 (0%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + L+ ++ L + ++ + L+++ +Q+ + L P ++ ++P Sbjct: 8 ILRDLLRVFVFGCLLVLGILAIGQLSQLLSQVAS-GQLPLGVTLQLLGLATPTLLVTVLP 66 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 +VF NL R++E++ R+ G+S+ LL + +++ + L+ + + + Sbjct: 67 LAFFFALYLVFSNLYRSNEMMAIRSAGLSLLDLLRALALPILVIALLEALLSLSWSPAAQ 126 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + + + + + +I +++G E+ E F + + Sbjct: 127 RQLQAESLRLANAAAEALIQPGSFARI-AGGHILYVGQSAPGSEHRYREIFVDLGGKGEP 185 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 I ++ + + L + ++Y P L+ Sbjct: 186 DIATAAFGEIRKDQDGGIALVLIQGHRYLGQPGTAGFKILSFVHYRIALAAPQGSSDQGI 245 Query: 249 FYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + R + + ++ PL++ + L+A ++ R Sbjct: 246 HWAALDLPQVLQALREPRYARHALAELEWRLIWPLLIPVLALLAIPLAFGGPRGAGRASG 305 Query: 308 VAYGI 312 GI Sbjct: 306 ALLGI 310 >gi|261401002|ref|ZP_05987127.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] gi|269209119|gb|EEZ75574.1| permease, YjgP/YjgQ family [Neisseria lactamica ATCC 23970] Length = 371 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/352 (9%), Positives = 106/352 (30%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L + + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWIIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 MPWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K + + + Sbjct: 180 QDKNGNDNIIFAKEGNFSLNDNKRTLELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + L V L+L + + + + Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVSVLLLCLLAVPLSYFNPR----GG 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ ++G + L I+ ++++++L Sbjct: 296 HTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILL 347 >gi|86151428|ref|ZP_01069643.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153749|ref|ZP_01071952.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315123881|ref|YP_004065885.1| hypothetical protein ICDCCJ07001_285 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841775|gb|EAQ59022.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842710|gb|EAQ59922.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|307747250|gb|ADN90520.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] gi|315017603|gb|ADT65696.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 352 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 101/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKLQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|146329237|ref|YP_001210036.1| hypothetical protein DNO_1152 [Dichelobacter nodosus VCS1703A] gi|146232707|gb|ABQ13685.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 349 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 30/347 (8%), Positives = 95/347 (27%), Gaps = 13/347 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +RY + L + + ++ + + ++ + + S++ L + I+ Sbjct: 5 IFYRYMMREISALFLAITMILLTIIISFRFSSLLSRALD-GSVSLAAIGQLLIFQTANIV 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P ++ +++ L E+ A G S L+ P + + L + V+ + Sbjct: 64 VILLPVAFILASVMTLSRLYGDCEINALFAGGCSKKHLMQPILYLVLPLAVILVINTLYL 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L+ Q + + ++ + I + Sbjct: 124 LPHVFERWDQLMAQSRQEALYSFFTPNQFQHLNAHNTLYTGDKINNGFQPFIIIQNDNNE 183 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + + + Sbjct: 184 YSMLWSKRGEIQKNQPEHFLHLTQGNRAAWRD-----------DFQPQNCLFSQFAHGSL 232 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S+S +++ + + +F + L +V + ++ R + Sbjct: 233 HLSQSPPSAQQRLRSIATGALNQSLAHRAEFQKRLNPALAVVIFSFAVPLLAHTRPRQGR 292 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + ++ I G + ++ I G + + + Sbjct: 293 YQRLLPAFILFG-IYINLLDIALKMFSRGQIPFLIGGWGIHFAAAFI 338 >gi|283955738|ref|ZP_06373229.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792693|gb|EFC31471.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 1336] Length = 352 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/354 (11%), Positives = 102/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCVYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I+ M++ I+ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAIVTFIAFVVTLMIWGILFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|238023199|ref|ZP_04603625.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] gi|237865582|gb|EEP66722.1| hypothetical protein GCWU000324_03126 [Kingella oralis ATCC 51147] Length = 368 Score = 69.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/358 (10%), Positives = 113/358 (31%), Gaps = 13/358 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + ++ + + + ++ L + Sbjct: 2 IYHRQFIKETTLTAIAIFFVVLAILVFTQGINMLGRAAD-GRVAVDAVTTLIGFWTLGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ I + G+ + + + P + ++ L + + + Sbjct: 61 PLLLVLTAYISTLTVLTRYWRDSEMAIWLSSGLGLKKWIRPVLTFALPLAVLVATMQISV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE--NHIWEDFTS 181 E + + K + + ++ ++ Sbjct: 121 LPWAEYRSREYAEILKQKQNLSLVQAGTFSELGKKDGRVYFVETFDTDNGIMKNLFIRDI 180 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + + + ++ + L Y D + + + + ++ K Sbjct: 181 DETGRDSVVFAKEGRFDLSNNKRTLVLTNGYRYSGIAGRGDFDQVSFQELNLIINTTPKV 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + R + + N + + + + + +P+ ++ ++L+A +S +R Sbjct: 241 VDPIDHRRTIPTAQLI-------GSSNPQYQAELMWRVSLPITVLLLSLLAIPLSYFNTR 293 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S V + + +T+++ + G + L+P+ L + I +LL+ Sbjct: 294 SGN-SYHVLLAVGFFLVYQNGLTLLRDAVEDGKINFWLG-LLPMHLLMIACIWVLLRM 349 >gi|291296717|ref|YP_003508115.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] gi|290471676|gb|ADD29095.1| permease YjgP/YjgQ family protein [Meiothermus ruber DSM 1279] Length = 338 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 105/354 (29%), Gaps = 19/354 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + L L +L + + DL + + + A RVP + Sbjct: 2 LPRYLLRETLSLYLLGVLLFVG-LITFDLLSSLSGAFLRARTPVGEIVQMVAYRVPHTLG 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + +V R SEL + A GI + P ++ ++ +G +L + Sbjct: 61 IALPLGLVFALLVALARWIRQSELKAAYAAGIPPRVFIGPVLLLALAVGAVVLLNEGWLK 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ L + + + + PQ A++I P + Sbjct: 121 PIAQERFEALQYKIYYGSEPS---GVLTERTYTPQGLGIYYAQRIYPPPEGQTGSRLEGV 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 A+ + + +L+ + L P+ + E Sbjct: 178 RVVESGGSVWSAERGVWVSGAWRLQNAYRVDPSGQIFQEAEHPLPFPVGVQPKAVSYEAL 237 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + A+ + V + +A + L S Sbjct: 238 RMPEL-----------HAVASADPAAQFPLARRYANAVGTVVLAWLAIVIGLSLRES--- 283 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + F +T+ T+ F + +L A +P I+ L++L + Sbjct: 284 AWAFIAVVGLIFGYWTLFTLSAQFARFDLLGAY-GAWLPNIVYGGLALLGTWRL 336 >gi|86149085|ref|ZP_01067317.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597305|ref|ZP_01100540.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218561972|ref|YP_002343751.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840443|gb|EAQ57700.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190366|gb|EAQ94340.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112359678|emb|CAL34464.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925585|gb|ADC27937.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315928386|gb|EFV07700.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930530|gb|EFV09573.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 352 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 101/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FASAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|171059277|ref|YP_001791626.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] gi|170776722|gb|ACB34861.1| permease YjgP/YjgQ family protein [Leptothrix cholodnii SP-6] Length = 364 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 109/356 (30%), Gaps = 11/356 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 K ++ L+ + +V + L Q L S +L + ++ Sbjct: 7 LRKELSRSFGGTLIVILTIVLTMMLIRTLGQAA-LGRVSPQDVVLLLGYTSLGHLPTMLC 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 V + + SE+ I A G+S+ + + P V + F ++ + Sbjct: 66 LSLFVAVVSTLTRMYGDSEMTIWFASGVSLTRFVRPVVRFGTPIVFFVAALLLFVWPWSN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI---WEDFTSITID 185 + +L +++ D + + SN Q+ FI + D Sbjct: 126 RNISELRGRYEQRSDLSRVAPGQFQTSSNGQRVFFIDKQSPDAGTGRNIFILDQRVDRES 185 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + R D A + ++ L + + D + + A Sbjct: 186 VTSAQTGRIDLPDADDTHRRLVLDNGARTDLDLKGETR------TISRFDQYSIRISEKA 239 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 E K S + + + + + + + L + + L+ ++ RS Sbjct: 240 LTRIDEPPPKARSSFDLLLSSDPKVRAELAWRVGMVLGGINLMLLGLGLAQGGPRSGS-G 298 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + + S + + +I++ +++ S L A L +L + G Sbjct: 299 WTLLLALLSFVVYFNLISLSQAWVASARLSLGTALASVHGGVFVLCAALLWWRVRG 354 >gi|157414610|ref|YP_001481866.1| hypothetical protein C8J_0290 [Campylobacter jejuni subsp. jejuni 81116] gi|157385574|gb|ABV51889.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni 81116] gi|315931610|gb|EFV10576.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 352 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 101/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|194364315|ref|YP_002026925.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] gi|194347119|gb|ACF50242.1| permease YjgP/YjgQ family protein [Stenotrophomonas maltophilia R551-3] Length = 360 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 40/361 (11%), Positives = 108/361 (29%), Gaps = 11/361 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY ++++ L L+ +++ L +I + + + Sbjct: 1 MLK-LDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIAD-GRLPAKLLFSQLGLQFI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ +LL P ++ + + Sbjct: 59 AYLPLILPLALMLGLLLAVARLYRDSEMAVITAIGVGPKRLLRPLLMLVLPVVALVGACS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ +I + + + + + N Sbjct: 119 LWLGPWAGRVAEQMIIEANRSVLMAGLEPGRFTPLPNGGVVYLSSISPDGTRLGRVFLQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ++L + + L + D Sbjct: 179 QKDDRLEVVSAAGGRMFFEGARQRFLELDDGHQVEGPVAGGL--DYRLATFARNDVALPD 236 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 Q + + E++ + A+ Q + + PL+ +A L+ + R Sbjct: 237 GAQTRTENDPELMPTTKLFGDA----RPEAQAQLHRRLAPPLIALAFALLTVPLGRSSPR 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + ++ + + + ++ I + +G + + + L+I + D Sbjct: 293 QQRYGRMM-LALLAYMVGTNLMFIGSGWIATGKIPAALGLWWLTLPLLGLAIWM--YARD 349 Query: 361 G 361 G Sbjct: 350 G 350 >gi|309378516|emb|CBX22869.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 371 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 32/352 (9%), Positives = 106/352 (30%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L + + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWIIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 MPWAELRSREYAEILKQKQELSLVEAGRFNTLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + N+ + ++ + K + + + Sbjct: 180 QDKNGNDNIIFAKEGNFSLNNNKRALELRDGYRYSGTPGKADYNRVSFRHLSLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + L V L+L + + + + Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVSVLLLCLLAVPLSYFNPR----GG 295 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ ++G + L I+ ++++++L Sbjct: 296 HTYNILIAIGLFLIYQNGLTLLFEAVENGKIHFWLGLLPMHIIMFAVALILL 347 >gi|323162060|gb|EFZ47932.1| hypothetical protein ECE128010_1825 [Escherichia coli E128010] gi|332346340|gb|AEE59674.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 335 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|323166625|gb|EFZ52384.1| hypothetical protein SS53G_3091 [Shigella sonnei 53G] Length = 335 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 103/311 (33%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + ++ RA + + I + Sbjct: 190 DFRITDFQDYQAIIGHQAVVLDPNDTDQM-----DMRTLWNTDTDRARAELNWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|86133416|ref|ZP_01051998.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] gi|85820279|gb|EAQ41426.1| predicted permease YjgP/YjgQ family [Polaribacter sp. MED152] Length = 483 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 62/187 (33%), Gaps = 3/187 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L + L + ++ + L + + S+ + Sbjct: 1 MKILDKYILKSFLVPFIATFLIVLFVLVMQALWQAFENIAGK-GISVIFILKFLYYTTLM 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II Q +P L+ +I+ NL E +++ G+S+ +L+ P + +I L L +N Sbjct: 60 IIPQALPIGVLLSSIMALGNLGENYEFAAAKSAGVSLQRLVRPIGILAIALSGLNFLFLN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +L K + +K E ++ + Sbjct: 120 NVFPYANLKQRNLYLNIKKKKPALALVPGSFNADIP--GYQIKFDEKYGEEENLLKKVWI 177 Query: 182 ITIDKKN 188 + Sbjct: 178 YDLTSNR 184 Score = 49.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 1/93 (1%) Query: 262 SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI 321 N +T++Y + L V + I A + R + + I + + Sbjct: 357 WNRKMVNFYDTEYYNRVAFSLSCVILFFIGAPLG-SIIRKGGFGLPMILAIAVYVLYFFT 415 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 T K+ + + + + I IL I L+IL+ Sbjct: 416 NTFGKNLAEESSITSILGSWISAILMIPLAILL 448 >gi|333010222|gb|EGK29655.1| hypothetical protein SFVA6_0010 [Shigella flexneri VA-6] Length = 335 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|313680813|ref|YP_004058552.1| permease yjgp/yjgq family protein [Oceanithermus profundus DSM 14977] gi|313153528|gb|ADR37379.1| permease YjgP/YjgQ family protein [Oceanithermus profundus DSM 14977] Length = 346 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 106/347 (30%), Gaps = 15/347 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L RY + L L ++L+ L E+ + +S A RVP Sbjct: 1 MNTLSRYLLREVGAYLLGGLAVVVLLLLGGVLFEVLAPLLARGADPLS-IGQYLAHRVPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + +P L ++ + SEL + A GI ++L V LL + + Sbjct: 60 ALVRGLPIAYLFALLLALSRMAEDSELKVLLASGIPRERVLGVLVGFGALLALVGFVAGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++++ + + + + + D Sbjct: 120 SWVPRELQRANQVLREAILAKPRALLQPGTFFRDAYGRTIYVGQV-----------DGQG 168 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + A ++ L + + + + ++ Sbjct: 169 FGDVRVLSEGEVLTAKRGRFEPGRLVLDAGMRVTFDGSRPRTITEFERGLLPLEDLAVSP 228 Query: 242 E-QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + A E+ ++++ K ++ T ++ P VA L A +++ Sbjct: 229 PTKPADLPLAELRRRIAEYKKFGRPYHAE-ATAYWRKWAEPAASVAFALFAVALAFWML- 286 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 + + + F Y ++ + G+ G+L P AA P +L Sbjct: 287 GGSRSLGMVGVVTLTFFYYATWSVFRIMGEQGVLAPWFAAWGPDLLY 333 >gi|309784106|ref|ZP_07678748.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|308928099|gb|EFP73564.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 335 Score = 68.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAIILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|312795337|ref|YP_004028259.1| hypothetical protein RBRH_03151 [Burkholderia rhizoxinica HKI 454] gi|312167112|emb|CBW74115.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 365 Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 105/354 (29%), Gaps = 11/354 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL R + T L + LV + I VL + + Sbjct: 2 ILERSLQRELAYTAGAVFLVLLTLVLTTMMIRIVG-FAASGQIDPRDVVVLIGLTMISYV 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V R SE+V+ + G+S+ +L+ P + + + Sbjct: 61 AVMLIATLFVSILFVLTRWYRDSEMVVWLSCGVSLTRLIKPIATFAAPIVVLIAFFAFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI-SNPQQDIFIGAKKILPENHIWEDFTSI 182 + + ++++ + + + +N + ++ Sbjct: 121 WPWANEQSKLIRERFQQRDEVSLLAPGQFRESAANHRVFFIEKMSPDQGRVENVFVTSTE 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + ++ + V L+ Y D ++ Sbjct: 181 NGKVNVVVSKTGHTEIHPNGDRFVVLENGRRYDGEPGKPDFRIMEFARYGVKIQSRQLVN 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + S + N +F + +PL + + L+A ++ + R Sbjct: 241 RPTTTSLP--------TATLLREPNPTHLAEFAWRAGLPLTALNLMLLAIPLAYQNPRRG 292 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + I + + ++ +++++ + G + V L ++ ++ + + Sbjct: 293 RT-INLVLAVLIYLTYSNLMNLVQAWIEQGKVAFVPGLLGLHVIVSAIVVFVFW 345 >gi|78776668|ref|YP_392983.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] gi|78497208|gb|ABB43748.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] Length = 359 Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 115/348 (33%), Gaps = 6/348 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 ++Y +Y++ + LL ++ + D ++ + S + + + I Sbjct: 4 FKYITFHYIRYFIIILLALVLFLVGFDYMGNTEKL----DISANLFLIYVVYKTFYAIDM 59 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV-INPIA 124 ++P + I L R++ LV ++G S +L PFVV + + + + Sbjct: 60 LLPLSLIFAMISTKIFLIRSNALVSFYSLGYSRIDILKPFVVVATAMITLFISLHSISNF 119 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ ++ + + + + + + + + D + + Sbjct: 120 ARADEFAKNIRKNAQYLSPTRDLFFTYKDKFVYFSKLLPLQESAENIRVFSFVDNSLKEV 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + +R DA L + + K + G K++ + + + E Sbjct: 180 LVAKRASYRNDAWLIKMADIITKPDDISFDSLGIKVTQKDNLEILQGFRPKMLDQVYEGK 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + I NI + ++ Y + V P + ++ +I R Sbjct: 240 VNFSIKDAIDAYWLLRDQNI-NTNIVKSALYKIFVYPFFVPSLVVIIFFFVPVSVRFLNV 298 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I S M++ + + + ++P +L ++ Sbjct: 299 SLFSFAAIISSLMIWAFLFSLVELSNHKTIPSELGIVLPNLLLFLFAL 346 >gi|193214339|ref|YP_001995538.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] gi|193087816|gb|ACF13091.1| permease YjgP/YjgQ family protein [Chloroherpeton thalassium ATCC 35110] Length = 455 Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 1/149 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K ++ ++ + + + L ++ ++ L ++ + Sbjct: 3 ILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGK-GLEMNVIIELIVLQIAWMA 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 P L+ ++ F N+ +SE+ RA GIS+ +++ P +V +L N + Sbjct: 62 VLAAPMAVLISTLMTFGNMVNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNIV 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 L+ + + Sbjct: 122 LPEANHQAKVLLMDISRAKPSFGLEENVF 150 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 22/227 (9%), Positives = 62/227 (27%), Gaps = 14/227 (6%) Query: 142 GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAII 201 + S + + + EN I ++ I + ++ Sbjct: 218 NPENHSYRRVNFETHKVVFEATGYGFERTDENSISRGDRELSATTMMDICDSLEERVSKS 277 Query: 202 YNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSN- 260 Y+ + + R P +S I D + R + + + ++ + Sbjct: 278 YSAINDTRDAELSRIMRTPTGYDSLPHAASIVPDSLDILANIPPKRRYSVLDRAITQARV 337 Query: 261 ------------KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 SN + + + IP + + + + +R I Sbjct: 338 HLNEAHHQYFSINSNTRLINKYLVEVHKKYAIPFACLFFVFVGVPLGV-LARRGGFGIGA 396 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + + + + I+ P A + ++ + ++L Sbjct: 397 GLSLIFFLLYWVFLIGGEKLADRDIVSPAIAMWMGNVVISVIGAVLL 443 >gi|194333657|ref|YP_002015517.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] gi|194311475|gb|ACF45870.1| permease YjgP/YjgQ family protein [Prosthecochloris aestuarii DSM 271] Length = 444 Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 55/151 (36%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K + L+ L + + + + + + + L ++ Sbjct: 1 MKIVDRYILKAHAAPFLFAFLTIIFVFTLQFFSLFIARFVGK-GLDLLVISELILLQISW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P LV ++ F NL SE+ + R+ G+S+ +++ P ++ + +L N Sbjct: 60 MVVLAVPMAVLVSTLMAFGNLTNRSEIAVMRSGGLSMSRVILPVLIAASVLAFLVERFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + L++ + Sbjct: 120 VVLPEANYQAKMLLRDITKTKPSFGLTENAF 150 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 8/96 (8%), Positives = 32/96 (33%), Gaps = 1/96 (1%) Query: 262 SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI 321 ++ + +++ + + L+ A + + R + + + + + Sbjct: 340 ADRRMYNKYMVEYHKKYALSFACIIFVLVGAPLGVLAKR-GGFGVGAGLALAFFVLYWAL 398 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + +L P A + IL + + + Sbjct: 399 LILGEHLADRNLLHPGFAMWLANILMAFIGGVAYWR 434 >gi|205356037|ref|ZP_03222805.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346161|gb|EDZ32796.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 352 Score = 68.6 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 102/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I+ M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAIVTFVAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|291277020|ref|YP_003516792.1| inner membrane protein OxaA [Helicobacter mustelae 12198] gi|290964214|emb|CBG40063.1| putative integral membrane protein [Helicobacter mustelae 12198] Length = 354 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 115/354 (32%), Gaps = 6/354 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 + Y + + + L I ID + +Q N + A + Sbjct: 2 FFYLGRQFFRFILIVFSALEIFFISIDSLKYLDQFPSSANL----IVLFFAYDFLYALNY 57 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P L+ I+ + NL ++++ A+G + Q+L P S+ V + Sbjct: 58 TLPISILLATIIFYLNLVKSNQYTAFLALGYTRKQILAPVFFISLTFTFLYVGLNATPFV 117 Query: 126 SGEKIGIDLI-QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 ++ ++ Q+ N + + + I + + + + + Sbjct: 118 YAQERAEAIMSQENFTNITEDLLVKYENNYVYFQKLYPLIKRAENIKVFELDKQGRLQSF 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + I + + + ++ + G + + + + + Sbjct: 178 AQAKDAIFLHNYWVLSHASISKVPEETTLGKAGLEVSEVDKLKILKGFRPKILDTIYQNK 237 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S S + I+ + ++ ++ + Y I+IP + ++I + SR + Sbjct: 238 PSVSIIDAIQSLIIL-QNQDSNSEKIRAILYAFILIPFFVPLTSIIIGFYAPTLSRYSNL 296 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ I +++ + SG+L P LIP L LS+ + Sbjct: 297 ALLGFMFIVLALVIWGLFFAFGKLSISGLLPPEIMMLIPFGLLCVLSLFYFKKI 350 >gi|311747143|ref|ZP_07720928.1| membrane protein [Algoriphagus sp. PR1] gi|126578851|gb|EAZ83015.1| membrane protein [Algoriphagus sp. PR1] Length = 604 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 2/154 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L + ++ L L ++ +++ + +++ L + V Sbjct: 1 MKK-LDKLILGSFIGPFLLTFLVVDFILLTVNMLKYFDEIFGK-GLDFWIYMELISYFVI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I +P L+ +++ F NL EL ++ GIS+ + + V I+L L Sbjct: 59 SISPMALPLAVLLSSLMTFGNLGEHFELTAIKSSGISLIRAMRSIGVFVIVLSFAAYLSN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ 154 N + L+ + + Sbjct: 119 NHLVPKVNLKTFSLLYDIRMKSPALDIKEGVFYN 152 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 1/147 (0%) Query: 209 KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNY 268 +KV+ + ++ G SR+ ++ Sbjct: 425 EKVIRTKPLTAEEKAKIDSVMFGKNYIGNAITIASNNSRNLKNSFDVKKAQIDTDEREYR 484 Query: 269 RAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSF 328 R E +Y + M +I A + + + V I + Y + + + Sbjct: 485 RYEISWYQKYTQAFACIVMFMIGAPLGAIIKK-GGLGMPVLISIIFFIVYYMLTMTGEKW 543 Query: 329 GKSGILLPVAAALIPVILTISLSILIL 355 K GI+ P+ + I + L Sbjct: 544 AKEGIIDPLIGTWFSNLCLIPFGLFFL 570 >gi|269467941|gb|EEZ79676.1| permease [uncultured SUP05 cluster bacterium] Length = 373 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 108/354 (30%), Gaps = 12/354 (3%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + L + ++VF L + NQ +S L + ++ + I+ Sbjct: 2 RNVLVMLSAVFIIIGLVVFGNQLVLVINQ-SLKEGIPVSDLLPLISFKMIRDVPLILSLS 60 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 + I+ L + SE ++ ++G+ Q + I + IF + + + Sbjct: 61 LFLAIILSVSRLYKDSEAIVMNSLGLGDKQFMLFIQPIVIAIFIFILFLTTYAVPWSKHQ 120 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 ++ + ++ + + + + + K E E N Sbjct: 121 RNMVMDRTENASEFSFIKEGEFQEFKDGDVVFYASKVKAGGELGQQEMEEIFIYTLSNDE 180 Query: 191 IHRKDADLAIIYND------KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 A A Y D ++LK Y +K ++ + Sbjct: 181 SIITLAKQANKYTDGITKSVYLRLKDGTRYHGFPGDTNKKILNFDLYDLKIIDGDKEKTK 240 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + E + + + P+ ++ ++++ + R + Sbjct: 241 DTIVKVEGQDTFDLFRSDGLKEVSE----LQWRLSQPISVLILSILGILLGKSSPRGGKN 296 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + V +G+ + + + KS + G + P+ +L + + + L + Sbjct: 297 -LGVLFGVVVFILYNNALLVAKSNLEQGSVHPIVGLWWVHLLMVLIIFIFYLYR 349 >gi|325499819|gb|EGC97678.1| hypothetical protein ECD227_3916 [Escherichia fergusonii ECD227] Length = 335 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 103/311 (33%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKGVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ GI + + + +++ + K N + Q +N +F Sbjct: 70 AAMILALFTGIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSAVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + + RA + + + + Sbjct: 190 DFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMTTLWNTDSDRARAELNWRLTLIFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I + Sbjct: 304 NLIYLALAIAL 314 >gi|315057734|gb|ADT72063.1| Permease YjgP/YjgQ [Campylobacter jejuni subsp. jejuni S3] Length = 352 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 101/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|114704779|ref|ZP_01437687.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] gi|114539564|gb|EAU42684.1| hypothetical protein FP2506_07581 [Fulvimarina pelagi HTCC2506] Length = 398 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 116/357 (32%), Gaps = 8/357 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY F+ L +++ L+ ++V+++ + + + + +A +P + Sbjct: 3 LLERYIFRRALISSVGSLVSLALIVWIVQALSRID-IVKTSASAAGNILWIALMLLPDLA 61 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++PF L+ I V LN SE + A G S+ +L P + + GI + V + I Sbjct: 62 AGVVPFAILIGAIQVLNGLNADSERAVIAASGASMRVILRPIIYLGLAGGILVLTVAHGI 121 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + I+ + + ++S + + E+ +D Sbjct: 122 GPLASSAFYNGIRSINVDTITLFLRPGRFERVSPDLVISVGESNGSIIESLFIQDTR--D 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + + + L + L ++ + + + ++ Sbjct: 180 PNLDLTYFAAEASILDQGDQSVLMLFDGQLHRKPKTGNSVSVIEFQTYAFDLSNLRPADD 239 Query: 244 FASRSFYEIIKKM----SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 E+ ++ R + L VA L A + + Sbjct: 240 GDWTRTSELSTLTLIAPDPDDEIYQKKPGRYVEEATDRFTSWLYCVAFALWAIVCAGQPQ 299 Query: 300 RSNQPR-IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + Q + G+ L + + S + + L+P+ + ++LI+ Sbjct: 300 TNRQASNAAMTLGLAGAVALKAVAFLALSMVSPNPSMAIFVYLLPIAACVFNALLIM 356 >gi|241203949|ref|YP_002975045.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857839|gb|ACS55506.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 393 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 116/356 (32%), Gaps = 5/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G L+ P ++ + + +F+ V N Sbjct: 60 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAAISVFSFFVDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-ISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +I + + + + + I + + D Sbjct: 120 VVEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADER 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D I+ +S + ++ + + Sbjct: 180 DPAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTPDGNVSVINFDSYSFDLSDMTENRGQA 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + R + +I ++K + + + ++ V L + +++ +R Sbjct: 240 TLRASDRDLWFLINP-DPADKDYTIRPQSYRAELHRRLTDWILPVVFALFSLAIA-GDAR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA-LIPVILTISLSILIL 355 S++ + + + + A I++ +SI+ L Sbjct: 298 SHREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVFL 353 >gi|289209274|ref|YP_003461340.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] gi|288944905|gb|ADC72604.1| permease YjgP/YjgQ family protein [Thioalkalivibrio sp. K90mix] Length = 386 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 103/352 (29%), Gaps = 7/352 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R+ + T + ++++ L + + E + + A I + Sbjct: 23 RFIARELWLTQAAVSVVLLLVIIGGVLARVLRDVAE-GRLPVDFLPGMVAFGAFKGIVFL 81 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 P + ++VF + R SE+ +A G+S L + I ++++ + Sbjct: 82 WPVALFLAFMLVFGRMQRDSEMTALQASGMSFAALYRALFWVAAPAAILLLVLMTMVVPR 141 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 E L + D +++ Q F + E F +D Sbjct: 142 TEAQIDQLRDLAEQRSDLVGIAPGRFLRSRVGDQVFFAERMSA-DREALLEVFIYREVDG 200 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + +I + A L Y+Y P + L + Sbjct: 201 EAQITVAERAVPDPGAEGSGFLLLENGYRYVGEPGTASFRMLEFERLRTQITEPDPGTRR 260 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 S + A + + + +PL ++ + L+A ++ R+ + Sbjct: 261 ASLNAQPTPA----LWAQRDDPEARAELEWRLAMPLSILVLALLALPLAQVPPRTGRYA- 315 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + I + + + + G L + L +++ K Sbjct: 316 RIPAAIGVYVLYANFLILGQGQLADGRTPLALGLWWAHGLMLVLWVVLAWHK 367 >gi|297171529|gb|ADI22527.1| predicted permeases [uncultured Oceanospirillales bacterium HF0500_09M11] Length = 354 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 112/350 (32%), Gaps = 18/350 (5%) Query: 16 TTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVN 75 TT+ ++++ + + + ++ A R+P +Q I+P + Sbjct: 2 TTVLVTFILVMVLVSGRFIKYLAEAAAGQ-IAADALFLVMAFRLPEFLQMILPLSLYIAI 60 Query: 76 IVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLI 135 ++V ++ +E+V+ RA G +++ +V +++ L + G+ + Sbjct: 61 LLVLGRMHMDNEMVVLRAGGQGDGRVVRSLIVPALVAMSVIALFALYVTPQGDAEVNRIF 120 Query: 136 QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK------ 189 ++ K + + + A+ + E + E ++ Sbjct: 121 EEQKGRSVLELLTPGRFHVKGDDDNQRATYAESLNREEGVLESVFVADASFSSEEAGRLL 180 Query: 190 -IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 + R + ++L +YQ D G ++ S + Sbjct: 181 TVWARSGNLVQQDGISYLELTDGYQYQGKPGEADYREVAFEKARVRIGSERSSSRPPEVR 240 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 + + + + + L + M L A +S R + + + Sbjct: 241 GRSTLDLIDDGGNQAMAELA-------WRWSLVLTVPIMCLAAVPLSRVNPRQGR-FLRM 292 Query: 309 AYGIFSGFMLYTIITIMKSFGKS--GILLPVAAALIPVILTISLSILILL 356 + + ++ M+S+ G P +++ + L ++ +L Sbjct: 293 IPAVLGYMLYVGLLLTMRSWIAEVPGSERPWYYSMVWIHLIAGFAVFMLY 342 >gi|257459022|ref|ZP_05624141.1| permease YjgP/YjgQ [Campylobacter gracilis RM3268] gi|257443407|gb|EEV18531.1| permease YjgP/YjgQ [Campylobacter gracilis RM3268] Length = 348 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 108/356 (30%), Gaps = 10/356 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +Y YLK L+ ID+ N + A + Sbjct: 1 MKLYVKYAALSYLKYFFILLIALECFYVGIDVLTNLKDFPSSAN----TALLYIALTAAV 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P + I++ FN+ R++ELV A+G+S L+ P + ++ + + + + Sbjct: 57 ALSYTLPLSLIFALILMGFNMIRSNELVSFYALGVSKNALIIPPFLIALAITASFIALNS 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 K +L GD ++ I ++ + Sbjct: 117 TPFAYALKFQKNLTDLSPTGGDMFLKFEGKYIYIKALNGKNANDITIFNIGDNSVASRSH 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + N ++ G + Sbjct: 177 ASSGE-----YAGKIWHLRDVNTTTLPTQLKLGGSGLKSKLSAQSEALKGFDPSSIASVY 231 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S + ++ + + + + + Y +I PL L+ R Sbjct: 232 DTSNVYSIRDALRSIRTFSHQGV-NISTIKASLYNMIFFPLFAPLAVLVLYYYLPVTGRF 290 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 ++ + + ++ ++ F +G+++P ++P+I + + ++ + Sbjct: 291 FNLALLSFGFFIATLCAWGVLFVLIRFSLNGVIIPEFGIIVPIIALLGFAAFLVFK 346 >gi|116251335|ref|YP_767173.1| hypothetical protein RL1569 [Rhizobium leguminosarum bv. viciae 3841] gi|115255983|emb|CAK07064.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 393 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 116/356 (32%), Gaps = 5/356 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G L+ P ++ + ++ +F+ V N Sbjct: 60 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVISVFSFFVDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-ISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +I + + + + + I + + D Sbjct: 120 VVEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISQRMAGRMLKGLFVADER 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D I+ +S + ++ + + Sbjct: 180 DPAYELIYYAKEGAVDDTGTTLIMHQGEVHRKTPDGNVSVINFDSYSFDLSDMTESRGQA 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + R + + ++K + + + ++ V L + +++ +R Sbjct: 240 TLRASDRDLWFLFNP-DPADKDYTIRPQSYRAELHRRLTDWILPVVFALFSLAIA-GDAR 297 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA-LIPVILTISLSILIL 355 S++ + + + + A I++ +SI+ L Sbjct: 298 SHREARLHPMVSALAYAFAMRWAAFYAANQIDTDPEYIAVLYAIPIVSSIVSIVFL 353 >gi|301048205|ref|ZP_07195241.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300299963|gb|EFJ56348.1| conserved hypothetical protein [Escherichia coli MS 185-1] Length = 356 Score = 68.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/347 (11%), Positives = 95/347 (27%), Gaps = 18/347 (5%) Query: 2 PGILWRYFFK---YYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 ++ Y + + + FL+ ++ + + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFFFARYSAQRYLTE----AANGTLALDVVLDIVFYK 56 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 V + ++ ++P V + SE+ A G S +L + +I L IF L Sbjct: 57 VLIALEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTL 116 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 + L QQ + D ++ + N + + + Sbjct: 117 LSMYGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALI 176 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGF 237 +TS + D V L Y D N N+ + ++ Sbjct: 177 YTSTANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPL 236 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + +K + + + L + M L+A S+S Sbjct: 237 DQSPNVK---------RKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRV 287 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + ++ + ++ + ++ +G + + + Sbjct: 288 KPRQGRFSTLLPLTLLF-VAIFYGGDVCRTLVANGAIPLIPGLWLVP 333 >gi|145219916|ref|YP_001130625.1| permease YjgP/YjgQ family protein [Prosthecochloris vibrioformis DSM 265] gi|145206080|gb|ABP37123.1| permease YjgP/YjgQ family protein [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY K ++ + L + ++ + ++ L A + Sbjct: 1 MKLIDRYILKAHVGPFFFAFLTIIFVLILQFFASFADRFIGR-GIGFGALVELIALQSAW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P L+ ++ F L TSE+ + RA G+S+++L+ P ++ ++L F N Sbjct: 60 MVGLAAPMAVLIAVVMAFGALTTTSEMTVFRASGVSLYRLMIPILLAGLVLSFFVERFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + L+ + Sbjct: 120 VVQPLANYQARSLMDDIVKAKPNFGITENAF 150 Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 36/98 (36%), Gaps = 1/98 (1%) Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 + N R +++ + L+ A + + +R I +F + Sbjct: 334 NRDVNQGMVNRFMAEYHKKYALAFACFFFVLVGAPLGI-LARRGGFGIGAILSLFFFVLY 392 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + ++ + G+L P AA + + ++ + +++ Sbjct: 393 WILMIAGEKMAVRGVLEPWAAIWMADAVMAAIGLTLVI 430 >gi|325295268|ref|YP_004281782.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065716|gb|ADY73723.1| permease YjgP/YjgQ family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 361 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 113/354 (31%), Gaps = 11/354 (3%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I+ RY F L+ + L + ++ + + I + SI + +P Sbjct: 4 KIIHRYIFLEILRVFILTLGLFIFVILMDRASSIAETVFG-QGVSILNFLSVLVKGIPAF 62 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + IP ++ ++VF L +ELV ++ G+S +L P + + I + + Sbjct: 63 LGMTIPMAFILSVLIVFIQLGNNNELVALKSCGVSTKELSKPVIFLGVAFSILSFYSLMF 122 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + I++ + S+ + +K+ PE E+F Sbjct: 123 LMPKSNVAMKKEIEELVKKKITMSISPKNF---SSNFPGVTFYVEKLYPEKGYLENFMVS 179 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + K I + D V L + + Sbjct: 180 LVKKDELITIFAKKGMLRTEKDTVFLDIQDGTGEFINWKKPENFKVLNFKNYTVKLYRFT 239 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + + A+ + + + + L + + ++A S++L RS+ Sbjct: 240 KREKFESIRY----KTLPELISSNRIEAKVELFKRLGLSLAPLIVGILAFSLALIIPRSS 295 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 I+ + + Y + T+ K + + V L+ + L + + Sbjct: 296 IGIGILLS-LLIIVVYYILYTLTKKIALNTGI--VLLPLLTDLFFFVLGGFLYI 346 >gi|194336947|ref|YP_002018741.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309424|gb|ACF44124.1| permease YjgP/YjgQ family protein [Pelodictyon phaeoclathratiforme BU-1] Length = 441 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K ++ + L+ + + ++ + ++ + L + Sbjct: 1 MKIIDRYILKAHVGSFLFAFVTIIFVLILQFFATFADRFMGK-GIGFTAMVELILLQSAW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ P LV ++ F +L TSE+ + RA GIS+++L+ P ++ +LL +F N Sbjct: 60 MVGLAAPMAVLVSVVMAFGSLTTTSEMTVFRASGISLYRLMMPVLLAGLLLSLFVERFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + L+ + + Sbjct: 120 VVLPEANYYAKSLMVDIARSKPAFGLAENAF 150 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 46/128 (35%), Gaps = 2/128 (1%) Query: 228 LNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM 287 + + + + + R + ++ +N R ++ + L Sbjct: 304 MITAKMANKTRAEAAGYVDRQLARLDGELKNIE-ANRNMYNRYMAAYHKKYALSLACFVF 362 Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 L+ A + + +R + A +F + + ++ + + GIL P+ + + + Sbjct: 363 VLVGAPLGV-LARRGGFGVGAAISLFLFVLYWMLMISGEKIAERGILDPMISMWLANAVM 421 Query: 348 ISLSILIL 355 ++ I ++ Sbjct: 422 ATVGISLM 429 >gi|320335816|ref|YP_004172527.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] gi|319757105|gb|ADV68862.1| permease YjgP/YjgQ family protein [Deinococcus maricopensis DSM 21211] Length = 371 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 90/334 (26%), Gaps = 11/334 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + L + L ++L DL + + + + +L T+VP ++ Q + Sbjct: 31 YVLREVLPLYVVGALVFLLLT-TTDLISGVVGILLSYHPTPRQAWLLYVTQVPRLLNQSL 89 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 +V F L + SEL + A G+ L P ++ + L+G F + Sbjct: 90 ILAIPFAVLVGFGRLAKDSELKATAAGGVRPLNLAWPLLLPAALIGAFVFYNGAYLTPQA 149 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + T + Sbjct: 150 QAQWNTAWFSVYRQAPPPPVTTTYTYAQDGTLFSASRVETPQGATVANLTGVLVQTPTE- 208 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 L + P + + T + D + + A Sbjct: 209 ---TITASTGSWDARAKTWTLPGGWVVRGDARPAEFH--TPRTFPQRDEIARPTPPPAES 263 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + E+ +++ S + N+ + + A+++ L Sbjct: 264 TLPELRAELA-SGRLNVQERRTYQFNIARRYADAFTALGFAFAASALGLMV---RNRAWA 319 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 V +F Y + + + SG L P AA Sbjct: 320 VTNVVFLILGFYIVWSTVPQLAGSGALPPNLAAW 353 >gi|254521723|ref|ZP_05133778.1| permease YjgP/YjgQ family protein [Stenotrophomonas sp. SKA14] gi|219719314|gb|EED37839.1| permease YjgP/YjgQ family protein [Stenotrophomonas sp. SKA14] Length = 360 Score = 67.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 39/362 (10%), Positives = 107/362 (29%), Gaps = 13/362 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L RY ++++ L L+ +++ L +I + + + Sbjct: 1 MLK-LDRYLLGDFVQSFLATLIVLLVVSVGGVLVDILGNIAD-GRLPAKLLFSQLGLQFI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ +LL P ++ + + + Sbjct: 59 AYLPLILPLALMLGLLLAIARLYRDSEMAVITAIGVGPKRLLRPLLMLVVPVVLLVGACS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ +I + + + + + N E Sbjct: 119 LWLGPWAGRVAEQMIIEANRSVLMAGLEPGRFTPLPNGGVVYLSSISPDGTELGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ-YGRIPIDKNSTTLNIPIKMDGFQK 239 + ++L + + +D T Sbjct: 179 QKDDRIEVVSAAGGRMFFEGARQRFLELDDGHQVEGPAAGGLDYRLATFARNDVALPDGA 238 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + ++ + + Q + + PL+ +A L+ + Sbjct: 239 QTRTEDDPELMPTLQLIGDGRPQA-------QAQLHRRLAPPLIALAFALLTVPLGRSSP 291 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 R + ++ + + + ++ I + +G + + ++LSI + Sbjct: 292 RQQRYGRMM-LALMAYMVGTNLMFIGSGWIATGKIPAALGLWWLTLPLLALSIWM--YAR 348 Query: 360 DG 361 DG Sbjct: 349 DG 350 >gi|315617675|gb|EFU98281.1| conserved hypothetical protein [Escherichia coli 3431] Length = 335 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 SDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSNFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQDYQAIIG-----HHAVALDPNDTDQMDMRTLWNTDTTRARAELNWRITLIFT 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ ++L+I++ Sbjct: 304 NLIYLALAIVL 314 >gi|261364965|ref|ZP_05977848.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] gi|288566762|gb|EFC88322.1| permease, YjgP/YjgQ family [Neisseria mucosa ATCC 25996] Length = 371 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 MPWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + + K + + + Sbjct: 180 QDKNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTSQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T +++ + G + L I+ ++++++L Sbjct: 297 T-YNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLL 347 >gi|261377636|ref|ZP_05982209.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] gi|269146390|gb|EEZ72808.1| permease, YjgP/YjgQ family [Neisseria cinerea ATCC 14685] Length = 371 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 113/352 (32%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 MPWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK K + ND + + K + + + Sbjct: 180 QDKNGKDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTSQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T +++ + G + L I+ ++++++L Sbjct: 297 T-YNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLL 347 >gi|255066291|ref|ZP_05318146.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] gi|255049501|gb|EET44965.1| permease, YjgP/YjgQ family [Neisseria sicca ATCC 29256] Length = 371 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFALLIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 MPWAELRSREYAEILKQKQELSMVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + + K + + + Sbjct: 180 QDKNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGKADYNRVSFQNLSLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTSQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T +++ + G + L I+ ++++++L Sbjct: 297 T-YNILVAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFAIAVVLL 347 >gi|241760314|ref|ZP_04758409.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|319637672|ref|ZP_07992438.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] gi|241319192|gb|EER55670.1| permease, YjgP/YjgQ family [Neisseria flavescens SK114] gi|317400827|gb|EFV81482.1| hypothetical protein HMPREF0604_00061 [Neisseria mucosa C102] Length = 371 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 110/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + F Sbjct: 121 MPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 N I + ++K L+ Y+Y P + ++ + Sbjct: 181 DKNGNDNIVFAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSLIISTTPKL 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S I SN H + I + + ++ + L+A +S RS Sbjct: 241 IDPVSHRRTIPTAQLIGSSNPQHQAE----LMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T +++ + G + L I+ +++++L Sbjct: 297 T-YNILIAIGLFLVYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLL 347 >gi|329894348|ref|ZP_08270218.1| putative permease [gamma proteobacterium IMCC3088] gi|328923144|gb|EGG30467.1| putative permease [gamma proteobacterium IMCC3088] Length = 372 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 110/361 (30%), Gaps = 15/361 (4%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY + L T L ++VF + E + + A + +P + Sbjct: 2 LIVRYLTRDILVNTSAVSLVVFLVVFSSQFVRRLADVAE-GDLAAGFLASIMFFSIPSYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P V ++ L SE+V+ A GI W LL +V ++ I + + + Sbjct: 61 ELILPLGFFVGLMLALGRLYTDSEMVVLSASGIGPWHLLRWVLVSGAVVAILSAGLSLGL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS-NPQQDIFIGAKKILPENHIWEDFTSI 182 + ++L+ + + + + S + Sbjct: 121 TPWTKTKVLNLVTEASNEKGLAAFVPGRFQRRSGGFDTFYAESVESDQQGLKGLFVAEQG 180 Query: 183 TIDKKNKIIHRKDADL------AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 ++ A+ ++L YQ ++ T + + Sbjct: 181 MSSAGEPLVTITYAERGRVVSSQEHGGRYLELLNGRRYQGQPGQLEYRVTEFEVLGERLP 240 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + Y+ + +N ++ + + LM + +A ++ Sbjct: 241 DADSAGSAFGDDLYDALPTQMLFLDNNSAST----ATLHWRLSLVLMPFNLAFLALGLAR 296 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + +++ + L + ++ + + + + + + ++LL Sbjct: 297 TDRRRGRYTMLLPAIVLYLVYLVGLASLRGAAAEGASVG---SLWGLHAVIAGIGCVVLL 353 Query: 357 Q 357 Sbjct: 354 W 354 >gi|153951775|ref|YP_001398642.1| hypothetical protein JJD26997_1652 [Campylobacter jejuni subsp. doylei 269.97] gi|152939221|gb|ABS43962.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 352 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 39/354 (11%), Positives = 102/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSFYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + DF + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDFNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAHFEGESWILRDGNIALLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y I P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDALKINLYKFIFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAFVTFIAFVVILMVWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|121730353|ref|ZP_01682711.1| bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) [Vibrio cholerae V52] gi|121627894|gb|EAX60475.1| bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) [Vibrio cholerae V52] Length = 233 Score = 67.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 73/233 (31%), Gaps = 3/233 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADVSD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 ++ D+ + + + L Y+ +D T + + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGL 233 >gi|261379717|ref|ZP_05984290.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] gi|284797387|gb|EFC52734.1| permease, YjgP/YjgQ family [Neisseria subflava NJ9703] Length = 371 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 110/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + F Sbjct: 121 MPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVYFVETFDTESGIMKNLFLREQ 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 N I + ++K L+ Y+Y P + ++ + Sbjct: 181 DKNGNDNIVFAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSLIISTTPKL 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S I SN H + I + + ++ + L+A +S RS Sbjct: 241 IDPVSHRRTIPTAQLIGSSNPQHQAE----LMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T +++ + G + L I+ +++++L Sbjct: 297 T-YNILIAIGLFLVYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLL 347 >gi|57237364|ref|YP_178377.1| hypothetical protein CJE0358 [Campylobacter jejuni RM1221] gi|57166168|gb|AAW34947.1| membrane protein, putative [Campylobacter jejuni RM1221] Length = 352 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 102/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAYFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDALKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I+ M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAIVTFMAFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|121612521|ref|YP_001000023.1| hypothetical protein CJJ81176_0335 [Campylobacter jejuni subsp. jejuni 81-176] gi|87250256|gb|EAQ73214.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] Length = 352 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 102/354 (28%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK + IDL + + N + L+ + VP Sbjct: 3 IFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY-- 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 61 --VLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTS 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + D + Sbjct: 119 FAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 ++ + N + K G D + K + + Sbjct: 179 FVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASN 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + + Y + P + LI +R Sbjct: 239 SDYSISDALESF--ELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I+ M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 297 LAIVTFVTFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 350 >gi|154246777|ref|YP_001417735.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] gi|154160862|gb|ABS68078.1| permease YjgP/YjgQ family protein [Xanthobacter autotrophicus Py2] Length = 405 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 58/153 (37%), Gaps = 1/153 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G L RY F L ++ +++ + + +I + + +P Sbjct: 1 MGRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLD-LVTSQGQTIIAFVAITSLTMPT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P + LN SE+V+ + G+ W+LL P ++ ++L+ F L+ Sbjct: 60 LVLVIAPAALFIATAYTLLKLNGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ 154 + + + + + + + + ++ Sbjct: 120 KVVPASLATFREQVTKVRADVVSFVAQPGRFVN 152 >gi|320088911|emb|CBY98669.1| Lipopolysaccharide export system permease protein lptG [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 158 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 1/146 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKS 147 +A GE++ + Q G Sbjct: 123 WVAPQGEQMARNYRAQAMYGGFAAFH 148 >gi|313157781|gb|EFR57192.1| permease, YjgP/YjgQ family [Alistipes sp. HGB5] Length = 500 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 75/249 (30%), Gaps = 4/249 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + + K YL + M ++ + + +++ S L + Sbjct: 1 MKTIHKLVLKAYLGPMVLTFFIVMFVLMMNIVWRYIDELVGK-GLSAGIIIELMTYFMAN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +P L+ I+ NL EL+ ++ G+S+ ++ P ++ L+ + + + N Sbjct: 60 MIPLGLPLAMLLAAIMTMGNLGENYELLAMKSAGMSLIRITKPLIILVSLISVGSFFIGN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K ++ + + + + + H + + Sbjct: 120 NLVPYANKKVFSILYDIRQQKQSLEFQDGLFFNGIDNMSIRVSRQEPETHLLHDVLIYDN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKV---KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + I + + + K L Y+ R + L I Q Sbjct: 180 RAANGDMNTIVADSGYIRLSDDKKYLLVTLFNGETYEQTRSSQWFTQSKLRHHIFEKQDQ 239 Query: 239 KFSEQFASR 247 + + Sbjct: 240 VIPMEGFAM 248 Score = 42.8 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 75/251 (29%), Gaps = 3/251 (1%) Query: 109 SILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKK 168 +L+ +F +S L + D+ M ++ Q K Sbjct: 204 YLLVTLFNGETYEQTRSSQWFTQSKLRHHIFEKQDQVIPMEGFAMGRTDANQFSNSQTKN 263 Query: 169 ILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL 228 I H + + + + ++ V + D + Sbjct: 264 INELQHDIDSLEKMVNSATTRSYEPLLKEQIFSRDNSVLPQPDSLRIDKSRFRDMAAMDS 323 Query: 229 NIPIKMDGFQKFSEQFASR--SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 ++M ++ Q + + + + K + YR++ +++ + +P+ ++ Sbjct: 324 IATLQMREKERVWNQARTLAKNSRNMFSFDESAAKEALNQLYRSKVEWHKKMSLPVSIMI 383 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 LI A + R + V I + Y I + K G V + + Sbjct: 384 FVLIGAPLGA-IIRKGGLGLPVVVSIIFFVIYYIISLSGEKLAKEGSWDAVYGMWLSTFI 442 Query: 347 TISLSILILLQ 357 ++I + + Sbjct: 443 LTPIAIYLTYK 453 >gi|254672902|emb|CBA07219.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 210 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 2/156 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN 157 +A + + ++ NG + W++ N Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGIWLKEKN 154 >gi|152981611|ref|YP_001354150.1| hypothetical protein mma_2460 [Janthinobacterium sp. Marseille] gi|151281688|gb|ABR90098.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 376 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 111/356 (31%), Gaps = 9/356 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + L T + + L I Q + S L + Sbjct: 2 IFQRALRRDLLSTAGAVFTTLFTITITVTLIRILGQAAG-GKIASSDVVALLGFSALNYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V ++V + SE+V+ A G+S+ + + P ++ + + T ++ + Sbjct: 61 PILLNLTGFVAVLLVVTRSYQDSEMVVWFASGLSLAKWIQPVLMFGLPIVTLTAVLSLFL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF-IGAKKILPENHIWEDFTSI 182 + +++ + D + + + S+ + F G + + + Sbjct: 121 TPWSNEQSAVYKERYANREDIARVSPGKFQESSSSDRVFFVEGVSGDSTKVKNIFVSSVL 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + ++ + + + + Y D + + Q + Sbjct: 181 NGKTSVVVAKEGTVEIDQAGDKFLVMHQGRRYDGIPTQSDFELMEFDRYGVLVATQSKAL 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + K++ + + + + + + +PLM + + L+A + R Sbjct: 241 VGDTSARATSTKELLSNRNN------FNDGEILWRVSLPLMGILLMLLAIPLGFVNPRGG 294 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + +F +++ ++ + A ++ + + + + Sbjct: 295 RSA-NLLIALFLFVFYSNMLSFAQATVVQNRSTLMLAWWPVHLVALIVVAVFFTWR 349 >gi|15893268|ref|NP_360982.1| hypothetical protein RC1345 [Rickettsia conorii str. Malish 7] gi|15620488|gb|AAL03883.1| unknown [Rickettsia conorii str. Malish 7] Length = 378 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 129/358 (36%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 24 KYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLPTLLFIL 81 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P I ++ I ++ NL +L+I +A G++ QL P + ++++ + + + I Sbjct: 82 LPVIMVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSNILPL 141 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + K+N + + + + ++ ++ ++ D Sbjct: 142 SHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNP 201 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S+ + ++ + + + V + +S + + + Sbjct: 202 SVVFAGSGTLNIYDNSPIFELNKGIRQEYDV---NGNLTQLTFDSLMIKLQNDNPLVSQR 258 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + Y I + ++ + I + + + I+ PL + +A +V L + Sbjct: 259 TKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPY 318 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + +L T I + S L + A +++ +++ + + ++K Sbjct: 319 SKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 376 >gi|325132745|gb|EGC55428.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M6190] Length = 396 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 85 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 86 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 145 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 146 IPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 204 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 205 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 264 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 265 LIDPVSHRRTIPTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 321 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 322 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 372 >gi|152993636|ref|YP_001359357.1| hypothetical protein SUN_2059 [Sulfurovum sp. NBC37-1] gi|151425497|dbj|BAF73000.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 361 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 119/349 (34%), Gaps = 7/349 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +RY K+Y+K L L G ID + ++ NY I + + Sbjct: 11 FRYLAKHYIKNLLAILFGLSFAFAAIDYFQYTEELQGSWNYKILYIFYMWQ----EALGL 66 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P + I+ + + + A G + +L +P V + L + + + Sbjct: 67 LYPLAIVFAVIMTKLTFVKQNTMGALHAFGYTKKRLFSPVFVIASLTYAVFIYLHTTEFS 126 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + L++ +D+ + K + I++ Sbjct: 127 YAKDKANMLLKNQVH--AYNVNDMFFKYNDTFVYIKKLNPIVKKIKGITIFKVAGYQVRY 184 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + + + I N VK + R +D+ + + + + Sbjct: 185 TIKAPVAVFNGEEWIAQNATVKTHIYQNGELVRYSMDQKESIATLHGYKPKIIESLYEGK 244 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + + + + + Y +++PL +A+ LI +R Sbjct: 245 ALNIIDAYNTWKLLEIQ-HLDSDKIRATIYNKVIVPLFALALLLILFFKLPFHARMMNFG 303 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++VA+ + F+++ ++ ++ G +G+L P A++P++L +I + Sbjct: 304 VVVAFSLGVTFLIWGVLFGLEQIGLNGVLKPEFTAVMPIVLLWLYAIYV 352 >gi|170766592|ref|ZP_02901045.1| putative permease [Escherichia albertii TW07627] gi|170124030|gb|EDS92961.1| putative permease [Escherichia albertii TW07627] Length = 335 Score = 67.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 101/311 (32%), Gaps = 6/311 (1%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 + + L VP + Q I+P + ++ L SE+ + A G+S L+ Sbjct: 10 GDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVK 69 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 ++ ++ I + + + +++ + K N + Q +N +F Sbjct: 70 AAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF 129 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 I + ++ + + ++ L + + + ++ + + Sbjct: 130 IESVDGSNFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLR 189 Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + + RA + + I + Sbjct: 190 DFRITDFQDYQAIIG-----HQAVALDPNDTDQMDMRTLWNTDTTRARAELNWRITLIFN 244 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + M L+ +S+ R + + + + + + I T +KS G G L P Sbjct: 245 VFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV 303 Query: 344 VILTISLSILI 354 ++ + L+I++ Sbjct: 304 NLIYLVLAIVL 314 >gi|203284704|ref|YP_002222444.1| hypothetical protein BDU_816 [Borrelia duttonii Ly] gi|203288236|ref|YP_002223251.1| hypothetical protein BRE_819 [Borrelia recurrentis A1] gi|201084147|gb|ACH93738.1| uncharacterized conserved protein [Borrelia duttonii Ly] gi|201085456|gb|ACH95030.1| hypothetical protein BRE_819 [Borrelia recurrentis A1] Length = 402 Score = 67.4 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 115/352 (32%), Gaps = 9/352 (2%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 + F L T L+ +IL+ + DL E N SI+ + +P Sbjct: 51 DKIFVNNILLTFLFMNFLFVILIVLFDLLTNLLNYLE-HNLSINDIIYIYYLYLPKCFSD 109 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + L + NL+ +E++ + GISI ++L ++ S+ + + N + Sbjct: 110 GVALSFLFAVSNLLGNLSMRNEIIGLFSCGISIARILRSIIMLSVFVSVILFFFDNYLVV 169 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ N +II K+ E HI + I D Sbjct: 170 DTVAERDAFLKNNIGNQGANDRNIII-----KDFAREIYNIKRFDVETHIITNLMIILKD 224 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + + R D A + K L V E+ + + + + + + + Sbjct: 225 QDDNFKKRYDISKAEWVDSKWMLYGVREFYKVELDVIEKFYEVLDGENIVNLEPGYIKII 284 Query: 246 SRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S + K+ I N + L+ + L++ +VS + Sbjct: 285 MLSSKTLNFSKLVTWIGDLIKENLNYSDALFDLLNRIFFSFRLILLSFTVSFVSLFLKKN 344 Query: 305 RII--VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + I + I + G L A+ +P IL I ++ +I Sbjct: 345 IFIWSLLNSIAFAVVYVISIMVFNFLADLGYLSIFIASSLPTILFIIINFVI 396 >gi|238651117|ref|YP_002916975.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] gi|238625215|gb|ACR47921.1| hypothetical protein RPR_07620 [Rickettsia peacockii str. Rustic] Length = 369 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 130/358 (36%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 15 KYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLPTLLFIL 72 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ I ++ NL +L+I +A G++ QL P + ++++ + + + I Sbjct: 73 LPVITVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSNILPL 132 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + K+N + + + + ++ ++ ++ D Sbjct: 133 SHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNP 192 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S+ + ++ + + + V + +S + + + Sbjct: 193 SVVFASSGTLNIYDNSPIFELNKGIRQEYDV---NGNLTQLTFDSLMIKLQNDNPLVSQR 249 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + Y I + ++ + I + + + I+ PL + +A +V L + Sbjct: 250 TKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPY 309 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + +L T I + S L + A +++ +++ + + ++K Sbjct: 310 SKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 367 >gi|161870424|ref|YP_001599597.1| hypothetical protein NMCC_1472 [Neisseria meningitidis 053442] gi|161595977|gb|ABX73637.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 432 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 63 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 121 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 122 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 181 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 182 IPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 240 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 241 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 300 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 301 LIDPVSHRRTIPTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 357 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 358 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 408 >gi|213423383|ref|ZP_03356371.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 285 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 92/269 (34%), Gaps = 6/269 (2%) Query: 86 SELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQ 145 SE+ + A G+S L+ +V ++ GI + + K +++ + K N Sbjct: 2 SEITVMHACGLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMA 61 Query: 146 KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDK 205 + Q +N +FI + + ++ + + ++ L + + Sbjct: 62 ALAQGQFQQATNGSSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGS 121 Query: 206 VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF 265 + ++ + ++ + + + Sbjct: 122 QVVTLNKGTRFEGTALLRDFRITDFQNYQAIIG-----HQAVALDPNDTDQMDMRTLWNT 176 Query: 266 HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM 325 N RA + ++ I + + M L+ +S+ R + + + + + + I T + Sbjct: 177 DNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTSI 235 Query: 326 KSFGKSGILLPVAAALIPVILTISLSILI 354 KS G G L PV ++ ++L+I + Sbjct: 236 KSNGGKGKLDPVIWMWAVNLIYLALAIGL 264 >gi|157804262|ref|YP_001492811.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] gi|157785525|gb|ABV74026.1| hypothetical protein A1E_05575 [Rickettsia canadensis str. McKiel] Length = 360 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 125/355 (35%), Gaps = 5/355 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 6 KYFIKNILPLLIVVTFSVTSIVWITQVLKLLYLFDK--GIKVMDFFSLIVLVLPTLLFIL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ I ++ NL +++I +A G+ QL P + ++++ + + + I Sbjct: 64 LPVITVIAVIYIYNNLKVERQIIILQASGVHNVQLALPALYVALIVMLLAYYISSTIMPL 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + K+N + + +++ N + + Sbjct: 124 SHINLKSRLSFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNL 183 Query: 187 KNKIIHR---KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D + I+ L++ + + NS + + + ++ Sbjct: 184 SVVFADSGTLNIYDNSPIFELNKGLRQEHDINGNLTQLTFNSLMIKLQNDNPLIPQRTKH 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + Y I + ++ + + + + + I+ PL + +A +V L + S + Sbjct: 244 NKEANEYYISELLAPPHDLAVTKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPYSKK 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + +L T I + S L + A +++ +++ + + ++K Sbjct: 304 TTFMPVLFSALTVLLVTSIHFILQNFASKNLNFIFACYSNLVIALTIGLYLFVRK 358 >gi|157965014|ref|YP_001499838.1| putative permease [Rickettsia massiliae MTU5] gi|157844790|gb|ABV85291.1| Putative permease [Rickettsia massiliae MTU5] Length = 370 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 44/364 (12%), Positives = 131/364 (35%), Gaps = 11/364 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + +YF K L + +V++ + ++ + + L +P Sbjct: 10 MILLYRKYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLP 67 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ ++P IT++ I ++ NL +L+I +A G+ QL P + ++++ + + Sbjct: 68 TLLFILLPVITVITVIYIYNNLKVERQLIILQASGVDNVQLALPALYVALIVMLLAYYIS 127 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENH 174 + I + K+N + + + + ++ ++ ++ Sbjct: 128 STILPLSHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDN 187 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 D S+ + ++ + + + + V + +S + + Sbjct: 188 RNADNPSVVFAGSGTLNIYDNSPIFELNKGRRQEYDV---NGNLTQLTFDSLMIKLQNDN 244 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + ++ + Y I + ++ + I + + + I+ PL + + +V Sbjct: 245 PLVSQRTKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVTLAV 304 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 L + S + + +L T I + S L + A +++ +++ + + Sbjct: 305 FLRYPYSKKTTFMPVLFSALIVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYL 364 Query: 355 LLQK 358 ++K Sbjct: 365 FVRK 368 >gi|67459766|ref|YP_247390.1| permease [Rickettsia felis URRWXCal2] gi|67005299|gb|AAY62225.1| Predicted permeases [Rickettsia felis URRWXCal2] Length = 369 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 129/358 (36%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 15 KYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLPTLLFIL 72 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ I ++ NL +L+I +A G++ QL P + ++++ + + + I Sbjct: 73 LPVITVIAVIYIYNNLKVERQLIILQASGVNNVQLALPALYAALIVMLLAYYISSTILPL 132 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + K+N + + + + ++ ++ ++ D Sbjct: 133 SHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNP 192 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S+ + + + + + V + +S + + + Sbjct: 193 SVVFAGSGTLNIYDNNPIFELNKGIRQEYDV---NGNLTQLTFDSLMIKLQNDNPLVSQR 249 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + Y I + ++ + I + + + I+ PL + +A +V L + Sbjct: 250 TKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPY 309 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + +L T I + S L + A +I+ +++ + + ++K Sbjct: 310 SKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYSNLIIALTIGLYLFVRK 367 >gi|118602490|ref|YP_903705.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567429|gb|ABL02234.1| permease YjgP/YjgQ family protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 371 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 111/353 (31%), Gaps = 4/353 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + + ++VF L + + I+ L + + Sbjct: 17 ILARYLMRNVSVLLSVVFIVISLVVFGNQLV-LIIKETSKEGIPIADLLPLVGLNMIRDV 75 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+ L+ I+ L + SE ++ ++G+ + I++ IF ++ + Sbjct: 76 VLILSLSLLLAIILSVSKLYKASEAIVMNSLGLGDKHFMVFIQPLVIVIVIFIFILTTVV 135 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE--NHIWEDFTS 181 ++ ++++ ++ + + + N + E+ Sbjct: 136 VPWSKQQRGLIMERSENTPEFSFIKKNEFQEFKNNDIVFYASKVSDADNAKEQNMEEIFI 195 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 T+ +I + + ++ N + K+ Q Sbjct: 196 YTLVNNEPVITLAKQAQKYTNFNTNSVYLRLKNGTRYHGFPSNKNKKILNFKLYDLQIID 255 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + + +F + I PL ++ ++++ + RS Sbjct: 256 GKMQKSISTVTKVESKSTFELLFSNKLTEIAEFQWRISQPLSILILSVLGVLLGKTSPRS 315 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + V G+ + ++ I KS + G P+ ++ + L + Sbjct: 316 GKN-LGVLVGVVMFIVYNNVLLIAKSTLERGESSPIVGLWWVHLVMLLLIFIF 367 >gi|315500012|ref|YP_004088815.1| permease yjgp/yjgq family protein [Asticcacaulis excentricus CB 48] gi|315418024|gb|ADU14664.1| permease YjgP/YjgQ family protein [Asticcacaulis excentricus CB 48] Length = 384 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 108/358 (30%), Gaps = 8/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + Y + L + + + + + E S+S + +P Sbjct: 1 MRTIEGYISRQMRTPILGAIAALTAIAILSQSLTQFDVIVER-GQSLSTFLKITFLALPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I P V +V ++ E+V A G+S+W++ +P V + + + +L+ Sbjct: 60 LSGLIFPVAIFVGTLVALNRMHNDHEIVAGYANGMSLWRIASPVVRFGVYITLMGLLMTL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I + + + + + K + + + + I+ Sbjct: 120 FIQPAASRAMREELFKIKTDVIAAAVREGDFSTTPSGMTIYVQRIDQSGLLRQIFIRTPG 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR----IPIDKNSTTLNIPIKMDGF 237 + + + + L+ Q + + +I + Sbjct: 180 PHGLDRTYLAREGRVITPVKGGQVLILRDGSTQQLSPEGVLNHLTFAEYSFDISQYVISE 239 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA--SVS 295 + + R +E+ N + + + + I PL + L+A + Sbjct: 240 DYLHFKDSDRFPHELFFPNRAMEWENG-NWTKLMAEGHARISGPLYNLGFCLLAIVGVLG 298 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 FSR R I + + I + +L + + ++ + LSI+ Sbjct: 299 GAFSRQGYGRRIATVSFIAAGLRIVGFAIEAGCANTPVLNIMQYVVPVALIWVCLSII 356 >gi|332998925|gb|EGK18516.1| hypothetical protein SFVA6_3890 [Shigella flexneri VA-6] Length = 356 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 96/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPW 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|209548671|ref|YP_002280588.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534427|gb|ACI54362.1| permease YjgP/YjgQ family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 393 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 109/320 (34%), Gaps = 6/320 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 1 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G L+ P ++ + ++ +F+ V N Sbjct: 60 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-ISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +I + + + + + I + + D Sbjct: 120 VVEPRAKTVVRQMIAETYADLLSSVIEEKTFRKLDEGLYVQISKRMAGRMLKGLFVADER 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D I+ +S + ++ + + Sbjct: 180 DPAYELIYYAKEGAVDDTGTTLIMHEGEVHRKTPDGNVSVINFDSYSFDLSDMTENRGQA 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + R + ++ ++K + + + ++ V L + +++ +R Sbjct: 240 TLRASDRDLWFLLNP-DPADKDYTIRPQSYRAELHRRLTDWILPVVFALFSLAIA-GDAR 297 Query: 301 SNQPRII--VAYGIFSGFML 318 S++ + + + F L Sbjct: 298 SHREARLHPMVSALAYAFAL 317 >gi|325136763|gb|EGC59363.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M0579] gi|325208502|gb|ADZ03954.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis NZ-05/33] Length = 396 Score = 67.0 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 27 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 85 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 86 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 145 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 146 IPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 204 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 205 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 264 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S N + + + + I + + ++ + L+A +S RS Sbjct: 265 LIDPVSHRRTIPTAQLIGS---SNPQHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 321 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 322 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 372 >gi|325287934|ref|YP_004263724.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] gi|324323388|gb|ADY30853.1| permease YjgP/YjgQ family protein [Cellulophaga lytica DSM 7489] Length = 478 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 1/94 (1%) Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + + + + + A + R + + I Y + Sbjct: 354 YQRYNIHILALHSKYALAFSCIILFFVGAPLGA-IIRKGGMGLPMVIAIILFLAYYFLGV 412 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + K G + P AA IP ++ + L + + ++ Sbjct: 413 FVGNSAKVGKIPPALAAWIPTLVMLPLGVFLTIR 446 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 46/139 (33%), Gaps = 1/139 (0%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M++ + + + +P +I +++P ++ +I+ F L Sbjct: 1 MLIFIFQTIWLYIGDLAGK-GLDLEIIGKFIFYFMPSLIDKVLPLTVVLSSILTFGTLAE 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 E +A GIS+ + + ++ + LG+ N +A + +L + + Sbjct: 60 NYEFAAMKASGISLQRAMRTIIIFVLFLGVVAFFFANNVAPAAAHKIYNLKRNIGNVKPA 119 Query: 145 QKSDIIPWMQISNPQQDIF 163 + + Sbjct: 120 AIIAEGIFSDFEGMNIKVD 138 >gi|165933910|ref|YP_001650699.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] gi|165908997|gb|ABY73293.1| hypothetical protein RrIowa_1576 [Rickettsia rickettsii str. Iowa] Length = 369 Score = 66.6 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 129/358 (36%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 15 KYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLPTLLFIL 72 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P I ++ I ++ NL +L+I +A G++ QL P + ++++ + + + I Sbjct: 73 LPVIMVITVIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTILPL 132 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + K+N + + + + ++ ++ ++ D Sbjct: 133 SHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNP 192 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S+ + ++ + + + V + +S + + + Sbjct: 193 SVVFAGSGTLNIYDNSPIFELNKGIRQEYDV---NGNLTQLTFDSLMIKLQNDNPLVSQR 249 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + Y I + ++ + I + + + I+ PL + +A +V L + Sbjct: 250 TKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPY 309 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + +L T I + S L + A +++ +++ + + ++K Sbjct: 310 SKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 367 >gi|229587242|ref|YP_002845743.1| Putative permease [Rickettsia africae ESF-5] gi|228022292|gb|ACP54000.1| Putative permease [Rickettsia africae ESF-5] Length = 369 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 128/358 (35%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 15 KYFIKNILPLLIVVTFSVTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLPTLLFIL 72 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P I ++ I ++ NL +L+I + G++ QL P + ++++ + + + I Sbjct: 73 LPVIMVITVIYIYNNLKVERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSNILPL 132 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + K+N + + + + ++ ++ ++ D Sbjct: 133 SHINLKSRLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNP 192 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S+ + ++ + + + V + +S + + + Sbjct: 193 SVVFAGSGTLNIYDNSPIFELNKGIRQEYDV---NGNLTQLTFDSLIIKLQNDNPLVSQR 249 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + Y I + ++ + I + + + I+ PL + +A +V L + Sbjct: 250 TKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPY 309 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + +L T I + S L + A +++ +++ + + ++K Sbjct: 310 SKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 367 >gi|309794091|ref|ZP_07688516.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|308122498|gb|EFO59760.1| conserved hypothetical protein [Escherichia coli MS 145-7] Length = 356 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 96/344 (27%), Gaps = 12/344 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++ V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLLVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKF 240 + D V L Y D N N+ + ++ + Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQS 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +K + + + L + M L+A S+S R Sbjct: 240 PNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPR 290 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + ++ + + Y + ++ +G + + + Sbjct: 291 QGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 333 >gi|283778149|ref|YP_003368904.1| permease [Pirellula staleyi DSM 6068] gi|283436602|gb|ADB15044.1| permease YjgP/YjgQ family protein [Pirellula staleyi DSM 6068] Length = 395 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 47/395 (11%), Positives = 119/395 (30%), Gaps = 46/395 (11%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP I+ R L+ ++ + + ++ + + L L +P Sbjct: 1 MPVIV-RQVVWDILQWFTIAIVSLTVFMMLVFVGQQAR----LYGLGALAILRLIPYILP 55 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L VV+ ++ +E+V +++GIS ++ P + + LL + V + Sbjct: 56 NALAFAVPGSILFTVCVVYGRMSSDNEVVAIKSMGISPMVVVWPSLALAFLLSLVAVWLN 115 Query: 121 NPIATSGEKI-------------GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAK 167 + + G L Q +G + + + + Sbjct: 116 DVAFSWGVTGMRRVVLQSVEEICYGMLRTQRSYSGPTFQIIVKDVEGRKLIRPIMTFSEN 175 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND------------KVKLKKVVEYQ 215 +P + + + + + D I +++ ++KL+ + Sbjct: 176 NDMPAFTLRATEAELRSNLQRNTLVVVLTDCEIDFSNGARVSSPGIVEREIKLEDATHKR 235 Query: 216 YGRIPI------DKNSTTLNIPIKMDGFQKFSEQFASRSFY---------EIIKKMSFSN 260 G +S I++ ++ + + + Sbjct: 236 VGGDSPTNLPLRQISSEVELQEIEITKLEQSLAAETGMNLMTGNFFELSPDAWQPKKKKL 295 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 ++ YR T+ + +A +I +++ S+ + Y Sbjct: 296 ETARTRLYRLRTEPWRRWSNGFACLAFVMIGTPLAITLRNSDWMSTFGRCFLPILIGYYP 355 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + KSG L P + I I ++ ++ Sbjct: 356 FLAFALEKAKSGDLPPY-SIWIANIACAAVGYWLI 389 >gi|291327104|ref|ZP_06127004.2| inner membrane protein YjgP [Providencia rettgeri DSM 1131] gi|291311564|gb|EFE52017.1| inner membrane protein YjgP [Providencia rettgeri DSM 1131] Length = 343 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/330 (11%), Positives = 110/330 (33%), Gaps = 7/330 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M++ F +I N + L VP + Q I+P + ++ + L Sbjct: 1 MLIFFSQKSIDILG-AAVQGNIPSNLVLPLLGLGVPEMAQLILPLSLFLGLLMTYSKLYT 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 SE+ + A G+ L+ +V +++ + V I + + ++ K N Sbjct: 60 ESEITVMHACGLGKSVLVKAALVLAVITAMVAVANITWMLPWSSQYQEQVLADAKANPGL 119 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 + + ++IG K +++ +++ ++ + + Sbjct: 120 AAMVEGQFKTTKDGNYVLYIGDVKGSNFKNVFLAQLRAANEQRPSVVVADSGYMKEDPDG 179 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNI 264 + + +Y + ++ + + + S + + Sbjct: 180 RQVVVLNEGTRYEGTALLRDFRITDFVNYQAIVDHQTAETRSDRVEQ-----KNMLQLWS 234 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + +F++ + I +V M L+ +S R + + + + + + + + Sbjct: 235 ENTPEVNAEFHWRLTIVFSVVVMALMVVPLSEVNPRQGRV-LSMLPAMLLYLIFFLLQST 293 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILI 354 +++ G L P + + L+I++ Sbjct: 294 LRNSADKGDLDPRYTMWAVNVGYLILAIVL 323 >gi|225075102|ref|ZP_03718301.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] gi|224953586|gb|EEG34795.1| hypothetical protein NEIFLAOT_00101 [Neisseria flavescens NRL30031/H210] Length = 373 Score = 66.6 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 111/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R F K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 MPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + + + + + + Sbjct: 180 QDKNGNDNIIFAKEGNFSLNDNKRTLDLRNGYRYSGTPGRADYNRVSFQNLSLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTSQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T +++ + G + L I+ +++++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLL 347 >gi|332284928|ref|YP_004416839.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] gi|330428881|gb|AEC20215.1| hypothetical protein PT7_1675 [Pusillimonas sp. T7-7] Length = 371 Score = 66.3 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 103/322 (31%), Gaps = 7/322 (2%) Query: 41 GELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQ 100 + LA + I+ + + R SE+V+ A G+S+ Sbjct: 39 AANGTIGANVVFGLATFSSITALPVILSVSLFIAVLTTVTRNFRESEMVVWFASGLSLKD 98 Query: 101 LLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ 160 + P + ++ + I ++ + + + Q+++ D K +++ Sbjct: 99 WIRPVLRCAVPVAIIIAVLTLVASPWAYRQISEYRQRFEQRSDLSKVTAGQFIE--TEDG 156 Query: 161 DIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKD---ADLAIIYNDKVKLKKVVEYQYG 217 A++ + + + + + + + + L Y Sbjct: 157 ARVFFAEEPNEPGEEMGNVIARVVTPEWLSVVTAESARIQTEENGDRFLVLTDGHRYDLK 216 Query: 218 RIPIDKNSTTLNIP-IKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 D + +++ S A R E K + K N RA +Q + Sbjct: 217 PDMPDFRLMEFDSYGFRLESNASESSAEAVRRMAESQIKARPTLKLFTDDNDRALSQIMW 276 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 + +PL + + L+A + R + + G+ G + +I + + + SG L Sbjct: 277 RVALPLAALNLALLAIPLGAVNPRLGRSGDFLIAGL-VGLLYMNLINLSRGWIGSGQLNF 335 Query: 337 VAAALIPVILTISLSILILLQK 358 + + L ++ +K Sbjct: 336 GIGLWLVHAIFTGLMFYMMWRK 357 >gi|240113703|ref|ZP_04728193.1| hypothetical protein NgonM_09082 [Neisseria gonorrhoeae MS11] gi|268599771|ref|ZP_06133938.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268583902|gb|EEZ48578.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] Length = 396 Score = 66.3 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 112/354 (31%), Gaps = 6/354 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I R K T + + + ++ + + + +I L V Sbjct: 25 FMIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIG 83 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ + + V R SE+ + + G+++ Q + P + ++ I ++ Sbjct: 84 MTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQL 143 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E + + K + + + + ++ + E+ I ++ Sbjct: 144 WVIPWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFL 202 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK + ND + ++ + K++ + Sbjct: 203 REQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTT 262 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 263 PKLIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRS 319 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 320 GHT-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 372 >gi|320101899|ref|YP_004177490.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] gi|319749181|gb|ADV60941.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] Length = 507 Score = 66.3 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 4/160 (2%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 GIL RY + L + LL ++ + + + + +A +P Sbjct: 5 GILQRYVIRQLLGSFALALLAISSIIVLFLVMAE----AAKAGLGLDQIVQIAPYLIPGT 60 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L VV+ L +E+ +A G+S+W +L P ++ SI+L L + Sbjct: 61 LPYTVPVALLFSVTVVYGRLAGDNEITAVKAAGLSVWTVLWPCILLSIVLSGALYLAASH 120 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI 162 + +I + + N I Sbjct: 121 VIPEANHAVKRVIFSNYEQTFTTFLRRDRILNNPNWPFVI 160 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 43/106 (40%) Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 + + + +++ + ET+ I + L+ A V + F++ + + Sbjct: 396 WPEVNRAFREYDDWDYYDRKLETEKQMRIALSCGPFFFALLGAPVGILFAKRDYLSAFIT 455 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + + Y + + + GK G+L P+ A + + L+ L+L Sbjct: 456 CFLPIILIYYPLTLLGINLGKEGVLDPMIALWMGNLTLSVLAGLVL 501 >gi|257487384|ref|ZP_05641425.1| hypothetical protein PsyrptA_29193 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 148 Score = 66.3 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 1/131 (0%) Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 ++ + S S + + N R F+ ++ P + VA Sbjct: 17 RWDVALSPQLLSTVIMPPESLSISGLWNYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVA 75 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 + L+A S RS V G+ GF I ++ P+ A L+P Sbjct: 76 LVLMAISFIFGPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAA 135 Query: 347 TISLSILILLQ 357 + +L + Sbjct: 136 CALAGVYLLRR 146 >gi|197105522|ref|YP_002130899.1| hypothetical protein PHZ_c2059 [Phenylobacterium zucineum HLK1] gi|196478942|gb|ACG78470.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 386 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 107/317 (33%), Gaps = 11/317 (3%) Query: 48 ISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVV 107 + A LA VP + +P + I+V +N+ SE+ A G+S+ +L P++V Sbjct: 36 FTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALLAAGVSLTRLAAPYLV 95 Query: 108 GSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAK 167 + +L T++V + ++ ++ G + + ++ A Sbjct: 96 LAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQAD 155 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGRI------ 219 ++ V LK + ++ R Sbjct: 156 AAGQRLTRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELL 215 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 + + L + + + +E+ K ++ ++ + Y + Sbjct: 216 SFEDFTMQLPLSGPARLLRARGGDERELNLFELAK--KANDPQSVIPRETLLAELYGRLA 273 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 L L + L+A + L RS + ++ GI + +I + +SF ++G A Sbjct: 274 RALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILL-LAFHHLIQLGQSFAETGRAPAEAG 332 Query: 340 ALIPVILTISLSILILL 356 IP + ++ + L Sbjct: 333 VGIPFVAFAAICFTVFL 349 >gi|297517382|ref|ZP_06935768.1| hypothetical protein EcolOP_07050 [Escherichia coli OP50] Length = 340 Score = 65.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 97/327 (29%), Gaps = 13/327 (3%) Query: 21 LLGAMILVFVIDLNEIQNQMGELPN--YSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 ++ L+F+ Q + E N ++ + +V + ++ ++P V V Sbjct: 1 MIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIALEMLLPVGLYVSVGVT 60 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 + SE+ A G S +L + +I L IF L+ L QQ Sbjct: 61 LGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMYGRPWAYAQIYQLEQQS 120 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADL 198 + D ++ + N + + + +TS + D Sbjct: 121 QSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTSTANRTRIFRARSVDVVD 180 Query: 199 AIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 V L Y D N N+ + ++ + +K Sbjct: 181 PSPEKPTVMLHNGTAYLIDHQGRDDNEQIYRNLQLHLNPLDQSPNVK---------RKAK 231 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + + + L + M L+A S+S R + ++ + + Sbjct: 232 SVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQGRFSTLLPLTLLFIAI 291 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPV 344 Y + ++ +G + + + Sbjct: 292 FYG-GDVCRTLVANGAIPLIPGLWLVP 317 >gi|42526553|ref|NP_971651.1| hypothetical protein TDE1043 [Treponema denticola ATCC 35405] gi|41816746|gb|AAS11532.1| membrane protein, putative [Treponema denticola ATCC 35405] gi|325473491|gb|EGC76686.1| membrane protein [Treponema denticola F0402] Length = 377 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 39/368 (10%), Positives = 106/368 (28%), Gaps = 14/368 (3%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 ++ Y FK L + L + FV + + ++ +L +P I Sbjct: 9 KTIFVYVFKELLLYFIVSFLFFFFIFFVNQILLMAEEILSKK-APTKDVLLLLFYSLPFI 67 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I P+ L+ ++ + E + A+GIS +L P + + + + + + Sbjct: 68 IATTAPYAALIGTLMCLGRFSADHEFISMNALGISTSFILIPVFALGVFVSVGSFITNDI 127 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + G +++ + + + + N + + + I + Sbjct: 128 LIPRGTIKFNEVLYNIASSTPALELESYSVKRNENSIVVSGLIKDNSIHDLLIIDSSQRG 187 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK--- 239 + ++++ K I + K Sbjct: 188 AKRFLSSSQTDVKKSNDRSIIMQLEMLNPRLLNLDLNNRSKFDVVYGESITYNVLAKDVA 247 Query: 240 ----FSEQFASRSFYEIIKKMSFSNKSNIFHN---YRAETQFYFLIVIPLMLVAMTLIAA 292 S + Y++IK + ++ + + +P L+A Sbjct: 248 PKFISSSGPDKMTSYDLIKDIKQKKEAGDTSPRLLNIYIMELHRKFSVPFGAFFFVLLAF 307 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP--VAAALIPVILTISL 350 ++S ++ G+ + + + L P +L + Sbjct: 308 AIS-RAGKTYDQSTGFIVGLLISVAYWAFLIGGQMLCLESGLNINGALVMWFPNVLLVIC 366 Query: 351 SILILLQK 358 + +I +++ Sbjct: 367 TAVIAIKR 374 >gi|268594204|ref|ZP_06128371.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268595873|ref|ZP_06130040.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|293399673|ref|ZP_06643825.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] gi|268547593|gb|EEZ43011.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549661|gb|EEZ44680.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|291609924|gb|EFF39047.1| hypothetical protein NGNG_01868 [Neisseria gonorrhoeae F62] Length = 384 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 112/354 (31%), Gaps = 6/354 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I R K T + + + ++ + + + +I L V Sbjct: 13 FMIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIG 71 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ + + V R SE+ + + G+++ Q + P + ++ I ++ Sbjct: 72 MTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQL 131 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E + + K + + + + ++ + E+ I ++ Sbjct: 132 WVIPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFL 190 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK + ND + ++ + K++ + Sbjct: 191 REQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTT 250 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 251 PKLIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRS 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 308 GHT-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 360 >gi|319956049|ref|YP_004167312.1| permease yjgp/yjgq family protein [Nitratifractor salsuginis DSM 16511] gi|319418453|gb|ADV45563.1| permease YjgP/YjgQ family protein [Nitratifractor salsuginis DSM 16511] Length = 372 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 112/353 (31%), Gaps = 6/353 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P + Y ++YLK L L+G + V ID + ++ N I + A Sbjct: 4 PKRTFLYIARHYLKNFLILLIGLSLAVVFIDFLQQAQRLHGGANRKI----LYAFYTWEY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I P + L+ + + V + G Q+L PF+ +L+ + + Sbjct: 60 MVALIYPLVILMAMAWTQISFIYRNVFVSLFSFGFGRRQILIPFLASGVLIYLVFTGLQM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 G+ ++ + + + + + Sbjct: 120 TSFAYGQDRARMILHADRYKDALNNLFFKYNDSFVYASRLDPLHKALLRGMIFEVKKNQV 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ +A + K G + + L + F+K Sbjct: 180 VRTLRFDEARFHDGEWIAPRALVRSKRFDTEGELTGFEDKELKNMILLKGYRPKVFRKIY 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E + K + + Y ++ PL +AM +I + + R Sbjct: 240 EGGTFSLVDSLAAL--HLLKKQGLSADKVKAILYNKVLTPLFALAMMVIFFYRTPLYHRF 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + S + + ++ + G +G++ P +P+++ I + + Sbjct: 298 VRKEQLWTALLGSALLTWALLFALFRLGMNGVIDPDLGQTLPILILILYAWRL 350 >gi|157826358|ref|YP_001494078.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] gi|157800316|gb|ABV75570.1| hypothetical protein A1C_06735 [Rickettsia akari str. Hartford] Length = 360 Score = 65.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 130/358 (36%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 6 KYFIKNILPLLIVVTFSLTSIVWITQILKLLYLFDK--GIKVMDFFNLIVLVLPTLLFIL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ I ++ NL +L+I +A G++ QL P + ++++ + + + I Sbjct: 64 LPVITVIAIIYIYNNLKVERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTIMPL 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + K+N + + + + ++ ++ ++ D Sbjct: 124 SHINLKSHLNFIKNNYISSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNP 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S+ + + + + + V + +S + + + Sbjct: 184 SVVFAGSGTLNIYDNNPIFELNKGLRQEYDV---NGNLTQLTFDSLMIKLQNDNHLASQR 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + Y I + ++ ++ I + + + I+ PL + +A +V L + Sbjct: 241 TQHNKEANEYYISELLAPTHDLVITKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLRYPY 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + +L T I + S L + A +++ +++ + + ++K Sbjct: 301 SKKTTFMPVLFSTLTVLLVTSIHFILQNFASKNLDFIFACYSNLVIALTIGLYLFVRK 358 >gi|254672901|emb|CBA07216.1| predicted permease [Neisseria meningitidis alpha275] Length = 124 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 45/123 (36%), Gaps = 1/123 (0%) Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + S E+ + ++N + ++ +V P M L+A + + Sbjct: 1 MDVLLVKPDQMSVGELTTYIRHL-QNNSQNTRIYAIAWWRKLVYPAAAWVMALVAFAFTP 59 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + +R + + GI G + + + + P A +P I L++ ++ Sbjct: 60 QTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLAGALPTIAFALLAVWLIR 119 Query: 357 QKE 359 ++E Sbjct: 120 KQE 122 >gi|254282226|ref|ZP_04957194.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] gi|219678429|gb|EED34778.1| queuine tRNA-ribosyltransferase [gamma proteobacterium NOR51-B] Length = 389 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 113/355 (31%), Gaps = 20/355 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +Y L L + ++VF + + + + ++P + I Sbjct: 32 KYLTGDILAHALAVSVVLFLVVFSGRFIRYLAEAA-VGAITSDILLPVMLFKLPSFFELI 90 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + ++ L SELV+ +A G+ +L ++ ++ + + +A Sbjct: 91 LPLGLFIGILLSLGRLYADSELVVLKACGVGPGKLATYLLLPALAFSLVVGFLSLYLAPE 150 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 G ++ + Q+ + + + + H Sbjct: 151 GSARAQAMLDNPRSAEGLQQLSEGRFKKQRSGNFVSYAETISDDGVMHNIFVVEKSEAGT 210 Query: 187 KNKIIHRKD----ADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + D ++L+ Y+ D T ++ ++ Sbjct: 211 ARTRVTYADAGEVVVDPENGRRYLELRDGARYEGVPGQADYTVTKFKRYGEL-IPEREGG 269 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + I ++ S+ S A+ Y+ +P+++ ++LIA +S +R Sbjct: 270 IRDNLKTDAISTRLLLSDFS-----PSAQAALYWRFSLPVLVPVISLIALPLSRTDARRG 324 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI---PVILTISLSILI 354 + +A + + +T ++ +SG + ++ L++++ Sbjct: 325 RYAK-LAPALLVFLAYFIGLTQARTAVESGD-----SGWWFVGVHLIFTLLAVVL 373 >gi|307566095|ref|ZP_07628553.1| putative membrane protein [Prevotella amnii CRIS 21A-A] gi|307345283|gb|EFN90662.1| putative membrane protein [Prevotella amnii CRIS 21A-A] Length = 633 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 73/223 (32%), Gaps = 1/223 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L + K + + ++ ++ + L + + +I A + Sbjct: 4 FKKLDIFIAKQFGLLFVGTFFISLFVLMMQFLWRFVDDLIGK-GLTIDVLAQFFGYMALM 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ Q +P L+ +++ + NL +SEL +A GIS++Q + +IL+ + + N Sbjct: 63 MVPQALPLAVLLSSLMTYGNLGESSELTAIKAAGISLFQSFRGLIGITILITLLSFYFQN 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 IA +K LI K + + + + + Sbjct: 123 NIAPVAQKHLYQLIISMKQKSPELEIPEGVFYSGIPQTNLYVEKKNLKTGHLYNIMVYRM 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + II L K + + ++ D+ Sbjct: 183 TDSYEDQAIILADSGMLQSTAEKKHLVLNLWNGEWFENMRDQE 225 >gi|296315184|ref|ZP_06865125.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837908|gb|EFH21846.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 371 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 109/352 (30%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY-FVETFNTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + + + K + + + Sbjct: 180 QDKNGNDNIIFAKEGNFSLNDNKRTLDLHDGYRYSGTPGKADYNRVSFQHLSLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNP---QHRAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|153820469|ref|ZP_01973136.1| membrane protein, putative [Vibrio cholerae NCTC 8457] gi|126508986|gb|EAZ71580.1| membrane protein, putative [Vibrio cholerae NCTC 8457] Length = 225 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 23/223 (10%), Positives = 70/223 (31%), Gaps = 1/223 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A + L++Q+ + + + +FI + +++ + Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST 226 ++ D+ + + + + +Y +P + Sbjct: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYM 223 >gi|320537762|ref|ZP_08037685.1| hypothetical protein HMPREF9554_02439 [Treponema phagedenis F0421] gi|320145385|gb|EFW37078.1| hypothetical protein HMPREF9554_02439 [Treponema phagedenis F0421] Length = 377 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 111/352 (31%), Gaps = 11/352 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL+ Y K L L + FV ++ + + + +L +P+ Sbjct: 11 KKILFLYLSKELLLYFFVCFLFFFFIFFVNNILLMAEDILSK-HAPFKDVMLLMFYSLPM 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II PF LV ++ E + A+G+S+ LL P + + + I + + Sbjct: 70 IIANSAPFAALVGTLMCIGRFFSDLEFLAMNALGVSMKFLLVPVLAVGLFISIVSFFTND 129 Query: 122 PIATSGE----KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 + + K+ D+ + S + ++L + Sbjct: 130 VLLPASFIQLRKVYWDISTSTPALELESYSIKKNQNAVVISGLIKDGIIDELLIIDKGEN 189 Query: 178 DFTSITIDKKNKIIHRKDA---DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + I KK+++ D + ++ + + + + K + + Sbjct: 190 KESRILGGKKSELKKSTDPAVIMTLDMNEPQMLIIDGKDEKKYDSIVGKKIAYNVLAKNI 249 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN--YRAETQFYFLIVIPLMLVAMTLIAA 292 + + + + Y++ K + K+N +F+ IP + +A Sbjct: 250 NPVYFNALGPSDMTSYDLYKDIQTRKKNNEDKRLLNIYNMEFHKKFSIPFGALFFVFLAF 309 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 +S + + + G+ + ++ + + + +P Sbjct: 310 GIS-SVGKVHNQSVGFILGLLIAVAYWAVLMGGQEISLTFDVSGAFMMWLPN 360 >gi|268683689|ref|ZP_06150551.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268623973|gb|EEZ56373.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 384 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 112/354 (31%), Gaps = 6/354 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I R K T + + + ++ + + + +I L V Sbjct: 13 FMIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIG 71 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ + + V R SE+ + + G+++ Q + P + ++ I ++ Sbjct: 72 MTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQL 131 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E + + K + + + + ++ + E+ I ++ Sbjct: 132 WVIPWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFL 190 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK + ND + ++ + K++ + Sbjct: 191 REQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTT 250 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 251 PKLIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRS 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 308 GHT-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 360 >gi|15677420|ref|NP_274576.1| hypothetical protein NMB1570 [Neisseria meningitidis MC58] gi|304387021|ref|ZP_07369276.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|7226817|gb|AAF41923.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|304338893|gb|EFM04992.1| YjgP/YjgQ family permease [Neisseria meningitidis ATCC 13091] gi|316983818|gb|EFV62798.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325140780|gb|EGC63294.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis CU385] gi|325199831|gb|ADY95286.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis H44/76] Length = 371 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 113/352 (32%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++++++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFAVALILL 347 >gi|332708722|ref|ZP_08428694.1| putative permease [Lyngbya majuscula 3L] gi|332352576|gb|EGJ32144.1| putative permease [Lyngbya majuscula 3L] Length = 230 Score = 65.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 70/228 (30%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY + L+ + G + + S + A + + P + Sbjct: 2 DRYIAAELIPPFLFGVGGFSSIGVAVGSLFDMVVKITELGLSWTIAAQVVLLKFPEFMSY 61 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P L+ ++ + L+ SEL+ R+ G+S+++L+ P +V S+++ T L I Sbjct: 62 ALPISVLLATLIAYSRLSNDSELIALRSCGVSLYRLVAPALVLSLVVTGITFLFNELIVP 121 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + +++ + + + + F T+ Sbjct: 122 AANYQATITLEKALNQEKPAFDENGILYPEYQTFPQPNGTTTQTIKRLFYANGFDGQTMK 181 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + L I + L + + + N + Sbjct: 182 DLTVLEWSNLGKLNKIILSESALWNSKQNTWDFFHGSIYFISPNTSFQ 229 >gi|325108543|ref|YP_004269611.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] gi|324968811|gb|ADY59589.1| permease YjgP/YjgQ family protein [Planctomyces brasiliensis DSM 5305] Length = 374 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 49/370 (13%), Positives = 107/370 (28%), Gaps = 18/370 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPN-----YSISRGAVLA 55 M I R F+ +L FL M L +IDL + + + Sbjct: 1 MLTIFERSVFRQFLFVNAVFLCVIMGLFTIIDLFDNVDDFVNHSGEGGFPVIAMKIVGYY 60 Query: 56 ATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIF 115 I + + + L R ++ + GI +++L P ++ + + Sbjct: 61 GKMGLFIFDAAAVPMIAISLLTTMLMLKRKGQIKPFLSAGIPAYRVLTPALLCGVCVMTG 120 Query: 116 TVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI 175 + I + + + + I ++ A +I + Sbjct: 121 LKMANREILLGNAVHHLHATRGKSQSQHRVAPRYDHASHILIDGWAVYPEASRIEQAAFV 180 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVE-----------YQYGRIPIDKN 224 + K K L++ QY Sbjct: 181 LPPEIAGNDMICLKAAEAKFYPKQGKRPSGWLLRQSEPKIDSIPLTEAGRQYVIRSRQPE 240 Query: 225 STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML 284 + + + D K E A S +++ ++ + E + IV P++ Sbjct: 241 NVFVVSDVSPDLIYKAKESSAFLSTRQLLLRIRSPAIDSN-TARDLEFNLHARIVEPVLT 299 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 M IA + L G++ F++ ++ ++ PV AA +P+ Sbjct: 300 GLMVWIAIPLILRKESRGMIIAAGNCGLWL-FIVIASTYAVRFMASGSLVTPVQAAWLPL 358 Query: 345 ILTISLSILI 354 L +++ + Sbjct: 359 YLATPMAVWL 368 >gi|261392198|emb|CAX49712.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] Length = 371 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L + + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWIIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|85706342|ref|ZP_01037436.1| Predicted permease [Roseovarius sp. 217] gi|85669115|gb|EAQ23982.1| Predicted permease [Roseovarius sp. 217] Length = 374 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 32/324 (9%), Positives = 97/324 (29%), Gaps = 6/324 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 ++ +F L + +V++ + +++ A +P +I ++P Sbjct: 1 MLSQFMVLFGFFALVLVSIVWINKAVRMFDRLIG-DGQPAWVFVEFTALTLPGVIGVVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + V L+ SEL + +A G S +L P +V +++ + L+ + + Sbjct: 60 IAAFAAAVYVVNRLSSESELTVMQATGYSPLRLARPVLVFGVIVAVMMSLLAHYLIPGSL 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW----EDFTSITI 184 + N + ++ + + ++ D + Sbjct: 120 SQLRLRQDEVSRNISAKLLSDGEFLHPAPGITFYIREITQTGELRDVFLSDRRDPEAPVT 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 ++ ++ + + + Q + + +I + ++ Sbjct: 180 YTSSRAYLVQEGGGTRLVMVSGLAQNIRADQNRLFTTYFDDFSYDISSLVSRDVVNLDEV 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFSRSNQ 303 A + E+++ +Q + I L+ V L+ + + Sbjct: 240 AFANTLEMLRDPEAVAARTGTSYGTVMSQTHGRITAALLCVIAALVGFCTLLVGAHSRFG 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKS 327 V + + +I+ + Sbjct: 300 VWRQVLLAFGLLVGIKIVESIVVA 323 >gi|121635227|ref|YP_975472.1| hypothetical protein NMC1490 [Neisseria meningitidis FAM18] gi|254805325|ref|YP_003083546.1| putative permease [Neisseria meningitidis alpha14] gi|120866933|emb|CAM10693.1| conserved integral membrane hypothetical protein [Neisseria meningitidis FAM18] gi|254668867|emb|CBA06967.1| putative permease [Neisseria meningitidis alpha14] gi|254669825|emb|CBA04193.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672903|emb|CBA07222.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|325138630|gb|EGC61189.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis ES14902] gi|325142745|gb|EGC65120.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis 961-5945] gi|325198680|gb|ADY94136.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis G2136] Length = 371 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|332969352|gb|EGK08377.1| YjgP/YjgQ family permease [Kingella kingae ATCC 23330] Length = 370 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/358 (11%), Positives = 115/358 (32%), Gaps = 12/358 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I + F K + + ++ + + + +I L V + Sbjct: 2 IYKKQFIKETTLVAIGIFSVVLAILLFTQGVNMLGRAAS-GSVAIDAVGALIGFWVLGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ I + G+ + Q + P + ++ L + + + Sbjct: 61 PLLLVLTAYISILTVLTRYWRDSEMAIWLSSGLGLKQWIKPVLTFALPLAMLVAAMQLFV 120 Query: 124 ATS---GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +L++Q ++ ++ + +N + ++ + ++ Sbjct: 121 LPNAELRSREYGELLKQKQNLSLIEQGTFAELGKQNNRVYFVEQFDAEVGEMSRLFIREV 180 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 L + L+ Y D + Q Sbjct: 181 DEKGRDSVVFAQSGHMKLEADNRRVLVLQNGYRYTGNAGQGDFEQVSF------QELQLV 234 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ S N + + + + I +P+ ++ ++L+A +S R Sbjct: 235 INTAPKLIEPINHRRTIPSQNLIGSDNPQYQAELMWRISLPITVILLSLLAIPISYFNPR 294 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + V + +T+++ + G + P A L+P+ + ++ I +L++ Sbjct: 295 TGN-SYHVVVAVGFFLFYQNGLTLLRDAVEDGKI-PFWAGLLPMHIIMAACIFVLMKM 350 >gi|110638188|ref|YP_678397.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280869|gb|ABG59055.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 483 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 29/285 (10%), Positives = 83/285 (29%), Gaps = 2/285 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L K + + + + + + + +++ S A L I Sbjct: 5 KRLDLLVLKAFFGPFILTVFVVTFIFLMQTILKYIDELVGK-GLSYLDYAELMMYFSMNI 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL + +EL ++ GIS+ +++ P + + + N Sbjct: 64 LPVALPLAILLSSLMTFGNLGQFNELTAIKSSGISLIRVMVPIAIWVLGCTVGLYFFNNY 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-ISNPQQDIFIGAKKILPENHIWEDFTS 181 + L+ + + I I + + Sbjct: 124 VVPKANLKAFSLLYDLRQKKPSLDLKPGVFYNGIPGYSIKIVQKFDNDSSIKGVIIYDHT 183 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + II + + + L+ Y + + +N + + Sbjct: 184 QSRGNTDVIIADSGSMYLFNQSQYLALELFRGNSYNEFKGEGGMSYINPEEFVRNSFDKT 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 + + S +++ K + E + + + + Sbjct: 244 KIVFNLSSFDLKKTKEELFMGSRQMKGVDELDHHIDSIQRMFVSV 288 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 1/112 (0%) Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +RS ++ ++ I + E Y + + LI A + + Sbjct: 343 NQARSIKSYLQGNVERDERFIKEIHEFEVTKYQKFTQAVACFVLFLIGAPLGAIIKK-GG 401 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I V I Y + + K G+ A + + + + Sbjct: 402 LGIPVLICIIFFIFYYVFSITGEKWTKEGVYPADFAMWFGNGILFCVGLFFM 453 >gi|119356768|ref|YP_911412.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] gi|119354117|gb|ABL64988.1| permease YjgP/YjgQ family protein [Chlorobium phaeobacteroides DSM 266] Length = 442 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY K ++ ++ + + ++ + ++ L + Sbjct: 1 MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGK-GIGWMTLLELVVVQSAW 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ IP L+ ++ F + SE+ I RA GIS+++L+ P ++ + LL + N Sbjct: 60 MVSFTIPMAVLIAVVMAFGAMTNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + L+ + + Sbjct: 120 VVLPEANYKAKSLMADIVKSKPVFGLTENAF 150 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 10/99 (10%), Positives = 36/99 (36%), Gaps = 1/99 (1%) Query: 260 NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLY 319 +S+ + +++ + + L+ A + + +R I + + + Sbjct: 336 MESDTGMYNKYMAEYHKKYALAFACIVFALVGAPLGV-LARRGGFGIGAGLSLVFFVLYW 394 Query: 320 TIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ + + G+L P + + I + + +L + Sbjct: 395 ILMISGEKLAERGLLDPGLSMWLGNITIGFIGLFLLYRL 433 >gi|325134627|gb|EGC57267.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M13399] Length = 371 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/352 (10%), Positives = 113/352 (32%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++++++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFAVALILL 347 >gi|322506460|gb|ADX01914.1| permease [Acinetobacter baumannii 1656-2] gi|323516339|gb|ADX90720.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 350 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 113/340 (33%), Gaps = 6/340 (1%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 + +++ L + + S + R+P + I+P + ++V Sbjct: 1 MVIALLTLIMMGGRLIKYFG-VAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLV 59 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 F L E+ + G+S QL + +++ + +++ + G + L Sbjct: 60 FGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQ 119 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADL 198 ++ ++ I+ + K + +I K+A Sbjct: 120 AVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATR 179 Query: 199 AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 + ND + +V+ + I + T + + ++ +S Sbjct: 180 VEVANDTANVVDLVQGRRYEIFPGQPKYT--QAEFQSYRLRLENDKDVKFESGDVEALST 237 Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 S + ++ ++ + + P ++ +++ ++S R + ++ IF L Sbjct: 238 SKLFSKANDPVVRSELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIP-SIFIFASL 296 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ +K+ G L A +L +++ + +K Sbjct: 297 IVLMIAIKTRISKGELDIW--AYPVALLVYAIAAALFSRK 334 >gi|291045045|ref|ZP_06570753.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011048|gb|EFE03045.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 384 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 113/354 (31%), Gaps = 6/354 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I R K T + + + ++ + + + +I L V Sbjct: 13 FMIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIG 71 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ + + V R SE+ + + G+++ Q ++P + ++ I ++ Sbjct: 72 MTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQL 131 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + E + + K + + + + ++ + E+ I ++ Sbjct: 132 WVIPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFL 190 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK + ND + ++ + K++ + Sbjct: 191 REQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTT 250 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 251 PKLIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRS 307 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 308 GHT-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 360 >gi|251771423|gb|EES52002.1| permease YjgP/YjgQ family protein [Leptospirillum ferrodiazotrophum] Length = 377 Score = 65.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 94/323 (29%), Gaps = 4/323 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY F L LL +IL+ + + S+ L + P Sbjct: 1 MKIIHRYLFLELLTPFFLSLLVLVILLLTQQAL-LIMNLLVNKGLSVETVFRLLSMIFPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IIP L + F L E++ +A GIS+ +LL P + + + + Sbjct: 60 FLSMIIPVSVLTASTATFHRLASDGEIIAFKASGISLSRLLLPLFLFAAIGFGTNFYLSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + DL+ + + + + ++ Sbjct: 120 KAMETQGLSLQDLLVRVFQKKLSLAIKPQSFNNFMGRFIIYVEKMPTLSHIDGVFIYQKE 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + I + L + ++LK + + + + Sbjct: 180 KKTGPRTVIFAQSGEILNERHPPGLRLK-LSHGTFFQEGSAQQYIRFGSYDLTITGHHTD 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + +S EI +++ S S +RA Y P + + RS Sbjct: 239 DSIRVKSIDEIRAEIARS-PSPDPSLFRALEDRYKNYTYPFSCFFFAFLGIPYGIYTMRS 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITI 324 + V + + Y + TI Sbjct: 298 GRLAGFVFATVTV-ILFYMMNTI 319 >gi|240127075|ref|ZP_04739736.1| hypothetical protein NgonS_00198 [Neisseria gonorrhoeae SK-93-1035] gi|268685430|ref|ZP_06152292.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268625714|gb|EEZ58114.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 371 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 113/352 (32%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + ++ + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLDRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTCYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|119953585|ref|YP_945795.1| hypothetical protein BT0808 [Borrelia turicatae 91E135] gi|119862356|gb|AAX18124.1| hypothetical protein BT0808 [Borrelia turicatae 91E135] Length = 355 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 109/351 (31%), Gaps = 7/351 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 + F T L+ +IL+ +IDL + N SIS + +P Sbjct: 4 DKLFVNNISLTFLFMNFLFVILIVLIDLFTNLFNYLD-HNLSISDIVYIYYLYLPKCFSD 62 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + L + NL+ +E++ + GISI ++L ++ S+ + + N + Sbjct: 63 GLALSFLFAVSNLIGNLSMRNEIIGLFSCGISISRILRSIIMLSVFISVMLFFFDNYLVI 122 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ N +II + N + Sbjct: 123 DTIAKRDAFLKNSVGNQGANDRNIIIRDFAREIYNIKHYDIENDTIANLMIILKDQNDNF 182 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 KK I + + + V+ +E + I ++ + + Sbjct: 183 KKRYDISKAEWIDSRWRLYGVREFSKIERDVIEKFHEVLDGRGIINLEPEYIKIVMLSSK 242 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + +F ++I + + L+ + L++ +VS + Sbjct: 243 TLNFSKLISWIKALR----REKLDYSEALFDLLSRIFFSFRLILLSFTVSFVSLALKKNI 298 Query: 306 II--VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + I + I + G L A+ +P IL I ++ +I Sbjct: 299 FIWSLLNSIAFAVVYVMSIMVFSFLADLGYLPIAVASSLPTILFIVINFII 349 >gi|315453577|ref|YP_004073847.1| putative integral membrane protein [Helicobacter felis ATCC 49179] gi|315132629|emb|CBY83257.1| putative integral membrane protein,Permease YjgP/YjgQ [Helicobacter felis ATCC 49179] Length = 355 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 104/348 (29%), Gaps = 5/348 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 LW + YYLK L+ + ID + ++ + N + + Sbjct: 3 LWFFVGSYYLKYCFVILMALELFFIGIDSLQYADKFPDAANL----LLLFFVYDGLYALN 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P L+ ++ + R+++ AIG SI Q+LNP + ++ I V + Sbjct: 59 YTLPISLLLGLVLFYITFIRSNQYSALLAIGYSIRQILNPMLTINLFFIIIFVGLNATPF 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + +I + + + + + + ++ + Sbjct: 119 VYMQDKAMAIIYKDNAGNVSENLLVKYNNDYVYFGKINPLLQNAQNIKIFTLKNDELSAV 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + + + G + + + Sbjct: 179 AQADHAAFKDKYWTLHQATIATLPTPLGLGDQGLLVENAPLLKTLKGFHPKVLDTIYQNK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + S + + + + Y I+ P + ++ A + +R Sbjct: 239 PAVSITDAFRSLHVLY-RQHGDTKKIRGFLYVAILTPFFVPLTAILIARYTPNLARYENL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 ++ I +L+ + + F +G+ P +IP + +++ Sbjct: 298 ALLSLKFIILALILWGLFFALGKFSIAGLFYPEFGIVIPFAILCGITL 345 >gi|183221200|ref|YP_001839196.1| putative permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911291|ref|YP_001962846.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775967|gb|ABZ94268.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779622|gb|ABZ97920.1| Putative permease; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 530 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 73/290 (25%), Gaps = 4/290 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P IL Y K L L L ++ + + ++ R Sbjct: 37 PSILRIYILKEILSPFLVALSFFTMIYMAVAIQKMIGLFVGK-GVDFFRLLDYMGYVFGN 95 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + IP L+ I+ L+ SE+ RA G+S + + F+V L+ + + Sbjct: 96 TLPMTIPMACLMSGIMAAGRLSGDSEITAMRASGVSFPYIYSNFLVFGFLMTLIVGYLNF 155 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKIL---PENHIWED 178 + + D + G E + Sbjct: 156 YLGPENTRKMKDFDNWIATYNPLLAIQPGQFSGDKTQDFFSEKGRTMYSGGVDEEGNLSN 215 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + K+ +V+ + G + KN+ Sbjct: 216 VQIREWAISAAGTDFIMVNNLAVPMGGSKMLQVINAKEGLLVEKKNAAGEYEKSVRLKKG 275 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMT 288 E + I M+ N ++T + L + Sbjct: 276 YVIEWDPETNAIGITNFMNGEMDYNTPAKKESKTLSINVKPDTFSLPMLI 325 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 34/111 (30%), Gaps = 1/111 (0%) Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 + + ++S + + + PL ++ + L RS + + Sbjct: 385 FALFTQLSELLNESKKTLTGFNVEIHKRFATPLSCQIFFFLSFPLGLVVKRSGK-GMSFT 443 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + YT + I+ +LSI I++ + D Sbjct: 444 LAVVFLLIYYTFFIFGSGISYKENVPDWVGPWSANIVIATLSIYIMISRTD 494 >gi|254418640|ref|ZP_05032364.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] gi|196184817|gb|EDX79793.1| putative permease, YjgP/YjgQ family [Brevundimonas sp. BAL3] Length = 397 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 32/360 (8%), Positives = 109/360 (30%), Gaps = 11/360 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY F+ + + + + + E S+ L +P ++ Sbjct: 22 LIQRYLFRQISLPVVAACASLAGIGILSQSLDQLEVIVER-GQSVWVMVKLTLLALPQLL 80 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P V ++ + R EL + A G++ WQ+++P + L+ I +++ Sbjct: 81 AVILPIGLFVGALIALTRMQREQELTAAFAGGMTRWQVISPAARLAFLVLILNLVMTLFA 140 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ + + + + ++Q + ++ +++ Sbjct: 141 QPWAQREARNQAFAIRTDLAALLVEEGQFVQGPDGLTVYVQQIEQNGLLKNLFVYLDDGK 200 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVE---YQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + A + + + + + + ++ Sbjct: 201 STQNWSAAEARFGRDAANEPVLTMIDGSWQKYSSRGVLETLSFDRYDFPLGQFSGVTEQI 260 Query: 241 SEQFASRSFYEIIKKM-SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + A +++ + + + I PL + +A + + S Sbjct: 261 RYKPADLYLRQLLTPSPRVLETAG--SRGELLAEAHARIAAPLYALVAMAMALAAIMGGS 318 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA--LIPVILTISLSILILLQ 357 ++ + +G + I + P + ++ ++ ++ +L + Sbjct: 319 -FSRTGYSLRIAKAAGV-FLLVRVIGYGLVAASAWNPWMNILQYLAPLIVVAAAVRLLFR 376 >gi|325279047|ref|YP_004251589.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] gi|324310856|gb|ADY31409.1| permease YjgP/YjgQ family protein [Odoribacter splanchnicus DSM 20712] Length = 487 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 59/154 (38%), Gaps = 1/154 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L + K ++ + +M ++ + L + +++ + A L Sbjct: 1 MKKLHIFMLKSFIGPFVATFFISMFVLIMQFLWRMIDEIVGK-GLEFTVIAELLIYVATT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L+ +I+ F +L EL+ ++ GIS+++++ P ++ I L +F + N Sbjct: 60 LVPMALPLAVLLSSIMTFGSLGENYELIALKSAGISLYRIMKPLIILIICLTVFAFVFSN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 I L+ + + + Sbjct: 120 NILPVANLKFYSLLYDIRKQKPEMSFKEGIFTND 153 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 34/100 (34%), Gaps = 1/100 (1%) Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + + +++ +++ + I A + R + V + + Sbjct: 357 HYYVAQQENVIKSQLEWHRKFTLSFACFIFFFIGAPLGA-IIRKGGLGMPVVVSVLLFII 415 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 Y I + + + ++ P A I + + L I++ + Sbjct: 416 YYIISMMGERSAREAVISPAAGMWISAFILLPLGIILTYK 455 >gi|218768538|ref|YP_002343050.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|121052546|emb|CAM08886.1| conserved integral membrane hypothetical protein [Neisseria meningitidis Z2491] gi|308389704|gb|ADO32024.1| hypothetical protein NMBB_1799 [Neisseria meningitidis alpha710] gi|319410787|emb|CBY91172.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] gi|325128631|gb|EGC51500.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis N1568] gi|325130631|gb|EGC53374.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis OX99.30304] gi|325144870|gb|EGC67158.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240013] gi|325201754|gb|ADY97208.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240149] gi|325204534|gb|ADY99987.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M01-240355] gi|325205695|gb|ADZ01148.1| putative permease, YjgP/YjgQ family [Neisseria meningitidis M04-240196] Length = 371 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ + ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAVLVAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTIPTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|187477637|ref|YP_785661.1| permease [Bordetella avium 197N] gi|115422223|emb|CAJ48747.1| putative permease [Bordetella avium 197N] Length = 372 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 32/321 (9%), Positives = 95/321 (29%), Gaps = 11/321 (3%) Query: 44 PNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLN 103 LAA + I+ + + R SE+V+ A G+S+ + Sbjct: 42 GTIGADVVLGLAAFSTITALPTILAVSLFIAVLTTVTRNYRESEMVVWFASGLSLADWVR 101 Query: 104 PFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------MQISN 157 P + +I + + + A + + ++++ D K + ++ Sbjct: 102 PVLRVAIPVALMVAGLTLVAAPWAYRQIGEYRERFEQRSDLSKVAAGQFAESGRGNRVFF 161 Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 + + G + + + K+ + + K + Sbjct: 162 AEDPVDPGDELGAVFARAIDPEWFSVLTAKSARGETLENGDRFLVLSKGHRYDLKPGTPE 221 Query: 218 RIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + + + K S + A+ + + + + Sbjct: 222 VRLTNFEEYGIRLESKGGEDPIASARAAAERSSKARSTTQLMEDNTNSSWSQVMWRVSLP 281 Query: 278 IVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 + + + + A R + ++ G+ G + +I + +++ SG L Sbjct: 282 LAALNLALLAIPLGA----VNPRLGRSGDLLIAGL-VGLLYINLINLSRAWISSGKLPFG 336 Query: 338 AAALIPVILTISLSILILLQK 358 I+ ++ ++ +L ++ Sbjct: 337 VGVSAIHIIVLAFTVFLLYKR 357 >gi|168701113|ref|ZP_02733390.1| hypothetical protein GobsU_16419 [Gemmata obscuriglobus UQM 2246] Length = 410 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 53/414 (12%), Positives = 125/414 (30%), Gaps = 60/414 (14%) Query: 1 MPGI-LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRV 59 M G L R F ++ L L LV V+ + +Q+ S+++ V Sbjct: 1 MFGTTLNRMIFWELVRVFLLSLGSLTGLVLVVMSVQQASQL----GLSLAQLVRAVPLLV 56 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P I+ IP TL VV+ L +E++ +A G+ ++ ++ P ++ +L T + Sbjct: 57 PSILPIAIPATTLFAACVVYGRLAHDNEVIALKAAGVHLFGIVKPTLLLGVLTTATTAAL 116 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +++ D I + ++ + +++ + + Sbjct: 117 AHSTIPRTQQMFWDEILSDPEEVLYNMIRRDRCLRHPSLPNVLYVRDVEGKRLIDVVVKR 176 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKV---------------------------- 211 D + D+ ++ V Sbjct: 177 RIKEKDPRTGAEVVMGYDMVARMHEAQLRVDVAAGTLSIEPDRLVIDGKNASGSAASSGA 236 Query: 212 -VEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 V + + + + ++ + A + + + + N RA Sbjct: 237 FVMDLPDSVTGKEARLKTSTLTWDELPERAAGVAAKLDRITRERAARQAEINQMDPNLRA 296 Query: 271 ETQFYFLIV-----------------------IPLMLVAMTLIAASVSLEFSRSNQPRII 307 Q + + + L+ V + +RS+ Sbjct: 297 NAQAQIEGYNFEIAGTTKQLRNLQAEVHARPALAVSCLVFALVGCPVGVYLNRSDYLSTF 356 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI---LLQK 358 + + + + Y ++ GKSG L I+ ++ +L+ LL++ Sbjct: 357 MMCFLPTLLVYYPLLLAGTDMGKSGRLPMALGCWAADIVMGAVGVLLAWRLLRR 410 >gi|46199050|ref|YP_004717.1| hypothetical protein TTC0744 [Thermus thermophilus HB27] gi|55981077|ref|YP_144374.1| hypothetical protein TTHA1108 [Thermus thermophilus HB8] gi|46196674|gb|AAS81090.1| hypothetical conserved membrane spanning protein [Thermus thermophilus HB27] gi|55772490|dbj|BAD70931.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 368 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 88/355 (24%), Gaps = 20/355 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + L L LL + L + + + VP I Sbjct: 2 ILHRYLLRESLPVLLLALLFLTAVYLFGFFYAGAR---WLEGVPLPKILRWLSYHVPGIW 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q+ P + ++VF L + GI + + P V +L + + + Sbjct: 59 VQVFPIALVTTTVLVFGRLAAEGAHFALLSAGIPLGRAALPLVAVGAVLSGLALYLQEYV 118 Query: 124 AT-SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ + + G + I + F E Sbjct: 119 VPEANNRVRVAWWDEIHTQGAGLFRLKGMQIPIGQGKSLYFQDFDMAAKEMVGVRITAFQ 178 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKV----------------VEYQYGRIPIDKNST 226 R + + + +V + R+ + Sbjct: 179 GEVGTFLFAERGTWEDKTLTLKDYRYYQVDFAQVPGLETAPDLLAQVRRVFRVVSQGKTL 238 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 + + S + + + + + + L L Sbjct: 239 EVTSDLSRARAIADYADTFSFGQDSLSEAWRKLKDPFLPPLEKWRARLELHSKLALPLAN 298 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 + L+ + ++ P + + + Y + ++ G L P A Sbjct: 299 LVLVLLAAAMALRYGKSPGLALGMSVVLALAYYGAFFLGRALAGIGALPPELGAW 353 >gi|256420369|ref|YP_003121022.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] gi|256035277|gb|ACU58821.1| permease YjgP/YjgQ family protein [Chitinophaga pinensis DSM 2588] Length = 478 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 51/156 (32%), Gaps = 1/156 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L + K ++ + + ++ + L + + + L Sbjct: 1 MKKLDKLLIKTFMGPFVATFFVTLFVLVMQFLWKYIDDLVGK-GLDTPVIIELITYTSAN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L+ +I+ F NL + ELV ++ GIS+ + + P + ++ I L N Sbjct: 60 LVSLALPLAVLLSSIMTFGNLGESFELVALKSSGISLTRFMRPLLAVCTMIAILAFLFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN 157 L+ ++ + Sbjct: 120 YAMPVANLRAKSLLYDITNSKPAFNIKAGVFYTDIP 155 Score = 41.6 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 7/88 (7%), Positives = 31/88 (35%), Gaps = 1/88 (1%) Query: 270 AETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG 329 + ++ + + M LI A + R + + + + + + Sbjct: 359 HKVEWQRKFTLAFSCIVMFLIGAPLG-SIIRKGGLGTPLIFAVVFFVIFNIFFMVGEKMA 417 Query: 330 KSGILLPVAAALIPVILTISLSILILLQ 357 + ++ + + I+ I +++ ++ + Sbjct: 418 RKDVMATWSGMWLSNIVLIPIAMFLIYK 445 >gi|227536228|ref|ZP_03966277.1| YjgP/YjgQ family permease [Sphingobacterium spiritivorum ATCC 33300] gi|227243835|gb|EEI93850.1| YjgP/YjgQ family permease [Sphingobacterium spiritivorum ATCC 33300] Length = 494 Score = 65.1 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 33/279 (11%), Positives = 88/279 (31%), Gaps = 5/279 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I + ++K + M ++ ++ L + + + + L + Sbjct: 1 MKKI-HLLILQSFIKPFIVTFCIVMFVLLMLFLFKYIDDLIGK-GFEWYVILQLIGYQCA 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +Q +P L+ +I+ F NL + ELV +A G+S+ + + P + L + L Sbjct: 59 VQMQMALPLSMLLSSIMTFGNLGESYELVAIKAAGVSLRKAMTPLFILVALFSAGSFLFS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + I L+ ++ + K + + Sbjct: 119 DYILPVVNLKMGSLLYDVRNKKADFLIKPGIFNNTIPGYAIRAKSKSKDGTVLNELMIYD 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + N ++ K+ + ++ V+ + G + F +F Sbjct: 179 HTSGSSSNNVLLAKEGFVQNSPDNNYM---VLRLKDGIRYEESKGKDSKSYDPRKQFVRF 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 + + F +M ++++ ++ + Sbjct: 236 QFKETEQKFDMGDFQMKRTDENLFKSHHAMLNLRQLKMY 274 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 67/221 (30%), Gaps = 1/221 (0%) Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 +++ +QK D+ + + + ++ + D Sbjct: 234 RFQFKETEQKFDMGDFQMKRTDENLFKSHHAMLNLRQLKMYTDSNHRQMDSVGRMAEHDI 293 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 Y ++ ++ KN +P S SR E + Sbjct: 294 RNYYNYYSNYFRSPGMKIVPAKVKPFKNLLEDVVPATERRQIVGSAMTQSRYITETLGNK 353 Query: 257 SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGF 316 + K+ + R +F+ + + + + I A + R + V I Sbjct: 354 TLEYKAFRDKDIRYRLEFHRKFTLAVSCLLLFGIGAPLGA-IIRKGGLGLPVVMAIIFFL 412 Query: 317 MLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + I T+ + K L P+ + +I+ L+I + + Sbjct: 413 IYHIISTVSEKAAKDASLAPMTGMWMAIIILTPLAIFLTYK 453 >gi|59801587|ref|YP_208299.1| hypothetical protein NGO1228 [Neisseria gonorrhoeae FA 1090] gi|194097861|ref|YP_002000906.1| hypothetical protein NGK_0281 [Neisseria gonorrhoeae NCCP11945] gi|239998342|ref|ZP_04718266.1| hypothetical protein Ngon3_02533 [Neisseria gonorrhoeae 35/02] gi|240014487|ref|ZP_04721400.1| hypothetical protein NgonD_07553 [Neisseria gonorrhoeae DGI18] gi|240016933|ref|ZP_04723473.1| hypothetical protein NgonFA_07151 [Neisseria gonorrhoeae FA6140] gi|240079727|ref|ZP_04724270.1| hypothetical protein NgonF_00199 [Neisseria gonorrhoeae FA19] gi|240117144|ref|ZP_04731206.1| hypothetical protein NgonPID_01570 [Neisseria gonorrhoeae PID1] gi|240121009|ref|ZP_04733971.1| hypothetical protein NgonPI_04421 [Neisseria gonorrhoeae PID24-1] gi|268602832|ref|ZP_06136999.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|59718482|gb|AAW89887.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933151|gb|ACF28975.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|268586963|gb|EEZ51639.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|317163631|gb|ADV07172.1| hypothetical protein NGTW08_0198 [Neisseria gonorrhoeae TCDC-NG08107] Length = 371 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|149915564|ref|ZP_01904090.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] gi|149810456|gb|EDM70299.1| hypothetical protein RAZWK3B_06402 [Roseobacter sp. AzwK-3b] Length = 376 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 110/365 (30%), Gaps = 16/365 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M +Y + + +F L + + ++ + ++ + + +P Sbjct: 1 MTK-FDQYVIRKLITLFAFFALILIAIFWLDKALRMFERLLGKGQSNWLLLEL-ILLTLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + + V L+ +E+ I +A G S ++++ P + IL + Sbjct: 59 PVVASILPIASFASAVSVTNRLSSEAEITIMKASGCSTYRIIRPIFIFGILTTSLMAWLT 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N I K L Q N ++ + + I+ Sbjct: 119 NSILPESGKRLSSLRSQVDQNITSSFLTEGEFLHPTPGVTLFIGKVTQDAELRRIFLSDR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKMDG 236 + + + + + + + L+I ++ Sbjct: 179 RDLRETIIITAEKAYTEHSPTTVQLLMVDGTTQILRENDNKLFVGRFEEYALDISELVET 238 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--V 294 + E+IK+ S S + + P++ ++ A+ + Sbjct: 239 TYSTQKTVTQAKTVELIKQPSEVIASTKATLGEVAFELHNRFAQPILCAIAAVLGATTLL 298 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL---PVAAALIPVILTISLS 351 + +SR R I F L + +++S + +L +P I L Sbjct: 299 TGSYSRFGVWRQ-----IGIAFFLLVGLKLVESAVSAHVLNDSGLWFLMYVPSISGAVLI 353 Query: 352 ILILL 356 I+ Sbjct: 354 CTIIY 358 >gi|226951739|ref|ZP_03822203.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] gi|226837529|gb|EEH69912.1| permease YjgP/YjgQ-like protein [Acinetobacter sp. ATCC 27244] Length = 340 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 118/327 (36%), Gaps = 6/327 (1%) Query: 32 DLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVIS 91 L +I + + + A R+P + I+P + ++VF L E+ + Sbjct: 4 QLIKIFGRAAQ-GRLDGGVLLSIIAYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVL 62 Query: 92 RAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIP 151 G+S QL + + + I +++ A++G + L+Q Sbjct: 63 NGSGVSRNQLTRLLLPMTAVFLIVQAVLMCWGASAGIRGYQSLMQTQAVRAGFDLVRPKE 122 Query: 152 WMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKV 211 ++ + ++ I+ + S DK +++I K+A I ND + + Sbjct: 123 FISSGSYTIYAGSLSEDRKNLKDIFYYYKSDREDKPDQMILAKEATRVEIENDTASVVDL 182 Query: 212 VEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAE 271 V+ + I ++ T + + S E ++ +S S ++ Sbjct: 183 VQGRRYEIYPNQPRYTQAEFQSYRLRLENDKDVNFES--EDVEALSMSKLWQKRDDFVVR 240 Query: 272 TQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS 331 + + I P ++V +A ++S R + ++ IF L ++ +K+ Sbjct: 241 GELGWRIFGPFVMVVALFLAVALSEVSPRQGRYYRLIP-AIFIFASLIVLMIAIKTRISK 299 Query: 332 GILLPVAAALIPVILTISLSILILLQK 358 L A V+L ++ + +K Sbjct: 300 EELDIW--AYPAVLLIYGIAAALFTRK 324 >gi|149201833|ref|ZP_01878807.1| permease YjgP/YjgQ [Roseovarius sp. TM1035] gi|149144881|gb|EDM32910.1| permease YjgP/YjgQ [Roseovarius sp. TM1035] Length = 373 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/345 (10%), Positives = 105/345 (30%), Gaps = 11/345 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 ++ +F L + + ++ + +++ A +P +I ++P Sbjct: 1 MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLIG-DGQPAWVFVEFTALTLPGVIGVVLP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + V L+ SEL + +A G S +L P V +++ + L+ + + S Sbjct: 60 IAAFAAAVYVVNRLSSESELTVMQATGYSPLRLARPVFVFGVIVAVMMSLLAHFLIPSSL 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW----EDFTSITI 184 + + N + ++ + ++ D + Sbjct: 120 SQLRLRLDEVSRNITAKLLSEGEFLHPAPGVTFYIREITLSGELRDVFLSDRRDPEAPVT 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 ++ ++ + + + Q + + +I + ++ Sbjct: 180 YTSSRAYLVQEGGGTRLVMVSGLAQNIRAEQNRLFTTYFDDFSYDISSLVRRDVVNLDEV 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS--VSLEFSRSN 302 A E+++ Q + I L+ V L+ + SR Sbjct: 240 AFAGTLEMLRDPEAVAARTGVSMGAVMAQMHGRITAALLCVIAALVGFCTLLVGAHSRFG 299 Query: 303 QPRIIVA-YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 R ++ +G+ G + + + + + + +P ++ Sbjct: 300 VWRQVLLAFGLLVGLKIVESLVLAPVLASAVLWPLL---YLPALI 341 >gi|255009764|ref|ZP_05281890.1| putative permease [Bacteroides fragilis 3_1_12] gi|313147551|ref|ZP_07809744.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136318|gb|EFR53678.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 634 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 78/268 (29%), Gaps = 4/268 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L + +++ +S A + Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGK-GLEMSVLAQFFFYSALSL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P +V + + N Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPRAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDR---KTGMLYDVIIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 AD + K + G + + + +++ + F E Sbjct: 181 DFSNNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + F S SN Sbjct: 241 KHTIIQFDSDFNMADASIMSNQSTTKDM 268 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + SF+ N R + +++ I I L + I A + R + Sbjct: 347 NLSSDWGFKSFTMAQNDLSIRRHKIEWHRKITISLSCLLFFFIGAPLG-GIIRKGGLGMP 405 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V +F+ + Y I + G + + + L + + Sbjct: 406 VIVSVFTFIIYYIIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|254458642|ref|ZP_05072066.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] gi|207084408|gb|EDZ61696.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] Length = 355 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 115/348 (33%), Gaps = 6/348 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 ++Y +YLK L+ ++ + D E + + + + + I Sbjct: 3 FKYISFHYLKYFSVILIALVMFLVGFDYMENASSLSSS----ANLVLIYLVYKAFFAIDM 58 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P + I L R++ LV ++G S +L PFVV S + + V + + Sbjct: 59 LLPLSLIFAMITTKIFLIRSNALVSFYSLGYSRVDVLKPFVVVSTTIIVIFVSLHAIPSF 118 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDFTSITI 184 S + I++ K + + ++ ++ + + Sbjct: 119 SRADEFSNNIRKNAAYLSPTKDLFFTYKDKYIYFAQMLPLQERAEGIRVFSIKENSLKEV 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + +R ++ + K + G + + + + E Sbjct: 179 LVAKEATYRNESWHIAQADVITKPDNMSFESKGIKVDHEKGLDILHGFRPKMLDQVYEGK 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + I + + NI + + Y + + P + + +I +R Sbjct: 239 VNFTIKNAIDALLLLSDQNI-NTRSIKGALYKIFIYPFFVPCLVVIIFFFVPISARFLNV 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + +++ I+ ++ + + A + PV++ +++ Sbjct: 298 SLFSFGAILATLLVWGILFMLIELSNNKTIPSEAGVVAPVVILFLIAL 345 >gi|88800548|ref|ZP_01116110.1| predicted Permease [Reinekea sp. MED297] gi|88776693|gb|EAR07906.1| predicted Permease [Reinekea sp. MED297] Length = 350 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 121/353 (34%), Gaps = 9/353 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L+RY + +K ++ L +IL+ ++++ ++ +S + V+ +VP+++ Sbjct: 2 TLYRYLYGQIMKPFVFMTLVLLILLIATEISDTLTKIL-TGQFSDNALWVVIGFQVPILL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNP-FVVGSILLGIFTVLVINP 122 Q+I+P + + L++ SE I AIGIS LL V ++ + + + + Sbjct: 61 QEILPAAFFLACLTTLHRLSQDSERAILHAIGISDGDLLRFLLVFAALPAMLLVLALNHY 120 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I ++ + + + D + I A + + ED +I Sbjct: 121 ITPKAQENLELYVTEQLNRPITDIIDANSFYNIGAINATF--YAARNNSQTQSLEDVFTI 178 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + + + + ++ + + + + Q E Sbjct: 179 AKSQSSYTVTAAKEVRTQGAENAQYFQ---FFEGEQTQFSFDESEPLQTQRFGMMQLRIE 235 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + S ++ ++ + + + L L + A ++ RS Sbjct: 236 EDGNASPWQRRNALTSFELAKSEDRHD-QLTLISRFATSLYLPLFCIWAVVLTRFKPRSA 294 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + +A GI + + L + ++ ++++ L Sbjct: 295 KVG-AMALGIVLYILTNFAYRTLHGAVGRSDLSILFQPWWFFVVLGVIALITL 346 >gi|317401899|gb|EFV82506.1| permease [Achromobacter xylosoxidans C54] Length = 385 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 118/355 (33%), Gaps = 6/355 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R +I+ + L + + N VLAA + I Sbjct: 25 RSVVSEITSHAGVVFSTLLIVWLSVLLVRLLGEAAG-GNIGADVVLVLAALSTITALPTI 83 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + + R SE+V+ A G+S+ L P + ++ + I + A Sbjct: 84 LAVSVFIAVLTTVTRNYRESEMVVWFASGLSLADWLKPVLRVAVPVAIAVAGLTLVAAPW 143 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + + ++++ D K + S +F P + + F T + Sbjct: 144 AYRQIGEYHERFEQRSDLSKVTAGQF-AESAGGNRVFFAEDPAKPTDELGNVFARETGPE 202 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK---MDGFQKFSEQ 243 ++ A + N L ++Y P ++ ++ Sbjct: 203 WLSVLTASSAHSETLPNGDRFLVLGEGHRYDLKPGTPEIRLVHFEKYGLRLESKGGDDPV 262 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +R+ E K + + + + +Q + I +PL + + L+A + R + Sbjct: 263 AEARAAAERSSKARTTPQLMADNTSSSWSQVMWRISLPLAALNLALLAIPLGAVNPRLGR 322 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ G+ G + +I + +++ +G L + ++ + +L+++ Sbjct: 323 SGDLLIAGL-VGLLYMNLINLSRAWISNGKLSFGVGTVAIHVVVAMFTAFLLMRR 376 >gi|240122360|ref|ZP_04735316.1| hypothetical protein NgonP_00185 [Neisseria gonorrhoeae PID332] gi|240125094|ref|ZP_04737980.1| hypothetical protein NgonSK_02547 [Neisseria gonorrhoeae SK-92-679] gi|254494457|ref|ZP_05107628.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268680947|ref|ZP_06147809.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|226513497|gb|EEH62842.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268621231|gb|EEZ53631.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 371 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 112/352 (31%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q + P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|253564060|ref|ZP_04841517.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947836|gb|EES88118.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161640|emb|CBW21180.1| putative permease [Bacteroides fragilis 638R] Length = 636 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 79/268 (29%), Gaps = 4/268 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L + +++ +S A + Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGK-GLEMSVLAQFFFYSALSL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P +V + + N Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDR---KTGMLYDVIIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 AD + K + G + + + +++ + F E Sbjct: 181 DFSNNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + + F S SN Sbjct: 241 KHSIIQFDSDFNMADASIMSNQSTTKDM 268 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 34/110 (30%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + SF+ N F + + +++ I I L + I A + R + Sbjct: 347 NLSSDWGFKSFTMTQNDFSIRKHKIEWHRKITISLSCLLFFFIGAPLG-GIIRKGGLGMP 405 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + + Y I + G + + + L + + Sbjct: 406 VIVSVLTFIIYYIIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|53711884|ref|YP_097876.1| hypothetical protein BF0593 [Bacteroides fragilis YCH46] gi|60680112|ref|YP_210256.1| putative permease [Bacteroides fragilis NCTC 9343] gi|52214749|dbj|BAD47342.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60491546|emb|CAH06298.1| putative permease [Bacteroides fragilis NCTC 9343] Length = 636 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 79/268 (29%), Gaps = 4/268 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L + +++ +S A + Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGK-GLEMSVLAQFFFYSALSL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P +V + + N Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDR---KTGMLYDVIIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 AD + K + G + + + +++ + F E Sbjct: 181 DFSNNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + + F S SN Sbjct: 241 KHSIIQFDSDFNMADASIMSNQSTTKDM 268 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 34/110 (30%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + SF+ N F + + +++ I I L + I A + R + Sbjct: 347 NLSSDWGFKSFTMTQNDFSIRKHKIEWHRKITISLSCLLFFFIGAPLG-GIIRKGGLGMP 405 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + + Y I + G + + + L + + Sbjct: 406 VIVSVLTFIIYYIIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|257462588|ref|ZP_05626998.1| hypothetical protein FuD12_01969 [Fusobacterium sp. D12] Length = 270 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 27/266 (10%), Positives = 70/266 (26%), Gaps = 3/266 (1%) Query: 91 SRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDII 150 +IG+ I +L P + F + + I L + + Sbjct: 1 MNSIGMDIRAILKPILYLGFASMFFILFLQESIIPRSYIKLQYLSSKIAYENPVFQLKER 60 Query: 151 PWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK 210 +M + I + + ++ Sbjct: 61 TFMNNLENYSLYIDKVGRDKHAKGILIFENDKKSTFPVVL--VGHEAYWRDSSIVLEKAN 118 Query: 211 VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + + + S F + I + Sbjct: 119 FISFDEKGVRKLTGSFEDKRVELQAYFSDLKIKVKETEMMSIATLLQEMKGKTKEEKLIY 178 Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 + + + + +P V ++++ +S+ RS + + GI + F +++ I Sbjct: 179 KVEIHRKLALPFSSVMLSMLGVFLSIGHQRSGKKA-GILVGILTIFFYISLLNIGIVLAN 237 Query: 331 SGILLPVAAALIPVILTISLSILILL 356 G + + +P +L +L+ + L Sbjct: 238 VGKIPILLGVWLPNLLLAALTYRLYL 263 >gi|71083418|ref|YP_266137.1| permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062531|gb|AAZ21534.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 378 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 47/374 (12%), Positives = 120/374 (32%), Gaps = 17/374 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+++ K + L + I+++V+ + + E + P Sbjct: 1 MKKIVYKKLSKDCVNFFLLVVFTISIIIWVLQAVNYLDFVIEDGH-GFLVYFKYTLLSFP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II +I PF + + +ELVI GI +N F+ S+ + ++L+ Sbjct: 60 KIISRIFPFAIFLAFSYILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + I+ + + ++ I F K +I+ + Sbjct: 120 AVITPFAQDKARSFIRSSNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEK 179 Query: 181 SITIDKKNKI----IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + + I D + I+ K V+ + K ++ Sbjct: 180 TDINNSQTTFAKTAIVNIDNNKKILTLYDGKSINVINGKISEFEFSKTDYNISKFNSNTI 239 Query: 237 FQKFSEQFASRSFYEIIKK------------MSFSNKSNIFHNYRAETQFYFLIVIPLML 284 + +++ + + + + + + + Y +V PL + Sbjct: 240 TYQKTQEAKTINLIKCSLFFNGSIINSTNIEIENIKNCRLDNLKNVYKELYSRLVKPLYI 299 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + I+ L+ + I F+ + + ++ + ++ P+ Sbjct: 300 TFLISISLLFILKSKSDHSFNINKFKIYLFAFLFIIFLESSSKLISTNLMQNIFLSIFPL 359 Query: 345 ILTISLSILILLQK 358 ILT+ + + +++ Sbjct: 360 ILTLIIYLYFVIKL 373 >gi|265765250|ref|ZP_06093525.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263254634|gb|EEZ26068.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 636 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 79/268 (29%), Gaps = 4/268 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L + +++ +S A + Sbjct: 5 KRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGK-GLEMSVLAQFFFYSALSL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P +V + + N Sbjct: 64 VPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMRPLIVLVFAICCVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLKVQRKDR---KTGMLYDVIIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 AD + K + G + + + +++ + F E Sbjct: 181 DFSNNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLKAQSMSSKNVPYRRESFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + + F S SN Sbjct: 241 KHSIIQFDSDFNMADASIMSNQSTTKDM 268 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 34/110 (30%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + SF+ N F + + +++ I I L + I A + R + Sbjct: 347 NLSSDWGFKSFTMTQNDFSIRKHKIEWHRKITISLSCLLFFFIGAPLG-GIIRKGGLGMP 405 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + + Y I + G + + + L + + Sbjct: 406 VIVSVLTFIIYYIIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYK 455 >gi|187918662|ref|YP_001884228.1| hypothetical protein BH0808 [Borrelia hermsii DAH] gi|119861510|gb|AAX17305.1| hypothetical protein BH0808 [Borrelia hermsii DAH] Length = 355 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 105/347 (30%), Gaps = 3/347 (0%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 + F T L+ +IL+ + DL + N SIS + +P Sbjct: 4 DKLFVNNISLTFLFMNFLFVILIVLFDLFTNLFTYLD-HNLSISDIIYIYYLYLPKCFSD 62 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + L + NL+ +E++ + GISI ++L ++ S+ + + N + Sbjct: 63 GLALSFLFAVSNLIGNLSMRNEIIGLFSCGISISRILRSIIMLSVFISVLLFFFDNYLVI 122 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ + +II + + N + Sbjct: 123 DTVTKRDAFLKNSIGSKGANDRNIIIKDFAREIYNIRHYDIENDIIANLMIILKDQNDNF 182 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 KK I + + + V+ VE + + ++ + + Sbjct: 183 KKRYDISKAEWTNSRWRLYGVREFSKVERDVIEKFHEVLDGGGIVNLEPEYIKIIMLSSK 242 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + +F ++I + + N+ + F + + + + N Sbjct: 243 TLNFSKLISWIGALRRENLDSSEALFDFFSRIFFS--FRLILLSFTVGFVSFALKKNIFI 300 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + I + G L A+ +P IL I ++ Sbjct: 301 WSLLNSIAFAVVYVISIMVFSFLADLGYLPIFVASSLPTILFIIINF 347 >gi|298372198|ref|ZP_06982188.1| permease [Bacteroidetes oral taxon 274 str. F0058] gi|298275102|gb|EFI16653.1| permease [Bacteroidetes oral taxon 274 str. F0058] Length = 490 Score = 64.7 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 78/241 (32%), Gaps = 3/241 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M GI L Y + ++ + ++ ++ + + + M I A Sbjct: 1 MLGIKKLDLYVLRQFMTLLVVTFFISLFVIVMQFIWLRLDDMMGK-GIPIETMAKFFFYS 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +P L+ +++ F N+ EL+ + GIS+++++ ++ ++ I Sbjct: 60 SLAFTPMALPLAILLASLMTFGNMGERFELIAMKTAGISLFRIMRSLMIFIAMIVIGAFF 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + +K L+ +KD + + + + G Sbjct: 120 YSNYVIPMAQKRMWTLVYSFKDKALEIEIPVGEFYTGIRGVNIYARGRDTDKKAMTNVMI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + ++ + K + + + + IP + + F+ Sbjct: 180 YDFTKGFQSASVTAADTVRISTTEDKKYLKIDMKNGECFENVQQQQVGSNTIPYRRESFK 239 Query: 239 K 239 + Sbjct: 240 Q 240 >gi|291514071|emb|CBK63281.1| Predicted permeases [Alistipes shahii WAL 8301] Length = 500 Score = 64.3 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 74/247 (29%), Gaps = 3/247 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + R K YL + M ++ + + +++ S L + Sbjct: 1 MKTIHRLVLKSYLGPMVLTFFIVMFVLMMNIVWRYIDELVGK-GLSAGIIIELMTYFMAN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +P L+ I+ NL EL+ ++ G+S+ Q+ P ++ L+ + + + N Sbjct: 60 MIPMGLPLSMLLAAIMTMGNLGENYELLAMKSAGMSLVQITKPLIILVSLVSVGSFFIGN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + K + + + + + + H + + Sbjct: 120 NLVPNANKKLFSTLYDIRQQKQALEFQDGLFFNGIDNMSIRVSHQEPDTHLLHDVLIYDN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + I + + + K L V + +NS Sbjct: 180 RAANGNMNTIVADSGYIRLSDDKKYLL--VTLFHGETYEQTRNSQWFTKSALRHHTFDLQ 237 Query: 242 EQFASRS 248 +Q S Sbjct: 238 KQVIPMS 244 Score = 45.1 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 1/90 (1%) Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 YR++ +++ + +P+ ++ LI A + R + V + + Y I + Sbjct: 365 YRSKVEWHKKMSLPVSILIFFLIGAPLGA-IIRKGGLGLPVVVSVIFFVIYYMISLSGEK 423 Query: 328 FGKSGILLPVAAALIPVILTISLSILILLQ 357 K G V + + ++I + + Sbjct: 424 LAKEGNWEAVYGMWLSTFILTPIAIYLTYK 453 >gi|306842048|ref|ZP_07474721.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] gi|306287889|gb|EFM59309.1| permease YjgP/YjgQ family protein [Brucella sp. BO2] Length = 371 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/323 (11%), Positives = 97/323 (30%), Gaps = 8/323 (2%) Query: 39 QMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISI 98 + ++ +P I ++PF ++ +N+ SELV+ A G Sbjct: 6 NFLTTSGQTFQTIVQFSSLLIPSAIPLVMPFALIIAITQTLSTMNQDSELVVINASGAPR 65 Query: 99 WQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW------ 152 ++ P ++ + + + + L+ N + +I + + Sbjct: 66 SAVMRPILILAATVSVTSFLIANYVEPYARINMRAMIANASADLMHVIIQEGTFRKLADN 125 Query: 153 MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVV 212 + I ++ + + I I D+ ++ N +V+ + V Sbjct: 126 LYIQVAERRADGSIGGLFIADSRDPTLDLIYYAADGAIASTPSGDMLLMENGEVQRRNVS 185 Query: 213 EYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + I D + LN + ++ ++ Sbjct: 186 DGTVSIIKFDSYAFDLNQFASAGDDFVIFAKDRPLTYLLNPDPNDPMLQTRPLTYRAELH 245 Query: 273 QFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSG 332 + + + PL+ AM +A + R + I + ++Y Sbjct: 246 RRFTQWIYPLI-FAMIALAIAGDSRSHREARVSAS-FSAISTALLVYWAGYFASDRADKD 303 Query: 333 ILLPVAAALIPVILTISLSILIL 355 + L+P+++ + ++L Sbjct: 304 SSYILVMYLVPLVVFLVTGFILL 326 >gi|300772186|ref|ZP_07082056.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300760489|gb|EFK57315.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 494 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 33/279 (11%), Positives = 89/279 (31%), Gaps = 5/279 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I + ++K + M ++ ++ L + + + + L + Sbjct: 1 MKKI-HLLILQSFIKPFIVTFCIVMFVLLMLFLFKYIDDLIGK-GFEWYVILQLIGYQCA 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +Q +P L+ +I+ F NL + ELV +A G+S+ + + P + L + L Sbjct: 59 VQMQMALPLSMLLSSIMTFGNLGESYELVAIKAAGVSLRKAMTPLFILVALFSAGSFLFS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + I L+ ++ + K + + Sbjct: 119 DYILPVVNLKMGSLLYDVRNKKADFLIKPGIFNNTIPGYAIRAKSKSKDGTVLNELMIYD 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + N ++ K+ + ++ V++ + G + F +F Sbjct: 179 HTSGSSSNNVLLAKEGFVQNSPDNSYM---VLKLKDGIRYEESKGKDSKSYDPRKQFVRF 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 + + F +M ++++ ++ + Sbjct: 236 QFKETEQKFDMGDFQMKRTDENLFKSHHAMLNLRQLKMY 274 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 67/221 (30%), Gaps = 1/221 (0%) Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 +++ +QK D+ + + + ++ + D Sbjct: 234 RFQFKETEQKFDMGDFQMKRTDENLFKSHHAMLNLRQLKMYTDSNHRQMDSVGRMAEHDI 293 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 Y ++ ++ KN +P S SR E + Sbjct: 294 RNYYNYYSNYFRSPGMKIVPAKVKPFKNLLEDVVPATERRQIVGSAMTQSRYITETLGNK 353 Query: 257 SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGF 316 + K+ + R +F+ + + + + I A + R + V I Sbjct: 354 TLEYKAFRDKDIRYRLEFHRKFTLAVSCLLLFGIGAPLGA-IIRKGGLGLPVVMAIIFFL 412 Query: 317 MLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + I T+ + K L P+ + +I+ L+I + + Sbjct: 413 IYHIISTVSEKAAKDASLAPMTGMWMAIIVLTPLAIFLTYK 453 >gi|255764468|ref|YP_003064806.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254547819|gb|ACT56866.2| permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 361 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 115/358 (32%), Gaps = 8/358 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 Y + ++ L L + + +VI + + N + S++ ++ +P Sbjct: 1 MKSFELYILRCIGRSFLMSCLFIVFIAWVIQILQRINLVSSSTE-SLNILLKISGYLIPT 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ + PF + V ++NR +EL+I G S L+ P + +ILL IF + N Sbjct: 60 VLPMVTPFCFAMETTNVLTSMNRNTELLIIDNTGTSRITLIKPVLFLAILLSIFLFISEN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ--ISNPQQDIFIGAKKILPENHIWEDF 179 I L + + + + + + L I + Sbjct: 120 IIEPKCRSTIKQLSAKAQLALTFSYLEENLFFRLDDDLYIKISKYNPNNTLQGIFIVDSR 179 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + T D D I + ++ + + S TL Sbjct: 180 DTQTHKIYYAQSGSIDLDRQAIILNDGEVHRKSPISKDISIMKFKSYTLQTESANSSTIV 239 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + SF + + + + YR+E + ++ + I A+ Sbjct: 240 LKANDQNLSFLLNPNPNNPNYRPELLETYRSEFHKRLTQWLFPVIFGLISIVAADKRALV 299 Query: 300 RSNQPRIIVAYGIFSGF-MLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + + F + + I+ ++ +P+ + L SI +L+ Sbjct: 300 RQRKKIHPIFISLSISFGVFWGFSYIIHKIEQNPYYIPILY----LFLFCISSIFLLM 353 >gi|91762159|ref|ZP_01264124.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717961|gb|EAS84611.1| Predicted permease YjgP/YjgQ family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 378 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 47/374 (12%), Positives = 120/374 (32%), Gaps = 17/374 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+++ K + L + I+++V+ + + E + P Sbjct: 1 MKKIVYKKLSKDCVNFFLLVVFTISIIIWVLQAVNYLDFVIEDGH-GFLVYFKYTLLSFP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 II +I PF + + +ELVI GI +N F+ S+ + ++L+ Sbjct: 60 KIISRIFPFTVFLAFSYILLKYENKNELVIFWNFGIKKINFINFFIKFSLWFVLISLLLN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I + I+ + + ++ I F K +I+ + Sbjct: 120 AVITPFAQDKARSFIRSSNLDFFESVLKPKKFIDIIGNLTIYFDEKNKKGELINIFLNEK 179 Query: 181 SITIDKKNKI----IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + + I D + I+ K V+ + K ++ Sbjct: 180 TDINNSQTTFAKTAIVNIDNNKKILTLYDGKSINVINGKISEFEFSKIDYNISKFNSNTT 239 Query: 237 FQKFSEQFASRSFYEIIKK------------MSFSNKSNIFHNYRAETQFYFLIVIPLML 284 + +++ + + + + + + + Y +V PL + Sbjct: 240 TYQKTQETKTINLIKCSLFFNGSIINSTNIEIENIKNCRLDNLENVYKELYSRLVKPLYI 299 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + I+ L+ + I F+ + + ++ + ++ P+ Sbjct: 300 TFLISISLLFILKSKSDHSFNINKFKIYLFAFLFIIFLESSSKLISTNLMQNIFLSIFPL 359 Query: 345 ILTISLSILILLQK 358 ILT+ + + +++ Sbjct: 360 ILTLIIYLYFVIKL 373 >gi|218264803|ref|ZP_03478497.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] gi|218221776|gb|EEC94426.1| hypothetical protein PRABACTJOHN_04207 [Parabacteroides johnsonii DSM 18315] Length = 655 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 3/273 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L+ + + +L L + +V + L + M I A + Sbjct: 1 MLKIKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGK-GLGIPVLAEMFMYA 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 ++ +P L+ +++ F NL EL+ ++ G+S+ ++ P ++ ++ I Sbjct: 60 ALFLVPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLVHIMRPLIITISMISIGAFF 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + L+ + + + Sbjct: 120 FQNYAMPVVQVKLYTLLWSMRQKSPELDIPEGVFYSEITGFNVYVKHKDTETGLLRDMMI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + K ++ L + + + + R ++STT + Sbjct: 180 YDYSEGFNKVSVMVADSGRLKTSADKMFLVLSLFNGESFRSLDKQSSTTGAKSSVPYQRE 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAE 271 F + F + S N F Sbjct: 240 TFKSRDILIEFDANFSRTDESFMQNQFMGKNMH 272 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + R T+++ + + I A + R + V + Y I I Sbjct: 387 YRVRRHLTEWHKKFTLSFACMVFFFIGAPLGA-IIRKGGLGMPVVISVILFIFYYIIDNI 445 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + + L I + + Sbjct: 446 GFKMARDGVWEAWQGMWLSSAILAPLGIFLTYK 478 >gi|240116444|ref|ZP_04730506.1| hypothetical protein NgonPID1_09463 [Neisseria gonorrhoeae PID18] gi|260441666|ref|ZP_05795482.1| hypothetical protein NgonDG_11382 [Neisseria gonorrhoeae DGI2] gi|268602116|ref|ZP_06136283.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268586247|gb|EEZ50923.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] Length = 371 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 38/352 (10%), Positives = 113/352 (32%), Gaps = 6/352 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R K T + + + ++ + + + +I L V + Sbjct: 2 IYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAAD-GRVAIDAVLALVGFWVIGMT 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + + V R SE+ + + G+++ Q ++P + ++ I ++ + Sbjct: 61 PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWISPVMQFAVPFAILIAVMQLWV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 E + + K + + + + ++ + E+ I ++ Sbjct: 121 IPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVY-FVETFDTESGIMKNLFLRE 179 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 DK + ND + ++ + K++ + + Sbjct: 180 QDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPGRADYNQVSFQKLNLIISTTPK 239 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + + S+ + + + + I + + ++ + L+A +S RS Sbjct: 240 LIDPVSHRRTISTAQLIGSSNP---QHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGH 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + I + +T++ + G + L I+ ++I++L Sbjct: 297 T-YNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLPMHIIMFVIAIVLL 347 >gi|320101900|ref|YP_004177491.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] gi|319749182|gb|ADV60942.1| permease YjgP/YjgQ family protein [Isosphaera pallida ATCC 43644] Length = 392 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 47/378 (12%), Positives = 115/378 (30%), Gaps = 31/378 (8%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRG---AVLAATRVP 60 IL R + ++K + + L VI ++ G+ + R+ Sbjct: 7 ILDRQRYWSFVKAYVICFSSLVGLYIVIHAFANVDEFGKAAPGLMGVVRAMGFYYLIRIS 66 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 Q+ I ++ I + + ++LV A GIS + + P +V S+L+ + V+ Sbjct: 67 QYYDQLCGVIAMMAAIFTVTFMQKDNQLVAMLAAGISTHRAIRPVLVCSVLVSLLAVINQ 126 Query: 121 NPIATSGE-----------------KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 I + DL + ++ + + P Sbjct: 127 ELILPRFQTELSLKPDDDGKRPLPVSNLYDLNEIPIHGRKADRARRAMILNATLPIGLTG 186 Query: 164 IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + + K ++ + ++ LKK+ ++ P Sbjct: 187 TLRELEARDALHIPHDHPTAPLKGGWLLRGATISPPLEEDEVGPLKKLSRHELNGFPPST 246 Query: 224 ---------NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFS-NKSNIFHNYRAETQ 273 + + + + + + ++ + SN + Q Sbjct: 247 LSQAELGGSDEQSYFFFTNITFEMLTRDPKEWMQYASSGQLIAALGDPSNAADHLAISIQ 306 Query: 274 FYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 + ++ P + +A+ L I + Y + + + Y + + + G Sbjct: 307 LHQRLLRPFLSLALLCAVLPSVLGGPNR-NMFISLGYALGTTALFYGGLFLFQYLATRGA 365 Query: 334 LLPVAAALIPVILTISLS 351 + P+ AA P+ + L+ Sbjct: 366 ISPIDAAFAPLAVFSLLA 383 >gi|297250819|ref|ZP_06934296.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] gi|296837907|gb|EFH21845.1| permease, YjgP/YjgQ family [Neisseria polysaccharea ATCC 43768] Length = 181 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 64/176 (36%), Gaps = 2/176 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y+ ++ ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGNLGK-GSYNGAKLGQYVLMQMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL ++ I T + Sbjct: 60 HAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGLIFAIATAALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 IA + + ++ NG + W++ I + Sbjct: 120 WIAPALSQKAENIKAAAI-NGKISAGNTGLWLKEKTALSMCAKCCPTIRFWASKFG 174 >gi|16125936|ref|NP_420500.1| hypothetical protein CC_1691 [Caulobacter crescentus CB15] gi|221234699|ref|YP_002517135.1| hypothetical protein CCNA_01762 [Caulobacter crescentus NA1000] gi|13423102|gb|AAK23668.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963871|gb|ACL95227.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 379 Score = 64.3 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 95/306 (31%), Gaps = 7/306 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY F+ L TL + L + + + E S + +P Sbjct: 1 MRLIERYLFRQLLGPTLLATAALVALALLARSLSEFDVLVEQR-QSALVFLKIILLALPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V +V L+ E+V+ A G+S W++++P + +++ + +++ Sbjct: 60 LLGIMMPLALFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAMRLAVIAALISLISGL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + Q K + + + + +++ Sbjct: 120 WLQPWSARQIRETAFQIKTDVAATLVQPGQFTEPGPGLTVYAQSIDRDNKIQNLFIHQEL 179 Query: 182 ITIDKKNKIIHRKDADLAIIYN---DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + + T ++ + Sbjct: 180 PNGAASTYSSREAEIATRKGEPVLIMRHGSNQQFSRDGVLQYTSFDEYTFDLSSLFHSDE 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAM--TLIAASVSL 296 + A R +E+ + + + + + + PL +A+ +AA + Sbjct: 240 LLHYKIADRYPHELF-FPDLTQEWEQRNKDKLLAEGHSRFAGPLYNIALMSMALAAVLGG 298 Query: 297 EFSRSN 302 FSR Sbjct: 299 SFSRMG 304 >gi|325103111|ref|YP_004272765.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] gi|324971959|gb|ADY50943.1| permease YjgP/YjgQ family protein [Pedobacter saltans DSM 12145] Length = 476 Score = 64.0 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 72/245 (29%), Gaps = 5/245 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I K ++K M ++ ++ L + + + + L Sbjct: 1 MKKI-HLLIVKAFIKPFFVTFFIVMFVLLMLFLFKYIDDLIGK-GFEWYVILQLLGYAAA 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ +I+ F NL ELV ++ GIS+ + + P + L I + Sbjct: 59 TNVAMALPLAVLLSSIMTFGNLGENYELVAIKSAGISLQRAMAPLFIMVTGLSIAAFIFS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + L+ ++ + + K + Sbjct: 119 DYMLPVANLKMGSLLYDVRNQKAAFLIEEGVFNNSIPGYSIRVEQKDKDGKTLKDVVIYD 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKV---KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 ++ ++ ++K LK V Y+ N + K D Sbjct: 179 HTKGSGNTNVLMADTGEMYKTDDEKYLVLVLKHGVRYEESAGQRTYNPRERLVRYKFDET 238 Query: 238 QKFSE 242 + + Sbjct: 239 MQKFD 243 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 32/89 (35%), Gaps = 1/89 (1%) Query: 269 RAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSF 328 R ++ + + + + I A + R + V + + + I TI + Sbjct: 363 RYIIEYNRKFTLSVSCLVLFFIGAPLGA-IIRKGGLGLPVVVSVIFFLIYHIISTIGEKM 421 Query: 329 GKSGILLPVAAALIPVILTISLSILILLQ 357 + G + P+ I + + L + + + Sbjct: 422 ARDGTISPLLGMWIAIFVLTPLGLFLTYK 450 >gi|330890526|gb|EGH23187.1| hypothetical protein PSYMO_17673 [Pseudomonas syringae pv. mori str. 301020] Length = 231 Score = 64.0 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 58/160 (36%), Gaps = 1/160 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 A G LI + + + + + + + Sbjct: 121 APQGATQFSLLINKQDAMTEFDTLVPGRFQALRDGTRITY 160 >gi|330975728|gb|EGH75794.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 243 Score = 64.0 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 1/160 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ + L SE+ + A G+S +LL + + L+G+ + + Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 A G LI Q + + + + + + Sbjct: 121 APQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITY 160 >gi|330883204|gb|EGH17353.1| hypothetical protein Pgy4_30756 [Pseudomonas syringae pv. glycinea str. race 4] Length = 139 Score = 64.0 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 1/131 (0%) Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 ++ + S S + + N R F+ ++ P + VA Sbjct: 8 RWDVALSPQLLSTVIMPPESLSISGLWNYAHYLADQG-LSNGRYWLAFWTKVLQPAVTVA 66 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 + L+A S RS V G+ GF I ++ P+ A L+P Sbjct: 67 LVLMAISFIFGPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLMPAAA 126 Query: 347 TISLSILILLQ 357 + +L + Sbjct: 127 CALAGVYLLRR 137 >gi|317060239|ref|ZP_07924724.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313685915|gb|EFS22750.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 265 Score = 64.0 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 25/261 (9%), Positives = 67/261 (25%), Gaps = 3/261 (1%) Query: 96 ISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 + I +L P + F + + I L + + +M Sbjct: 1 MDIRAILKPILYLGFASMFFILFLQESIIPRSYIKLQYLSSKIAYENPVFQLKERTFMNN 60 Query: 156 SNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ 215 + I + + ++ + + Sbjct: 61 LENYSLYIDKVGRDKHAKGILIFENDKKSTFPVVL--VGHEAYWRDSSIVLEKANFISFD 118 Query: 216 YGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY 275 + S F + I + + + + Sbjct: 119 EKGVRKLTGSFEDKRVELQAYFSDLKIKVKETEMMSIATLLQEMKGKTKEEKLIYKVEIH 178 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + +P V ++++ +S+ RS + + GI + F +++ I G + Sbjct: 179 RKLALPFSSVMLSMLGVFLSIGHQRSGKKA-GILVGILTIFFYISLLNIGIVLANVGKIP 237 Query: 336 PVAAALIPVILTISLSILILL 356 + +P +L +L+ + L Sbjct: 238 ILLGVWLPNLLLAALTYRLYL 258 >gi|194426241|ref|ZP_03058796.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|194415549|gb|EDX31816.1| putative permease, YjgP/YjgQ family [Escherichia coli B171] gi|195183222|dbj|BAG66767.1| putative permease [Escherichia coli O111:H-] Length = 285 Score = 64.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 85/284 (29%), Gaps = 2/284 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY ++ + L +L + + Y ++ ++ +P Sbjct: 1 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVS-PGGYRWTQAVLVVLMTLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + ++ PFI L+ IV L++ SEL R+ G SI+++ +V IL + + Sbjct: 60 TLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A+ ++ + + G+ + + + Sbjct: 120 WVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYR 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ I R + ++ ++ S Sbjct: 180 DDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELS 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 S S ++ +++ ++ + + P+ + Sbjct: 240 MPGNSFSVRQLNHYINYLQETGQPS-SEYRLALWEKLGHPIFDL 282 >gi|282860179|ref|ZP_06269254.1| putative membrane protein [Prevotella bivia JCVIHMP010] gi|282587068|gb|EFB92298.1| putative membrane protein [Prevotella bivia JCVIHMP010] Length = 633 Score = 63.6 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 71/222 (31%), Gaps = 1/222 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L + K + ++ ++ + L + + ++ A + Sbjct: 4 FKKLDIFIAKQFGMLFTGTFFISLFVLMMQFLWRSIDDLIGK-GLTVDVLAQFFGYMALM 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ Q +P L+ +++ + NL +SEL ++ GIS++Q + +IL+ I + N Sbjct: 63 LVPQALPLAVLLSSLMTYGNLGESSELTAIKSAGISLFQSFRGLIATTILITILSFYFQN 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +K L+ K + + + + + Sbjct: 123 NVAPIAQKHIYQLLISMKQKSPELEIPEGVFYDGIPQTNLYVEKKDLNTGHLYNIMVYRM 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + II L K + + ++ + Sbjct: 183 TDSYEDQAIILADSGMLQSTAEKKHLILNLWNGEWFENMRSQ 224 Score = 43.5 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 8/95 (8%), Positives = 24/95 (25%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + + + L + I A + R + + + + Y + Sbjct: 363 GDKLLRQHAIEEINKFTLALTCLIFFFIGAPLGA-IIRKGGLGLPIIISVLVFIIFYILD 421 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G + + I ++I + Sbjct: 422 NTGYKMSRQGDWAIWFGKGLSPAVLIPMAIFFTYK 456 >gi|222823976|ref|YP_002575550.1| permease, YjgP/YjgQ family [Campylobacter lari RM2100] gi|222539198|gb|ACM64299.1| putative permease, YjgP/YjgQ family [Campylobacter lari RM2100] Length = 341 Score = 63.6 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 117/357 (32%), Gaps = 21/357 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++++Y F +L T L +V ++ ++ S+ L +P Sbjct: 1 MKLIYKYLFNQFLNTMLSLFFTLFTIVSIVFFI-QLAKITSYVEISLLELFQLYIYLLPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P + + F+ L+R +E + A+GIS + + F+ + +L F ++V+ Sbjct: 60 ALAFTLPISFFIALTLSFYRLSRENESTVLFALGISPKFIASFFMKIAGVLSAFMLVVVL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ + + K + + I + + +N I Sbjct: 120 VFIPISFELFDNFVDYKKISTKINIKTGEFGQRYGEWLVFINTQDENNVYKNIIMYHPKK 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK+ I+ + L + Y++ +S K Sbjct: 180 NEDDKEQIILASEGKLENQNGIVSFVLNQGKAYEFKEENWHISSF------------KNL 227 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + ++ K + S++ + +F +I L +A L A S + R Sbjct: 228 LIKSKLYSKDLNTKHFYDYWSDLNTSKEKAKEFVIYTLIALFPLASVLFALSFGIVTYRY 287 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + F +T++ P+ A + IL +S+S +K Sbjct: 288 EKGFAYFGI-FAVIFAYFTLLVSFYK-------PPLLAVGVIFILFLSISAFYFKKK 336 >gi|313672806|ref|YP_004050917.1| permease yjgp/yjgq family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939562|gb|ADR18754.1| permease YjgP/YjgQ family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 345 Score = 63.6 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 110/354 (31%), Gaps = 17/354 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L +Y + + I + + D + N +P Sbjct: 1 MNK-LSKYILEE-IYPIFIISNIFFIFILLFDKVVDLTDLVFSKNVPTIIIIETFIFYLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IP L+ + L+ +ELV+ +++G+S LL P + IL + L Sbjct: 59 SFMMVTIPTSALLAVMTAHNRLSSDAELVVMKSLGLSPMSLLKPTIYFGILATLLAFLTS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI-WEDF 179 + G K I +++ + + + + I D Sbjct: 119 FYLLPYGNKYAIYNLKRTVEYVSLKDIKENEFYKEIPSIAIYVKKKVDDNKFLQITLIDE 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 ++ + + + + + +YG+I K +N+ ++ K Sbjct: 179 KGGSLITAAEADAYQKFGAVVFDLKNGAIIQGKNDRYGKIEFKKFYFVVNVDSNLNREIK 238 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 Y + +F + +P + M L+ ++ + F Sbjct: 239 SERFMFMDELISRFN-----------DGYIYKFEFSKRVALPFSTLIMALLGLNMGVFFH 287 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 R+N+ + + F I+ + ++ G + P A I + LS++ Sbjct: 288 RANRSINWI-IALGIIFSYNVIMFMSENLA--GKINPYFAPWIANTIFAFLSLI 338 >gi|16125010|ref|NP_419574.1| hypothetical protein CC_0757 [Caulobacter crescentus CB15] gi|221233731|ref|YP_002516167.1| hypothetical protein CCNA_00794 [Caulobacter crescentus NA1000] gi|13421992|gb|AAK22742.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220962903|gb|ACL94259.1| conserved membrane spanning protein [Caulobacter crescentus NA1000] Length = 397 Score = 63.6 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P L RY + L L+ M+ + L + + + + A L P Sbjct: 4 PNTLDRYLLRRTLAPMSAVLISTMVAFLMERLMRSFDLLSQTTE-GLRYLAELLVNLTPH 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P + VV LN++SE+ A G S+ + PFV +LL + +V++ Sbjct: 63 YVGLTLPGGFFIGLFVVVNGLNKSSEIDAILASGTSLTRFTAPFVAMGVLLMVLSVILFG 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ ++ G + + Sbjct: 123 FVQPYSRYAYHAVLHAAENAGWNGDVRPKALLSAGSDFFLTADRTDASGRYLQQVFIRRI 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG----- 236 +++ + + + L+ Q + ++ + D Sbjct: 183 DPNGREDILTAVSAVVHKNPADSHIALELTNGRQISTVAGAQSYVVNFSRLMFDVPSGDA 242 Query: 237 --FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + E + + E+ ++ + + + L L+L + LIA Sbjct: 243 GLLRLRGEDVSELTLIELARQGFGLEPAALPRETLLAALYARLARA-LILPLLPLIAVPF 301 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 L R+ + A G+ F ++ + + + + + A +P Sbjct: 302 GLSAKRAGSGAAVAAGGVLL-FAFEILMVLGQ--ATAPRVTALVAIALP 347 >gi|325853208|ref|ZP_08171296.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] gi|325484384|gb|EGC87307.1| permease, YjgP/YjgQ family [Prevotella denticola CRIS 18C-A] Length = 703 Score = 63.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 33/282 (11%), Positives = 82/282 (29%), Gaps = 5/282 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L + + + ++ ++ + L + + S+ Sbjct: 60 MFRIRKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGK-GLSMDVLGQFFWYM 118 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +++ Q +P L+ +++ + NL +SEL ++ GIS+ Q +V S+L+ + Sbjct: 119 SLMMVPQALPLAILLSSLISYGNLGESSELTAIKSAGISLVQSFRGLIVISVLIACGSFY 178 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + S +K L+ K + + + + Sbjct: 179 FQNNVGPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMV 238 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + II L K + + ++ + + + Sbjct: 239 YRMTDSYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQEMG--SSASVPYRRE 296 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 F+ + F + SN + + Sbjct: 297 TFTHKHIVLDFDGDFNLTDMAGISNDARTKSITKIQHDKDSL 338 >gi|229495721|ref|ZP_04389449.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] gi|229317295|gb|EEN83200.1| permease, YjgP/YjgQ family [Porphyromonas endodontalis ATCC 35406] Length = 658 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 9/107 (8%), Positives = 31/107 (28%), Gaps = 1/107 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + E+ + ++ ++ + + P+ + I + R + Sbjct: 373 NMTELATFWDGAYQAEAYNFRSHSQERHRKFTFPVACIVFFFIGVPLGA-LIRKGGIGMP 431 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + I + Y I T+ + +G + + + + Sbjct: 432 MVASILLFVVYYMIDTLGFNLSYNGTWPTWLGMWFSTFILLPIGAFL 478 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 61/189 (32%), Gaps = 1/189 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P ++ Y + ++ + + +V + L +++ L + Sbjct: 6 PKRMYTYIIQQFMPLLVMTFVICWFVVLMQMLWSRADEIVGR-GLDTWVLIQLLFHAAVM 64 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P L+ +++ F L EL+ ++ G+ ++++++P V I +G+ + +N Sbjct: 65 ALPTATPLGILLASVMTFGGLGERLELLAMKSAGVPLYRIMSPLFVVGITIGLALFVYLN 124 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +I + + + + H + Sbjct: 125 TAMMDAQVKFFQIIFSAQQSRPDLEIPQGVFYNQIPGYSLFVKKKDHENRTLHELMIYDF 184 Query: 182 ITIDKKNKI 190 + +I Sbjct: 185 SRGSSQPRI 193 >gi|294508120|ref|YP_003572178.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] gi|294344448|emb|CBH25226.1| Conserved hypothetical protein containing permease domain [Salinibacter ruber M8] Length = 492 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 37/118 (31%), Gaps = 1/118 (0%) Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +RS I+ + + + +FY I L + ++ A + L Sbjct: 352 SPAVQRARSAQSAIQNIRRDTEWQTRRIRSYQVEFYKKFSIALACLIFMVVGAPLGLAL- 410 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R I A + + + + + + G P I +L + ++L Sbjct: 411 RRGGLATIGAVALGIFMLYWITLVQGEKLSERGFFPPWLGMWIANLLMSGAGLWLILY 468 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 1/157 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L + +L M L+ + L ++ +S L A + Sbjct: 20 MLRRLHWIVLRRLPGPFFGWLGTLMFLLLMQFLIRWLPEIAGK-GIPVSVIVELIAYNLA 78 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ +P L+ ++ F L + + ++ GIS Q++ P +V + LL + Sbjct: 79 YMVVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALVVAALLMGGMLYFN 138 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN 157 N + L + + + + Sbjct: 139 NVMLPEANHRARQLWSDIRGKRPGFELRPGIFYEDME 175 >gi|253572213|ref|ZP_04849617.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298387973|ref|ZP_06997521.1| permease [Bacteroides sp. 1_1_14] gi|251838393|gb|EES66480.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298259239|gb|EFI02115.1| permease [Bacteroides sp. 1_1_14] Length = 632 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 79/270 (29%), Gaps = 4/270 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLDMSVIAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 64 VPISLPLAILLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 124 VGPIAQTKLYTLIISMKQKSPELDIPEGVFYSEIP---DYNLKIAKKNRKTGMMYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + H AD + K + G + + S ++ ++F E Sbjct: 181 NLKDGFENAHIIYADSGRMEMTADKQHLWLHLYSGDLFENLRSQSMKSQNVPYRREEFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + F S SN Sbjct: 241 KHTIIEFDSDFNMADASIMSNTSAAKDMSM 270 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 24/259 (9%), Positives = 65/259 (25%), Gaps = 2/259 (0%) Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEK-IGIDLIQQWKDNGDKQKSDIIPWMQISNP 158 ++ + L +++ + + + K + ++ + Sbjct: 198 RMEMTADKQHLWLHLYSGDLFENLRSQSMKSQNVPYRREEFREKHTIIEFDSDFNMADAS 257 Query: 159 QQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR 218 AK + + + + K V + Sbjct: 258 IMSNTSAAKDMSMLQASIDSMKMVGDSIGRQYYREVSEGNFRSTYGLTKEDTVKIMEANI 317 Query: 219 IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 + +S P+ S + + I S++ S+ + + E +++ I Sbjct: 318 TEYNIDSLYEVAPLMQKQKVISSAASRAENLSSDINFKSYTMGSHDYSMRKHEIEWHKKI 377 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 I L + I A + R + V + + Y I + G + Sbjct: 378 TISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVMVFIIYYIIDNTGYKMARDGRWVVWM 436 Query: 339 AALIPVILTISLSILILLQ 357 + L + + Sbjct: 437 GVWTSSAVLAPLGAFLTYK 455 >gi|163788154|ref|ZP_02182600.1| hypothetical protein FBALC1_07233 [Flavobacteriales bacterium ALC-1] gi|159876474|gb|EDP70532.1| hypothetical protein FBALC1_07233 [Flavobacteriales bacterium ALC-1] Length = 637 Score = 62.8 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 21/234 (8%), Positives = 55/234 (23%), Gaps = 9/234 (3%) Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 ++I + + + + + + +NH Sbjct: 191 NRYQEIINKNRSKNKNLPHTNSYFDKYIINVDLEILNTGDLDEKNHTDRYSMLDVEQLNY 250 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEY--------QYGRIPIDKNSTTLNIPIKMDGFQKF 240 I KD L Y + + Sbjct: 251 TIDSLKDKRRNDYKALSNTLYNRSNYSALNLNIDTLRTDSLYTGNILDLFSNNQKIQITN 310 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +S S +I+ + + + + V+ + + + A + R Sbjct: 311 LAINSSNSTRQILDSNKKTFEKKSIILNKHIIVLHDKFVLAFACIILFFVGAPLGA-LIR 369 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I Y K+ + G P+ + + + + LS+ + Sbjct: 370 KGGLGLPMVIAIVLFLTYYFFGIFAKNSAEKGSFSPILGSWLSTAIMLPLSVYL 423 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 5/235 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M + + + ++ + ++ A +P +I ++P L+ +I+VF N Sbjct: 1 MFIFVLQGVWLYIAELAGK-DLDVAVTAKFIMYYMPKLIPLVVPLTVLLSSIMVFGNFAE 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 E ++ GIS+ + + V + LGI N + GE +L + Sbjct: 60 NYEFAAMKSTGISLQRAMRSLSVFIVALGIGCFFFANNVIPWGEYNFYNLRRNIAKKKPA 119 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPE-NHIWEDFTSITIDKKNKIIHRKDADLAIIYN 203 + +I N + + ++ S T +I K+ +L + Sbjct: 120 LAIAEGQFNEIGNINIKVEEKSGDNGQFLKNVIIHEKSKTRGGNYTVIASKNGELKSSPD 179 Query: 204 DKV---KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKK 255 + +L YQ + L + + ++ +K Sbjct: 180 SNILQLELTNGNRYQEIINKNRSKNKNLPHTNSYFDKYIINVDLEILNTGDLDEK 234 >gi|326797997|ref|YP_004315816.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] gi|326548761|gb|ADZ77146.1| permease YjgP/YjgQ family protein [Sphingobacterium sp. 21] Length = 505 Score = 62.8 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 86/267 (32%), Gaps = 1/267 (0%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 K + K + M ++ ++ L + + + + L I +P Sbjct: 22 VLKAFFKPFIVTFFIVMFVLLMLFLFKYIDDLIGK-GFEWYVILELLWYASAAQISMAMP 80 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 L+ +I+ F NL + ELV +A GIS+ + + P ++ L+ I + + I Sbjct: 81 LAMLLSSIMTFGNLGESYELVAIKAAGISLRKAMMPLIILVSLISIGSFFFSDYILPVTN 140 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 L+ ++ + K + + I + Sbjct: 141 LKMGSLLYDVRNKKADFLIKDGIFNNSIPGYSIRAKNKSKDGTVLYNLIIYQHGNISRGT 200 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 ++ K+ + ++ + K+ + + + + +EQ S Sbjct: 201 NVLLAKEGVMYNSRDNNYMILKLKDGVRYEETTAGDRSYNPRQQFTRYYFDQTEQKFDMS 260 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFY 275 +++ + KS+ + ++Y Sbjct: 261 TFQMKRTDEDLFKSHSMMLNLKQLRYY 287 Score = 49.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 1/94 (1%) Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 R +++ + + + + I A + R + V I + + I T Sbjct: 375 DLSIVRYILEYHKKFTLAVSCLLLFSIGAPLGA-IIRKGGLGLPVVMAIIFFLIYHIIST 433 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + K G + PV +I L I + + Sbjct: 434 VAEKSAKEGNIDPVLGTWTAIIALTPLGIFLTYK 467 >gi|295134703|ref|YP_003585379.1| permease [Zunongwangia profunda SM-A87] gi|294982718|gb|ADF53183.1| permease [Zunongwangia profunda SM-A87] Length = 407 Score = 62.8 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 41/160 (25%), Gaps = 8/160 (5%) Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM-------S 257 V P + + +D + Q Sbjct: 217 MYSRTGVKSLDINFNPEESDKYKSFKHSILDNYNSNQSQRIVDDAIRTTNAAISHLSIKK 276 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 K + + E + V+ + + + + A + R + + I Sbjct: 277 QEFKQSSRRLNKYEIALHEKYVLAVACIVLFFVGAPLGA-IIRKGGMGLPMVIAIIIFLS 335 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I K+ + G + P A + ++ + L I + Sbjct: 336 YHFIGIFAKNSAEDGSISPFIATWLSTLIMLPLGIYFTYR 375 >gi|167004981|ref|ZP_02270739.1| hypothetical protein Cjejjejuni_01670 [Campylobacter jejuni subsp. jejuni 81-176] Length = 351 Score = 62.8 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 36/348 (10%), Positives = 101/348 (29%), Gaps = 6/348 (1%) Query: 10 FKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPF 69 F+ K Y++ + IDL + + N + L+ + VP ++P Sbjct: 8 FRDLFKKFFYYIFSLLGFYCGIDLLLNFKDLPKAANLDLLYVMFLSFSAVPY----VLPI 63 Query: 70 ITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEK 129 + +V ++ R +E V A+G+S ++ + ++ + + Sbjct: 64 SLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWALFFCCIYIGLNFTSFAYAND 123 Query: 130 IGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNK 189 ++++ + + + + D + Sbjct: 124 YKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSAQNIKIFNINDLNLSSFVSAKN 183 Query: 190 IIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSF 249 ++ + N + K G D + K + + Sbjct: 184 AHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELKSLEGFKPKIIEGVASNSDYSIS 243 Query: 250 YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVA 309 + K+ + + Y + P + LI +R I+ Sbjct: 244 DALESF--ELFKAQNVNTDTLKINLYKFVFTPFFAPFLMLIMYYFFPVIARFFNLAIVTF 301 Query: 310 YGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 M++ ++ ++ ++ ++ ++P+I+ LS + + Sbjct: 302 VTFVVTLMIWGVLFLLTRLSENSVIASEIGIVVPIIILGCLSAYMYYK 349 >gi|299147702|ref|ZP_07040765.1| putative permease [Bacteroides sp. 3_1_23] gi|298513885|gb|EFI37771.1| putative permease [Bacteroides sp. 3_1_23] Length = 638 Score = 62.8 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 11 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 69 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 129 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIY 186 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + H AD + K + G + + + +L + F E Sbjct: 187 NMKDGFENAHIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSLKSQNVPYRRESFRE 246 Query: 243 QFASRSFYEIIKKMS 257 + F + Sbjct: 247 KHTIIEFNSDFNMVD 261 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 360 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 418 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + + Sbjct: 419 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGVFLTYK 461 >gi|315922632|ref|ZP_07918872.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696507|gb|EFS33342.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 632 Score = 62.8 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + H AD + K + G + + + +L + F E Sbjct: 181 NMKDGFENAHIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSLKSQNVPYRRESFRE 240 Query: 243 QFASRSFYEIIKKMS 257 + F + Sbjct: 241 KHTIIEFNSDFNMVD 255 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 354 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 412 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + + Sbjct: 413 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGVFLTYK 455 >gi|254669826|emb|CBA04196.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 182 Score = 62.8 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 2/156 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY + +Y LL + L ++ +G+ +Y I A ++P Sbjct: 1 MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGK-GSYGIWEMLGYTALKMPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +++P L+ +V L SEL + +A G+S +LL + I TV + Sbjct: 60 RAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLILSQFGFIFAIATVALGE 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN 157 +A + + ++ NG + W++ N Sbjct: 120 WVAPTLSQKAENIKAAAI-NGKISTGNTGLWLKEKN 154 >gi|308451108|ref|XP_003088547.1| hypothetical protein CRE_17759 [Caenorhabditis remanei] gi|308246904|gb|EFO90856.1| hypothetical protein CRE_17759 [Caenorhabditis remanei] Length = 341 Score = 62.8 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 110/328 (33%), Gaps = 11/328 (3%) Query: 35 EIQNQMGE--LPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISR 92 ++ + G+ + S + R+P + I+P + ++VF L E+ + Sbjct: 5 QLIKRFGQAAMGRVDPSILLSIIGFRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVLN 64 Query: 93 AIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 GIS Q+ + +++ +++ ++ G + LI + Sbjct: 65 GSGISRIQVARLLIPLTVIYLCVQSVLMIWMSPWGIRQYEQLISTQAVRTGFDLVRPREF 124 Query: 153 MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVV 212 + ++ I+ + K + +I K+A I N+ + +V Sbjct: 125 ISSGAYTIYAGSLSEDRKNLKDIFFYQRAEKEGKPDVMILAKEATRIEIANETASVVDLV 184 Query: 213 EYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 E + I + + + ++ + ++ +SF ++ + Sbjct: 185 EGRRYEIYP--GTPKYSQTEFQSYRLRLENNKEAKFESDEVEGLSFGKLLENRNDPVVAS 242 Query: 273 QFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSG 332 + + + +P ++ ++A ++ R + + + ++ ++ I K Sbjct: 243 ELGWRLFVPFSIIVALMLATALCEVSPRQGRYLKLFPALLIFASLIVALMAIRTRISKDE 302 Query: 333 ILLPVAAALI--PVILTISLSILILLQK 358 V+L +++ + +K Sbjct: 303 -----VGVWAYPAVLLFYAVAAALFSRK 325 >gi|114768924|ref|ZP_01446550.1| Predicted permease [alpha proteobacterium HTCC2255] gi|114549841|gb|EAU52722.1| Predicted permease [alpha proteobacterium HTCC2255] Length = 407 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 110/356 (30%), Gaps = 5/356 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY FK + +F ++ + I + + E L+ +P ++ Sbjct: 36 LDRYLFKQLIGPFAFFCFIISGILLLNQALGIIDIVTE-NGQPAYIVFELSFLILPKVLI 94 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 I + ++++ L EL++ +IG S +L PF++ IL+ LV++ + Sbjct: 95 TAISISGFIASVLIINRLYNEEELLVMMSIGRSFIELSKPFLLFGILIASLLFLVVHNLN 154 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 I+ ++ K Q ++ N F + I + Sbjct: 155 PYAHSKFIEAQERIKKEYVTQIIKPDQFISYQNKYTFFFGDKGNNGELSEILIEEQITPD 214 Query: 185 DKKNKIIHRKDADLAIIYN----DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 I N + + + ++ ++ Sbjct: 215 TTLTHIAKNGQVIANKDSNALLLRNGSTQSYNKVSGTFSLLQFDTLVFDLNQLRKDTISS 274 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 +S + + KK+S + + L ++ L + L Sbjct: 275 ESSLSSLNSTMLKKKISALESFDPRLGRAVSLYHDRNAKVLLAMLFPLLGMLGLLLGGFN 334 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 I + I L + KS+ L+ A L P++ T ++++I + Sbjct: 335 RFGYLIRIISCILIMASLDLLRGASKSWVVENPLIWPAQYLSPLLCTFIIALIIWI 390 >gi|325268898|ref|ZP_08135523.1| hypothetical protein HMPREF9141_0732 [Prevotella multiformis DSM 16608] gi|324988870|gb|EGC20828.1| hypothetical protein HMPREF9141_0732 [Prevotella multiformis DSM 16608] Length = 640 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 71/226 (31%), Gaps = 3/226 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L + + + ++ ++ + L + + S+ Sbjct: 1 MFRIRKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGK-GLSVDVLGQFFWYM 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +++ Q +P L+ +++ + NL +SEL R+ GIS+ Q +V S+L+ + Sbjct: 60 SLMMVPQALPLAILLSSLISYGNLGESSELTAIRSAGISLVQSFRGLIVISVLIACGSFY 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + S +K L+ K + + + + Sbjct: 120 FQNNVGPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + + II L K + + ++ + Sbjct: 180 YRMTDSYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQE 225 >gi|46446271|ref|YP_007636.1| hypothetical protein pc0637 [Candidatus Protochlamydia amoebophila UWE25] gi|46399912|emb|CAF23361.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 383 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 120/363 (33%), Gaps = 29/363 (7%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M ILWRY ++LK + + ++ + L+EI N IS + A ++P Sbjct: 1 MIPILWRYSINHFLKIVFACVFAFISILLTMRLDEIANFAA--LGAPISYILLFAFYQIP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ +P L+ +++ L+ T EL RA G ++ LL P ++ + L IF ++ Sbjct: 59 YILPIALPLSCLIASLIFVQRLSNTHELTALRACGFALKDLLAPILLTAAFLTIFNFWIV 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ-------------------ISNPQQD 161 + +AT L + + + M+ + Sbjct: 119 SEVATQTHLQTNILKSELRSINPLLLLNNKHLMRLKGLYFDSLGPSRVGEMATDAVFAIP 178 Query: 162 IFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI 221 + L + +SI + ++ + ++D + + Sbjct: 179 SQHHQRINLFIAKQLKASSSIFTAQGATLLTTTSLNQENTFDDLLIENMKKSTTHVEDFS 238 Query: 222 DKNSTTLNIPIK-----MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYF 276 + + EQ + ++ K K +++ ++ Sbjct: 239 QILQKKVWTVNNDYLKLPLLLIRAQEQKQALRQAKLENKKPVIVKDLKGQFHKSLSEIAK 298 Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 I +++ TL+ + + SR + + ++ I + F + T + G Sbjct: 299 RSSIAFAVISFTLMGTAFGMNISRQRKHKNLLIVIILTTF---YLTTFFLAKGLDQQFYL 355 Query: 337 VAA 339 A Sbjct: 356 SFA 358 >gi|325124204|gb|ADY83727.1| hypothetical protein BDGL_003141 [Acinetobacter calcoaceticus PHEA-2] Length = 350 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 114/340 (33%), Gaps = 6/340 (1%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 + +++ L + + S + R+P + I+P + ++V Sbjct: 1 MVISLLTLIMMGGRLIKYFG-VAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLV 59 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 F L E+ + G+S QL + +++ +F +++ + G + L Sbjct: 60 FGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVFQSVLMLWMTPWGLREFEKLTTTQ 119 Query: 139 KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADL 198 ++ ++ I+ + DK + +I K+A Sbjct: 120 AVRTGFDLVRPREFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEDKPDVMILAKEATR 179 Query: 199 AIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 + ND + +V+ + I + T + + ++ +S Sbjct: 180 VEVANDTANVVDLVQGRRYEIFPGQPKYT--QAEFQSYRLRLENDKDVKFESGDVEALST 237 Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 + + ++ ++ + + P +V +++ ++S R + ++ IF L Sbjct: 238 TKLFSKTNDPVIRSELGWRLFGPFTIVIALMLSVALSEVSPRQGRYYRLIP-AIFIFSSL 296 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ +K+ L A V++ ++ + +K Sbjct: 297 IVLMIAIKTRISKEELDIW--AYPAVLVVYGVAAALFSRK 334 >gi|153827723|ref|ZP_01980390.1| inner membrane protein YjgP [Vibrio cholerae MZO-2] gi|149737800|gb|EDM52705.1| inner membrane protein YjgP [Vibrio cholerae MZO-2] Length = 199 Score = 62.4 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 56/173 (32%), Gaps = 1/173 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + +K+ ++ + + S + +P + Sbjct: 2 IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASD-GEIPTSMILSIVGLNMPAMG 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ F L SE+ + A GI L+ + +++ + Sbjct: 61 LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW 176 A + L++Q+ + + + +FI + +++ Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVF 173 >gi|237752465|ref|ZP_04582945.1| predicted protein [Helicobacter winghamensis ATCC BAA-430] gi|229375954|gb|EEO26045.1| predicted protein [Helicobacter winghamensis ATCC BAA-430] Length = 357 Score = 62.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 100/359 (27%), Gaps = 7/359 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + +RY YLK Y + IDL + + + N +L A Sbjct: 1 MKLFFRYVSFLYLKYFFYLFVSLECFFVAIDLVKFLDDLPSSANL----FILLLAYDFMY 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q I+P ++ IV+ NL ++S+ A+G + ++ P + S + + + + Sbjct: 57 ASQFILPLSLILAQIVLLINLLKSSQFTAFLALGFAKIKIFYPIFLLSFCITLLFIALNA 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQ--KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 ++ +I Q K + A+ ++ Sbjct: 117 TPFAYAKERVDLIIDQGFVGNYKSDLFVKYNQNYIYFKKIYPLLQRAEGVIVYEINPTQN 176 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + I + + + + + + K Sbjct: 177 SLTRIVESKMAQFNGQDWILENVTITTLDDNLELGKNPLKIQKETTYKTLHDFKPKILDN 236 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 E+ S S + + + N + L + M +A + Sbjct: 237 IYEKQGSISILDAFEAFMLLKEQNANTQKVRGALYNLLFFPLFAPLIMICLAV-FIPNSN 295 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R ++ I + + I SG L P + ++P+ S + Sbjct: 296 RYANFSLMTLAMILGVLITWGIFFSFSKLSISGFLQPEFSVIMPIFTLFLASSFCFYKI 354 >gi|83816098|ref|YP_446193.1| hypothetical protein SRU_2087 [Salinibacter ruber DSM 13855] gi|83757492|gb|ABC45605.1| membrane protein, putative [Salinibacter ruber DSM 13855] Length = 473 Score = 62.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 37/118 (31%), Gaps = 1/118 (0%) Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +RS I+ + + + +FY I L + ++ A + L Sbjct: 333 SPAVQRARSAQSAIQNIRRDTEWQTRRIRSYQVEFYKKFSIALACLIFMVVGAPLGLAL- 391 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R I A + + + + + + G P I +L + ++L Sbjct: 392 RRGGLATIGAVALGIFMLYWITLVQGEKLSERGFFPPWLGMWIANLLMSGAGLWLILY 449 Score = 53.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 1/157 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L + +L M L+ + L ++ +S L A + Sbjct: 1 MLRRLHWIVLRRLPGPFFGWLGTLMFLLLMQFLIRWLPEIAGK-GIPVSVIVELIAYNLA 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ +P L+ ++ F L + + ++ GIS Q++ P +V + LL + Sbjct: 60 YMVVLAVPMSVLLAALMAFGELAESQYYTVIKSTGISFGQIVWPALVVAALLMGGMLYFN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISN 157 N + L + + + + Sbjct: 120 NVMLPEANHRARQLWSDIRGKRPGFELRPGIFYEDME 156 >gi|237745416|ref|ZP_04575896.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229376767|gb|EEO26858.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 347 Score = 62.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 107/327 (32%), Gaps = 10/327 (3%) Query: 31 IDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVI 90 + L I Q + + L + I+ V ++V + SE+V+ Sbjct: 1 MMLIRILGQAAK-GRVASDDVMALIGFTSLNYMPIILILTGFVSVLLVVTRSYQDSEMVV 59 Query: 91 SRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDII 150 A G+S+ + L P + ++ + + L+ + + ++++ D + Sbjct: 60 WFASGLSLTRWLRPVMEFALPIVVLVTLLGFFATPWAYRQSAEYRERFEKREDIARISPG 119 Query: 151 PWMQISNPQQDIF-IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLK 209 + + + Q+ F + L + +S + + V L+ Sbjct: 120 KFQESAAAQRVFFVEKMSEDLSKVKNVFINSSRNGKITTVVSQNGTLETNEKGEKFVVLE 179 Query: 210 KVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYR 269 + Y D + + + + +I + + + + Sbjct: 180 DGIRYDETPDQSDFRIMEF------EKYTAYIAPKGEVTISDISTRSMTTLELVTDTTSK 233 Query: 270 AETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG 329 + + I +P M + L+A + R+ + + + + + ++++ Sbjct: 234 KLGELVWRIGLPFMATLLMLLAIPLGFVNPRAGR-SFNLIIAVLLYMTYSNLSSFIQAYV 292 Query: 330 KSGILLPVAAALIPVILTISLSILILL 356 L A P+ L+++L I++L Sbjct: 293 AQQKLAFGLA-WWPLHLSVALVIVLLF 318 >gi|30468062|ref|NP_848949.1| probable permease YjgP/YjgQ family [Cyanidioschyzon merolae strain 10D] gi|30409162|dbj|BAC76111.1| probable permease YjgP/YjgQ family [Cyanidioschyzon merolae strain 10D] Length = 329 Score = 62.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 102/348 (29%), Gaps = 31/348 (8%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMIL-VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 I +Y + + LY L + L L ++ Q+ + S+ + ++ L Sbjct: 3 IFEQYIWSHLWTPFLYALSACLALTFSAGALVDVMRQITQ--GLSLDMACQILCLQLVLS 60 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P + I + NL +L+ R GI + + L P ++ ++G Sbjct: 61 IHLGLPASCVFGGIFAYANL----DLMALRTSGIGVARWLKPSLIFGCMVGWLAWQWNEW 116 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 L Q ++ + ++ ++ + + + Sbjct: 117 ALPLANYSLHKLQDQIQNQITSKALVNQINHKLIYVKEWKPLHMNHCVMWDSEMNQLWM- 175 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 A + K+VV YQ+ + + + + + Sbjct: 176 -------------AKQIDWDGARWIAKQVVHYQWDDQFQLQLQSHVAKMEWPTAWISQQQ 222 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + +K + N R Y P+ + LI +S++ + Sbjct: 223 WQPMWMNVQTLKCYKQVAEFNKHIAIRY----YQKYAFPISCGLLHLIGSSLASVSKK-- 276 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + F Y ++ +S + + A +PV + Sbjct: 277 ----GFILSLIVLFGYYLFGFGCEALAESSQMSALMAGWMPVAGLFFV 320 >gi|307824320|ref|ZP_07654546.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] gi|307734700|gb|EFO05551.1| permease YjgP/YjgQ family protein [Methylobacter tundripaludum SV96] Length = 383 Score = 62.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/341 (10%), Positives = 92/341 (26%), Gaps = 11/341 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L + L+T L ++++ I ++ E S + + + Sbjct: 24 VLDKMVALDLLRTLLAVWSVIVVIIVSRQFIRILDRAVE-GQVSNQTLMTVLGLKTIIAS 82 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P + ++V + R E+ + G + + L + + + + Sbjct: 83 AAFLPAALFMAVLMVLGRMYRDQEMSAVASAGGGAGTVYRSIFLLVFPLSVLSAGLSFYV 142 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + E + +L+ Q K++ D + + + S + +D ++ Sbjct: 143 SPWAEAMMEELMHQDKESADLRGIAAGKFSEYSQGDLVFY---------VEKIDDDKTMH 193 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + A + L + + + Sbjct: 194 EVFVQHRQGDRLAIINAEVGRLRDLPDGRYIVLENGERIQGQPGTVNYVLEQFTEYAVRM 253 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S K+ S + IP+ +V ++ IA ++ R Sbjct: 254 ETKESAANFGKESVASGTLASSGQINDIAELQRRFSIPMGIVLLSFIAVPLAQMSPR-GG 312 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + G F I + +S+ + + Sbjct: 313 VYGNMLVGFLIYFSYGNFIRVSQSWVMNQTIPAWLGVFGVN 353 >gi|149280024|ref|ZP_01886149.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] gi|149229221|gb|EDM34615.1| hypothetical protein PBAL39_24078 [Pedobacter sp. BAL39] Length = 472 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 31/267 (11%), Positives = 76/267 (28%), Gaps = 5/267 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I K +++ M ++ + L + + + + L Sbjct: 1 MKKI-HVLLLKAFIRPFFVTFFIVMFILLMFFLFKYVDDLIGK-GFEWYVILELMYYASA 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ +I+ F L ELV ++ GIS+ + + P +V + I + Sbjct: 59 ANVSMALPLSILLSSIMTFGTLGENYELVAIKSAGISLQKAMMPLLVLITCISISSFFFS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + L+ ++ + ++ + I K + + Sbjct: 119 DYMLPKANLKFGSLLWDIRNKKLSFLIKEGVF---NSSIPNYSIRVDKKGADGVTLHNVM 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 N I A + +D L ++ + + N ++ + Sbjct: 176 IYDHTSNNGIAKIIIAKEGKMASDDKYLLLKLKDGVRYEESSGKNASYNPRQELTRMRFK 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHN 267 +K+ N Sbjct: 236 ETDQKFDISSFNMKRTDEQGFRNNTQM 262 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + + + ++ + + + I A + R + V + + + I T+ Sbjct: 356 KNIIKVQIEYQKKFTLAFSCLLLFFIGAPLGA-IIRKGGLGLPVVMAVVFFLIYHVISTV 414 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + +G LLP + +I+ L + + Sbjct: 415 AEKSALTGTLLPFFGPWLAIIVLSPLGAFLTYK 447 >gi|157826432|ref|YP_001495496.1| putative permeases [Rickettsia bellii OSU 85-389] gi|157801736|gb|ABV78459.1| Putative permeases [Rickettsia bellii OSU 85-389] Length = 360 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 116/355 (32%), Gaps = 5/355 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + LV++ + ++ + + L +P ++ + Sbjct: 6 KYFIKNILPLLIVITFSMTSLVWITQVLKLLYLFDK--GIKVMDFLSLIILVLPTLLFIL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ I ++ NL +L+I + G+ QL P + ++++ + + + + Sbjct: 64 LPIITVITIIYIYNNLKIERQLIILQTSGVGNLQLALPALYVALIVALLAYYISSTVMPL 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + K+N + + +I+ + T + Sbjct: 124 SHINLKSRLSFIKNNYISSMIEEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRNTDNP 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVE---YQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + ++ K + + +S + + + + Sbjct: 184 SVVFANSGILNIYENDPIFELSKGSRQEYDINGNITQLTFDSLMIKLQNDNPLISQRTTH 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + Y I + + N + + + I+ PL + +A +V L++ S + Sbjct: 244 NKEANEYYIEELLEPPVDLNPMKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLKYPYSKK 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + ++ T S L + A + + +S+ + + ++K Sbjct: 304 TTFMPILFAALSVLIATSAHFTLQNFASKNLAFITACYLNIFFILSIGLYLFIRK 358 >gi|315185937|gb|EFU19701.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM 6578] Length = 424 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 52/413 (12%), Positives = 119/413 (28%), Gaps = 62/413 (15%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 L+RY + + + L ++ + + Q+ + +L +P I+ Sbjct: 8 TLYRYVGEEIALSFVISFLFFFVIFLINQFLLLAEQILSKR-APLFDVILLIIYALPSIV 66 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +PF +L ++ L+ +E + +A GIS+ P VV +LL + + + Sbjct: 67 AISVPFASLAAALMSITRLSSDNEFLAFQAGGISLLHAFLPMVVFGLLLSSVSFVANDYF 126 Query: 124 AT----SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + K+ ++ + + + I P + +L E Sbjct: 127 LPLGTLNFAKLYRQILYTTPEIELESYAIKEYQNTILIPGKVNQSHIDDLLIIEETEEGT 186 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + + + + R + + V L V + + T I +K Sbjct: 187 RILQAREGDIVPGRNEKTALALELHDVFLSLVK-REGDYEYSSAETLTYTILVKDINIAL 245 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 + S ++ + M + E + L L TL ++ S+ Sbjct: 246 RNPGPREMSSVDVYRVMKEREQVLEQKRRSHEKERDDLRRSVSSLYLTTLSLSNESIRSR 305 Query: 300 RSNQPR-----------------------------------------IIVAYGI------ 312 R + +A G+ Sbjct: 306 FLGNLRSSLQRLREKERIRIEDRTLQIYTLEFHKKFSIPFSCIPFVLLAIAIGLFNLKGG 365 Query: 313 ---------FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 F + + ++ + G P A +P I+ +++ + L Sbjct: 366 RAAGFGIGIFLSIVYWGMLVAGQMLGLRTSFSPSLAMWVPNIIISLVALTLFL 418 >gi|126736391|ref|ZP_01752133.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] gi|126714212|gb|EBA11081.1| hypothetical protein RCCS2_01329 [Roseobacter sp. CCS2] Length = 369 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 103/354 (29%), Gaps = 7/354 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + +F L +++ ++ + +Q+ S A +P +++ +P Sbjct: 1 MLSQLMVLFGFFSLVLILIYWINRAVVLFDQLI-ADGQSAGVFLEFTALSLPSVMRLALP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + V ++ SEL + +A G S ++L P + I++ + +++ + Sbjct: 60 LAAFAAAVYVTNRMSTESELTVVQATGYSPFRLARPVLYFGIIVALMMSALMHFLVPMSA 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 D + N + +++ N I+ T ++ Sbjct: 120 ARLADRQAEIAQNITARLLTEGQFLEPINGVTFYIRDITPAGELQDIFLSDTRSDAEQVT 179 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + V L +V+ + NI + + + Sbjct: 180 YTATKAFLVRDNDTIQLVMLDGMVQTLRTENQRLFTTTFDDFAYNISDLIRQPRNRGRRD 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFSRSNQ 303 A +E++ R + + ++ + L+ S + + Sbjct: 240 AYLFTWELLNPTPALEAETGRDAARLISLGHDRFSQSILGIVAALLGFSALMVGGYSRFG 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + IF ++ + T +S A + + + +L Sbjct: 300 VWKQIIGAIFLIIVVKAVETTGLRIARSDP-QLWMVAYLQSAVGFVMIWFLLFW 352 >gi|260891451|ref|ZP_05902714.1| hypothetical protein GCWU000323_02662 [Leptotrichia hofstadii F0254] gi|260858834|gb|EEX73334.1| hypothetical protein GCWU000323_02662 [Leptotrichia hofstadii F0254] Length = 222 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 71/217 (32%), Gaps = 9/217 (4%) Query: 153 MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVV 212 + ++N ++ ++ E ++F I N A+ A ++LKKV Sbjct: 6 VFLTNEEKGFGFYIDEVNNEKATAKNFLIINKRGNNPYPIVFLAENAKFDPGIIRLKKVK 65 Query: 213 EYQYGRIPIDKNSTTLNIPIKM------DGFQKFSEQFASRSFYEIIKKMSFS--NKSNI 264 Y + + + S + ++ + + E+ + + N Sbjct: 66 GYAFDKDGNSQVSALYQEQEIPITTFFRENKKEVKKSRKEMNIKELNEFYKQNIKNPEEK 125 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 +A+ + Y ++ P + + +S+ RS + I + F + + Sbjct: 126 ETALKAQVEIYQRLIGPFASTFLCWLGVLLSVGHRRSGR-GISFGISLIVIFGYIGMASY 184 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 K + A +P + + I ++K G Sbjct: 185 AKIMVLKNNVPANIAMWVPNFVLFIMCIYFSIKKYKG 221 >gi|288802960|ref|ZP_06408396.1| putative permease [Prevotella melaninogenica D18] gi|288334477|gb|EFC72916.1| putative permease [Prevotella melaninogenica D18] Length = 640 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/278 (11%), Positives = 80/278 (28%), Gaps = 3/278 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ ++ + L + + S+ ++ Sbjct: 5 KKLDIFIAKQFGMLFMGTFFISLFVLMMQFLWRYVDDLIGK-GLSMDVLGQFFWYMSLMM 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ + NL +SEL +A GIS+ Q +V SI + + N Sbjct: 64 VPQALPLAILLSSLISYGNLGESSELTAIKAAGISLIQSFRGLIVVSIFIAFGSFYFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + K L+ K + + + + + Sbjct: 124 VGPIAHKHIAQLLISMKQKSPELEIPEGIFYDGIPQTNLYVEKKDLKTGHLYNIMVYRMT 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II L + K + + ++ + N + F+ Sbjct: 184 DSYEDQAIILADSGMLQSTADKKHLVLNLWSGEWFENMRSQEMG--NSASVPYRRETFAH 241 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 + F + SN + + + Sbjct: 242 KHIVLDFDGDFNLTDMAGISNDARTKSIQKIQHDKDSL 279 >gi|302345159|ref|YP_003813512.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] gi|302149884|gb|ADK96146.1| permease, YjgP/YjgQ family [Prevotella melaninogenica ATCC 25845] Length = 640 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/278 (11%), Positives = 80/278 (28%), Gaps = 3/278 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ ++ + L + + S+ ++ Sbjct: 5 KKLDIFIAKQFGMLFMGTFFISLFVLMMQFLWRYVDDLIGK-GLSMDVLGQFFWYMSLMM 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ + NL +SEL +A GIS+ Q +V SI + + N Sbjct: 64 VPQALPLAILLSSLISYGNLGESSELTAIKAAGISLIQSFRGLIVVSIFIAFGSFYFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + K L+ K + + + + + Sbjct: 124 VGPIAHKHIAQLLISMKQKSPELEIPEGIFYDGIPQTNLYVEKKDLKTGHLYNIMVYRMT 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II L + K + + ++ + N + F+ Sbjct: 184 DSYEDQAIILADSGMLQSTADKKHLVLNLWSGEWFENMRSQEMG--NSASVPYRRETFAH 241 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 + F + SN + + + Sbjct: 242 KHIVLDFDGDFNLTDMAGISNDARTKSIQKIQHDKDSL 279 >gi|284036898|ref|YP_003386828.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] gi|283816191|gb|ADB38029.1| permease YjgP/YjgQ family protein [Spirosoma linguale DSM 74] Length = 501 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 2/155 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I + + L + + + L ++ + ++ L Sbjct: 1 MKKI-DKLVLGSFWGPFFLTLGVVIFIFLMRLLMFYIDEFVSK-DLDLATFGRLLFYFAL 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L I +P L+ +++ F NL EL ++ GIS+ + + P ++ +I + F+ Sbjct: 59 LTIPTALPLAVLLSSLMTFGNLGEFFELTALKSAGISLTRAMRPLLIVAIGISAFSFWFN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 N +A G L+ K + Sbjct: 119 NSVAPWANLKGYSLLYDIKTAKATLNLKEGIFYND 153 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 1/158 (0%) Query: 200 IIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFS 259 Y + V Q + L +++ Sbjct: 308 RQYYNYQFKSDAVLKQKVLKDGKWADSLLTAQKIPQHELAQIALNQAQNILSYSTSNVTY 367 Query: 260 NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLY 319 + +R + + + + + M LI AS+ + + V I LY Sbjct: 368 LTEKEKNVWRYQLETHHKFTQAISVFVMFLIGASMGAIIKK-GGFGLPVLIAIVFFIFLY 426 Query: 320 TIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + K G+L A + I+ +L++ + Sbjct: 427 VLTIAGDKYAKDGLLWVPIGAWLANIVLFPFGLLLMQR 464 >gi|154491977|ref|ZP_02031603.1| hypothetical protein PARMER_01608 [Parabacteroides merdae ATCC 43184] gi|154088218|gb|EDN87263.1| hypothetical protein PARMER_01608 [Parabacteroides merdae ATCC 43184] Length = 655 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 76/273 (27%), Gaps = 3/273 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L+ + + +L L + +V + L + M I A + Sbjct: 1 MLKIKRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGK-GLGIPVLAEMFMYA 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 ++ +P L+ +++ F NL EL+ ++ G+S+ ++ P ++ ++ I Sbjct: 60 ALFLVPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLVHIMRPLIITISIISIGAFF 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + L+ + + + Sbjct: 120 FQNYAMPVVQVKLYTLLWSMRQKSPELDIPEGVFYSEITGFNVYVKHKDTETGLLRDMMI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + K ++ L + + + + R + ST + Sbjct: 180 YDYSEGFNKVSVMVADSGRLKTSADKMFLVLSLFNGESFRSLDKQPSTAGTKSSVPYQRE 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAE 271 F + F + S N F Sbjct: 240 TFKSRDILIEFDANFSRTDESFMQNQFMGKNMH 272 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + R T+++ + + I A + R + V + Y I I Sbjct: 387 YRVRRHLTEWHKKFTLSFACMVFFFIGAPLGA-IIRKGGLGMPVVISVILFIFYYIIDNI 445 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + + L I + + Sbjct: 446 GFKMARDGVWEAWQGMWLSSAILAPLGIFLTYK 478 >gi|91206136|ref|YP_538491.1| putative permeases [Rickettsia bellii RML369-C] gi|91069680|gb|ABE05402.1| Putative permeases [Rickettsia bellii RML369-C] Length = 360 Score = 62.0 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 124/358 (34%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + LV++ + ++ + + L +P ++ + Sbjct: 6 KYFIKNILPLLIVITFSMTSLVWITQVLKLLYLFDK--GIKVMDFLSLIILVLPTLLFIL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ I ++ NL +L+I + G+ QL P + ++++ + + + + Sbjct: 64 LPIITVITIIYIYNNLKIERQLIILQTSGVGNLQLALPALYVALIVALLAYYISSTVMPL 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFT 180 + K+N + + + + ++ K ++ ++ D Sbjct: 124 SHINLKSRLSFIKNNYISSMIEEKTFNKITKDITVYIDKKSTGNVMKGVIIFDNRNTDNP 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 S+ + ++ + + + + + +S + + + Sbjct: 184 SVVFANSGILNIHENDPIFELSKGSRQEYDI---NGNITQLTFDSLMIKLQNDNPLISQR 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + Y I + + N + + + I+ PL + +A +V L++ Sbjct: 241 TTHNKEANEYYIEELLEPPVDLNPMKKIKLIAEAHQRIIWPLYNFVLPFLALAVFLKYPY 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + + ++ T S L + A + + +S+ + + ++K Sbjct: 301 SKKTTFMPILFAALSVLIATSAHFTLQNFASKNLAFITACYLNIFFILSIGLYLFIRK 358 >gi|332290859|ref|YP_004429468.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] gi|332168945|gb|AEE18200.1| permease YjgP/YjgQ family protein [Krokinobacter diaphorus 4H-3-7-5] Length = 528 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 25/248 (10%), Positives = 71/248 (28%), Gaps = 2/248 (0%) Query: 111 LLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKIL 170 + N +K + ++ + + + + Sbjct: 182 PTLSLKLTDGNYYTEVQKKDYKERKKEPFAKSYFETYTLNIDLSELDAVDLDDKDINNSY 241 Query: 171 PENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI 230 +I +SIT K + R I+ + + I+ T L+ Sbjct: 242 QMMNIVLLDSSITELSKRYVEDRTTFSDKYIHKANLTSLDSLYSGVPAQDIEIKDTLLDN 301 Query: 231 PIKMDGFQKFSEQFASRS-FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 D + ++ + ++ K ++ + E + V+ + + Sbjct: 302 YEVRDRVRILEIAKSNLNNTVADLENRKNKLKVDVKRLSKFEISLHEKYVLGFSCILLFF 361 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 + A + R + + G+ + I K+ ++ + P A+ + + + Sbjct: 362 VGAPLGA-IIRKGGLGLPIVIGVVVFLTFHFIGIFAKNSAENNSISPFVASWLSTFILLP 420 Query: 350 LSILILLQ 357 L I + + Sbjct: 421 LGIYLTYR 428 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 25/247 (10%), Positives = 67/247 (27%), Gaps = 3/247 (1%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M + + + ++ + +P ++ ++P L+ +I+ F N Sbjct: 1 MFIFVLQSVWLYIQELAGR-DLDFDVIIKFLLFAMPSLVTLVLPLSVLLTSIMTFGNFAE 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 E ++ GIS+ + + + I L I + L N I + + +L + Sbjct: 60 NYEFAAMKSTGISLQRAMKSVIYFVIFLAIGSFLFANHIIPASQIEFRNLRRNIGKLKPA 119 Query: 145 QKSDIIPW--MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIY 202 + + + + I +I + +L Sbjct: 120 MLIRSGQFNEITEDFNMRVAKKYGDRDQYLRDIVIHQAEKGRMGNYTVIIASEGELISSI 179 Query: 203 NDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS 262 + K+ + Y K+ + + S + + + Sbjct: 180 DSPTLSLKLTDGNYYTEVQKKDYKERKKEPFAKSYFETYTLNIDLSELDAVDLDDKDINN 239 Query: 263 NIFHNYR 269 + Sbjct: 240 SYQMMNI 246 >gi|313886927|ref|ZP_07820630.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332300780|ref|YP_004442701.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] gi|312923624|gb|EFR34430.1| putative phage tail component, N-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332177843|gb|AEE13533.1| permease YjgP/YjgQ family protein [Porphyromonas asaccharolytica DSM 20707] Length = 678 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 43/174 (24%), Gaps = 1/174 (0%) Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K++++ HR A + +L P +S + Sbjct: 331 WLKQDQLSHRPFATVTARRLSHDELLGAESSHASPPPYTLDSLMDRATDQDKLLGYKQAL 390 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S ++ + + P+ + + A + R Sbjct: 391 EWLESLSSSVQIADTYYDDAASDYRVNAQEMHRKFTFPVACLLFFFVGAPLGA-IVRKGG 449 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + Y I T SG + A + + + L + + Sbjct: 450 VGTPMVLAVLIFIIYYVIDTFGLKMINSGQIPVWAGMWLSSAVILPLGAFLTYK 503 Score = 42.8 bits (98), Expect = 0.083, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 57/153 (37%), Gaps = 1/153 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I++ + + +L L LL +V + L + + + + + Sbjct: 5 PKIMYIFMVRSFLPLLLMTLLICWFVVLMQFLWQHVDDLVGK-GMDVGVLLEVIFYAGLY 63 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L+ +++ F NL EL+ ++ G+ + +++ P V+ + + + ++ Sbjct: 64 VLPTAVPLGVLLASLMTFGNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLD 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ 154 ++ + + + + Sbjct: 124 RGVQKASVRVYQILFSARYARPELEIPKGIFFN 156 >gi|319789793|ref|YP_004151426.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] gi|317114295|gb|ADU96785.1| permease YjgP/YjgQ family protein [Thermovibrio ammonificans HB-1] Length = 359 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 119/353 (33%), Gaps = 23/353 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L RY + + ++ + + I + S + A +P Sbjct: 1 MKVLHRYIAFEITRVAALSSALFLFVILMDRASTIAETVLGK-GVSFLDFLSVLAKGLPA 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +IP ++ ++VF +N +EL +++ GIS+ +L P + ++ + + + Sbjct: 60 FLGIVIPMSFVLSVVIVFIGMNSNNELTAAKSCGISLKELSKPVFLLGLIFSLLSFYSLM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A +++ + S+ + +K+ PE + +F + Sbjct: 120 FLAPKSNVAMKRELEELLRKKITLSITEKRF---SSNFPGVTFYVEKLYPEKGLLVNFMA 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLK------KVVEYQYGRIPIDKNSTTLNIPIKMD 235 K+ + D V L +VV+++ + + + + Sbjct: 177 SLQKKEKLVTAFGRRGFLRTKGDTVFLDIEDGSAQVVDWKKPKEFKFIKFKSYTVELYKF 236 Query: 236 GFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 ++ + ++ ++++K+ A + + + +I S++ Sbjct: 237 TRKERFKAAKYKTLFQLLKERDK----------EARVAVVKRTALAFASLIVGIIGFSIA 286 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 + R + V + + Y + T K + AL+P ++ Sbjct: 287 VSIPR-GSIGVGVLISLLLIVLYYILYTFSKKVALKTGQPLL--ALLPDVVFG 336 >gi|268315816|ref|YP_003289535.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] gi|262333350|gb|ACY47147.1| permease YjgP/YjgQ family protein [Rhodothermus marinus DSM 4252] Length = 481 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 1/164 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L R L + M L+ + L + + + L + + Sbjct: 1 MKRLHRMTLGMLPGPFLGWFGTLMFLLIMQFLIKYLPDLVGK-GLPLGVILELISYNLAY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P TL+ I+ F L ++ + ++ GIS+ QL P ++ ++L + N Sbjct: 60 MVVLAVPMATLIAMIMTFGRLAESNAYQVIKSAGISLPQLTWPLLIVGLVLTGAMMYFNN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 I +L + + + + Sbjct: 120 LILPEANHRARNLWIDIQRKKPGFQLQPGVFYDGIEGYSILVQH 163 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 1/114 (0%) Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +R I+ + S + R + + I + + LI + L R Sbjct: 337 QQTRRLQTEIEDLQRSIQWTERRADRYRVEIHKKFSIAVACLIFVLIGMPLGLSVRRGGL 396 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 F + + + G L P +P ++ L + + + Sbjct: 397 GLAGGLALAIFLF-YWITLVQGEKLADRGYLTPWIGMWLPNLVMGLLGVALFVY 449 >gi|319779266|ref|YP_004130179.1| hypothetical protein TEQUI_1112 [Taylorella equigenitalis MCE9] gi|317109290|gb|ADU92036.1| hypothetical protein TEQUI_1112 [Taylorella equigenitalis MCE9] Length = 372 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/342 (9%), Positives = 101/342 (29%), Gaps = 3/342 (0%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVV 78 + +++V++ L ++A + I+ + I Sbjct: 17 GVVFSTLLIVWLSVLLARLLAQAASGIIGPDLVLGISAFSSITALPIILIVSLFISIITT 76 Query: 79 FFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQW 138 R E+ + G+S+ + P + +I + + ++ + + Q++ Sbjct: 77 VSRNYREQEMYVWFTTGVSLVDWIKPVLRIAIPVSVVIAILTIVTSPWAYLQIEEYRQRY 136 Query: 139 KDNGDKQKSDIIPWMQIS--NPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 D K +++ I I+ + + Sbjct: 137 AQRSDFSKIVQGQFLETDAGARVFFIEPSENNNHEFGKIFAREVTEEWISILNADYGDFK 196 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 ++L Y + ++ + + + R+ K Sbjct: 197 TNFETGERYIELGSGTRYDIRIGTPEFRASKFSSVTMNINQKNSYTEEQIRTRALEKIKA 256 Query: 257 SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGF 316 + +N R+++Q + + +PL + + L+ + R + + G Sbjct: 257 RPFTQLIKDNNSRSDSQILWRLSLPLAALNLALLGIPLGSVNPRMGKSAD-IFMAALVGM 315 Query: 317 MLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + ++ +M+ + + + ++ L +L++ + K Sbjct: 316 LYMNLLNVMRGWVAAEQIGLWTGFVLVNGLFSALAVFLFWYK 357 >gi|224534155|ref|ZP_03674735.1| permease, YjgP/YjgQ family [Borrelia spielmanii A14S] gi|224514580|gb|EEF84894.1| permease, YjgP/YjgQ family [Borrelia spielmanii A14S] Length = 355 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 9/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + + F K + T L L MIL+ + DL E N S + +P Sbjct: 3 IDKLFVKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEK-NISFKDILYIYYLYLPKAFS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + L + NL+ +E++ + G+S+ ++L P ++ S+ + + N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISVFISVILFFFDNYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 LI+ N II K + + + + I Sbjct: 122 IDTVAKRDLLIKNSVGNSGSSDKTIII-----RDLAREIYNIKSYDIDENTFSNLMIIIK 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D K++ R D + A ++K KL V E+ I +N+ + + + + Sbjct: 177 DSKDEFQTRYDINKAKWKDNKWKLYGVREFVKVGRKIKENAYDVLDGTGIIKLEPDYIRT 236 Query: 245 ASRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + K+ + L+ + L++ +V + Sbjct: 237 VMLSSKALSFTKLVNWISFLKSERLNYSDALFDLLNRVFFSFRLMLLSFTVGFIALALKK 296 Query: 304 PRIIVAY--GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I++ I + I I G L A+ I + ++ + Sbjct: 297 NIFILSLLNSIAFAVVYVISIVIFSFLADLGYLNIYMASSFTTIFFLIINFFV 349 >gi|294807984|ref|ZP_06766761.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] gi|294444797|gb|EFG13487.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b] Length = 638 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 77/255 (30%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 11 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 69 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 129 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIY 186 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 ++ + AD + K + G + + + ++ ++F E Sbjct: 187 SMKDGFEKARIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSENVPYRREEFRE 246 Query: 243 QFASRSFYEIIKKMS 257 + F + Sbjct: 247 KHTIIEFNSDFNMVD 261 Score = 56.6 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 360 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 418 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L I + + Sbjct: 419 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 461 >gi|160885006|ref|ZP_02066009.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] gi|156109356|gb|EDO11101.1| hypothetical protein BACOVA_03003 [Bacteroides ovatus ATCC 8483] Length = 632 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 78/255 (30%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 ++ + AD + K + G + + + ++ ++F E Sbjct: 181 SMKDGFEKARIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSENVPYRREEFRE 240 Query: 243 QFASRSFYEIIKKMS 257 + + F + Sbjct: 241 KHSIIEFNSDFNMVD 255 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 354 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 412 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + + Sbjct: 413 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGVFLTYK 455 >gi|237712765|ref|ZP_04543246.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409745|ref|ZP_06086283.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229447177|gb|EEO52968.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352398|gb|EEZ01500.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|295084616|emb|CBK66139.1| Predicted permeases [Bacteroides xylanisolvens XB1A] Length = 632 Score = 61.6 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 77/255 (30%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 ++ + AD + K + G + + + ++ ++F E Sbjct: 181 SMKDGFEKARIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSENVPYRREEFRE 240 Query: 243 QFASRSFYEIIKKMS 257 + F + Sbjct: 241 KHTIIEFNSDFNMVD 255 Score = 56.6 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 354 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 412 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L I + + Sbjct: 413 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 455 >gi|262382624|ref|ZP_06075761.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295502|gb|EEY83433.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 658 Score = 61.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 78/265 (29%), Gaps = 2/265 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L+ + + +L L + +V + L + M I A + + Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGK-GLGIPVLAEMFMYAALFL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL EL+ ++ G+S+ ++ P +V + + + N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + L+ + + + + + Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 183 TIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++I L + + L + + + +TT + FS Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFLVLSLFNGESFENVGKSQANTTQARTAVPYRRESFS 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFH 266 + F + S N + Sbjct: 244 SKDILIEFDANFNRTDESFMQNQYM 268 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + R T+++ + + I A + R + V + Y I + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIGAPLGA-IIRKGGLGVPVVISVILFIFYYIIDNM 439 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + ++ + I + + Sbjct: 440 GFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|301308106|ref|ZP_07214060.1| putative permease [Bacteroides sp. 20_3] gi|300833576|gb|EFK64192.1| putative permease [Bacteroides sp. 20_3] Length = 651 Score = 61.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 78/265 (29%), Gaps = 2/265 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L+ + + +L L + +V + L + M I A + + Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGK-GLGIPVLAEMFMYAALFL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL EL+ ++ G+S+ ++ P +V + + + N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + L+ + + + + + Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 183 TIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++I L + + L + + + +TT + FS Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFLVLSLFNGESFENVGKSQANTTQARTAVPYRRESFS 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFH 266 + F + S N + Sbjct: 244 SKDILIEFDANFNRTDESFMQNQYM 268 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + R T+++ + + I A + R + V + Y I + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIGAPLGA-IIRKGGLGVPVVISVILFIFYYIIDNM 439 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + ++ + I + + Sbjct: 440 GFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|297537470|ref|YP_003673239.1| permease [Methylotenera sp. 301] gi|297256817|gb|ADI28662.1| permease YjgP/YjgQ family protein [Methylotenera sp. 301] Length = 372 Score = 61.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/353 (9%), Positives = 107/353 (30%), Gaps = 10/353 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R + T L + +V Q+ + + + + Sbjct: 5 RSLLHELIATASGTFLILIGIVIAQR-AGYLVQLAAKGVLPNDAITTILGFNIIRFMPLL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + ++ R SE+VI + G+SI + P +V + + + + + Sbjct: 64 LSLSLFLAILLTLSRWYRDSEMVIWFSAGLSITSWIRPILVFATPIVVIIAFLSLFVTPW 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFTSITID 185 D Q + D + + ++ + ++ + Sbjct: 124 ATNKVEDFRVQLESRDDLAAISPGVFKESAHADRVFFIESFDELGNIVKNIFVQSIQHQK 183 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + + + ++ + ++ Y+ R + ++T + + Sbjct: 184 LGIIVAAQGSRLVEKNGDNFLLMEHGHRYEGARGTSEYSTTEFEKYAIRVEASEAKREPP 243 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 S + + +NI + + +P+ + + L+A +S R+ + Sbjct: 244 STQSISSRDLIMNKSNNNIAEL-------QWRLAMPVSALILALLAIPLSALDPRAGRSA 296 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 A I + ++ I++++ G + + ++ +L + ++ Sbjct: 297 -NFALAIVIYIIYNNLLNIIQAWIAQGKVSGIIGLWPIHLVFGTLVFYMFYRR 348 >gi|293369978|ref|ZP_06616545.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] gi|292634896|gb|EFF53418.1| putative membrane protein [Bacteroides ovatus SD CMC 3f] Length = 638 Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 77/255 (30%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 11 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 69 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNV 129 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIY 186 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 ++ + AD + K + G + + + ++ ++F E Sbjct: 187 SMKDGFEKARIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSENVPYRREEFRE 246 Query: 243 QFASRSFYEIIKKMS 257 + F + Sbjct: 247 KHTIIEFNSDFNMVD 261 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 360 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 418 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L I + + Sbjct: 419 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 461 >gi|298483137|ref|ZP_07001317.1| permease [Bacteroides sp. D22] gi|298270654|gb|EFI12235.1| permease [Bacteroides sp. D22] Length = 632 Score = 61.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 77/255 (30%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFIVKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P L + N Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLIGVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 ++ + AD + K + G + + + ++ ++F E Sbjct: 181 SMKDGFEKARIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSENVPYRREEFRE 240 Query: 243 QFASRSFYEIIKKMS 257 + F + Sbjct: 241 KHTIIEFNSDFNMVD 255 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 354 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 412 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L I + + Sbjct: 413 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 455 >gi|28198043|ref|NP_778357.1| hypothetical protein PD0107 [Xylella fastidiosa Temecula1] gi|182680670|ref|YP_001828830.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|28056103|gb|AAO28006.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182630780|gb|ACB91556.1| permease YjgP/YjgQ family protein [Xylella fastidiosa M23] gi|307579131|gb|ADN63100.1| permease YjgP/YjgQ family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 361 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 108/341 (31%), Gaps = 16/341 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ + L+ M++ L +I + + ++ R Sbjct: 1 MPK-LDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIAD-GHFPAKLLLSQLGLRFI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P ++ ++ L R SE+ + +IG+ ++L + + + + + Sbjct: 59 SYLPLLLPLALMLGLLMSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + DL++Q + + + + + + + + Sbjct: 119 LWLAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQS 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + + ++L+ N L + Sbjct: 179 QKDDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPEL 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S + A+ Q + + PL+ +A L+ +S R Sbjct: 239 SVVYDSNHPDILPTF-----NLIGDPRREAQAQLHARLAPPLLALAFALLVLPLSRSAPR 293 Query: 301 SNQPRIIVAYGIFSGFMLYT----IITIMKSFGKSGILLPV 337 + + F++Y ++ + + +G + PV Sbjct: 294 QQRYG-----AVMMCFLVYMVGTNLMIVGTQWIANGKISPV 329 >gi|255533443|ref|YP_003093815.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] gi|255346427|gb|ACU05753.1| permease YjgP/YjgQ family protein [Pedobacter heparinus DSM 2366] Length = 480 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 75/267 (28%), Gaps = 5/267 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I K +++ M ++ ++ L + + + + L Sbjct: 1 MKKI-HLLLVKAFIRPFFVTFFIVMFILLMLFLFKYVDDLIGK-GFEWYVILELMYYASA 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P L+ +I+ F L ELV ++ G+S+ + + P +V I L I + L Sbjct: 59 ANVSMALPLSILLSSIMTFGTLGENYELVAIKSAGVSLQKAMMPLLVLIIFLAISSFLFS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + L+ ++ + +N I K + + Sbjct: 119 EYMLPKANLKFGSLLWDIRNKKLSFLIKEGVF---NNSIPGYSIRVDKKGSDGISLHNVM 175 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 N I A + + L + + S++ N ++ + Sbjct: 176 IYDHTSNNGIAKIIIAKSGKMSKNDDYLLLTLHDGVRYEESNGKSSSYNPRQELTRMRFK 235 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHN 267 + + Sbjct: 236 ETDQKFDISSFKMNRTDEEGFRGNTQM 262 Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + + E +F + + + I A + R + V I + I T+ Sbjct: 356 RNIIKVEIEFQKKFTLAASCLLLFFIGAPLGA-IIRKGGLGLPVVMAIVFFLFYHIIATV 414 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G L P + I+ L + + Sbjct: 415 SEKSATQGSLTPFFGMWLAFIILSPLGAFLTYK 447 >gi|282879343|ref|ZP_06288087.1| putative membrane protein [Prevotella buccalis ATCC 35310] gi|281298540|gb|EFA90965.1| putative membrane protein [Prevotella buccalis ATCC 35310] Length = 635 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 67/226 (29%), Gaps = 3/226 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L + K + ++ + L + + S+ A Sbjct: 1 MFRIKKLDLFIAKQFGLLFAGTFFICQFVLMMQFLWRYVDVLIGK-GLSMEVMAQFFWYM 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 ++ Q +P L+ +++ F NL +SEL ++ GIS + +V S+++ + Sbjct: 60 GLFLVPQALPLAILLASLITFGNLGESSELTAIKSAGISTMRTFRSLIVISVVVCFCSFY 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + S L+ + + + + + Sbjct: 120 FQNYVGPSANMKMAQLMISMSQKNPELEIPEGIFYDGIPNSNLYVQKKDMDTGKLYGIMI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + + II L + K L + ++ + Sbjct: 180 YRMTGSYEDQAIILADSGMLQTTADKKHLLLTLWSGEWFENMQSQE 225 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 23/95 (24%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + + L + I A + R I V + + Y + Sbjct: 363 GDRLLREHYIEMINKFTLALTCIIFFFIGAPLGA-IIRKGGLGIPVIVSVLVFIVYYLLD 421 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + + I L+ + + Sbjct: 422 NTGYRMARGDMWTVEFGKGLAPAVLIPLASFVTYK 456 >gi|149373007|ref|ZP_01891963.1| hypothetical protein SCB49_11577 [unidentified eubacterium SCB49] gi|149354367|gb|EDM42934.1| hypothetical protein SCB49_11577 [unidentified eubacterium SCB49] Length = 515 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 72/241 (29%), Gaps = 11/241 (4%) Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 +LI++ ++ + + + + AK + EN+I + Sbjct: 190 KNGYDYQELIEKDYKKQHREPYVKTYFEEYTINIDLTALNAKDVDQENNISNQNMYNIGE 249 Query: 186 KKNKIIHRKDAD---------LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 +I DA +K K + + +P + Sbjct: 250 LATEIDSLSDAYSKNLEQFAENMYHRTGSIKFKDEKTENIPVSDTVTSILDIYLPHERAD 309 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + + + + K +K+ + + E + IV+ + + I A + Sbjct: 310 IIGMAINNVNGTI-QAAKAKKEDSKNRVRKLNKYEIALHEKIVLGFACIILFFIGAPLGA 368 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 R + + + + I K+ + G + P I ++ + LSI + Sbjct: 369 -IIRKGGMGLPMVVAVVLFLTYHFIGIFAKNSAEDGSIHPFLGTWISTLIMLPLSIWLTY 427 Query: 357 Q 357 + Sbjct: 428 R 428 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 1/131 (0%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M + + + +++ + IS P I+ ++P LV +++VF Sbjct: 1 MFIFILQGIWLYISELAGK-DLDISIVLKFLWFYSPRIVTLVLPLSILVTSLMVFGGFAE 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 E ++ GIS+ + + V +LLGI N + E +L + + Sbjct: 60 RYEFAAMKSTGISLQRAMRSLSVFILLLGITAFFFSNNVIPYSEYKWQNLRRNIQQFKPS 119 Query: 145 QKSDIIPWMQI 155 + QI Sbjct: 120 MVIAAGQFNQI 130 >gi|294084200|ref|YP_003550958.1| hypothetical protein SAR116_0631 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663773|gb|ADE38874.1| hypothetical membrane spanning protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 364 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 113/354 (31%), Gaps = 7/354 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y F + T + + ++++ ++ + I +++ T +PL + + Sbjct: 6 YIFNQLFRATCVISMVLIGIMWLFQTIKLLELVVNK-GAPIFDFLLMSITVIPLWLTIAL 64 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P V VF + EL + +A+G+S QL + +LL + + Sbjct: 65 PIAGFVAVNWVFHRILADRELTVMQAVGLSPAQLAKAPIALGMLLTSVLYFNSVYLLPTS 124 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 I DL ++ + P +FIG+++ + TIDK Sbjct: 125 FGIYKDLQFNLRNGIPVILLQDGVF-TEVVPGLTMFIGSREENDVVSDVFIQDTRTIDKT 183 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPI---KMDGFQKFSEQF 244 + + Y+ + L + + + Sbjct: 184 IILTAENGKFVGKDYHPTLILGNGQRLEVNSDGESGALLLFETHSLSLVTNEKKPSERIA 243 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL-EFSRSNQ 303 + I + + ++ + ++ I P++ +A+ ++ +++L R + Sbjct: 244 NDMNEDSISNLLDAKKSPYADYAFQRIAEGHYRIASPVLALALIMMVIAITLHGQLRRDL 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I L + + +S+ + + I L I + + L + Sbjct: 304 WLRRSLINISCCLGLIVALILARSWTIT-MPHLWILIHIVTTLPILICGIALAR 356 >gi|153951328|ref|YP_001398257.1| hypothetical protein JJD26997_1188 [Campylobacter jejuni subsp. doylei 269.97] gi|152938774|gb|ABS43515.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 341 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 106/347 (30%), Gaps = 21/347 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY +L T L +V ++ ++ S L +P I+ Sbjct: 6 RYVLNQFLSTNLSIFFVLFAIVSMVFFI-QLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + + F L++ +E ++ +G S L F+ + L+ F ++V + Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMTPI 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + +K K + Q EN I DK Sbjct: 125 VFELQDNFV-NYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKHENIIMYRPKHKAGDK 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + II ++ + L + Y + + + Sbjct: 184 EQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGE-----------FDTLVVNTQ 232 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + K + +++ N + +F I I L +A TL A L R + + Sbjct: 233 FNTDNLQTKKFYEYWNDLNENPQRAREFVIYITIALFPLASTLFALCFGLVTYRYEKGYV 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + P+ A L L++ +S Sbjct: 293 YLGMFGVIAIYFGLLSSFSQ--------PPILACLGIFSLSLFVSAY 331 >gi|126640321|ref|YP_001083305.1| hypothetical protein A1S_0228 [Acinetobacter baumannii ATCC 17978] gi|332874943|ref|ZP_08442794.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] gi|332736886|gb|EGJ67862.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6014059] Length = 341 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 107/319 (33%), Gaps = 5/319 (1%) Query: 40 MGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW 99 + S + R+P + I+P + ++VF L E+ + G+S Sbjct: 12 VAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRH 71 Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ 159 QL + +++ + +++ + G + L ++ Sbjct: 72 QLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYT 131 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI 219 ++ I+ + K + +I K+A + ND + +V+ + I Sbjct: 132 IYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRVEVANDTANVVDLVQGRRYEI 191 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 + T + + ++ +S S + ++ ++ + + Sbjct: 192 FPGQPKYT--QAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPVVRSELGWRLF 249 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 P ++ +++ ++S R + ++ IF L ++ +K+ G L Sbjct: 250 GPFTIIIALMLSVALSEVSPRQGRYYRLIP-SIFIFASLIVLMIAIKTRISKGELDIW-- 306 Query: 340 ALIPVILTISLSILILLQK 358 A +L +++ + +K Sbjct: 307 AYPVALLVYAIAAALFSRK 325 >gi|217977121|ref|YP_002361268.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] gi|217502497|gb|ACK49906.1| permease YjgP/YjgQ family protein [Methylocella silvestris BL2] Length = 380 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/366 (10%), Positives = 109/366 (29%), Gaps = 12/366 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L Y K T L I + + L + +P Sbjct: 1 MPRLLTLYLAKRIGVTALLIEAMLCIPLVMTSLFQTLPAAAIRGGLLWPALLG----TLP 56 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ +P V + F ++ + + +I +S+W L P ++ + + Sbjct: 57 TVLYLALPLSVGVAVALEFSRMSSDGMIAVLYSIRLSVWSLCLPALIVAAAAVGAGYALS 116 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + IA S D+I +++ + + + + + +F + + Sbjct: 117 SYIAPSYVGQMHDVIHVIRNSLNHRMLEPAHFYTFDKGARTMFFQRWRSADVAAGMFIYQ 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ------YGRIPIDKNSTTLNIPIKM 234 + +II+ ++A+ V + Q + L I ++ Sbjct: 177 YSAEKNEEQIINAEEAEFRRNEQGVVIVLNHGSIQTLPSGAQAMRNANFEQYALPIDMQG 236 Query: 235 DGFQKFSEQFASRSFYEIIKKMSF-SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 G + + + + ++ IP++ + L+A Sbjct: 237 AGALPKRDWRGVFELPLGDFFAAIPPERWDPRGYAEWMSEAAKRCFIPILALTHALLAVG 296 Query: 294 VSLEFSRSNQPRIIVAYGIFSGF-MLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + L + + +++ I + + + + + L++ Sbjct: 297 LVLTVAAATGRGSAATTSTVLAIPLIHVAILVGSESIVRENPHLIWLIALAIAAELGLAL 356 Query: 353 LILLQK 358 ++ ++ Sbjct: 357 FLIARR 362 >gi|218459006|ref|ZP_03499097.1| putative permease protein [Rhizobium etli Kim 5] Length = 250 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G L+ P ++ + ++ +F+ V N Sbjct: 70 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDN 129 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 + + + +I + + + + Sbjct: 130 IVEPRAKTVARQMIAETYADLLSSVIEEKTF 160 >gi|32491207|ref|NP_871461.1| hypothetical protein WGLp458 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166414|dbj|BAC24604.1| yjgP [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 357 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 124/351 (35%), Gaps = 5/351 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K LK+ + L ++ F L I + M E L +P II Sbjct: 2 IILKYLIKKILKSQFHILCILFLIFFCQKLVRILSSMSEEL-IPKKIIFFLLILYIPEII 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + I+P + +V L+ ++E++ + GI + + ++L+ F+ + + I Sbjct: 61 KLILPLSLFISIALVMQKLHNSNEIISIKTCGIGNECFIKVILFLNLLVMSFSFVNVMWI 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + +I N DK K + + I + +F+ K +I+ + Sbjct: 121 SPLALNYKHKIISYNLSNIDKLKLNEKQFKFIKDKNIILFVDNIKDKNLKNIFIVKFILK 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + ++ K K + Y K++ + + F+ Sbjct: 181 NKEYIPVVFVSKHGSLYKDLLKNKNVINLNYGEYYEIDFKSNYFFIASFERYQIELFNTF 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S I + ++ + I I ++ M++I+ +++++ S Q Sbjct: 241 SRLKEPSSEYVYFKNLFNSCI---EEYKLEYNWRITIVFSVLIMSIISFALNIKKLGSGQ 297 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + GIF + + T + S L + I + I SI + Sbjct: 298 -FFNLFLGIFFYLIFFISQTFIYSNHSLFKLHSIFFMWIINFIYIFFSIAL 347 >gi|283957186|ref|ZP_06374650.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] gi|283791362|gb|EFC30167.1| hypothetical protein C1336_000800059 [Campylobacter jejuni subsp. jejuni 1336] Length = 341 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 106/347 (30%), Gaps = 21/347 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY +L T L +V ++ ++ S L +P I+ Sbjct: 6 RYVLNQFLSTNLSIFFVLFAIVSMVFFI-QLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + + F L++ +E ++ +G S L F+ + L+ F ++V + Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + +K K + Q EN I T DK Sbjct: 125 VFELQDNFV-NYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKTDDK 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + II ++ + L + Y + + + Sbjct: 184 EQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGE-----------FDTLVVNTQ 232 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + K + +++ N + +F I L +A TL A L R + + Sbjct: 233 FNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLFALCFGLVTYRYEKGYV 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + P+ A L L++ +S Sbjct: 293 YLGMFGVIAIYFGLLSSFSQ--------PPILACLGIFSLSLFVSAY 331 >gi|325917726|ref|ZP_08179914.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536055|gb|EGD07863.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 360 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/363 (9%), Positives = 103/363 (28%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + I L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVIIIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAETMLEDANRSVLMAGLESGKFTPLSGGGVVYLTTISADGKNLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + ++L+ + + + Sbjct: 179 QKDDRLDVVTAERGAMFFEGKTDRYLRLEDGYRIEGPAAGDTLDYRLMKFASNDVALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + + +S + Q + + PL+ +A L+ +S Sbjct: 239 TRTHDANDPEVMWTTQLLSDERPAA-------RAQLHERLAPPLLALAFALLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWA--YA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|260642684|ref|ZP_05416897.2| putative permease [Bacteroides finegoldii DSM 17565] gi|260621031|gb|EEX43902.1| putative permease [Bacteroides finegoldii DSM 17565] Length = 632 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 76/255 (29%), Gaps = 4/255 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + + + + L +++ +S A + Sbjct: 5 KKLDIFIVKSFFMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P V L + N Sbjct: 64 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + LI K + + D + K + + D Sbjct: 124 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIP---DYNLKIAKKDRKTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + H AD + K + G + + + ++ + F E Sbjct: 181 NLKDGFENAHIIYADSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSQNVPYRRESFRE 240 Query: 243 QFASRSFYEIIKKMS 257 + F + Sbjct: 241 KHTIIEFNSDFNMVD 255 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 S++ +SN + + +T+++ I I L + I A + R + V + Sbjct: 354 FKSYTMESNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 412 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L I + + Sbjct: 413 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 455 >gi|57237667|ref|YP_178915.1| hypothetical protein CJE0913 [Campylobacter jejuni RM1221] gi|86152068|ref|ZP_01070280.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|86153259|ref|ZP_01071463.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613133|ref|YP_001000511.1| hypothetical protein CJJ81176_0843 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415093|ref|YP_001482349.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|167005447|ref|ZP_02271205.1| hypothetical protein Cjejjejuni_04350 [Campylobacter jejuni subsp. jejuni 81-176] gi|315124344|ref|YP_004066348.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166471|gb|AAW35250.1| membrane protein, putative [Campylobacter jejuni RM1221] gi|85840853|gb|EAQ58103.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|85842985|gb|EAQ60196.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249473|gb|EAQ72433.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|157386057|gb|ABV52372.1| hypothetical protein C8J_0773 [Campylobacter jejuni subsp. jejuni 81116] gi|307747735|gb|ADN91005.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] gi|315018066|gb|ADT66159.1| hypothetical protein ICDCCJ07001_795 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058276|gb|ADT72605.1| Predicted permease YjgP/YjgQ family [Campylobacter jejuni subsp. jejuni S3] gi|315928910|gb|EFV08167.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] gi|315931165|gb|EFV10138.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 341 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 105/347 (30%), Gaps = 21/347 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY +L T L +V ++ ++ S L +P I+ Sbjct: 6 RYVLNQFLSTNLSIFFVLFAIVSMVFFI-QLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + + F L++ +E ++ +G S L F+ + L+ F ++V + Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + +K K + Q EN I DK Sbjct: 125 VFELQDNFV-NYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKADDK 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + II ++ + L + Y + + + Sbjct: 184 EQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGE-----------FDTLVVNTQ 232 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + K + +++ N + +F I L +A TL A L R + + Sbjct: 233 FNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLFALCFGLVTYRYEKGYV 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + P+ A L L++ +S Sbjct: 293 YLGMFGVIAIYFGLLSSFSQ--------PPILACLGIFSLSLFVSAY 331 >gi|332708721|ref|ZP_08428693.1| putative permease [Lyngbya majuscula 3L] gi|332352575|gb|EGJ32143.1| putative permease [Lyngbya majuscula 3L] Length = 116 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 2/114 (1%) Query: 247 RSFYEIIKKMSFSNKSNIFHNYRA-ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + + I+ + + R + + I P + + L+ AS+S+ R ++ Sbjct: 1 MNILQAIEMIQLLKVAGDRKKLRMLQVRMQQKIAFPFICIIFGLVGASISIRPKRISK-G 59 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + F Y + ++ FG +GIL P+ AA +P + +L + E Sbjct: 60 TSFGVCLIVIFGYYLLSFVIGGFGIAGILSPIVAAWLPNLFGFGAGGWLLWRLE 113 >gi|150010074|ref|YP_001304817.1| hypothetical protein BDI_3493 [Parabacteroides distasonis ATCC 8503] gi|256838884|ref|ZP_05544394.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149938498|gb|ABR45195.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256739803|gb|EEU53127.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 651 Score = 60.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 78/265 (29%), Gaps = 2/265 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L+ + + +L L + +V + L + M I A + + Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGK-GLGIPVLAEMFMYAALFL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL EL+ ++ G+S+ ++ P +V + + + N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + L+ + + + + + Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 183 TIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++I L + + L + + + +TT + FS Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFLVLSLFNGESFENVGKSQANTTQARTAVPYRRESFS 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFH 266 + F + S N + Sbjct: 244 SKDILIEFDANFNRTDESFMQNQYM 268 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + R T+++ + + I A + R + V + Y I + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIGAPLGA-IIRKGGLGVPVVISVILFIFYYIIDNM 439 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + ++ + I + + Sbjct: 440 GFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|182677588|ref|YP_001831734.1| permease-like protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633471|gb|ACB94245.1| permease-like protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 386 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 36/370 (9%), Positives = 114/370 (30%), Gaps = 20/370 (5%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L Y + + L + + + L +P Sbjct: 1 MPRLLTLYLTRRIALSVLMIEASLCLPLVMTSLFSALPPAAVRGGLIWPALLG----TLP 56 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ +P + + F+ + + + ++ +S+W + P +V +++ F V Sbjct: 57 TVLYIALPMAVGIAIALEFYRMASEGMIAVLYSLRLSVWSICLPGIVIAMVCVFFGYFVA 116 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A + D++ +++ + + + + N + ++ + Sbjct: 117 SFVAPNYVGQMHDVVHVIRNSLNHRMLEPAHFYTFDNGSKTLYFQRWRSSDVVSGMFIHQ 176 Query: 181 SITIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGR-----IPIDKNSTTLNIPIKM 234 K+ +II A+ N + L + + I ++ Sbjct: 177 FSDEKKEEEIITASIAEFRRNENGVMLVLSDGSIESRPEGATAIHTAHFDEYVIPIDMQG 236 Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNY-RAETQFYFLIVIPLMLVAMTLIAAS 293 G + +++ + ++ +P + ++ T++A Sbjct: 237 TGGMPKRNWRGVFEVPALEFFRERPQQADDPRRFSEWTSEATKRFAVPFLALSHTILAMG 296 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL--LPVAAALIPVILT---I 348 + L + + + F++ + I+ G ++ P + + + Sbjct: 297 LVLTLANATGRSTKAG---LTAFIVVPLAHILILIGAETLVRQDPRL-VWLVGLAIAAEL 352 Query: 349 SLSILILLQK 358 + +L +K Sbjct: 353 GVGCYLLYRK 362 >gi|260592583|ref|ZP_05858041.1| putative permease [Prevotella veroralis F0319] gi|260535353|gb|EEX17970.1| putative permease [Prevotella veroralis F0319] Length = 644 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 70/226 (30%), Gaps = 3/226 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L + K + ++ ++ + L + + S+ Sbjct: 1 MFRIKKLDIFIAKQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGK-GLSMEVLGQFFWYM 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +++ Q +P L+ +++ + NL +SEL ++ GIS+ Q +V S+++ + Sbjct: 60 SLMMVPQALPLAILLSSLIAYGNLGESSELTAIKSAGISLIQSFRGLIVISVIIAGASFY 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I +K L+ + + + + + Sbjct: 120 FQNNIGPMAQKNMAQLLISMRHKSPELEIPEGVFYDGIPQTNLYVERKDMKSGHLYNIMV 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + + II L K + + ++ + Sbjct: 180 YRMTDSYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQE 225 Score = 41.6 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 27/95 (28%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + E +F I L+ + I A + R I + + + Y + Sbjct: 363 GDKMIRQHEIEFINKFTISLICIVFFFIGAPLGA-IIRKGGLGIPIIVSVLVFIVYYILD 421 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G + + + + ++ + Sbjct: 422 NTGYRMSRQGDWAIWFGRGLSMAVLVPMAAFFTYK 456 >gi|298374434|ref|ZP_06984392.1| permease [Bacteroides sp. 3_1_19] gi|298268802|gb|EFI10457.1| permease [Bacteroides sp. 3_1_19] Length = 651 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 78/265 (29%), Gaps = 2/265 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L+ + + +L L + +V + L + M I A + + Sbjct: 5 KRLYTFMLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGK-GLGIPVLAEMFMYAALFL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL EL+ ++ G+S+ ++ P +V + + + N Sbjct: 64 VPMALPLAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + L+ + + + + + Sbjct: 124 VMPVVQVKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYS 183 Query: 183 TIDKKNKIIHRKDADLAIIYND-KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++I L + + L + + + +TT + FS Sbjct: 184 EGFNNARVIVADSGRLKTSADKLFLVLSLFNGESFENVGKSQANTTQARTAVPYRRESFS 243 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFH 266 + F + S N + Sbjct: 244 SKDILIEFDANFNRTDESFMQNQYM 268 Score = 53.5 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + R T+++ + + I A + R + V + Y I + Sbjct: 381 YKVRRHLTEWHKKFTVSFACIMFFFIGAPLGA-IIRKGGLGVPVVISVILFIFYYIIDNM 439 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + ++ + I + + Sbjct: 440 GFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 472 >gi|307718798|ref|YP_003874330.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM 6192] gi|306532523|gb|ADN02057.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM 6192] Length = 424 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 1/89 (1%) Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 +F+ IP + L+A ++ L + GIF + + ++ + Sbjct: 331 QIYTLEFHKKFSIPFSCIPFVLLAIAIGLFNLK-GGRAAGFGIGIFLSILYWGMLVAGQM 389 Query: 328 FGKSGILLPVAAALIPVILTISLSILILL 356 G P A +P IL +++ + L Sbjct: 390 LGLRTSFSPSLAMWLPNILITLVALTLFL 418 >gi|57242053|ref|ZP_00369993.1| probable integral membrane protein Cj0313 [Campylobacter upsaliensis RM3195] gi|57017245|gb|EAL54026.1| probable integral membrane protein Cj0313 [Campylobacter upsaliensis RM3195] Length = 350 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 37/353 (10%), Positives = 97/353 (27%), Gaps = 8/353 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I + + YLK + +DL + S + + Sbjct: 1 MSIFFHFISFIYLKNFFILFFALVGFYCGVDLLLNFKDLP----ASANLILLYVLFVGFS 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + ++ F + R +E V A+G+S +++ + ++L + + Sbjct: 57 AVTYILPISLIFALVLSFLTMIRNNEFVSLYALGLSKNRVIIYPFLWALLFCFIYIGLNF 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + NG K +++ + + + + E I+ Sbjct: 117 TSFAY----ANEYKRSILKNGVLNKKSSDIFLKFNEEFVYVKSLDEGLAKELKIFSLKDG 172 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + +N L S Sbjct: 173 NLSHLIQAKRALFNENSWLLEEGNITYIPKEFVLGENGYKSENFANLETLEGFKPKLAKS 232 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S + + Y LI P + LI +R Sbjct: 233 VASGKEYSIYDAYQSLILFDSQGLNTRNVKIALYKLIFAPFFAPFLMLIMYYYFPVIARF 292 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + +++ + + ++G++ ++P +L ++ I Sbjct: 293 FNLAFVAFVAFVVTLVVWGGLFVFLRLSENGVISGEFGIILPNLLLAFFALFI 345 >gi|292572537|gb|ADE30452.1| Putative permease [Rickettsia prowazekii Rp22] Length = 377 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 122/355 (34%), Gaps = 5/355 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 23 KYFIKNILPLLIIVTFSVTSIVWITQILKLLYLFDK--GIKVIDFFNLVVLVLPTLLFIL 80 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ + ++ NL +L+I + G++ QL P + ++ + + + + I Sbjct: 81 LPIITVIAVLYIYNNLKVERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISSTILPL 140 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + K+N + + +I+ N I + Sbjct: 141 SHINLKSRLNFIKNNYISSMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRNADNP 200 Query: 187 KNKIIHR---KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 I+ L++ + + +S + + + ++ Sbjct: 201 SVVFAGSGTLNIYGNNPIFELNKGLRQEYDANGNLTQLTFDSLMIKLQNNSSLTSQRTQN 260 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + Y I + ++ S+ I + + + I+ PL + +A +V L + S + Sbjct: 261 NKEANEYYISELLTPSHDLVITKKIKLIAEAHQRIIWPLYNFVLPCLALAVFLRYPYSKK 320 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + T I + S L + A +++ +++ + +L+ K Sbjct: 321 TTFMPVLFSALTVLFVTAIHFILQNFASKNLDFIFACYFNLLVALTIGLYLLVHK 375 >gi|327314112|ref|YP_004329549.1| permease [Prevotella denticola F0289] gi|326944181|gb|AEA20066.1| permease, YjgP/YjgQ family [Prevotella denticola F0289] Length = 645 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 3/226 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L + + + ++ ++ + L + + S+ Sbjct: 2 MFRIRKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGK-GLSMDVLGQFFWYM 60 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +++ Q +P L+ +++ + NL +SEL ++ GIS+ Q +V S+L+ + Sbjct: 61 SLMMVPQALPLAILLSSLISYGNLGESSELTAIKSAGISLVQSFRGLIVISVLIACGSFY 120 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + S +K L+ K + + + + Sbjct: 121 FQNNVGPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMV 180 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + + II L K + + ++ + Sbjct: 181 YRMTDSYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQE 226 >gi|111115643|ref|YP_710261.1| hypothetical protein BAPKO_0861 [Borrelia afzelii PKo] gi|110890917|gb|ABH02085.1| hypothetical protein BAPKO_0861 [Borrelia afzelii PKo] Length = 355 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 116/353 (32%), Gaps = 9/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + + F K + T L L MIL+ + DL E N S+ + +P Sbjct: 3 IDKLFVKSIILTFLSMNLIFMILIILGDLFVNLLNFLEK-NISLKDIFYIYYLYLPKAFS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + L + NL+ +E++ + G+ + ++L P ++ S+ + + N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILRPIILISVFISVVLFFFDNYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 LI+ N II K + + + + I Sbjct: 122 IDTVAKRDLLIKNSIGNNGSIDKTIII-----RDLAREIYNIKSYDIDENAFSNLMIIIK 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D K++ R D + A ++K KL + E+ I +N+ + + + + Sbjct: 177 DSKDEFQTRYDINKAEWKDNKWKLYGIREFVKVGRKIKENAYDVLDGTGIIKLEPDYIRT 236 Query: 245 ASRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + K+ + + L+ + L++ +V + Sbjct: 237 VMLSSKALNFTKLINWISFLKSEHLNYSDALFDLLNRIFFSFRLMLLSFTVGFIALALKK 296 Query: 304 PRIIVAY--GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I++ I + I I G L A+ I + ++ L+ Sbjct: 297 NIFILSLLNSIAFAVVYVISIVIFSFLADLGYLNIYVASSFTTIFFLIINFLV 349 >gi|288925668|ref|ZP_06419600.1| putative permease [Prevotella buccae D17] gi|288337606|gb|EFC75960.1| putative permease [Prevotella buccae D17] Length = 638 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 1/151 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ + L +++ S+ A ++ Sbjct: 5 KKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYIDELIGK-GLSMEVLAQFFWYMSLML 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL +A GIS+ Q + ++++ + N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQTFRSLIFITVVVMGCSFYFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWM 153 I L+ K + + + Sbjct: 124 IGPQANMKITQLLISMKQKSPELEIPEGIFY 154 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 25/95 (26%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + E + + + I A + R + V + + Y + Sbjct: 364 GDRIIRQHEIEAINKFTLAFSCLIFFFIGAPLGA-IIRKGGLGVPVIVSVLVFIVYYILD 422 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + + I L+ + + Sbjct: 423 NTGYRMARGGMWAVWFGKGLAPAVLIPLAAFVTYK 457 >gi|313203466|ref|YP_004042123.1| permease yjgp/yjgq family protein [Paludibacter propionicigenes WB4] gi|312442782|gb|ADQ79138.1| permease YjgP/YjgQ family protein [Paludibacter propionicigenes WB4] Length = 493 Score = 60.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 57/151 (37%), Gaps = 1/151 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + Y FK ++ L L + ++ + L + +++ S A + + Sbjct: 5 KKIDSYIFKRFITQFLMTFLICIFILLMQFLWKHVSELIGK-GVGWSVLAEFFIYAIFSV 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL EL +A GIS+++++ P ++ + + N Sbjct: 64 VPMALPLAILLASLMTFGNLGENFELTAMKAAGISLFRIIRPLIIFISFVCVGAFFFSNY 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWM 153 + + L+ K + + Sbjct: 124 VLPVAQTKLYTLVISLKQKSPELDIPTGEFY 154 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 31/104 (29%), Gaps = 1/104 (0%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + S + + + E + + + + I A + R + V + Sbjct: 353 EYNKTMIGSQVTYITKHEIERHRKFTLSFACLIFFFIGAPLGA-IIRKGGLGMPVVISVI 411 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I K G+ L + + + + I + + Sbjct: 412 MFIIYYIIDNTGYKMVKEGLWLSYQGMWLSSFVLLPIGIFLTYK 455 >gi|163759136|ref|ZP_02166222.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] gi|162283540|gb|EDQ33825.1| hypothetical protein HPDFL43_05210 [Hoeflea phototrophica DFL-43] Length = 385 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 118/346 (34%), Gaps = 15/346 (4%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 T + L A +LV + + + + +LAAT +P +I + PF L+ Sbjct: 5 TFWSLTAATLLVMTTQVLIRVD-VLTTTGQAFGAFMLLAATIIPSVISVVAPFALLIGVS 63 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 V +N SELV+ A G +L P + S+ L I +LV N + + D++ Sbjct: 64 QVLSGMNSDSELVVIEAAGARPATVLRPVMALSVALSIMVLLVANFVEPWSNRKLYDVLA 123 Query: 137 QWKDNGDKQKSDIIPWM------QISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 Q + + +M + ++ I + + +I K I Sbjct: 124 QAQSDLFSVAVRSGTFMKLEDGLYVQVNEKLPGGALSGIFLSDTRTDGTEAIYYAKSGVI 183 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 D ++ ++ + +++ + Q + + + + + S + Sbjct: 184 QPEGDTNILLLLDGELQQRDTSNDQISIVTFSSYALDMAAFVPAGQNAARRPKEQSTGYL 243 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML--VAMTLIAASVSLEFSRSNQPRIIV 308 + + + Q + + PL +A + + S + ++ Sbjct: 244 LAPPSDDYYAGNAPYIIKEELVQRFSTWLYPLAFGLIAFAFLGKARSNRHEQFQNGALVA 303 Query: 309 AYGIFS-GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + GF Y++ S V + L+P +L + L Sbjct: 304 GIALGARGFGFYSVEEAGASSAME-----VLSYLVPGMLIVLFGAL 344 >gi|224373131|ref|YP_002607503.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] gi|223589255|gb|ACM92991.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] Length = 340 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 113/352 (32%), Gaps = 18/352 (5%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y K Y K L L +ID +++ + N + + Sbjct: 5 YIIKKYAKNFLLILFSLAFFFVIIDFIANFSKLPDSSNLQVLYLYYIVLYS----FDMFY 60 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P + + + + + +ELV ++G S+ ++L PF+ S L+ + + + Sbjct: 61 PLAIVFSFLFTMYYMIKFNELVSFYSLGFSVKKILKPFLTFSFLIFFIFIALDSGKMAYV 120 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + ++ + + + + + I A I + + K Sbjct: 121 REYADSILNKRQYSNTNLFIKFNDKIIYIKKIKPILKEAIDIR-----------VFVLKD 169 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 K+ A A+ ND + K I K + K Sbjct: 170 GKVKKIISAKKAVFVNDIWQAKNAEITFINDKKITKIRNDIFFLKNFKP--KIVSNLKKL 227 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + + + + ++ I L L+ + ++ R + + Sbjct: 228 NSISLYDAIIAIKIFKDVNVNTLLSMVFYKIFTALSLIGLIIVFIFQVPIHQRISNVSLF 287 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + +F +++ I ++ F K G++ P +P + S + +L+++E Sbjct: 288 LVKSVFLTILIWGIQLMIYKFSKQGVISPYVLM-VPCFIIYSYGVYLLIKEE 338 >gi|205356326|ref|ZP_03223091.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345711|gb|EDZ32349.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 341 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 106/347 (30%), Gaps = 21/347 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY +L T L +V ++ ++ S L +P I+ Sbjct: 6 RYVLNQFLSTNLSIFFVLFAIVSMVFFI-QLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + + F L++ +E ++ +G S L F+ + L+ F ++V + Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + +K K + Q EN I DK Sbjct: 125 VFELQDNFV-NYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKADDK 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + II ++ + L + Y + + + Sbjct: 184 EQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGE-----------FDTLVVNTQ 232 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + K + +++ N + +F I I L +A TL A L R + + Sbjct: 233 FNTDNLQTKKFYEYWNDLNENPQRAREFVIYITIALFPLASTLFALCFGLVTYRYEKGYV 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + P+ A L L++ +S Sbjct: 293 YLGMFGVIAIYFGLLSSFSQ--------PPILACLGIFSLSLFVSAY 331 >gi|325527102|gb|EGD04517.1| YjgP/YjgQ like transporter [Burkholderia sp. TJI49] Length = 363 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 35/353 (9%), Positives = 89/353 (25%), Gaps = 45/353 (12%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + ++ + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAAS-GEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V R SE+V+ A G+S+ +L+ P V + + + Sbjct: 61 AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + + + + + FI TS Sbjct: 121 WPWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTE 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K N ++ + + V L+ Y + Sbjct: 181 NGKVNVVVSQTGHTETRDGDRFVVLENGRRYDGTPGQPNFKIMEFQRYGVKITSTPVVNV 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + +F + +PL+ + + ++ ++ + R ++ Sbjct: 241 PTTNSTPTLD--------LLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLAYQNPRRSR 292 Query: 304 P------------------------------------RIIVAYGIFSGFMLYT 320 + + GF+ + Sbjct: 293 TINLVMAVLIYLTYSNLLNVVQAQIEQGKMSFGVGLLGLHLIVAAIVGFIFWL 345 >gi|315606454|ref|ZP_07881469.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315251860|gb|EFU31834.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 638 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 54/151 (35%), Gaps = 1/151 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ + L +++ S+ A ++ Sbjct: 5 KKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYIDELIGK-GLSMEVLAQFFWYMSLML 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL +A GIS+ Q + ++++ + N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQTFRSLIFITVVVMGCSFYFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWM 153 I L+ K + + + Sbjct: 124 IGPQANMKITQLLISMKQKSPELEIPEGIFY 154 Score = 44.3 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 25/95 (26%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + E + + + I A + R + V + + Y + Sbjct: 364 GDRIIRQHEIEAINKFTLAFSCLIFFFIGAPLGA-IIRKGGLGVPVIVSVLVFIVYYILD 422 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + + I L+ + + Sbjct: 423 NTGYRMARGGMWAVWFGKGLAPAVLIPLAAFVTYK 457 >gi|15604701|ref|NP_221219.1| hypothetical protein RP871 [Rickettsia prowazekii str. Madrid E] gi|6831726|sp|Q9ZC95|Y871_RICPR RecName: Full=Uncharacterized protein RP871 gi|3861396|emb|CAA15295.1| unknown [Rickettsia prowazekii] Length = 360 Score = 60.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 122/355 (34%), Gaps = 5/355 (1%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P ++ + Sbjct: 6 KYFIKNILPLLIIVTFSVTSIVWITQILKLLYLFDK--GIKVIDFFNLVVLVLPTLLFIL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ + ++ NL +L+I + G++ QL P + ++ + + + + I Sbjct: 64 LPIITVIAVLYIYNNLKVERQLIILQTSGVNNIQLALPALYVALTIMLLAYYISSTILPL 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + K+N + + +I+ N I + Sbjct: 124 SHINLKSRLNFIKNNYISSMIEEKTFNKITKNITVFIDKKLTGNIMNGIIIFDNRNADNP 183 Query: 187 KNKIIHR---KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 I+ L++ + + +S + + + ++ Sbjct: 184 SVVFAGSGTLNIYGNNPIFELNKGLRQEYDANGNLTQLTFDSLMIKLQNNSSLTSQRTQN 243 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + Y I + ++ S+ I + + + I+ PL + +A +V L + S + Sbjct: 244 NKEANEYYISELLTPSHDLVITKKIKLIAEAHQRIIWPLYNFVLPCLALAVFLRYPYSKK 303 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + T I + S L + A +++ +++ + +L+ K Sbjct: 304 TTFMPVLFSALTVLFVTAIHFILQNFASKNLDFIFACYFNLLVALTIGLYLLVHK 358 >gi|86150264|ref|ZP_01068491.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597526|ref|ZP_01100760.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218562454|ref|YP_002344233.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839380|gb|EAQ56642.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190118|gb|EAQ94093.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360160|emb|CAL34954.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926071|gb|ADC28423.1| putative integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315927714|gb|EFV07043.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 341 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 105/347 (30%), Gaps = 21/347 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY +L T L +V ++ ++ S L +P I+ Sbjct: 6 RYVLNQFLSTNLSIFFVLFAIVSMVFFI-QLAKLTSSIEISFLDLLKLYGFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + + F L++ +E ++ +G S L F+ + L+ F ++V + Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISAFMLVVALVMIPI 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + +K K + Q EN I DK Sbjct: 125 VFELQDNFV-NYKSTQVKFNYKTGEFGQKFLDWMIFIEKQDSDKYENIIMYRPKHKADDK 183 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + II ++ + L + Y + + + Sbjct: 184 EQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSGE-----------FDTLVVNTQ 232 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + K + +++ N + +F I L +A TL A L R + + Sbjct: 233 FNTDNLQTKKFYEYWNDLNENLQRAREFVIYTTIALFPLASTLFALCFGLVTYRYEKGYV 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + P+ A L L++ +S Sbjct: 293 YLGMFGVIAIYFGLLSSFSQ--------PPILACLGIFSLSLFVSAY 331 >gi|78067267|ref|YP_370036.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] gi|77968012|gb|ABB09392.1| YjgP/YjgQ like transporter [Burkholderia sp. 383] Length = 363 Score = 59.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 35/353 (9%), Positives = 90/353 (25%), Gaps = 45/353 (12%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + ++ + I VL V + Sbjct: 2 IFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAAS-GEIDPRDVLVLIGLTVIGYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V + V R SE+V+ A G+S+ +L+ P V + + + Sbjct: 61 AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLIAFFAFVG 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ + + + + + FI TS Sbjct: 121 WPWSNQQSKMIKARFQQRDEISLLAPGQFRESATNHRVFFIEKMTPDQSKVQNVFVTSTE 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 K N ++ + + V L+ Y + + Sbjct: 181 NGKVNVVVSQTGHTETRDGSRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSTPVTNV 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + +F + +PL+ + + ++ +S + R ++ Sbjct: 241 PTTNSTP--------TPDLLRNPTNDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSR 292 Query: 304 P------------------------------------RIIVAYGIFSGFMLYT 320 + + + F+ + Sbjct: 293 TINLVMAVLIYLTYSNLLNVVQSQIEQGKMSFGVGLVGLHLVVAVIVAFIFWL 345 >gi|225010828|ref|ZP_03701296.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-3C] gi|225005036|gb|EEG42990.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-3C] Length = 462 Score = 59.7 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 1/88 (1%) Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 + + L + + + A + R + + I Y + Sbjct: 347 YNMHALSLHKKYALALSCIVLFFVGAPLGA-IIRKGGLGLPMVIAIVLFLTYYFLGVFTY 405 Query: 327 SFGKSGILLPVAAALIPVILTISLSILI 354 ++ K G + P A IP ++ + L I + Sbjct: 406 NYAKEGNISPFFGAWIPTLVMLPLGIFL 433 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 72/245 (29%) Query: 26 ILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRT 85 + +F+ + + +P + ++++P L+ +I+ F Sbjct: 1 MFIFIFQSIWLYIDNLAGKGLDLVIIGKFIFYLLPNLTEKVLPLTVLLSSILTFGTFAEH 60 Query: 86 SELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQ 145 E +A GIS+ + + +V +LG+ T + I + E L + Sbjct: 61 YEFAAMKASGISLQRSMRTLIVLVSVLGLVTFYFADRIIPAAELKSYSLKKNIAKVKPAV 120 Query: 146 KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDK 205 + + I + K + ++ + D + K + ++ ++ Sbjct: 121 AIAEGLFSEFEGTGMTILVQEKYGENDRYLRDVTIHKKTDNQINTTVIKAKEGELLSSEN 180 Query: 206 VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF 265 L K+V +T+ N F + E+ Sbjct: 181 SNLIKLVLKDGHYYESLSVTTSKNHQKHPYAVSNFETYTINIDLTELNMVDMDEQTEGNS 240 Query: 266 HNYRA 270 + Sbjct: 241 DKMKN 245 >gi|330813916|ref|YP_004358155.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487011|gb|AEA81416.1| putative permease YjgP/YjgQ family protein [Candidatus Pelagibacter sp. IMCC9063] Length = 358 Score = 59.7 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 35/350 (10%), Positives = 98/350 (28%), Gaps = 8/350 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L YF L++ + L L+++ + S+S ++P I+ Sbjct: 6 LNNYFIAEILRSYAFVLATLSFLIWIAQSARFL-YLITDMGLSMSVYVPYILYQLPKIVS 64 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 Q++ L+ + E+ I G+S ++ + S++ + +A Sbjct: 65 QMMLISFLISLFISIIKFQNNKEMEIYWLSGVSKKTIVWTILKISLVPTFVAFFLYIYLA 124 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 I +++ + + + ++ Sbjct: 125 PMTGLISRNILANSEFTFVNALVKKNNF------NSPFRNLTVYVGENDNRGNLEKVYLF 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + II ++ L + + ++L +Q + + ++ + Sbjct: 179 ENNKTIIAKQGKVLNVDNKNYLQLIDGFIHQKNKNGKIQIIKFEETLYDFTKYKSNLTTY 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 ++ + +N + + I PL + + L+ + + Sbjct: 239 PKLQERSLLWLFNELK-NNRKEKNNTIFEIHKRIFKPLFIPIIALLCCFILYGNNEKFNL 297 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + I+ S S I P+ + I + + Sbjct: 298 VKLRFSIFSLSVLFIIFFEILISLSSSNIFFQYFLYSFPMCVGIIIYFFL 347 >gi|153808346|ref|ZP_01961014.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] gi|149129249|gb|EDM20465.1| hypothetical protein BACCAC_02640 [Bacteroides caccae ATCC 43185] Length = 638 Score = 59.7 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 1/158 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K ++ + + + + L +++ +S A + Sbjct: 11 KKLDIFIVKSFMMLFVGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTL 69 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F N EL+ +A GIS+ +++ P V L + N Sbjct: 70 VPVSLPLAVLLASLITFGNFGERYELLAMKAAGISLLKIMRPLVFFVCGLVGISFYFQNV 129 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ 160 + + LI K + + Sbjct: 130 VGPIAQAKLGTLILSMKQKSPELDIPEGVFYSEIPDYN 167 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 24/239 (10%), Positives = 61/239 (25%), Gaps = 1/239 (0%) Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N A S + + ++ + + AK + + Sbjct: 224 FENLKAQSMKSQNVPYRRESFREKHTIIEFDSDFNMVDGDIMGRQSSAKDMAQLQSSIDS 283 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + K + + +S P+ Sbjct: 284 MKVLGDSIGRQYYKEVAEGNFRASYGLTKEDTAKIEKADIQEYNVDSLYEVSPLMQKQKV 343 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 S + + + S++ ++N + + +T+++ I I L + I A + Sbjct: 344 ISSAVSRAENMASDLTFKSYTMETNDYAIRKHKTEWHKKITISLSCLLFFFIGAPLG-GI 402 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + V + + Y I + G + + L I + + Sbjct: 403 IRKGGLGMPVIVSVLVFIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 461 >gi|312148449|gb|ADQ31108.1| putative permease, YjgP/YjgQ family [Borrelia burgdorferi JD1] Length = 355 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 112/353 (31%), Gaps = 9/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + + F K + T L L MIL+ + DL E N + + +P Sbjct: 3 IDKLFIKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEK-NIGLKDILYIYYLYLPKAFS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + L + NL+ +E++ + G+ + ++L P ++ SI + + N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L++ + I K + + + + I Sbjct: 122 IDTIARRDVLVKNSIGDS-----RSGDKTIIIRDFAREIYNIKSYDIDENTFANLMIIIK 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D K++ R D + A ++K +L + E+ I +N+ + + + Sbjct: 177 DNKDEFQTRYDINKAEWKDNKWRLYGIREFVKVGKKIKENAYDVLDGTGIIKLAPDYIRT 236 Query: 245 ASRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + K+ F+ L+ + L++ +V + Sbjct: 237 VMLSSKALNFTKLINWISFLKAERLNYSDAFFDLLNRIFFSFRLILLSFTVGFIALALKK 296 Query: 304 PRIIVAY--GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I++ I + I I G L A+ I + ++ + Sbjct: 297 NIFILSLLNSIAFAVVYVISIVIFNFLADLGYLHIYIASSFTTIFFLIINFFV 349 >gi|332851503|ref|ZP_08433500.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332866797|ref|ZP_08437201.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] gi|332729956|gb|EGJ61287.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013150] gi|332734405|gb|EGJ65525.1| permease, YjgP/YjgQ family [Acinetobacter baumannii 6013113] Length = 341 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 107/319 (33%), Gaps = 5/319 (1%) Query: 40 MGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW 99 + S + R+P + I+P + ++VF L E+ + G++ Sbjct: 12 VAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVNRH 71 Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ 159 QL + +++ + +++ + G + L ++ Sbjct: 72 QLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYT 131 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI 219 ++ I+ + K + +I K+A + ND + +V+ + I Sbjct: 132 IYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRVEVANDTANVVDLVQGRRYEI 191 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 + T + + ++ +S S + ++ ++ + + Sbjct: 192 FPGQPKYT--QAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPVVRSELGWRLF 249 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 P ++ +++ ++S R + ++ IF L ++ +K+ G L Sbjct: 250 GPFTIIIALMLSVALSEVSPRQGRYYRLIP-SIFIFASLIVLMIAIKTRISKGELDIW-- 306 Query: 340 ALIPVILTISLSILILLQK 358 A +L +++ + +K Sbjct: 307 AYPVALLVYAIAAALFSRK 325 >gi|15595153|ref|NP_212942.1| hypothetical protein BB0808 [Borrelia burgdorferi B31] gi|195941982|ref|ZP_03087364.1| hypothetical protein Bbur8_03794 [Borrelia burgdorferi 80a] gi|216264628|ref|ZP_03436620.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi 156a] gi|218249833|ref|YP_002375306.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi ZS7] gi|221217616|ref|ZP_03589085.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 72a] gi|223889339|ref|ZP_03623926.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 64b] gi|224533064|ref|ZP_03673669.1| permease, YjgP/YjgQ family [Borrelia burgdorferi WI91-23] gi|224533456|ref|ZP_03674049.1| permease, YjgP/YjgQ family [Borrelia burgdorferi CA-11.2a] gi|225549381|ref|ZP_03770353.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 94a] gi|225550246|ref|ZP_03771205.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 118a] gi|226321273|ref|ZP_03796801.1| permease, YjgP/YjgQ family [Borrelia burgdorferi Bol26] gi|2688753|gb|AAC67159.1| predicted coding region BB0808 [Borrelia burgdorferi B31] gi|215981101|gb|EEC21908.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi 156a] gi|218165021|gb|ACK75082.1| putative permease, YjgP/YjgQ family protein [Borrelia burgdorferi ZS7] gi|221192562|gb|EEE18780.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 72a] gi|223885260|gb|EEF56363.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 64b] gi|224512000|gb|EEF82396.1| permease, YjgP/YjgQ family [Borrelia burgdorferi WI91-23] gi|224513418|gb|EEF83776.1| permease, YjgP/YjgQ family [Borrelia burgdorferi CA-11.2a] gi|225369114|gb|EEG98568.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 118a] gi|225370009|gb|EEG99450.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 94a] gi|226233305|gb|EEH32056.1| permease, YjgP/YjgQ family [Borrelia burgdorferi Bol26] gi|312149740|gb|ADQ29811.1| putative permease, YjgP/YjgQ family [Borrelia burgdorferi N40] Length = 355 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 112/353 (31%), Gaps = 9/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + + F K + T L L MIL+ + DL E N + + +P Sbjct: 3 IDKLFIKSIILTFLSMNLLFMILIMLGDLFVNLLNYLEK-NIGLKDILYIYYLYLPKAFS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + L + NL+ +E++ + G+ + ++L P ++ SI + + N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 LI+ + I K + + + + I Sbjct: 122 IDTIARRDVLIKNSIGDS-----RSGDKTIIIRDFAREIYNIKSYDIDENTFANLMIIIK 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D K++ R D + A ++K +L + E+ I +N+ + + + Sbjct: 177 DNKDEFQTRYDINKAEWKDNKWRLYGIREFVKVGKKIKENAYDVLDGTGIIKLAPDYIRT 236 Query: 245 ASRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + K+ F+ L+ + L++ +V + Sbjct: 237 VMLSSKALNFTKLINWISFLKAERLNYSDAFFDLLNRIFFSFRLILLSFTVGFIALALKK 296 Query: 304 PRIIVAY--GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I++ I + I I G L A+ I + ++ + Sbjct: 297 NIFILSLLNSIAFAVVYVISIVIFNFLADLGYLHIYIASSFTTIFFLIINFFV 349 >gi|57168449|ref|ZP_00367583.1| probable integral membrane protein Cj0313 [Campylobacter coli RM2228] gi|57020257|gb|EAL56931.1| probable integral membrane protein Cj0313 [Campylobacter coli RM2228] Length = 352 Score = 59.3 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 108/354 (30%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK L + IDL N + + N S+ LA + Sbjct: 3 IFFRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPDAANLSLLYVIFLAF----SAV 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ ++ R +E V A+G+S ++ + ++ V + Sbjct: 59 TYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFLWALFFCFVYVGLNFTP 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + + + +D + Sbjct: 119 FAYANDYKRNILKNGTMLKQSGEVFLKFNNEFIYISKVNNGQSTAQNIKIFNIKDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + I K + N + K+ G + K + + Sbjct: 179 FIEAKSGIFEKKNWILKEGNLTLLPKEYELGNKGLNISEFKELNTLEGFKPKIIEGVASD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + Y L+ +P + LI +R Sbjct: 239 SDYSILDILESL--ELFKTQNISIESLKISLYKLVFMPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + ++ ++ ++G++L ++P++L I L + + Sbjct: 297 LAFVAFVAFVVTLLTWGMLFLLSRLSENGVILSELGIVMPIVLLIFLGGFMFYK 350 >gi|283954397|ref|ZP_06371917.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] gi|283794014|gb|EFC32763.1| hypothetical protein C414_000220013 [Campylobacter jejuni subsp. jejuni 414] Length = 341 Score = 59.3 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 102/347 (29%), Gaps = 21/347 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY +L T L +V ++ ++ S L +P I+ Sbjct: 6 RYVLNQFLSTNLSIFFVLFTIVSMVFFI-QLAKLTSSIQISFLDLLKLYGFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + + F L++ +E ++ +G S L F+ + L+ ++V + Sbjct: 65 LPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFLKIASLISALMLVVALVMIPI 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + IFI + +I D Sbjct: 125 VFELQDNFVNYKSIQVKFNYKTGE--FGQKFLDWMIFIEKQDSGKYENIIMYHPKHKADD 182 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 K ++I K+A + + + S + + F Sbjct: 183 KEQLIIAKEAHVQRKDDGFAFSLNQGKMYNFDQGQSIFSGEFDTLVVNTQF--------- 233 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + K + +++ N + +F I L +A TL A L R + + Sbjct: 234 -NTDNLQTKKFYEYWNDLNENPQRAREFVIYATIALFPLASTLFALCFGLVTYRYEKGYV 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + P+ A L++ +S Sbjct: 293 YLGMFGVIAIYFGLLSSFSQ--------PPILACFGIFSLSLLVSGY 331 >gi|289678194|ref|ZP_06499084.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 284 Score = 59.3 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 81/271 (29%), Gaps = 16/271 (5%) Query: 95 GISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ 154 G S +LL + + L+G+ + +A G LI Q + + Sbjct: 1 GRSQQRLLAITMGPATLVGLLVAWLSFSLAPQGATQFSLLINQQDAMTEFDTLVPGRFQA 60 Query: 155 ISNPQQDIFI--------GAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKV 206 + + + + + S + + ++ + + Sbjct: 61 LRDGTRITYTKELSEDRSQLAGVFISEKRMSSDKSKDNGITVLVAEKGHQEVRPNGSRFL 120 Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 L+ Y D + M + SE+ R + + Sbjct: 121 ILENGYRYDGNPGAADYRVIKYDTYGAMLPKPEISEEITDREAIPTSELIGN-------P 173 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 R+ + + I +PL + +TL+A +S R + + + I I+ ++ Sbjct: 174 APRSVAELQWRISLPLSVFIVTLMAIPLSRVNPRQGRY-LKLLPAILLYMSYLAILISVR 232 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQ 357 S + G L + +S+ +L+ Sbjct: 233 SSLEKGKLPLSLGMWWVHAIYLSIGLLLFYW 263 >gi|301346207|ref|ZP_07226948.1| permease YjgP/YjgQ family protein [Acinetobacter baumannii AB056] Length = 201 Score = 59.3 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 53/158 (33%), Gaps = 1/158 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY K + T+L + +++ L + + S + R+P + Sbjct: 2 IIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFG-VAAQGRLDASILFSIIGYRLPEFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+P + ++VF L E+ + G+S QL + +++ + +++ + Sbjct: 61 TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWM 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQD 161 G + L ++ Sbjct: 121 TPWGLREFEKLTTTQAVRTGFDLVRPREFISSGPYTIY 158 >gi|289612795|emb|CBI60020.1| unnamed protein product [Sordaria macrospora] Length = 187 Score = 59.3 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 58/152 (38%), Gaps = 2/152 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP I RY + LL + +L+ + + + + + +S + A +P Sbjct: 1 MPSI-DRYMARLIAVPLFSTLLISAMLLVLDRMLRLFDFVAAEGG-PVSVVWRMLANLLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IP ++ ++ F L +SEL + +G+S W+LL + + +L + ++ Sbjct: 59 EYLGLGIPIGLMLGILLAFRKLATSSELDVMLGVGMSYWRLLRVPFIYATVLAAANLAIV 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 I L + + + + Sbjct: 119 GYIQPLARYNYEALRFELRTGALGASIKVGEF 150 >gi|261879842|ref|ZP_06006269.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270333501|gb|EFA44287.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 642 Score = 59.3 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 69/221 (31%), Gaps = 1/221 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + + + L ++ + L + + S+ A ++ Sbjct: 6 KKLDIFITRQFGLLFLGTFFICQFVLMMQFLWRFVDDLIGK-GLSMEILAQFFWYMALML 64 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q P L+ +++ F NL +SEL +A GIS+ Q ++ ++++ + + N Sbjct: 65 VPQAFPLAILLSSLITFGNLGESSELTAIKAAGISLMQSFRSLILITMIICLGSFYFQNN 124 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I L+ K + + + + + + Sbjct: 125 IGPMANMKLAQLLFSMKQKSPELEIPEGVFYDGIPNTNLYVQKKDVKTGKLYGIMIYRMT 184 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + II L + K L + ++ ++ Sbjct: 185 QSYEDAAIILADSGMLQSTADKKHLLLSLWSGEWFENMQNQ 225 Score = 40.1 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 26/95 (27%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 N + E + + L + I A + R + V + + Y + Sbjct: 364 NERVIRQHEIEAINKFTLALQCLIFFFIGAPLGA-IIRKGGLGVPVIVSVLVFIVYYILD 422 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + L ++ + + Sbjct: 423 NSGYRMARLGVWAVWFGRGLAPALLTPVAAFVTYK 457 >gi|237718006|ref|ZP_04548487.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452647|gb|EEO58438.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 380 Score = 59.3 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 102 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 160 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + + Sbjct: 161 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGVFLTYK 203 >gi|240948566|ref|ZP_04752939.1| hypothetical protein AM305_06766 [Actinobacillus minor NM305] gi|240297074|gb|EER47645.1| hypothetical protein AM305_06766 [Actinobacillus minor NM305] Length = 309 Score = 59.3 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 88/293 (30%), Gaps = 6/293 (2%) Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q ++P + ++ SE+ + RA GI L + SI V + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLAKVALFLSIFTTALAVYNVF 60 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +L+ + K N +M + I + + D Sbjct: 61 WLTPWAINKQSELLAEAKANPRFSALSAGQFM----TAGGYVLFIDNINYDQNKLNDIYV 116 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D++ K + +++ + + + + Sbjct: 117 FQPDQQKKNRPSVIVADSGELKGLPNGDQILTLENSTRYEGTAKVADFRISHFENYTAYL 176 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S +++++ ++ A + + + M L+A +S R Sbjct: 177 GHQDVDSDEKLVQRADWAKLVADKS-PEARAELQWRFALIFATPIMALLAVPMSSVNPRQ 235 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + ++ + + + +KS G SG L P + + + L I++ Sbjct: 236 GRFAKLLPALLLYLIYF-LLQSTLKSSGASGKLDPTILMPVVSVAFLILGIVM 287 >gi|298207835|ref|YP_003716014.1| hypothetical protein CA2559_06260 [Croceibacter atlanticus HTCC2559] gi|83850473|gb|EAP88341.1| hypothetical protein CA2559_06260 [Croceibacter atlanticus HTCC2559] Length = 456 Score = 59.3 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 + E + V+ + + A + R + + I + I K+ Sbjct: 336 NKYEIALHEKYVLAFACFILFFVGAPLGA-IIRKGGMGLPMVIAILLFLTYHFIGIFAKN 394 Query: 328 FGKSGILLPVAAALIPVILTISLSILILLQ 357 + G + P A + I+ + L + + Sbjct: 395 SAEDGSISPFIATWLSTIIMLPLGVYFTYR 424 >gi|86142618|ref|ZP_01061057.1| hypothetical protein MED217_06881 [Leeuwenhoekiella blandensis MED217] gi|85830650|gb|EAQ49108.1| hypothetical protein MED217_06881 [Leeuwenhoekiella blandensis MED217] Length = 514 Score = 59.3 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 10/89 (11%), Positives = 31/89 (34%), Gaps = 1/89 (1%) Query: 269 RAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSF 328 + E + V+ + + + A + R + + G+ + I K+ Sbjct: 343 KYEIALHEKFVLAFGCIILFFVGAPLGA-IIRKGGLGLPIVIGVVLFLTYHFIGIFAKNS 401 Query: 329 GKSGILLPVAAALIPVILTISLSILILLQ 357 + G + A+ + ++ L + + + Sbjct: 402 AEDGSVAAWLASWLSTLILFPLGVYLTYR 430 >gi|296137009|ref|YP_003644251.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] gi|295797131|gb|ADG31921.1| permease YjgP/YjgQ family protein [Thiomonas intermedia K12] Length = 377 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/336 (10%), Positives = 100/336 (29%), Gaps = 7/336 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L + + +V + L I Q + S +L + Sbjct: 2 LLDLTLRREMSRNFGGAFTVLFTVVITLMLIRILGQASD-GQASPQDVFLLIGLTALSYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q +I + ++ F + SE+ I R G+ +L+ + S + + + Sbjct: 61 QIVITLSLFLAVLLTFTRMWLDSEMTIWRTTGVGRLRLMVSVLRFSWPILLLIAALTLFA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L +++ D + + + ++ ++ FI T Sbjct: 121 WPWANQQSTALRIRFEQRSDISRVAPGQFRESASGKRVFFIDKGAQAGGVAHDIFIRDDT 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLNIPIKMDGFQ 238 + I R I + L Y Q +S + + Sbjct: 181 SGQTVLITARSAQVQRIDGQPFLVLSNGNRYAHTPGQANYTITSFDSLDMRLDATTGLSN 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + ++ + + + + + +PL + L+A ++ Sbjct: 241 VADNKTGPVNWLTQPNRNVPTEYLFNPAIPNWLGELSWRLGVPLSAALLALMALPLASGS 300 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 R+ + +++ I + + ++ +++ + G + Sbjct: 301 VRTGRAGSLIS-AILVYLIYFNLLNVLQGWISEGRV 335 >gi|219684936|ref|ZP_03539877.1| permease, YjgP/YjgQ family [Borrelia garinii PBr] gi|219671674|gb|EED28730.1| permease, YjgP/YjgQ family [Borrelia garinii PBr] Length = 355 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 112/353 (31%), Gaps = 9/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + + F K + T L L MIL+ + DL E N + +P Sbjct: 3 IDKLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEK-NIGFKDILYIYYLYLPKAFS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + L + NL+ +E++ + G+S+ ++L P ++ S+ + N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 LI+ N II K + + I Sbjct: 122 IDTVARRDLLIKNSIGNSGSSDKTIII-----RDLAREIYNIKSYDINENAFSKLMIIIK 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D K++ R D D A ++K +L + E+ I +N+ + + + + Sbjct: 177 DSKDEFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRT 236 Query: 245 ASRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + K+ + + L+ + L++ +V + Sbjct: 237 VMLSSKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKK 296 Query: 304 PRIIVAY--GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I++ I + I I G L A+ + + ++ L+ Sbjct: 297 NIFILSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTVFFLIINFLV 349 >gi|148651871|ref|YP_001278964.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] gi|148570955|gb|ABQ93014.1| permease YjgP/YjgQ family protein [Psychrobacter sp. PRwf-1] Length = 494 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 56/176 (31%), Gaps = 1/176 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 +P IL RY + TT L ++L+ + + + + +P Sbjct: 21 LPVILRRYMTRQVASTTALVLGFLVVLLLGGRMIRYFG-IAAEGRLDVGLLFSIIGYNLP 79 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ ++P + ++VF L E+ + GIS +L + ++L + + Sbjct: 80 YFLELVLPLSFFIGLMLVFGRLYVDHEMAVLNGSGISRGRLARLIIPLILVLFVLEAGLS 139 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW 176 G K + QQ + ++ + + + Sbjct: 140 LYGKPWGVKNSESIWQQQSLSSAFDLIRPQTFINSDDYHLYVGSMNDNKTELQDVI 195 >gi|152990135|ref|YP_001355857.1| hypothetical protein NIS_0386 [Nitratiruptor sp. SB155-2] gi|151421996|dbj|BAF69500.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 343 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 117/351 (33%), Gaps = 16/351 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +RY YLK L L+ + +D ++ + N I + + I Sbjct: 3 YRYLAINYLKYFLLLLISLTLFFVSLDYFQVFKSLPASANLQI----LYLYYKSLNAIDL 58 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P + I + L R++ELV A+G S ++ P + S+LL I + + Sbjct: 59 LFPITLIFALIALKNRLIRSNELVAIYALGYSKRGVVMPVFLTSLLLTILYLFLHLTSFA 118 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ ++ + + + + + + L + + Sbjct: 119 YADEYANNIKKYQSLSSAT---------KDLFFKYNNDYVFFEKLYPLNKRAQGIKVYEL 169 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI--PIKMDGFQKFSEQ 243 + K+ A A L + + + L+I K E Sbjct: 170 ENQKLQKIIFAQSATFQKRSWHLSDATIVEVSDGKLIERKADLSILQNYKPKILDSVYEG 229 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +S + + ++ + + + + R + ++ ++ P + +I +R Sbjct: 230 KSSITLIDALEAIKLLKQQS-LNVDRIKAIIFYQLLFPFFAPFLMIIIYYFVPVTARITN 288 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + +++ + + +G L A + P+ L + +++ + Sbjct: 289 LNLFLFGATVTSLIVWGFLFTLVKLAFNGSLDAWYAIVFPISLLLVIALYL 339 >gi|312885912|ref|ZP_07745544.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] gi|311301719|gb|EFQ78756.1| permease YjgP/YjgQ family protein [Mucilaginibacter paludis DSM 18603] Length = 463 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 1/111 (0%) Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 +RS +I+K + N R ++ + + + LI A + R Sbjct: 324 NEARSLKDIVKPKGDTYIENDKILRRYLIEYQKKFTLSAACLVLFLIGAPLGA-IIRKGG 382 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + V + + Y I TI + K G + PV + + + + + + Sbjct: 383 LGLPVVISVVFFLIYYIISTIGEKSAKDGNISPVLGTWVAIFVLAPIGLFL 433 >gi|257465009|ref|ZP_05629380.1| hypothetical protein AM202_00770 [Actinobacillus minor 202] gi|257450669|gb|EEV24712.1| hypothetical protein AM202_00770 [Actinobacillus minor 202] Length = 309 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/293 (12%), Positives = 89/293 (30%), Gaps = 6/293 (2%) Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q ++P + ++ SE+ + RA GI L + SI V + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLAKVALFLSIFTTALAVYNVF 60 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +L+ + K N +M + I + + D Sbjct: 61 WLTPWSINKQSELLAEAKANPRFSALSAGQFM----TAGGYVLFIDNINYDQNKLNDIYV 116 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 D++ K + +++ + + + + Sbjct: 117 FQPDQQKKNRPSVIVADSGELKGLPNGDQILTLENSTRYEGTAKVADFRISHFENYTAYL 176 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 S +++++ ++ A+ + + + M L+A +S R Sbjct: 177 GHQDVDSDEKLVQRADWAKLVADKS-PEAQAELQWRFALIFATPLMALLAVPMSSVNPRQ 235 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + ++ + + + +KS G SG L P + + + L I++ Sbjct: 236 GRFAKLLPALLLYLIYF-LLQSTLKSSGASGKLDPTILMPVVSVAFLILGIVM 287 >gi|34540406|ref|NP_904885.1| hypothetical protein PG0598 [Porphyromonas gingivalis W83] gi|34396719|gb|AAQ65784.1| hypothetical protein PG_0598 [Porphyromonas gingivalis W83] Length = 651 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 9/105 (8%), Positives = 25/105 (23%), Gaps = 1/105 (0%) Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 M S +++ P+ + I A + R + + Sbjct: 367 CMIMKESTAFERDRRISHMREWHTKFTYPVACLIFFFIGAPLGA-IIRKGGLGTPIVASV 425 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y + T K+ + + + + + Sbjct: 426 LFFVLYYMVDTFGVKMAKTEEWPVWLGMWLSTFVLVPFGFFLTYK 470 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/188 (10%), Positives = 59/188 (31%), Gaps = 1/188 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L+ + + +L L +V + L + + M S + + + Sbjct: 7 KRLYLFMLQTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGK-GLSAIILSKMLFYAAMTL 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL EL+ ++ G+ +++++ P + + + N Sbjct: 66 VPMALPLGVLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACGLFIFQND 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + ++ + + + + + H + Sbjct: 126 LMIQSQVKFYTILFSARRATPELEIPEGSFYNGIRGYNLFVAKKDRRTGMLHDMMIYDHS 185 Query: 183 TIDKKNKI 190 +I Sbjct: 186 QGFADARI 193 >gi|146299866|ref|YP_001194457.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] gi|146154284|gb|ABQ05138.1| permease YjgP/YjgQ family protein [Flavobacterium johnsoniae UW101] Length = 486 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 2/134 (1%) Query: 224 NSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + TL + K + + + Y I + T Y VI Sbjct: 320 DLLTLYTNKEKSDVLKMASSNVTSNIYSIETTQKDLKDK-QREINKHLTALYEKFVIAFA 378 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 M I A + R + + + + + I T K + G + P + + Sbjct: 379 CFLMFFIGAPLGA-IIRKGGLGLPIVFAVLIFITFHFINTFGKRLSQEGGMSPFMGSWMS 437 Query: 344 VILTISLSILILLQ 357 + L+IL+ + Sbjct: 438 SFILSPLAILLTYR 451 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 1/162 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K +L T + + + + +++ + + +P Sbjct: 1 MKILDKYLLKTFLFTFTTVFVILFFIFILQTVWLFISELAGK-DLDLLLVVKFLLFSMPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++P L+ +I+ F NL E ++ GIS+ + + ++ +L I N Sbjct: 60 IIPLVLPLSVLLASIMTFGNLAENYEFAAMKSSGISLQRAMRVLIIFIFVLSIVAFWFAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 + E ++ + + + + Sbjct: 120 NVIPYAEYKFVNFRKNIAQAKPAMAIAEGQFNDVGTYNIKVN 161 >gi|305432868|ref|ZP_07402026.1| integral membrane protein [Campylobacter coli JV20] gi|304444022|gb|EFM36677.1| integral membrane protein [Campylobacter coli JV20] Length = 352 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 109/354 (30%), Gaps = 6/354 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I +R+ YLK L + IDL N + + N S+ LA + Sbjct: 3 IFFRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPDAANLSLLYVIFLAF----SAV 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ ++ R +E V A+G+S ++ + ++ V + Sbjct: 59 TYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFLWALFFCFVYVGLNFTP 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++++ + + + + + + +D + Sbjct: 119 FAYANDYKRNILKNGTMLKQSGEVFLKFNNEFIYISKVNNGQSTAQNIKIFNIKDLNLSS 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + I K + N + K+ G + K + + Sbjct: 179 FIEAKSGIFEKKNWILKEGNLTLLPKEYELGNKGLNISEFKELNTLEGFKPKIIEGVASD 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + K+ + Y L+ +P + LI +R Sbjct: 239 SDYSILDILESL--ELFKTQNISIESLKISLYKLVFMPFFAPFLMLIMYYFFPVIARFFN 296 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + ++++ ++ ++G++L ++P++L I L + + Sbjct: 297 LAFVAFVAFVVTLLTWSMLFLLSRLSENGVILSELGIVMPIVLLIFLGGFMFYK 350 >gi|294341186|emb|CAZ89587.1| putative permease YjgP/YjgQ [Thiomonas sp. 3As] Length = 377 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/336 (10%), Positives = 101/336 (30%), Gaps = 7/336 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L + + +V + L I Q + S +L + Sbjct: 2 LLDLTLRREMSRNFGGAFTVLFTVVITLMLIRILGQASD-GQASPQDVFLLIGLTALSYL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q +I + ++ F + SE+ I R G+ +L+ + S + + + Sbjct: 61 QIVITLSLFLAVLLTFTRMWLDSEMTIWRTTGVGRLRLMISVLRFSWPILLLIAALTLFA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + L +++ D + + + ++ ++ FI T Sbjct: 121 WPWANQQSTALRIRFEQRSDISRVAPGQFRESASGKRVFFIDKGAQAGGVAHDIFIRDDT 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEY-----QYGRIPIDKNSTTLNIPIKMDGFQ 238 + I R I + L Y Q +S + + + Sbjct: 181 SGQTVLITARSAQVQRIDGQPFLVLSNGNRYAHTPGQANYTITSFDSLDMRLDATIGLSN 240 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + ++ + + + + + +PL + L+A ++ Sbjct: 241 VADNKTGPVNWLTQPNRNVPTEYLFNPAIPNWLGELSWRLGVPLSAALLALMALPLASGS 300 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 R+ + +++ I + + ++ +++ + G + Sbjct: 301 VRTGRAGSLIS-AILVYLIYFNLLNVLQGWISEGRV 335 >gi|317503835|ref|ZP_07961845.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315665031|gb|EFV04688.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 632 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 55/163 (33%), Gaps = 1/163 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ + L +++ S+ A ++ Sbjct: 5 KKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDELIGK-GLSMEVMAKFFWYMGLML 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL +A GIS+ Q +V +I + + + N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKAAGISLMQSFRSLIVITIFISGLSFVFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 I L+ + + + + Sbjct: 124 IGPEANNKIAQLMISMQQKSPELEIPEGVFYDGIPNSNLYVQH 166 Score = 43.1 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 27/95 (28%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + E + + L + I A + R I V + + Y + Sbjct: 361 GDRIIRQHEIEAVSKFTVALSCLIFFFIGAPLGA-IIRKGGLGIPVIVSVLVFIIYYILD 419 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +SG+ + + L+I + + Sbjct: 420 NSGYRMARSGMWTVWFGKGLAPGVLTPLAIFVTYK 454 >gi|188994506|ref|YP_001928758.1| hypothetical protein PGN_0642 [Porphyromonas gingivalis ATCC 33277] gi|188594186|dbj|BAG33161.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 651 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 9/105 (8%), Positives = 25/105 (23%), Gaps = 1/105 (0%) Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 M S +++ P+ + I A + R + + Sbjct: 367 CMIMKESTAFERDRRISHMREWHTKFTYPVACLIFFFIGAPLGA-IIRKGGLGTPIVASV 425 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y + T K+ + + + + + Sbjct: 426 LFFVLYYMVDTFGVKMAKTEEWPVWLGMWLSTFVLVPFGFFLTYK 470 Score = 51.2 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/188 (10%), Positives = 60/188 (31%), Gaps = 1/188 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L+ + + +L L +V + L + + M S + + + Sbjct: 7 KRLYLFMLQTFLPLLLMTFAICWFVVLMQFLWKYVDDMVGK-GLSAIILSKMLFYAAMTL 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ +++ F NL EL+ ++ G+ +++++ P + + + N Sbjct: 66 VPMALPLGVLLASLMTFGNLGERLELLAMKSAGVPLYRIMKPLFFSVVAIACGLFIFQND 125 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + + ++ + + + + + + H + Sbjct: 126 LMIQSQVKFYTILFSARRATPELEIPEGSFYNGIHGYNLFVAKKDRRTGMLHDMMIYDHS 185 Query: 183 TIDKKNKI 190 +I Sbjct: 186 QGFADARI 193 >gi|57167826|ref|ZP_00366966.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] gi|57020948|gb|EAL57612.1| conserved hypothetical integral membrane protein, putative [Campylobacter coli RM2228] Length = 341 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 108/351 (30%), Gaps = 21/351 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY +L T L +V ++ ++ + + L +P Sbjct: 1 MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFI-QLAKLTSSIEINFADLLKLYGFMLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ +P + + F L+R +E ++ +G S L F+ + L+ +++ Sbjct: 60 ILIFTLPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIAL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + + +K K + Q + EN I Sbjct: 120 VMIPIVFELQDNFV-NFKKTQVKFNYKTGEFGQRFLEWMIFIEKQESDRYENIIMYHPKR 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK+ II ++ + KL Y + +N TL I Sbjct: 179 NIEDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNF------ENGQTLFIGNFDKLIVNTQ 232 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + N + + +F + I L +A TL A S + R Sbjct: 233 FNDQNLQTKKFYEYWNDLNTN-----PKRAKEFVIYVTIALFPLASTLFALSFGIVTYRY 287 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + + + P+ A + L+ SI Sbjct: 288 EKGFIYFGMFGVIAVYFGLLSSFSQ--------PPILACIGIFALSFIASI 330 >gi|15605868|ref|NP_213245.1| hypothetical protein aq_359 [Aquifex aeolicus VF5] gi|14916753|sp|O66685|Y359_AQUAE RecName: Full=Uncharacterized protein aq_359 gi|2983036|gb|AAC06646.1| putative protein [Aquifex aeolicus VF5] Length = 356 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 116/351 (33%), Gaps = 10/351 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L RY +L L +++LV + L + E +PL Sbjct: 2 LLDRYLLSRFLGIFLNVSFVSVLLVSLYALLDFLVGFKEKR---TDVALSYFLNILPLGF 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I + I+ + + ++ GIS + P ++ S+ L +L Sbjct: 59 YYISFITLSISLILFLRKVFEKKMELTVQSFGISPLRFSLPVLLFSVFLSSTFLLGNEYA 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +K + + W + + + + +F ++ Sbjct: 119 FPKLLGNLWFIEKNYKKKQEVKGFIKNFWFIKKENEVKTYYHVGNLNLSDGSLFNFYTMK 178 Query: 184 -IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK-NSTTLNIPIKMDGFQKFS 241 K + + + ++ ++ Y + + +K + T + + + + FS Sbjct: 179 VERKNLNPLEVLKVFSGVWKDKEIFIRSGEIYDFEKGKREKVFNKTFKLGLSIKEVELFS 238 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E+ S EI M S K + + ++ ++ L V +++ + + + Sbjct: 239 EKIDFLSLSEIFFLMQKSKKVG-LNVDVYTGELFYRVMFSLSPVFISIFSLYLFFKHKVL 297 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 +Q I +++ I+ PV +LIP+ L I S+ Sbjct: 298 SQVIPRFLVFIVILWLVILSPKILPQKANQ----PVLYSLIPIFLLILYSL 344 >gi|225851251|ref|YP_002731485.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] gi|225646479|gb|ACO04665.1| putative permease, YjgP/YjgQ family [Persephonella marina EX-H1] Length = 337 Score = 58.9 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 104/353 (29%), Gaps = 19/353 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL+RY K LK L + I++ L + + + I+ L Sbjct: 1 MKILYRYITKNILKNFLVLIAVFSIVIVSSQLLHL---PSVMYHADITNFFKLLFLMNLS 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ + F + ++ FN+ E+ + GI+ QL+ P VV S+++ +++V Sbjct: 58 FLKFQLLFAFFLSTALLGFNMRENREIYAVYSAGITKGQLIKPLVVISLIIFTVSLIVSM 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + I + Q+S+ + EN + Sbjct: 118 FVVPYANRERAKFITLNIKRYFLDAVQEKNFFQLSDNVTIYTEKKEGNRFENVFIYNRER 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + D + +++ + R + + + K + Sbjct: 178 GQTISAKE--AFFDTTTFFLKKGYIQIPDEKGFNILRFESYRFNIDVEYLKKYSIEDYRN 235 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + K + RA + I+ P + + ++ + Sbjct: 236 KDLLMI------------IKKSKKDKNRALSVLTDRILFPFPFLFIGVLG--FMVGIKTQ 281 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++A + + + G + P A + + S++ Sbjct: 282 KGKDSVIATTVLISIVYLVLNFYFIKLIGKGKIDPSVYAFVLLAYFSSITYYF 334 >gi|255034852|ref|YP_003085473.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] gi|254947608|gb|ACT92308.1| permease YjgP/YjgQ family protein [Dyadobacter fermentans DSM 18053] Length = 498 Score = 58.6 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 54/154 (35%), Gaps = 1/154 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 L + + + + + + + + + + ++ A L + Sbjct: 1 MKKLDKLILTSFWGPFVITMSVVVFVFLMRIMIFYIDDFVSK-DLNVMDYAQLFFFFSLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + +P L+ +++ F NL EL ++ GIS+ + + P + ++ + +F+ + Sbjct: 60 TVPTALPLAMLLSSLMAFGNLGEFFELTAIKSAGISVVRAMAPLFIVAVGISVFSFYFND 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 ++ G L+ K K + Sbjct: 120 RVSPWANLKGYSLLYDIKTTKATLKIKEGIFYND 153 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/222 (9%), Positives = 63/222 (28%), Gaps = 1/222 (0%) Query: 136 QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKD 195 + + + + ++ K +I + + + + +K+ Sbjct: 241 YSNFNRQSFRHYRMTESLASFGMKRTDEGQFKYHEFMKNISDLTHTADSLRTSYQETKKN 300 Query: 196 ADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKK 255 ++ + + T + + + + AS S IK Sbjct: 301 LVSGSQQYYSYNYREGTDKTIKPGKWIDSLVTRPVSDSLKKEILTNTKAASNSMLSYIKS 360 Query: 256 MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSG 315 ++ + + E + + L + M LI A + + + V I Sbjct: 361 QQDYLQTKLKDASKYELEKHHKYTQALSCLIMFLIGAPLGAIIKK-GGFGVPVLVSILFF 419 Query: 316 FMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +LY + + K G++ A + + + + + Sbjct: 420 ILLYVLTNQGDKWVKEGLVAVPVGAWMANTILFLTGMYFIDR 461 >gi|163782091|ref|ZP_02177090.1| hypothetical protein HG1285_18199 [Hydrogenivirga sp. 128-5-R1-1] gi|159882623|gb|EDP76128.1| hypothetical protein HG1285_18199 [Hydrogenivirga sp. 128-5-R1-1] Length = 357 Score = 58.6 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 72/233 (30%), Gaps = 3/233 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I RY +LK ++ L+ + L + E ++ G +PL Sbjct: 1 MNIFDRYLLLNFLKVFSAISFVSVGLIVLYSLTDFLLGFKET---NLEVGLKYTLYLIPL 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + + + IV+F ++ GIS + FV +++L + + Sbjct: 58 GFYILSSLLVNIALIVLFRRFFSKGVDFTVQSFGISPLRFSAVFVGFTLVLSSLFLFLNE 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 K + + +K + + W ++ + + + Sbjct: 118 SFLPGLFKRVWYIEKTYKKKQEIGRLVERLWFVKKTSFGKYYVYIGSLDVTSGKFAGLFM 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 + + + K+ + + + + + Y +G + ++ ++ Sbjct: 178 LRVSSEGKVKEVVEGKSGRWSGNVIYVDRGSAYNFGEGYFVRELKEFSLSAEI 230 >gi|333029769|ref|ZP_08457830.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] gi|332740366|gb|EGJ70848.1| permease YjgP/YjgQ family protein [Bacteroides coprosuis DSM 18011] Length = 632 Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 56/160 (35%), Gaps = 1/160 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L ++ K + + + + + L + + ++ + Sbjct: 5 KKLDKFVLKSFGLLFIATFFICLFIFMMQFLWRYVDDLVGK-GLEMTVLGQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P TL+ +++ F N EL+ +A GIS+++++ P ++ ++LL + + N Sbjct: 64 IPASLPLATLLASLITFGNFGERFELLAMKAAGISLFKIIRPLMILAVLLCGISFVFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI 162 I L+ + + + + Sbjct: 124 IGPKAFSKLTTLLISIRQKSPELDIPEGIFYDEIDGYNIF 163 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 30/110 (27%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S K+ R ++ I + + I A + R + Sbjct: 348 SLATDWSFREVEVKNTDLQIRRHLMAWHEKITLSFACLVFFFIGAPLG-SIIRKGGLGMP 406 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + Y I T+ + G + + ++ + + + Sbjct: 407 VVISVLIFIIYYIINTMGSKMAREGEWIVWIGMWMSTLILAPVGGFLAYK 456 >gi|305432149|ref|ZP_07401315.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] gi|304444814|gb|EFM37461.1| conserved hypothetical integral membrane protein [Campylobacter coli JV20] Length = 341 Score = 58.6 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 107/351 (30%), Gaps = 21/351 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + RY +L T L +V ++ ++ + L +P Sbjct: 1 MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFI-QLAKLTSSIEINFVDLLKLYGFMLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ +P + + F L+R +E ++ +G S L F+ + L+ +++ Sbjct: 60 ILIFTLPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKFFLKIAALVSALMLIIAL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ + + +K K + Q + EN I Sbjct: 120 VMIPIVFELQDNFV-NFKKTQVKFNYKTGEFGQRFLEWMIFIEKQESDRYENIIMYHPKR 178 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 DK+ II ++ + KL Y + +N TL I Sbjct: 179 NIEDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNF------ENGQTLFIGNFDKLIVNTQ 232 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + + N + + +F + I L +A TL A S + R Sbjct: 233 FNDQNLQTKKFYEYWNDLNTN-----PKRAKEFVIYVTIALFPLASTLFALSFGIVTYRY 287 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSI 352 + I + + + P+ A + L+ SI Sbjct: 288 EKGFIYFGMFGVIAVYFGLLSSFSQ--------PPILACIGIFALSFIASI 330 >gi|296448501|ref|ZP_06890381.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] gi|296254000|gb|EFH01147.1| permease YjgP/YjgQ family protein [Methylosinus trichosporium OB3b] Length = 387 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/371 (11%), Positives = 114/371 (30%), Gaps = 22/371 (5%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L+ Y + L + + V + L P Sbjct: 1 MPRLLFTYLARRILFSMAVVQFALSVPVVLSYLLYTLTPAAIRAGLLAPALIG----TTP 56 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ +P V + F ++ + + A+ +S+W + P +V + + + + Sbjct: 57 TVVYITLPMAIGVATALEFARMSSEGMIAVLYALRLSVWSVCRPAIVCAGAMVLIGYGLA 116 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N IA D+I ++ + + + + N + +++ + Sbjct: 117 NLIAPHYAGALQDVINVVRNTLNHRMLEPARFYTFDNGLKTLYLERWETPDIAVNLFVRQ 176 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKL--KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + I A+ + + ++ + + + + + Sbjct: 177 LSLAKNQEETITAARAEFRRTPSGVILALSHGSIQTRPFDSTEVRIAGFDEYAMALPMQG 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY-----FLIVIPLMLVAMTLIAAS 293 S S + + F ++ R + + +P + A TL+A + Sbjct: 237 SESLPARSWRGVYEMGPLEFLGNWSVARLDRRLSGEWAAEAAKRFGMPALSFAHTLLAMA 296 Query: 294 VSLEF----SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT-- 347 + L F R V + + + + + + P A L+ ++ Sbjct: 297 LVLTFGNVTGRRGASSSFVMIAVPATHIFFLV-----ALETLLRADPRYAILLAALICVE 351 Query: 348 ISLSILILLQK 358 I+ + ++ ++ Sbjct: 352 IATAATLISRR 362 >gi|170729351|ref|YP_001774784.1| hypothetical protein Xfasm12_0115 [Xylella fastidiosa M12] gi|167964144|gb|ACA11154.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 361 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 115/361 (31%), Gaps = 16/361 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ + L+ M++ L +I + + ++ R Sbjct: 1 MPK-LDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIAD-GHFPAKLLLSQLGLRFI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P ++ ++ L R SE+ + +IG+ ++L + + + + + Sbjct: 59 SYLPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + DL++Q + + + + + + + + Sbjct: 119 LWLAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQS 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + + ++L+ N L + Sbjct: 179 QKDDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPEL 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S + A+ Q + + PL+ +A L+ +S R Sbjct: 239 SVVYDSNHPDILPTF-----NLIGDPRREAQAQLHARLAPPLLALAFALLVLPLSRSAPR 293 Query: 301 SNQPRIIVAYGIFSGFMLYT----IITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + F++Y ++ + + +G + PV + + +++ + Sbjct: 294 QQRYG-----AVMMCFLVYMVGTNLMIVGTQWIANGKISPVWGLWWLTLPLLLVAVWLYA 348 Query: 357 Q 357 + Sbjct: 349 R 349 >gi|219685681|ref|ZP_03540495.1| permease, YjgP/YjgQ family [Borrelia garinii Far04] gi|219672797|gb|EED29822.1| permease, YjgP/YjgQ family [Borrelia garinii Far04] Length = 355 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 112/353 (31%), Gaps = 9/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + + F K + T L L MIL+ + DL E N + +P Sbjct: 3 IDKLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEK-NIGFKDILYIYYLYLPKAFS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + L + NL+ +E++ + G+S+ ++L P ++ S+ + N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 LI+ N II K + + I Sbjct: 122 IDTVARRDLLIKNSIGNSGSIDQTIII-----RDLAREIYNIKSYDINENAFSKLMIIIK 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D K++ R D D A ++K +L + E+ I +N+ + + + + Sbjct: 177 DSKDEFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRT 236 Query: 245 ASRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + K+ + + L+ + L++ +V + Sbjct: 237 VMLSSKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKK 296 Query: 304 PRIIVAY--GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I++ I + I I G L A+ + + ++ L+ Sbjct: 297 NIFILSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTVFFLIINFLV 349 >gi|84516313|ref|ZP_01003673.1| Predicted permease [Loktanella vestfoldensis SKA53] gi|84510009|gb|EAQ06466.1| Predicted permease [Loktanella vestfoldensis SKA53] Length = 369 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 101/354 (28%), Gaps = 7/354 (1%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + +F L +++ + + +Q+ S A +P +I+ +P Sbjct: 1 MLSQLIMLCGFFGLVLVLVYSINRAVLLFDQLI-ADGQSAGVFVEFTALTLPSVIRLALP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 I V + SELV+ +A G S++++ P + +++ + L+++ + Sbjct: 60 LAAFAAAIYVTNRMTNDSELVVVQATGYSLFRIARPVLYFGLIVALLMSLLMHFLVPRSA 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + N + + + ++ T D+ Sbjct: 120 AQLALRQTEIARNVTARLLTPGTFTEPIAGVTFYIRDLSPDGELFDLFLSDTRGIEDQVT 179 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEY----QYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 R V + +V+ + N+ + + + Sbjct: 180 YTASRAFLVREAQETQLVMIDGMVQTLRLADQRLFTTRFAEFSYNVGGLLAPVTQAGRRA 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS-VSLEFSRSNQ 303 + S +E++ R + L+ + LI + + + Sbjct: 240 SHLSTWELLHPTPALVAETGSSAARMIADGHDRFSQSLLGMVAALIGFATLMVGSYSRFG 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I ++ + T + ++ +P + + +L Sbjct: 300 VWRQIVAAIALIVVVKALETAGLNAARADA-QLWFLTYLPGAGGLVIVWCLLFW 352 >gi|167856193|ref|ZP_02478930.1| hypothetical protein HPS_08256 [Haemophilus parasuis 29755] gi|167852682|gb|EDS23959.1| hypothetical protein HPS_08256 [Haemophilus parasuis 29755] Length = 308 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 91/293 (31%), Gaps = 8/293 (2%) Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + Q ++P + ++ SE+ + RA G+ L+ + SI V + Sbjct: 1 MAQLMLPLSLFIALLLTLGRFYAESEITVMRACGVGQSLLVKAALFLSIFTTAVAVYNVF 60 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +++ + K N +M I + + ++++ Sbjct: 61 WLTPWAINKQSEMLAEAKANPRFAALAAGQFMSAGGYVLFIDNIKDNTINDIYVFQPEQQ 120 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + L Y+ D + + G+Q Sbjct: 121 KKNKPSVVVAKSGELQGLPNGDQMLNLTNSTRYEGTPQTADFRISHFDNYNAYLGYQDVD 180 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + K +S + A+ + + + + L + M L+A +S R Sbjct: 181 SDEKLVQRADFQKLLSE-------TSPEAQAELQWRLALILSVPLMALLAVPMSSVNPRQ 233 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + ++ + + + +KS G SG L + + + L L+ Sbjct: 234 GRFAKLLPALLLYLIYF-LLQSSLKSAGASGKLNVSLLMPMVSVAFLVLGTLL 285 >gi|34498370|ref|NP_902585.1| hypothetical protein CV_2915 [Chromobacterium violaceum ATCC 12472] gi|34104224|gb|AAQ60583.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 368 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/316 (9%), Positives = 88/316 (27%), Gaps = 8/316 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 + + + T L + + ++ + + E + + A++ + Sbjct: 2 VFQKSLTRELTLTALGVFVVLLAIIVSTQAINLLGRAAEGQIANEAVTALIGFWTL-GFF 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ V +VV R E+V+ + G+S+ + P + ++ L I V + Sbjct: 61 PVLMILTVFVSVLVVLTRTWRDHEMVVWLSAGLSLRDWVWPIMRFTLPLAILIAGVTLFV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ-DIFIGAKKILPENHIWEDFTSI 182 ++ D + K + + + ++ + + Sbjct: 121 GPWADQRSQDYAEIIKRREEISAISPGVFKESASSSKVYFIENYSGLHSAATNIFMQDMT 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + L+ Y D + Sbjct: 181 DGKVSTIFAKHGYISIKPDGERVLVLEDGKRYVGEPGQADYQIGEFKRYT-----ASLGD 235 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 A + + S N + + + +P+ + + L+A +S RS Sbjct: 236 SQAVTGPASNRQSIPTSVLLAGSGNPEYRAELAWRLSMPISCILLALLALPLSYYNPRSG 295 Query: 303 QPRIIVAYGIFSGFML 318 + + + + F+ Sbjct: 296 HT-YNLLFALLAFFVY 310 >gi|15807417|ref|NP_296150.1| hypothetical protein DR_2430 [Deinococcus radiodurans R1] gi|6460254|gb|AAF11980.1|AE002073_10 hypothetical protein DR_2430 [Deinococcus radiodurans R1] Length = 350 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 98/346 (28%), Gaps = 11/346 (3%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P IL R + LK L + L F L+ + + A +P Sbjct: 3 PSILPRSILREVLKMYGAGLALLLALQFADTLSSTLGKAIAYRATASESATAFLAI-LPT 61 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I + + ++ L R SEL + A GI L+ P ++ L+G Sbjct: 62 IFNRALVLSVPFAILLGLSRLQRDSELKAAFAAGIRPLSLVWPLLLPFTLVGALAFWNAG 121 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + +G + +K + + A ++ + Sbjct: 122 TVVPAGLDRWDKTWYSIFNVPEKIPTRDNY----TYAPPGALYYAGRVTQAPQGQPAPLA 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + ++ +++ ++ L G P + + D + Sbjct: 178 GVMVQRGGVVYTANSGSWNTAAQSWTLDAPWVTAPGERPRQQAGPV--TLPQGDTLRPPP 235 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S + ++ Q P +A L AA + L Sbjct: 236 AEAKKVSNAALRTALA-GESLTEQERREYTYQLASRYADPFTPIAFALAAAVLGLLI--- 291 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 +A I Y + M ++G + P AA +P ++ Sbjct: 292 RNQAAALAAVIVFIAGFYVLWITMPQLARAGAVDPTLAAWVPSLIF 337 >gi|237653449|ref|YP_002889763.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] gi|237624696|gb|ACR01386.1| permease YjgP/YjgQ family protein [Thauera sp. MZ1T] Length = 360 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 115/357 (32%), Gaps = 12/357 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + + +T + ++ L + Q L + Sbjct: 2 IFRRALQREFAQTAAAVFVALFAILISTVLIRLLGQAAG-GRVPPDAVVALIGFGALAQL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + +V R SE+V+ A G+ + + P ++ ++ + + + Sbjct: 61 PTVLTLTLFIAILVSLSRSYRDSEMVVWFASGVPLTAWIRPVLMFALPVVLVAGGGSLYL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 ++ + ++ ++ D + + + ++ Q+ F+ + T Sbjct: 121 TPWSQQKSAEYRERLENRDDTHRVAPGVFRESASAQRVFFVEVGAGEDGRVRNVFVSEQT 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVK--LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +I + L + + L+K Y + + ++ + Sbjct: 181 RSGQLVVIASAEGYLRGDADGRRFVVLEKGRRYDGTPGTPEYRVMEFDRYEVQVEQKQVA 240 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 Q A ++ + +P + + + L+A +S R+ Sbjct: 241 GQQARIRALPTAVLLAQPEPRGLGELV-------GRFGVPAVALLLALMAIPLSFVNPRA 293 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + ++ + I + +S+ G L VA L+P ++ +++ + ++ K Sbjct: 294 GRANNLLVALLVYLLYSNAIS-VFQSWVAQGKLPFVAGLLLPHVVVLAV-LALMFHK 348 >gi|315638229|ref|ZP_07893411.1| integral membrane protein [Campylobacter upsaliensis JV21] gi|315481765|gb|EFU72387.1| integral membrane protein [Campylobacter upsaliensis JV21] Length = 350 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 92/343 (26%), Gaps = 8/343 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I + + YLK + IDL + S + + Sbjct: 1 MSIFFHFISSIYLKNFFILFFALVGFYCGIDLLLNFKDLP----ASANLILLYVLFVGFS 56 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + ++ F + R +E V A+G+S +++ + ++L V + Sbjct: 57 AVTYILPISLIFALVLSFLTMIRNNEFVSLYALGLSKNRVIIYPFLWALLFCFIYVGLNF 116 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + NG K +++ + + + + E I+ Sbjct: 117 TSFAY----ANEYKRSILKNGVLNKKSSDIFLKFNEEFVYVKSLDEGVAKELKIFSLKDG 172 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + ++ + +N L S Sbjct: 173 NLSHLIQAKRALFNENSWLLEEGNITYIPKEFALGENGYKSENFANLETLEGFKPKLAKS 232 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + S + + Y LI P + LI +R Sbjct: 233 VASGKEYSIYDAYQSLILFDSQGLNTRNVKITIYKLIFAPFFAPFLMLIMYYYFPVIARF 292 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + +++ + + ++G++ ++P Sbjct: 293 FNLAFVAFVAFVVTLVVWGGLFVFLRLSENGVISGEFGIILPN 335 >gi|78049236|ref|YP_365411.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925501|ref|ZP_08186892.1| putative permease [Xanthomonas perforans 91-118] gi|78037666|emb|CAJ25411.1| putative YjgP/YjgQ family permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544093|gb|EGD15485.1| putative permease [Xanthomonas perforans 91-118] Length = 360 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/363 (9%), Positives = 101/363 (27%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + ++L + + + Sbjct: 179 QQNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +S + Q + + PL+ +A L+ +S Sbjct: 239 TRVHDANDPEVMWTTQLLSDERPAA-------RAQLHERLAPPLLALAFALLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWA--YA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|325300373|ref|YP_004260290.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] gi|324319926|gb|ADY37817.1| permease YjgP/YjgQ family protein [Bacteroides salanitronis DSM 18170] Length = 636 Score = 58.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 78/237 (32%), Gaps = 1/237 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + L +++ I+ A + Sbjct: 5 KKLDIFILKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGK-GLEINILAQFFFYSGLTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI + +++ P ++ LG+ + + N Sbjct: 64 IPISLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIMCPVILFCAFLGLMSFIFQNE 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I +K L+ K + + + + + Sbjct: 124 IGPRAQKKLWTLLVSMKQKSPEVDIPEGVFYSEIDGYNIYVKHKDRETGMLKDVLIYNFS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + II ++ L + + K + + ++ + N+P + + F++ Sbjct: 184 DGFENAHIIWAEEGKLEMTADKKHLYLHLYNGEQFENLKSQSVISRNVPYRRESFKE 240 Score = 42.8 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 1/143 (0%) Query: 215 QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 + I+ +S ++ + + S + SF K + + + Sbjct: 313 KLNVAYINTDSIFNSMTSQEKSSTLSKTENRVSSLLSECEMKSFLTKDTDRNILSHRSDW 372 Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + I + L + I A + R + V + + Y I + GKSG + Sbjct: 373 HKKITLSLACLIFFFIGAPLGA-IIRKGGLGMPVVISVVIFVIYYIIDSGATRVGKSGEM 431 Query: 335 LPVAAALIPVILTISLSILILLQ 357 + ++ L + Sbjct: 432 NVALGTWMSTLVLAPLGAFFTYK 454 >gi|294664573|ref|ZP_06729915.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605657|gb|EFF48966.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 360 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/363 (9%), Positives = 101/363 (27%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + ++L + + + Sbjct: 179 QQNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +S + Q + + PL+ +A L+ +S Sbjct: 239 TRVHDANDPEVMWTTQLLSDERPAA-------RAQLHERLAPPLLALAFALLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWA--YA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|32473921|ref|NP_866915.1| permease [Rhodopirellula baltica SH 1] gi|32444458|emb|CAD74456.1| conserved hypothetical protein-putative permease [Rhodopirellula baltica SH 1] gi|327542994|gb|EGF29442.1| permease YjgP/YjgQ family protein [Rhodopirellula baltica WH47] Length = 398 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 45/397 (11%), Positives = 116/397 (29%), Gaps = 46/397 (11%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P L R L+ + L+ +L+ +I + + L +P+ Sbjct: 3 PTRLTRTILFEILRIFVVALVVLTLLILLIAVGRELFR----KGLGAMAVLQLLPFAIPI 58 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +Q +P L V+ + E+ +A GIS +LL P +V + LL V + Sbjct: 59 SLQHAVPATALFSVCCVYGRMAADGEISTVKASGISPLRLLQPAIVFAALLSPVAVYCSD 118 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI---GAKKILPENHIWED 178 + G+ ++ ++ + + + G + I P + Sbjct: 119 MAVSWGKPGVKRVVLLSIEDIAYRLLERDHSYTSDHGFSIHVREIDGRRMISPRVTVRGK 178 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 ++ D + + V + + ++ + I ++ Sbjct: 179 GDDAFTVTASEGQLMMDEESLSLVLKLVDSQVIRGKGLQGDFYGEHQFEIPIGNALEETD 238 Query: 239 KFSEQFASRSFYEIIKK--------------------------------------MSFSN 260 + + I + + S Sbjct: 239 VSTRSPSELPLRLIRNERLRQRERTHAKIGELAAFTGFSLLTSRPAEIGGEKSSAIQSSL 298 Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 +S+ R +T+ + L+ A +++ S+ + + + Y Sbjct: 299 QSSRHRLTRLQTEPWRRWAEGFTCFFFVLVGAPLAIVAKTSDYWTTFGMCFLPTILVYYP 358 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + K+G + P I ++ + ++++ + Sbjct: 359 LYLLGLDQAKAGDMPPY-GVWIGNVVLSGVGMMLIAR 394 >gi|21244280|ref|NP_643862.1| hypothetical protein XAC3555 [Xanthomonas axonopodis pv. citri str. 306] gi|21109928|gb|AAM38398.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 360 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/363 (9%), Positives = 101/363 (27%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + ++L + + + Sbjct: 179 QQNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +S + Q + + PL+ +A L+ +S Sbjct: 239 TRVHDANDPEVMWTTQLLSDERPAA-------RAQLHERLAPPLLALAFALLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWA--YA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|255012652|ref|ZP_05284778.1| hypothetical protein B2_02000 [Bacteroides sp. 2_1_7] Length = 641 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 75/259 (28%), Gaps = 2/259 (0%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + +L L + +V + L + M I A + ++ +P Sbjct: 1 MLQTFLPLFLMTFGICLFIVLMQFLWRYIDDMVGK-GLGIPVLAEMFMYAALFLVPMALP 59 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 L+ +++ F NL EL+ ++ G+S+ ++ P +V + + + N + + Sbjct: 60 LAILLASLMTFGNLGERLELLAMKSAGVSLIHIMRPLIVTLLFVSVGAFFFQNNVMPVVQ 119 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 L+ + + + + + Sbjct: 120 VKLYTLLYSMRQKSPELDIPEGSFYKDIPGFNVYVKKKDPKDGLLKDVMIYDYSEGFNNA 179 Query: 189 KIIHRKDADLAIIYND-KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 ++I L + + L + + + +TT + FS + Sbjct: 180 RVIVADSGRLKTSADKLFLVLSLFNGESFENVGKSQANTTQARTAVPYRRESFSSKDILI 239 Query: 248 SFYEIIKKMSFSNKSNIFH 266 F + S N + Sbjct: 240 EFDANFNRTDESFMQNQYM 258 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 1/93 (1%) Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + R T+++ + + I A + R + V + Y I + Sbjct: 371 YKVRRHLTEWHKKFTVSFACIMFFFIGAPLGA-IIRKGGLGVPVVISVILFIFYYIIDNM 429 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + ++ + I + + Sbjct: 430 GFKMARDGVWDAWEGMWLSSVVLTPMGIFLTYK 462 >gi|294674577|ref|YP_003575193.1| hypothetical protein PRU_1912 [Prevotella ruminicola 23] gi|294473775|gb|ADE83164.1| putative membrane protein [Prevotella ruminicola 23] Length = 662 Score = 57.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 33/282 (11%), Positives = 78/282 (27%), Gaps = 5/282 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L + K + + ++ + L +++ S+ A Sbjct: 1 MFRIKKLDIFIAKQFGLLFVGTFFICQFVLMMQFLWRYVDELIGK-GLSLEVMAQFFWYM 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +++ Q P L+ +++ F NL +SEL +A GIS+ Q ++ S+L+ + Sbjct: 60 GLMLMPQAFPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIIISVLMAGISFY 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + + L+ K + + + + Sbjct: 120 FQNVVGPRANQDFYRLLLGMKQKSPELEIPEGVFYDGIPGSNIYVQKKDLNTGMLYGIMI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + II + K L + Y ++ + Sbjct: 180 YRMTGSYEDQAIILADSGMMQSTAEKKHLL--LTLYNGVWNENMRSQDLAGTADVPYRRE 237 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 F + F ++ + + + Sbjct: 238 TFVTKRIVLDFDNNFSMADINDIAGDARAKSLGKIMHDKDSL 279 Score = 43.1 bits (99), Expect = 0.068, Method: Composition-based stats. Identities = 9/97 (9%), Positives = 26/97 (26%), Gaps = 1/97 (1%) Query: 261 KSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYT 320 S + + Q + L + I A + R + V + + Y Sbjct: 361 NSLHRYFRTHQIQAILKFTLALTCIIFFFIGAPLGA-IIRKGGLGVPVIISVLVFIVYYI 419 Query: 321 IITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + + + I ++ ++ + Sbjct: 420 LDSTGQKMARDDQWTVWYGMTISTVVLAPIACFFTYK 456 Score = 35.8 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 62/236 (26%), Gaps = 13/236 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RYF + ++ L F L ++F + VP+II Sbjct: 363 LHRYFRTHQIQAILKFTLALTCIIFFF------------IGAPLGAIIRKGGLGVPVIIS 410 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++ FI + + R + + + IS L + +V+ + Sbjct: 411 -VLVFIVYYILDSTGQKMARDDQWTVWYGMTISTVVLAPIACFFTYKANNDSVVFNIDMY 469 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + L + + + S I K+ E+ + I + Sbjct: 470 KQVFMRILGLRTHRHIYRKEVIIEDPIYALDSYHLLQISEQIKQYSEEHKLLHLPNPIHV 529 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + + + + L + Q + + + Sbjct: 530 FFRPGDDQTIEKIVGQLEDVIDDLANTKDAQILGYLNHYPVVATHAHTRPFRRKWL 585 >gi|150002748|ref|YP_001297492.1| hypothetical protein BVU_0142 [Bacteroides vulgatus ATCC 8482] gi|149931172|gb|ABR37870.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 632 Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 4/248 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVLAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI + +++ P ++ L + N Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 IA + + L+ K + + + + Sbjct: 124 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II + + + + + + G + S T++ + F E Sbjct: 184 DGFENAHIIWASEGKMEMTADKQHLY---LHLYNGEQFENLKSQTISSNNVPYRRETFRE 240 Query: 243 QFASRSFY 250 + F Sbjct: 241 KHTIIEFD 248 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 1/109 (0%) Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 S+ + + E ++ I + L + I A + R + V Sbjct: 346 LASEWSMKSYQTTDADNNIRKHEADWHKKITLSLSCLIFFFIGAPLGA-IIRKGGLGMPV 404 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + Y I + KSG + V + I+ + + Sbjct: 405 VVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWMSTIVLAPIGAFFTYK 453 >gi|254882243|ref|ZP_05254953.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643195|ref|ZP_07997823.1| hypothetical protein HMPREF9011_03424 [Bacteroides sp. 3_1_40A] gi|254835036|gb|EET15345.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317385099|gb|EFV66050.1| hypothetical protein HMPREF9011_03424 [Bacteroides sp. 3_1_40A] Length = 632 Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 4/248 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVLAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI + +++ P ++ L + N Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 IA + + L+ K + + + + Sbjct: 124 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II + + + + + + G + S T++ + F E Sbjct: 184 DGFENAHIIWASEGKMEMTADKQHLY---LHLYNGEQFENLKSQTISSNNVPYRRETFRE 240 Query: 243 QFASRSFY 250 + F Sbjct: 241 KHTIIEFD 248 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 1/109 (0%) Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 S+ + + E ++ I + L + I A + R + V Sbjct: 346 LASEWSMKSYQTTDADNNIRKHEADWHKKITLSLSCLIFFFIGAPLGA-IIRKGGLGMPV 404 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + Y I + KSG + V + I+ + + Sbjct: 405 VVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWMSTIVLAPIGAFFTYK 453 >gi|228470134|ref|ZP_04055043.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] gi|228308272|gb|EEK17127.1| permease, YjgP/YjgQ family [Porphyromonas uenonis 60-3] Length = 683 Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 41/148 (27%), Gaps = 2/148 (1%) Query: 211 VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 V Y T ++ D + + +++ + + +YR Sbjct: 362 VSGYSDAAPTHYTLDTLMDRASDQDKLMGYKQALEWLDNLSSSVQIADTYYDDAASDYRV 421 Query: 271 E-TQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG 329 + + P+ + + A + R + + + Y I T Sbjct: 422 NAQEMHRKFTFPVACLLFFFVGAPLGA-IVRKGGVGTPMVLAVLIFIIYYVIDTFGLKMI 480 Query: 330 KSGILLPVAAALIPVILTISLSILILLQ 357 SG + A + + + L + + Sbjct: 481 NSGQIPVWAGMWLSSAVILPLGAFLTYK 508 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 57/153 (37%), Gaps = 1/153 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 P I++ + + +L L +L +V + L + + + + + Sbjct: 10 PKIMYIFMVRSFLPLLLMTILICWFVVLMQFLWQHIDDLVGK-GMDVGVLLEVIFYAGLY 68 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P L+ +++ F NL EL+ ++ G+ + +++ P V+ + + + ++ Sbjct: 69 VLPTAVPLGVLLASLMTFGNLGERLELLAMKSAGVPLSKIMKPLVILVTCIALGLFVYLD 128 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ 154 ++ + + + + Sbjct: 129 RGVQKASVRVYQILFSARYARPELELPKGIFFN 161 >gi|157164267|ref|YP_001466583.1| ribonuclease PH [Campylobacter concisus 13826] gi|112800701|gb|EAT98045.1| permease YjgP/YjgQ [Campylobacter concisus 13826] Length = 342 Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 111/349 (31%), Gaps = 20/349 (5%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +Y +L T +++ ++ ++ S L + +P ++ Sbjct: 5 NKYLLFNFLGTFASLFSTLFLIMSIVFFI-QIARITSYIEISFGELFKLYSFMLPRVLLF 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P V + F L++ +E ++ +G S ++ F+ S +L +++ + Sbjct: 64 VVPIAFFVSLAMTLFRLSKENESIVIFTLGGSPNKIARFFLAFSAILSAALLVIAIVMIP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ + I + + +++G++ ++D Sbjct: 124 IAAQLNANFI--DYKKTVAKLNLKPTQFGQKFSDWMVYVGSESEDKNGTTYKDIVMFNPF 181 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 K+ K+ V + + K + F+ + A Sbjct: 182 VKDSQRLI--------TAKNAKITNVNQSIELSLNEGKMYDIKDEIYHQSNFKSMKIRTA 233 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + + + + + F +++ L +A TL A S+ + R + Sbjct: 234 QSEEISDVGSIKE-YWMEAASSNKRKKDFSTYVLVALFPLASTLFAISLGIVTYRYEK-G 291 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++ F +T+I + S P A + + + +L+ Sbjct: 292 MVYVGTFGVLFGYFTLIMLFSS-------KPALAIPLIFFVFLIAGVLL 333 >gi|294776418|ref|ZP_06741896.1| putative membrane protein [Bacteroides vulgatus PC510] gi|294449744|gb|EFG18266.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 640 Score = 57.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 4/248 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 13 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVLAQFFFYSALTL 71 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI + +++ P ++ L + N Sbjct: 72 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 131 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 IA + + L+ K + + + + Sbjct: 132 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 191 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II + + + + + + G + S T++ + F E Sbjct: 192 DGFENAHIIWASEGKMEMTADKQHLY---LHLYNGEQFENLKSQTISSNNVPYRRETFRE 248 Query: 243 QFASRSFY 250 + F Sbjct: 249 KHTIIEFD 256 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 1/109 (0%) Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 S+ + + E ++ I + L + I A + R + V Sbjct: 354 LASEWSMKSYQTTDADNNIRKHEADWHKKITLSLSCLIFFFIGAPLGA-IIRKGGLGMPV 412 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + Y I + KSG + V + I+ + + Sbjct: 413 VVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWMSTIVLAPIGAFFTYK 461 >gi|300778309|ref|ZP_07088167.1| permease YjgP/YjgQ family protein [Chryseobacterium gleum ATCC 35910] gi|300503819|gb|EFK34959.1| permease YjgP/YjgQ family protein [Chryseobacterium gleum ATCC 35910] Length = 485 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 79/273 (28%), Gaps = 1/273 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY K + + + V + Q S + L Sbjct: 1 MLKILDRYIIKTFFGPFFFIFSVLFFIFIVNIIWVQLGQFMGK-GLSYWQILKLLFYLGV 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +I ++P L+ +I+ F EL +A GI + +++ P + S L I Sbjct: 60 NVISMVLPLTILLASIMSFGEFGERYELAAMKAAGIPLTRVMTPLLGISTALAIMLFFFS 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N I +K +++ ++ F EN Sbjct: 120 NNIIPDFQKKAKNMLFNIAQTKPAINFTPGQFIDQIPGYMVKFDKIYGENGENIEGVFVH 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 +N+ + + +K LK V+ Y + D KF Sbjct: 180 KKANAYENQQSVVAEKGKFVPAANKNYLKLVLYNGYVFEDAFAGKGDNVRQKQPDQAIKF 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ 273 + EII K + + ++ Q Sbjct: 240 DTLVSHFDISEIINKAIEKEQITDDYRFQTYNQ 272 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/357 (10%), Positives = 92/357 (25%), Gaps = 11/357 (3%) Query: 10 FKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVL--AATRVPLIIQQII 67 + L ++ N I + + A A P I Sbjct: 97 LTRVMTPLLGISTAL-AIMLFFFSNNIIPDFQKKAKNMLFNIAQTKPAINFTPGQFIDQI 155 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGI------FTVLVIN 121 P + + + N + + + Q G + + Sbjct: 156 PGYMVKFDKIYGENGENIEGVFVHKKANAYENQQSVVAEKGKFVPAANKNYLKLVLYNGY 215 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + G ++ Q+ D K + + + + I + Sbjct: 216 VFEDAFAGKGDNVRQKQPDQAIKFDTLVSHFDISEIINKAIEKEQITDDYRFQTYNQLDG 275 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 K D + + N + ++ K L+ + Sbjct: 276 TITKTKKDNKQFFDNIGSEVLNQTNSVITYMDKGNKHKVAPKTQIKLDTVKGEKKLEIIY 335 Query: 242 EQFASR-SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + ++ SN+ + + ++ + + LI +S+ R Sbjct: 336 NSYNRLDNLKSTLESKKNEYSSNVKYFSKVVIYQQRIVAYSVTCIIFFLIGSSLG-SIIR 394 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + V I + Y + +++ SG + P AA +P ++ + + + + Sbjct: 395 KGGMGLPVIIAIVIFIIFYVMNVGVENMSWSGKMNPYLAAWLPNLILLPFGVWMTYK 451 >gi|260910242|ref|ZP_05916919.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635746|gb|EEX53759.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 630 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 1/221 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + L + ++ + L +++ ++ A ++ Sbjct: 5 KKLDIFICKQFGMLFLGTFFICLFVLMMQFLWRYVDELVGK-GLTMEVLAQFFWWMALMM 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL+ +SEL ++ GIS+ + + VV L+ + + + N Sbjct: 64 VPQALPLAILLSSLITFGNLSESSELTAIKSAGISLTRTFSSLVVVCSLISVTSFVFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I L+ K + + + + + Sbjct: 124 IGPYSTIKLSQLLISMKQKSPELGIPEGVFYDGIPNSNIYVQKKDNQTGKFYGIMIYRMS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + ++II L K L + ++ + Sbjct: 184 NSYEDSEIILADSGMLQTTAERKHLLLTLWNGEWFSNQSQE 224 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 103/362 (28%), Gaps = 23/362 (6%) Query: 14 LKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLV 73 L T L+ L+ V N +G +S+ + + P + IP Sbjct: 99 LTRTFSSLVVVCSLISVTSFVFQ-NNIGPYSTIKLSQLLISMKQKSPELG---IPEGVFY 154 Query: 74 VNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLG--------------IFTVLV 119 I + + + GI I+++ N + I+L + T+ Sbjct: 155 DGIPNSNIYVQKKDNQTGKFYGIMIYRMSNSYEDSEIILADSGMLQTTAERKHLLLTLWN 214 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + +++G + ++ +K +I + N Sbjct: 215 GEWFSNQSQEVGKNAAAPFRRETFLEKKTLIDFNGDFNMTDAELFSGDARGKGLAKLYHD 274 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + I ++ Y + + K K + +++G K Sbjct: 275 LDSLQHNNDSIGRVFYNEVQASYYNASNMTKADSTAAMAEAKTKAFNVDSAFARLNGDGK 334 Query: 240 FSEQFASRS----FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS 295 +RS ++ + + + + + Y ++ L + I A + Sbjct: 335 RGVLSMARSQVEAVSADMEFKAMVTEDANRMIRQHKIEMYKKFLVSLSCLIFFFIGAPLG 394 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 R I V + + Y + + GI L+ ++ L++ + Sbjct: 395 -TIIRKGGLGIPVIVSVLVFIVYYILDNTGYQMARRGIWDVWFGELLATMVLTPLAVFVT 453 Query: 356 LQ 357 + Sbjct: 454 YK 455 >gi|71901308|ref|ZP_00683405.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71728928|gb|EAO31062.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 408 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 116/361 (32%), Gaps = 16/361 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ + L+ M++ L +I + + ++ R Sbjct: 48 MPK-LDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIAD-GHFPAKLLLSQLGLRFI 105 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P ++ ++ L R SE+ + +IG+ ++L + ++ + + + Sbjct: 106 SYLPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLALPVVVLIGVCS 165 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + DL++Q + + + + + + + + Sbjct: 166 LWLAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQS 225 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + + ++L+ N L + Sbjct: 226 QKDDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPTDGAALNYRVLTFARNDALLPEL 285 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S + A+ Q + + PL+ +A L+ +S R Sbjct: 286 SVVYDSNHPDILPTF-----NLIGDPRREAQAQLHARLAPPLLALAFALLVLPLSRSAPR 340 Query: 301 SNQPRIIVAYGIFSGFMLYT----IITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + F++Y ++ + + +G + PV + + +++ + Sbjct: 341 QQRYG-----AVMMCFLVYMVGTNLMIVGTQWIANGKISPVWGLWWLTLPLLLVAVWLYA 395 Query: 357 Q 357 + Sbjct: 396 R 396 >gi|93004884|ref|YP_579321.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] gi|92392562|gb|ABE73837.1| permease YjgP/YjgQ [Psychrobacter cryohalolentis K5] Length = 428 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 1/151 (0%) Query: 12 YYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFIT 71 TT L ++++ L + N I + +P ++ I+P Sbjct: 4 QVASTTALVLGFLVVMMLGGRLIRYFG-IAAEGNLDIGLLFTIIGYNLPYFLELILPLAF 62 Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 + ++VF L E+ + A G+S +L + L + + G + Sbjct: 63 FIALMLVFGRLYVDQEMAVINASGVSRGRLGRLMTPLILALFVGEAALSIVGKPWGVRSS 122 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQISNPQQDI 162 ++ QQ ++ N + Sbjct: 123 ENVWQQQALTSAFDLIRPNQFISSGNYHLYV 153 >gi|32491206|ref|NP_871460.1| hypothetical protein WGLp457 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166413|dbj|BAC24603.1| yjgQ [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 352 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 105/339 (30%), Gaps = 8/339 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M IL RY KTT+ L + + +I +E + + SI VP Sbjct: 1 MLFILDRYIRSLIFKTTIVALFILLTISGIIKFSEKIQSI-DNSYISIFYLISTILLSVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I++ L+ + L + EL+I + GIS ++ + I+ +++ Sbjct: 60 KDIEEFFNISILIGILWSIGILEKNRELIIIESSGISRIKICILIIKTIIIFLFIYSIIL 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 I +KI + K I I + F + I + Sbjct: 120 EWIIPIEKKIKSKYFFNFISENKKNLWIKINNNFILIKKIVDFDFIQGIYIYEFNKFNEI 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K I K+ + + K K + I Sbjct: 180 KYIKSSKYAIFKNKEWIMFDVKTIKFNNNK------KIEINSFDKQIYTNIITPKEINLI 233 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S E+ + F K+N+++ + + I P+ ++ +T+I + Sbjct: 234 LFPTEELSISELYFYIKFLKKNNLYYKKQYLVF-WNKIFSPISILIITIIILQLLFGILY 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 S +I V + I GF+ Y I I S Sbjct: 293 SYDIKIKVVFVISLGFIFYFINNIFNSLIMIYDYPEYFG 331 >gi|288800724|ref|ZP_06406181.1| putative permease [Prevotella sp. oral taxon 299 str. F0039] gi|288332185|gb|EFC70666.1| putative permease [Prevotella sp. oral taxon 299 str. F0039] Length = 636 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 86/277 (31%), Gaps = 5/277 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L + K + + ++ + L + + +I A Sbjct: 1 MFRIKKLDIFIVKQFGLLFIGTFFICQFVLMMQFLWRYIDDLIGK-GLTIDVLAQFFWYM 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +++ Q +P L+ +++ + NL +SEL +A GIS+ Q +V +IL+ + Sbjct: 60 GLMLVPQALPLAILLSSLIAYGNLGESSELTAIKAAGISLMQSCRGLIVITILIAFSSFY 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N I + LI +D + + + + + + Sbjct: 120 FQNNIGPTANLKLAQLILSMRDKSPETQIPVGVFYDGIPNSNIYVQKKDNETGKLYGIMI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + II L + K L + ++ + T N + Sbjct: 180 YRMTGSYEDQAIILADSGMLQSTADRKHLLLSLWSGEWFENMQSQEFT--NTAAVPYRRE 237 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY 275 F ++ F + S S + ++ Sbjct: 238 TFVDKKILIPFDDGFNLTDASLLSGSAKSKSMGAIWH 274 Score = 43.5 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 15/192 (7%), Positives = 45/192 (23%), Gaps = 2/192 (1%) Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 I + + K + + + + + ++ + Sbjct: 269 MGAIWHSLDSLNHYYDSVGNVNFKELSYLYNPVQVKTSRDSLRLETKRASLKQMFDVETD 328 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 + + R E+ S + Y I + L + Sbjct: 329 YNKLSSSQKQQVVSSALANIQRDISEL-DYRSMLTVDGDVAIRFHWIEAYNKITLALSCL 387 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 I A + R I + + Y + + GI + ++ Sbjct: 388 LFFFIGAPLGA-IIRKGGLGIPIIVSVLVFITYYILDNSGYRMAREGIWAIWFGKTLAMV 446 Query: 346 LTISLSILILLQ 357 + +++ + + Sbjct: 447 ILTPIAVFVTYK 458 >gi|120436531|ref|YP_862217.1| permease [Gramella forsetii KT0803] gi|117578681|emb|CAL67150.1| permease [Gramella forsetii KT0803] Length = 459 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 32/101 (31%), Gaps = 1/101 (0%) Query: 257 SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGF 316 K N+ + E + + + + + + A + R + + I Sbjct: 326 KQEFKRNVQQVNKFEIALHEKYALSIACIVLFFVGAPLGA-IIRKGGIGLPIVVAILLFL 384 Query: 317 MLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + I K+ + G + A + + + L I + + Sbjct: 385 TYHFIGIFAKNSAEDGSVPAFVATWLSTFIMLPLGIYLTYR 425 >gi|212690931|ref|ZP_03299059.1| hypothetical protein BACDOR_00419 [Bacteroides dorei DSM 17855] gi|237712585|ref|ZP_04543066.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726895|ref|ZP_04557376.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752264|ref|ZP_06088057.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212666163|gb|EEB26735.1| hypothetical protein BACDOR_00419 [Bacteroides dorei DSM 17855] gi|229435421|gb|EEO45498.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229453906|gb|EEO59627.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263237056|gb|EEZ22526.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 632 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 4/248 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + + L +++ +S A + Sbjct: 5 KKLDIFILKSFLMLFIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVLAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI + +++ P ++ L + N Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPLIIFCTFLCCTSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 IA + + L+ K + + + + Sbjct: 124 IAPKAQIKLLTLLVSMKQTSPELDIPEGVFYDEIEGYNIYVKQKDRETGMLKDVLIYNFS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II + + + + + + G + S T++ + F E Sbjct: 184 DGFENAHIIWASEGKMEMTADKQHLY---LHLYNGEQFENLKSQTISSNNVPYRRETFRE 240 Query: 243 QFASRSFY 250 + F Sbjct: 241 KHTIIEFD 248 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 33/110 (30%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S S+ + + E ++ I + + + I A + R + Sbjct: 345 SLASEWNMKSYQTTDADNNIRKHEADWHKKITLSISCLIFFFIGAPLGA-IIRKGGLGMP 403 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + Y I + KSG + V + I+ + + Sbjct: 404 VVVSVLIFVIYYIIDSGATRVAKSGEMNMVLGVWMSTIVLAPIGAFFTYK 453 >gi|254456522|ref|ZP_05069951.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] gi|207083524|gb|EDZ60950.1| putative permease, YjgP/YjgQ family [Candidatus Pelagibacter sp. HTCC7211] Length = 362 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 109/356 (30%), Gaps = 15/356 (4%) Query: 14 LKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLV 73 + L L+ A I+++V + M E S S + P II ++ PFI Sbjct: 1 MSFFLIALISAGIVIWVFQAVNFLDIMIE-DGRSYSVYISYSLLNFPKIINKLFPFILFF 59 Query: 74 VNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGID 133 V +EL+I GI+ QL+N S++L + ++ I + + Sbjct: 60 SLFYVTIKYENNNELIIFWNFGINKIQLINFIFKFSVILMLIQLIFSAIIVPKSQDLARS 119 Query: 134 LIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHR 193 ++ N + + +++ + + + Sbjct: 120 FLRSSTVNFYENFIKPKRFNDTIKNVTIFSERKDIDGNLYNLYLKKEINENNFQITYAKK 179 Query: 194 KDADLAIIYNDKVKLKK--VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE 251 V + + + I ++ S Y Sbjct: 180 GYFKEFNNLPVLVLFNGETITSKNNEITNFSFSKSDFPINNTETNSFVTQQKTQELSSYN 239 Query: 252 IIKKMSFSNKS------------NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++K + F + + + + Y +IP+ ++ +TLI V++ Sbjct: 240 LLKCVKFLIPTKKNKLDPKIINCSERNKDNIFKELYKRFIIPIYILVLTLIPLLVTILSK 299 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 ++ + G I+ ++ +L+P I I+L ++ L Sbjct: 300 EDSKYSRLKFIAFLIGLFFIIFSETTIRLISDSIIKNISISLLPFIFIITLYLIFL 355 >gi|294625211|ref|ZP_06703852.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600485|gb|EFF44581.1| YjgP/YjgQ family permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 360 Score = 57.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/363 (9%), Positives = 101/363 (27%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTADAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + ++L + + + Sbjct: 179 QQNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +S + Q + + PL+ +A L+ +S Sbjct: 239 TRVHDANDPEVMWTTQLLSDERPAA-------RAQLHERLAPPLLALAFALLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVW--TYA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|288929933|ref|ZP_06423775.1| putative permease [Prevotella sp. oral taxon 317 str. F0108] gi|288328752|gb|EFC67341.1| putative permease [Prevotella sp. oral taxon 317 str. F0108] Length = 630 Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 71/221 (32%), Gaps = 1/221 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + L + ++ + L +++ +I A ++ Sbjct: 5 KKLDIFICKQFGMLFLGTFFICLFVLMMQFLWRYVDELVGK-GLTIEVLAQFFWWMGLMM 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL ++ GIS+ + + VV S + + + N Sbjct: 64 VPQALPLAILLSSLITFGNLGESSELTAIKSAGISLTRTFSSLVVVSCFISATSFVFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I L+ K + + + + + + Sbjct: 124 IGPYSTIKLSQLLVSMKQKNPELEIPEGVFYDGIPNSNIYVQKKDVKTGKFYGIMIYRMS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK 223 + ++II L + L + ++ + Sbjct: 184 NSYEDSEIILADSGMLQTTAEKQHLLLTLWNGEWFSNQAQE 224 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 1/94 (1%) Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + + + Y V+ L + I A + R I V + + Y + Sbjct: 363 NRMIRQHKIEMYKKFVLSLSCLIFFFIGAPLG-TIIRKGGLGIPVIVSVLVFIVYYILDN 421 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + GI L+ ++ + L++ + + Sbjct: 422 SGYQMARRGIWAIWFGELLATMVLVPLAVFVTYK 455 >gi|294645356|ref|ZP_06723067.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|292639294|gb|EFF57601.1| putative membrane protein [Bacteroides ovatus SD CC 2a] Length = 616 Score = 57.4 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 338 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 396 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L I + + Sbjct: 397 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGIFLTYK 439 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 72/241 (29%), Gaps = 4/241 (1%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 + + + + L +++ +S A ++ +P L+ ++ Sbjct: 3 FIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTLVPVSLPLAVLLASL 61 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + F N EL+ +A GIS+ +++ P L + N + + LI Sbjct: 62 ITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKLGTLIL 121 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 K + + D + K + + D ++ + A Sbjct: 122 SMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIYSMKDGFEKARIIYA 178 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 D + K + G + + + ++ ++F E+ F + Sbjct: 179 DSGRLEMTADKQHLWLHLYSGDLFENLKAQSMKSENVPYRREEFREKHTIIEFNSDFNMV 238 Query: 257 S 257 Sbjct: 239 D 239 >gi|299141277|ref|ZP_07034414.1| permease [Prevotella oris C735] gi|298577237|gb|EFI49106.1| permease [Prevotella oris C735] Length = 632 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 66/220 (30%), Gaps = 1/220 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ + L + + S+ A ++ Sbjct: 5 KKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDDLIGK-GLSMEIMAKFFWYMGLML 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL +A GIS+ Q +V ++ + + + N Sbjct: 64 VPQALPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIVITLFVSGVSFVFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I L+ K + + + + + + Sbjct: 124 IGPEANNKIAQLLMSMKQKSPELEIPEGIFYDGIPNSNLYVQHKDLKTGKLYGIMIYRMT 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPID 222 + II L K + + ++ Sbjct: 184 GSYEDQAIILADSGMLQSTAEKKHLMLSLWSGEWFENMQT 223 Score = 43.1 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 27/95 (28%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + E + + L + I A + R I V + + Y + Sbjct: 361 GDRIIRQHEIEAISKFTVALSCLIFFFIGAPLGA-IIRKGGLGIPVIISVLVFIVYYILD 419 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +SGI + + L+I + + Sbjct: 420 NSGYRMSRSGIWTVWFGKGLAPAILTPLAIFVTYK 454 >gi|198283963|ref|YP_002220284.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248484|gb|ACH84077.1| permease YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 368 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 107/351 (30%), Gaps = 2/351 (0%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + + L L + ++ + L ++ Q+ +S L +P ++ ++P Sbjct: 3 VVRNLTISFLLTSLVVLAILAIGQLTQLLRQVAS-GQLPLSIILRLLGLALPTLLVMVLP 61 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 +VF NL R++E+V R+ G + LL P V + + +++ A + Sbjct: 62 LAFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLSWAPGAQ 121 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ-QDIFIGAKKILPENHIWEDFTSITIDKK 187 + + + + + + + + K + Sbjct: 122 RELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVAQGGQLD 181 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + A + L Y + + Q Sbjct: 182 MATAAYGEVKPAQDGALTLVLVDGQRYLGQPGKAGFKVLSFARYRVLLDNQDTGGAEPGG 241 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + + A ++ + ++ PL L + L+A ++ R Sbjct: 242 INWSSASLPQLVRQLHGTGMRFAVSELEWRLLWPLALPLLALLAIPLAYSEPRGGGRAAG 301 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + GI + I+ +K +G + L ++L ++++ ++ Sbjct: 302 MLVGILFLLAVNNIVVYVKEHMMNGSMPIFPGLLWVLLLILAVAAYAFFRR 352 >gi|281423648|ref|ZP_06254561.1| putative permease [Prevotella oris F0302] gi|281402200|gb|EFB33031.1| putative permease [Prevotella oris F0302] Length = 637 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 1/163 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ + L + + S+ A ++ Sbjct: 10 KKLDIFIAKQFGMLFVGTFFICQFVLMMQFLWRYIDDLIGK-GLSMEIMAKFFWYMGLML 68 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL +A GIS+ Q +V ++ + + + N Sbjct: 69 VPQALPLAILLSSLIAFGNLGESSELTAIKAAGISLMQAFRSLIVITLFVSGVSFVFQNN 128 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 I L+ K + + + Sbjct: 129 IGPEANNKIAQLLMSMKQKSPELEIPEGIFYDGIPNSNLYVQH 171 Score = 43.1 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 27/95 (28%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + E + + L + I A + R I V + + Y + Sbjct: 366 GDRIIRQHEIEAISKFTVALSCLIFFFIGAPLGA-IIRKGGLGIPVIISVLVFIVYYILD 424 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +SGI + + L+I + + Sbjct: 425 NSGYRMSRSGIWTVWFGKGLAPAILTPLAIFVTYK 459 >gi|51599060|ref|YP_073248.1| hypothetical protein BG0834 [Borrelia garinii PBi] gi|51573631|gb|AAU07656.1| hypothetical protein BG0834 [Borrelia garinii PBi] Length = 355 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 111/353 (31%), Gaps = 9/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + F K + T L L MIL+ + DL E N + +P Sbjct: 3 IDMLFVKSIILTFLSMNLLFMILIILGDLFVNLLSYLEK-NIGFKDILYIYYLYLPKAFS 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + L + NL+ +E++ + G+S+ ++L P ++ S+ + N + Sbjct: 62 DGVALSFLFAISNLIGNLSMRNEIIGLFSCGVSLTRILRPIILISLFISFVLFFFDNYLV 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 LI+ N II K + + + I Sbjct: 122 IDTVARRDLLIKNSIGNSRSSDKTIII-----RDLAREIYNIKSYDINENAFSNLMIIIK 176 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D K++ R D D A ++K +L + E+ I +N+ + + + + Sbjct: 177 DSKDEFQTRYDIDKAEWKDNKWRLYGIREFVKVGRKIKENAYDILDGTGIIKLEPDYIRT 236 Query: 245 ASRSFYEI-IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 S + K+ + + L+ + L++ +V + Sbjct: 237 VMLSSKALNFTKLINWISFLKSEHLNYSDALFDLLNRVFFSFRLILLSFTVGFIALALKK 296 Query: 304 PRIIVAY--GIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I++ I + I I G L A+ I + ++ + Sbjct: 297 NIFILSLLNSIAFAVVYVISIVIFNFLADLGYLHIYVASSFTTIFFLIINFFV 349 >gi|325919212|ref|ZP_08181261.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325550312|gb|EGD21117.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 360 Score = 57.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 38/361 (10%), Positives = 104/361 (28%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPILMLVVPVVVLIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAETMLEDANRSVLMAGLESGKFTPLSGGGVVYLTTISADGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R N ++L+ + + + Sbjct: 179 QKDDRIDVVTAERGAMFFEGKANRYLRLEDGYRIEGPAAGNTLDYRLMKFASNDVALPDR 238 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S+ + + + A Q + + PL+ +A L+ +S R Sbjct: 239 SQVHDANDPEVMWTT-----QLLSDERPAARAQLHERLAPPLLALAFALLTLPLSRSAPR 293 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + + + ++ + + +G + ++++I D Sbjct: 294 QQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAIWA--YARD 350 Query: 361 G 361 G Sbjct: 351 G 351 >gi|305667079|ref|YP_003863366.1| hypothetical protein FB2170_12551 [Maribacter sp. HTCC2170] gi|88708012|gb|EAR00250.1| hypothetical protein FB2170_12551 [Maribacter sp. HTCC2170] Length = 482 Score = 57.0 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 1/98 (1%) Query: 257 SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGF 316 ++ R + + L V + + A + R + + I Sbjct: 352 KKEFENRYEIYNRHIISLHKKYALALSCVILFFVGAPLGA-IIRKGGIGLPMVIAIVLFL 410 Query: 317 MLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 Y I +++ K + P+ A + ++ + LSI++ Sbjct: 411 TYYFIGVFAENYAKKNEIHPIIGAWLSTMIMLPLSIVL 448 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 66/229 (28%) Query: 26 ILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRT 85 + +F+ + I +P + ++++P L+ +I+ F L Sbjct: 1 MFIFIFQTIWLFIDDLAGKGLDIIIIGKFLFYLMPNLTEKVLPLTVLLSSILTFGTLAEN 60 Query: 86 SELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQ 145 E +A GIS+ + + +V + LG T N + + E+ +L + Sbjct: 61 YEFAAMKASGISLQRAMLSLIVFIVFLGGVTFYFANSVIPASEQKIYNLRRNIAKVKPAV 120 Query: 146 KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDK 205 + +I + K + + K K + ++ Sbjct: 121 AIVEGVFSDFEGADMNIKVDKKHGENDRFLENVTIHQKTKTKVNSTVIKAKSGELKSSET 180 Query: 206 VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIK 254 + ++V Y S+ F + E Sbjct: 181 SDILQLVLYDGHYYRDLPKSSKKAKNKHPFAKADFETYTMNIDLSEFNN 229 >gi|218672884|ref|ZP_03522553.1| putative permease protein [Rhizobium etli GR56] Length = 380 Score = 57.0 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 114/308 (37%), Gaps = 12/308 (3%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 L LL + +++ + + N + + SI A LA +P II ++PF ++ Sbjct: 3 FLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPSIIPVVLPFALVIAIT 61 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 +N SEL + A G L+ P ++ + ++ +F+ V N + + + +I Sbjct: 62 QTLTTMNNDSELTVIDAAGARRSILIRPILLLAAVISVFSFFVDNIVEPRAKTVARQMIA 121 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 + + + + +I + +++ K L + F + D ++I+ Sbjct: 122 ETYADLLSSVIEEKTFRKI---DEGLYVQISKRLAGRMLKGLFVADERDPAYELIYYAKE 178 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPI----DKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 + + ++ + +S + ++ + + + + + R + + Sbjct: 179 GAVDDTGTTLIMHDGEVHRKTPDGNVSVINFDSYSFDLSDMTENRGQATLKASDRDLWFL 238 Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII--VAY 310 ++K + + + ++ V L + +++ +RS++ + + Sbjct: 239 FNP-DPNDKDFTIRPQSYRAELHRRLTDWILPVVFALFSLAIA-GDARSHREARLHPMVS 296 Query: 311 GIFSGFML 318 + F Sbjct: 297 ALAYAFAF 304 >gi|218665831|ref|YP_002426599.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518044|gb|ACK78630.1| YjgP/YjgQ family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 373 Score = 57.0 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 107/351 (30%), Gaps = 2/351 (0%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 + + L L + ++ + L ++ Q+ +S L +P ++ ++P Sbjct: 8 VVRNLTISFLLTSLVVLAILAIGQLTQLLRQVAS-GQLPLSIILRLLGLALPTLLVMVLP 66 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 +VF NL R++E+V R+ G + LL P V + + +++ A + Sbjct: 67 LAFFFAVYLVFSNLYRSNEMVAIRSTGTGLSGLLPPVAVVAACVFCLELILSLSWAPGAQ 126 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ-QDIFIGAKKILPENHIWEDFTSITIDKK 187 + + + + + + + + K + Sbjct: 127 RELQSESVRLANAAAEAMLQPGSFTNLPGGRVIYVGQAVGKNSHRFQEIFLSVAQGGQLD 186 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + A + L Y + + Q Sbjct: 187 MATAAYGEVKPAQDGALTLVLVDGQRYLGQPGKAGFKVLSFARYRVLLDNQDTGGAEPGG 246 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + + A ++ + ++ PL L + L+A ++ R Sbjct: 247 INWSSASLPQLVRQLHGTGMRFAVSELEWRLLWPLALPLLALLAIPLAYSEPRGGGRAAG 306 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + GI + I+ +K +G + L ++L ++++ ++ Sbjct: 307 MLVGILFLLAVNNIVVYVKEHMMNGSMPIFPGLLWVLLLILAVAAYAFFRR 357 >gi|134095577|ref|YP_001100652.1| hypothetical protein HEAR2400 [Herminiimonas arsenicoxydans] gi|133739480|emb|CAL62531.1| putative permease [Herminiimonas arsenicoxydans] Length = 347 Score = 57.0 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 98/312 (31%), Gaps = 10/312 (3%) Query: 33 LNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISR 92 L I Q S L + I+ + ++V + SE+V+ Sbjct: 2 LIRILGQAAGGKVASA-DVVALIGFSALNYLPIILNLAGFMSVLLVVTRSYQDSEMVVWF 60 Query: 93 AIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 A G+S+ + + P +V ++ + + T L+ + + +++ + D + + Sbjct: 61 ASGLSLARWIPPVLVFALPIVVMTTLLSLFLTPWSNQQSAIYKERYANREDIARVSPGKF 120 Query: 153 MQISNPQQDIF-IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKV 211 + S+ + F G + + + ++ + + + + Sbjct: 121 QESSSSDRVFFVEGVAGDSSKVRNIFVSSVRNGKTSVVVAKEGTVEIDPAGDKFLVMHQG 180 Query: 212 VEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAE 271 Y D + + Q + + + +++ + + + Sbjct: 181 RRYDGVPTQSDFQLMEFDRYGVLVASQSQALVGDTSARALTTQELLRNRNN------FND 234 Query: 272 TQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS 331 + + + +PLM V + L+A + R + + +F +++ ++ Sbjct: 235 GELLWRVSLPLMGVLLMLLAIPLGFVNPRGGRSA-NLLIALFLFVFYSNMLSYAQAIVVQ 293 Query: 332 GILLPVAAALIP 343 A P Sbjct: 294 NR-AAFMMAWWP 304 >gi|289663727|ref|ZP_06485308.1| YjgP/YjgQ family permease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 360 Score = 57.0 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/363 (9%), Positives = 101/363 (27%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPKRMLRPMLMLVVPVVVVIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYMQTISADGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + ++L + + + Sbjct: 179 QQNDRINVVTADRGAMFFEGKTDRYLRLDDGYRTEGPAGGATLDYRLMKFASSDIALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +S + Q + + PL+ +A L+ +S Sbjct: 239 TRVHDANDPEVMWTTQLLSDERPTA-------RAQLHERLAPPLLALAFALLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWA--YA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|33519519|ref|NP_878351.1| putative inner membrane protein [Candidatus Blochmannia floridanus] gi|33517182|emb|CAD83564.1| putative inner membrane protein; predicted permease [Candidatus Blochmannia floridanus] Length = 370 Score = 57.0 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 119/351 (33%), Gaps = 3/351 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y K K L L+ ++ F ++ N I + +P + Sbjct: 2 ILIKYIMKEICKNQLIILILLLLACFCQKSIKVL---SLSNNIPIYWIFLYLFLSIPDLG 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + IIPF + ++ + L+ +E++ + ++ + L+ + S ++ I +++ + + Sbjct: 59 KLIIPFSLFLSVLISCYRLHMHNEILAMYSCAVNKYVLIQSICMYSTVIAILSLINLAYL 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 A E+ ++ + K N + + + + +FI K NH++ Sbjct: 119 APHCEQYKENIFFKMKKNTYFIELIEKKFYLLFDEHLVLFIDNIKNGMLNHVFILKRVQN 178 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 IDK I D + +++ + + + + Sbjct: 179 IDKNVFSIITADQGSIHYNFNDKSQLIILQSGMYYEIHNTQLLCIPRFVTYFNQYRTLVH 238 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ K + N + + + E+ + L + + ++ + + + Sbjct: 239 DKYQFLRDVNKSVKHMNINQLLISSELESYIELNWRLTLFISVFIMPMIALFVMMNIAYG 298 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + Y + ++ + + + I + + + +L+ Sbjct: 299 YLSNFLLAVVLYVFFYMLHIMLYTCSVLNYMNIIILMWIINCIYLIILLLM 349 >gi|295689676|ref|YP_003593369.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] gi|295431579|gb|ADG10751.1| permease YjgP/YjgQ family protein [Caulobacter segnis ATCC 21756] Length = 380 Score = 57.0 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 29/286 (10%), Positives = 83/286 (29%), Gaps = 5/286 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY F+ L TL + L + + + E S + +P Sbjct: 1 MRLIERYLFRQLLGPTLLATAALVALALLARSLSEFDVLVEQR-QSAVVFLKIILLALPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V +V L+ E+V+ A G+S W +++P + +++ + +++ Sbjct: 60 LLAIMMPLALFVAALVALNRLHTEQEIVVCFAGGMSRWAVISPAMRLAVMAALISLISGL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + K + + + + +++ Sbjct: 120 WLQPWSARQIRETAFDIKTDVASTLVQPGQFTEPGPGLTVYAQSINRDNKIQNLFIHQEM 179 Query: 182 ITIDKKNKIIHRKDADLAIIYN---DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQ 238 + + + Q + T ++ + Sbjct: 180 PNGGASTYSSREAEIATRKGQPVLIMRHGSNQQFSRQGVLQYTSFDEYTFDLSSLFRSDE 239 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML 284 + A R +E+ + + + + + PL Sbjct: 240 LLHYKIADRYPHELF-FPDMTQDWERQNRDKMLAEGHSRFAGPLYN 284 >gi|89070356|ref|ZP_01157663.1| Predicted permease [Oceanicola granulosus HTCC2516] gi|89044003|gb|EAR50178.1| Predicted permease [Oceanicola granulosus HTCC2516] Length = 370 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/348 (10%), Positives = 110/348 (31%), Gaps = 13/348 (3%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 +F L ++L +V + +Q+ S +A +P II+ ++P + + Sbjct: 4 FGFFSLVLILLYWVNRAVVLFDQLIS-DGQSALVFLEFSALSLPAIIRIVLPLAAFIAAL 62 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 V L SEL++ ++ G S +L P V +++ + T + + + Sbjct: 63 YVTNKLTTESELLVVQSTGFSPVRLARPAFVFGLIVTLLTGALTHVLVPVAAAQLGARQD 122 Query: 137 QWKDNGDKQKSDIIPWMQ------ISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 + N + ++ + + + + + I + Sbjct: 123 EIASNITARFLTPGQFLNPVDGITVYVRDINDAGALQDLFLADTRESGRQVIYTAATAYL 182 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFY 250 + + ++ + + + + + D + + I + + E+ Sbjct: 183 VRSEGGPQLVMVDGLAQTLRGSDQRLYTTRFDDFTYDIGRLIVSEEPGRLRERNVWSGPL 242 Query: 251 EIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY 310 + RAE + + + AA + FSR + Sbjct: 243 LQASPALQAQIERPAVALRAEVHDRMNKALLGFVGPVLGFAALLIGGFSRFG-VWRQIVV 301 Query: 311 GIFSGFMLYTIITIMKSFGKSG--ILLPVAAALIPVILTISLSILILL 356 + ++ ++ ++ + + + +P ++ ++++ + Sbjct: 302 AVVLVVVVTSLESVSSTLVDADPTRWPLL---YMPTLVGLAIASALFW 346 >gi|198276083|ref|ZP_03208614.1| hypothetical protein BACPLE_02270 [Bacteroides plebeius DSM 17135] gi|198270895|gb|EDY95165.1| hypothetical protein BACPLE_02270 [Bacteroides plebeius DSM 17135] Length = 630 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S S+ + + R ++ ++ I + L + I A + R + Sbjct: 346 SLMSDWSMKSYMTREADNNIRRHQSDWHKKITLSLACIIFFFIGAPLGA-IIRKGGLGMP 404 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + Y I + KSG + + + I+ L + + Sbjct: 405 VVISVLIFVLYYIIDSGATRVAKSGEMNIILGTWMSTIILAPLGGFLTYK 454 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 78/237 (32%), Gaps = 1/237 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + L +++ I+ A + Sbjct: 5 KKLDIFVLKSFLLLFSGTFFICLFIFMMQFLWRYVDELVGK-GLEINVLAQFFFLSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI +++++ P V+ + LG+ + N Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLFRIIRPVVLFCMFLGVMSFFFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I +K L+ K + + + + Sbjct: 124 IGPKAQKELWTLLVSMKQKSPEVDIPEGVFYSDIEGYNIYVKKKDRDTGILKDVLIYNFS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + II ++ L + + K + + ++ + N+P + + F++ Sbjct: 184 DGFENAHIIWAEEGKLELTADKKHLYLHLYNGEQFENLKSQSVISRNVPYRRETFKE 240 >gi|260174364|ref|ZP_05760776.1| hypothetical protein BacD2_21081 [Bacteroides sp. D2] Length = 616 Score = 56.6 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 1/103 (0%) Query: 255 KMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFS 314 F+ ++N + + +T+++ I I L + I A + R + V + Sbjct: 338 FKKFTMENNDYSIRKHKTEWHKKITISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVLV 396 Query: 315 GFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + + Sbjct: 397 FIIYYIIDNTGYKMARDGKWIVWMGMWTSSAVLAPLGVFLTYK 439 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 71/241 (29%), Gaps = 4/241 (1%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 + + + + L +++ +S A ++ +P L+ ++ Sbjct: 3 FIGTFFICLFIFMMQFLWRYVDELVGK-GLEMSVMAQFFFYSALTLVPVSLPLAVLLASL 61 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + F N EL+ +A GIS+ +++ P L + N + + LI Sbjct: 62 ITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVGVSFYFQNVVGPIAQAKLGTLIL 121 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 K + + D + K + + D + + H A Sbjct: 122 SMKQKSPELDIPEGVFYSEIK---DYNLKVAKKNRKTGMLYDVLIYNMKDGFENAHIIYA 178 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 D + K + G + + + +L + F E+ F + Sbjct: 179 DSGRLEMTADKQHLWLHLYSGDLFENLKAQSLKSQNVPYRRESFREKHTIIEFNSDFNMV 238 Query: 257 S 257 Sbjct: 239 D 239 >gi|166713424|ref|ZP_02244631.1| hypothetical protein Xoryp_18795 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 360 Score = 56.6 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 35/363 (9%), Positives = 101/363 (27%), Gaps = 14/363 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIG+ ++L P ++ + + + L Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPTRMLRPLLMLVVPVVVIIGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAEAMLEDANRSVLMAGLESGQFTPLSGGGVVYMQTISADGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + ++L + + + Sbjct: 179 QQNDRIDVVTADRGALFFEGKTDRYLRLDDGYRTEGPAGGATLDYRLMKFASSDIALPDR 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + +S + Q + + PL+ +A L+ +S Sbjct: 239 TRLHDGNDPEVMWTTQLLSDERPAA-------RAQLHERLAPPLLALAFALLTLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 R + + + + ++ + + +G + +++++ Sbjct: 292 PRQQRYG-RIMLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWA--YA 348 Query: 359 EDG 361 DG Sbjct: 349 RDG 351 >gi|312129693|ref|YP_003997033.1| permease yjgp/yjgq family protein [Leadbetterella byssophila DSM 17132] gi|311906239|gb|ADQ16680.1| permease YjgP/YjgQ family protein [Leadbetterella byssophila DSM 17132] Length = 453 Score = 56.6 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 84/276 (30%), Gaps = 2/276 (0%) Query: 82 LNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDN 141 + + ++ I ++ + S L+ V +S + ++ N Sbjct: 176 VYDHNTGSGNKNITVADSGRMYTINKESQLVFELYNGVNYSEGSSYNNMAQMTRYSFQKN 235 Query: 142 GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAII 201 + K I N + DK + I Sbjct: 236 KIVFLLSSFGLKRSKEEDFTYHEYMKSIPELNEKIDSLNKQIRDKSGQQIIAYKRLDLYA 295 Query: 202 YNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNK 261 + + V + +D T + + F + +I+ MSF N Sbjct: 296 FPEMVGDTLSKKGIVAGAWVDSLLTKVEKITSVQEFNSSARTKLESQKSQIVSDMSFLNG 355 Query: 262 SNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI 321 + A+ + + + +AM LI AS+ R + V I + Y + Sbjct: 356 V-EKAVWAADLERWNKVTTGFSCLAMFLIGASLGSIIKR-GGFGMPVLISIAFFILYYLL 413 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + K G++ V A +P + I++ L++ + Sbjct: 414 QQMGNKYAKEGLISAVVGAWMPFSVLITIGALLMRR 449 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 78/280 (27%), Gaps = 5/280 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I + F K Y+ + + + + L + N + A L Sbjct: 1 MKKI-DKLFVKSYIGPFVLTTAIVVFIFLMRFLMIYFPEFIGK-NLDMMVFAKLFFYFTM 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I +P TL+ ++ F NL SEL ++ GI I +L+ P ++ SI + IF++ Sbjct: 59 MTIPMSLPLATLLATLMCFGNLGEKSELTAMKSAGIPITRLIVPTMILSIFVAIFSIGYN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N + G L+ K + + + Sbjct: 119 NTVNPWANLKGWSLLYDIKTTKPALNIQEGIFYNQIPGYRIKVEKKVGDGQSLKNVIVYD 178 Query: 181 SITIDKKNKIIHRKDADLAIIYND---KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 T I + I + +L V Y G + T K Sbjct: 179 HNTGSGNKNITVADSGRMYTINKESQLVFELYNGVNYSEGSSYNNMAQMTRYSFQKNKIV 238 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 S RS E + + Sbjct: 239 FLLSSFGLKRSKEEDFTYHEYMKSIPELNEKIDSLNKQIR 278 >gi|300871686|ref|YP_003786559.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] gi|300689387|gb|ADK32058.1| permease YjgP/YjgQ family protein [Brachyspira pilosicoli 95/1000] Length = 431 Score = 56.6 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 80/243 (32%), Gaps = 3/243 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I +Y + + +L + FVI L ++ I + +P Sbjct: 1 MKKI-KKYIILEAIGPFIAGVLFFTFI-FVIQLLPELFKLILNNGAPIWTSLEIFVYMLP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + IP L+ I+ + L+ +E+++ RA+G S ++ P ++ +F++ Sbjct: 59 FNVAITIPMSILMAGIMGYGRLSSDNEIIVMRALGFSHMRIYAPIIILGFFTFLFSLFFN 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH-IWEDF 179 N + T L + + + IS+ I ++ + D Sbjct: 119 NVVMTESNYRYRALFSYIINIRPSIAVGKLEFAYISDINLSIGAYYSDNNGMSNVVIYDG 178 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 S + + A + L + + N T+ + ++ + Sbjct: 179 NSQARRIITAKSGKWKNNEANSKVITLTLYDGIVQEMPVYGFVSNDFTVFDAMDINIVRN 238 Query: 240 FSE 242 S+ Sbjct: 239 VSK 241 Score = 46.6 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 74/318 (23%), Gaps = 14/318 (4%) Query: 40 MGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW 99 + NY P I + F + + + + + I Sbjct: 121 VMTESNYRYRALFSYIINIRPSIAVGKLEFAYISDINLSIGAYYSDNNGMSNVVIYDGNS 180 Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ 159 Q + + + I + L + Sbjct: 181 QARR--------IITAKSGKWKNNEANSKVITLTLYDGIVQEMPVYGFVSNDFTVFDAMD 232 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI 219 +I K+ + + I KK + I Sbjct: 233 INIVRNVSKLNDHERGLREIPAWEIRKKINTSMNNSLQTLTNQISNMISTAYSNSFITNI 292 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 N N + F S + K ++ F+ I Sbjct: 293 DGTTNIILTNANVSFSSFSNTYVTTNSAELDRLYKSTKKEAVPYFYYVE-----FHKFIS 347 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 IP + M I A + + RS + + + Y +IT+ + + + A Sbjct: 348 IPAACLFMVFIGAPLGIVGKRSGR-GFGFGLSVIVVVVYYILITVAEIIAGNRKVPGFVA 406 Query: 340 ALIPVILTISLSILILLQ 357 P I+ + ++++ Sbjct: 407 MWFPNIVLAVIGGFLMIR 424 >gi|257461390|ref|ZP_05626486.1| ribonuclease PH [Campylobacter gracilis RM3268] gi|257441113|gb|EEV16260.1| ribonuclease PH [Campylobacter gracilis RM3268] Length = 343 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 93/319 (29%), Gaps = 13/319 (4%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY F ++ + I++ ++ ++ + S L +P I+ Sbjct: 6 RYLFSNFVGSFASLFSTLFIIMSIVFFL-QIARITSFIEINFSELVKLYLFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P V + F L++ +E ++ IG + +++ F + + L + + V + Sbjct: 65 VPIAFFVALSISLFRLSKENETIVIFTIGYATRKIVLFFGISAALCSLALLFVSLFMMPI 124 Query: 127 GEKIGIDLI--QQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E + + I ++ + + ++ D + + Sbjct: 125 AENLKDNFIDYKKISATLNIKSNEFGQKFSDWLVFIDSQENNGTSTLYKDLVLYNPGGSQ 184 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 D + I+ R + L Y G + Sbjct: 185 DHERMIVARSGEFKNENASFSAMLHDGKIYTMGGDQWHVSEFESLTLRTQSDRNIRGGGG 244 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + ++ R E Y L+ + + + ++ + Sbjct: 245 V----------IGYWSEMGGSEKRRKEFSIYTLVSLFPLASFLFALSLGIVTYRYEKGFV 294 Query: 305 RIIVAYGIFSGFMLYTIIT 323 + +FS F L +++ Sbjct: 295 YAGIFGVLFSYFALIMLLS 313 >gi|29840522|ref|NP_829628.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] gi|29834871|gb|AAP05506.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] Length = 357 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 119/352 (33%), Gaps = 10/352 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT + L + + + L EI + + + + L A ++P Sbjct: 1 MP-ILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAK--DVPYLTVLRLTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S + P ++ S + Sbjct: 58 YLLPFILPVSCFISAFALFRGLSDNNQITFLKASGASQGIITFPILMVSCAICCINFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + + AK Sbjct: 118 SELASICRFQTCKEIANMAMTSPTLLLQTLQKKENNRIFITVDHCAKSKFDNV-----II 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ DK+ + + + ND V+ + VV + + ++ + ++ + Sbjct: 173 ALKRDKEIANVGIIKTIIPDVANDTVEARDVVMISKLPSTLTEQHSSNSKEYYIETLDEM 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + M + ++ + + L +++ L+ +++ Sbjct: 233 LIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSHAHLPETLRRISIGLLCITLTYSGMV 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI--LLPVAAALIPVILTISL 350 + I + + I+ GK+ L +IP ++T + Sbjct: 293 LGTYKPRFRKSITLYCIFPVMDLILLIVGKNTTTLLPAFMMFIIPQVITWIV 344 >gi|21230125|ref|NP_636042.1| hypothetical protein XCC0650 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769884|ref|YP_244646.1| hypothetical protein XC_3584 [Xanthomonas campestris pv. campestris str. 8004] gi|21111655|gb|AAM39966.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575216|gb|AAY50626.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 360 Score = 56.2 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 39/361 (10%), Positives = 105/361 (29%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIGI ++L P + + + + Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGIGPRRMLRPILWLVVPVVVVIGACS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAELMLEDANRSVVMAGLESGKFTPLSGGGVVYLTTISPDGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + ++L+ + + L D Sbjct: 179 QKDDRIDVVTAERGAMFFEGKTDRYLRLEDGHRIEGPAGAQGLD-YRLMTFASNDVALPD 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + E++ + A + + + PL+ +A L+ +S R Sbjct: 238 RTKAHDANDPEVMSTFKLIGDA----RPIARAELHRRLAPPLLALAFALLTLPLSRSAPR 293 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + + + ++ + + +G + + +++SI D Sbjct: 294 QQRYG-RIMLAFLAYLVGTNLMIVGTQWIANGKVPGALGLWWLTLPLLAVSIWA--YARD 350 Query: 361 G 361 G Sbjct: 351 G 351 >gi|34581065|ref|ZP_00142545.1| hypothetical protein [Rickettsia sibirica 246] gi|28262450|gb|EAA25954.1| unknown [Rickettsia sibirica 246] Length = 338 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 121/341 (35%), Gaps = 11/341 (3%) Query: 24 AMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLN 83 +V++ + ++ + + L +P ++ ++P I ++ I ++ NL Sbjct: 1 MTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLPTLLFILLPVIMVITVIYIYNNLK 58 Query: 84 RTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGD 143 +L+I + G++ QL P + ++++ + + + I + K+N Sbjct: 59 VERQLIILQTSGVNNVQLALPALYVALIVMLLAYYISSNILPLSHINLKSRLNFIKNNYI 118 Query: 144 KQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDAD 197 + + + + ++ ++ ++ D S+ + ++ Sbjct: 119 SSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSP 178 Query: 198 LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + + V + +S + + + ++ + Y I + ++ Sbjct: 179 IFELNKGIRQEYDV---NGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKEANEYYISELLA 235 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + I + + + I+ PL + +A +V L + + + + Sbjct: 236 PPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYRKKTTFMPVLFSALTVL 295 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 L T I + S L + A +++ +++ + + ++K Sbjct: 296 LVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 336 >gi|160871958|ref|ZP_02062090.1| permease [Rickettsiella grylli] gi|159120757|gb|EDP46095.1| permease [Rickettsiella grylli] Length = 376 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 106/349 (30%), Gaps = 4/349 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL+RY + L + L +++ + NQ+ ++ + L P + Sbjct: 2 ILFRYLTREVLTSLLLITSLLFLILISNEFVHYLNQVA-YGKFAANILWKLIVLESPRFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++PF + + + L E+ + A G S+ QL + LL + + Sbjct: 61 AILLPFSLCLAILFTYGRLYADYEMTVLNACGFSLGQLTRLSLPFIFLLFFIVAGLSLWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + S L+ Q + Q + Q + + I++ + Sbjct: 121 SPSLLSYRNKLLTQTGIAIELQTLQPGRFQQTNQGHRIIYVEKVSTDHHTVKNIFLAQTS 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + ++ I A + + T + FQ + Sbjct: 181 PKEASQEITPWTILSAHRGYQTLNPHTKEPFFVAVNGKRYQGTPGQTEYYITAFQNYGIH 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR--- 300 K+ + S+ + + + ++ + L L+ + +++ SR Sbjct: 241 INLPRTTTHKKQDTLSSMALWNASPPHKACYFSELQWRLSAPLSILLLSLLAIPLSRVNP 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTIS 349 + V I + ++ + + + ++G + L I Sbjct: 301 RQGKFLHVLPVIGIYIVYLNLLLVGRDWIENGTISYTLGLWPIHGLLIL 349 >gi|163756953|ref|ZP_02164060.1| putative permease [Kordia algicida OT-1] gi|161323072|gb|EDP94414.1| putative permease [Kordia algicida OT-1] Length = 639 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 21/238 (8%), Positives = 69/238 (28%), Gaps = 10/238 (4%) Query: 129 KIGIDLIQQWKDNGDKQKSDIIPW-MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 D+ + + + + + I N + + ++ F ++ Sbjct: 190 NRYEDVKSNDPKSVLRMQHAKVSFDKYIMNVDLRDINKVDLDATDYNTYKMFNVKQLNDT 249 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + RK + + D + + + + ++ + + + Sbjct: 250 IALSERKYGQEKVGFGDNMYKRTGMVIIEKDSTNKVHQDSIIANKSITDILSLKNKKRAL 309 Query: 248 --SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP------LMLVAMTLIAASVSLEFS 299 S I +++ +N + + I + + + + + A + Sbjct: 310 DISITNIKGRITTLENTNNRFKRIEKKINHQKIYMHDKFAVAIACIILFFVGAPLGA-II 368 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + + I + + I K+ + G + P + ++ + LSI + Sbjct: 369 RKGGIGLPMVVAICLFLVYHFIGIFGKNSAEDGSIPPWLGTWLSTMIMLPLSIYFTRR 426 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 1/140 (0%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 M + + + ++ P +I ++P LV +I+ F Sbjct: 1 MCIFILQTVWLFIGELAGK-GLDAGVIFKFLLYTTPKLIPLVLPLSILVSSIMTFGRFAE 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 + E ++ GIS+ + + ++ ++LG+ T N + E +L + Sbjct: 60 SYEFAAMKSTGISLQRAMRSLIIFIVILGVGTFFFSNSVIPWSEFKQYNLRKNLAKKKPA 119 Query: 145 QKSDIIPWMQISNPQQDIFI 164 + I N + Sbjct: 120 LAIGEGVFNDIGNINIKVDN 139 >gi|167752154|ref|ZP_02424281.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] gi|167660395|gb|EDS04525.1| hypothetical protein ALIPUT_00396 [Alistipes putredinis DSM 17216] Length = 492 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 43/123 (34%), Gaps = 1/123 (0%) Query: 235 DGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 A+R+ + K+ + YR++ +++ + +P+ ++ LI A + Sbjct: 334 KDRIWSQAVSAARNSRSMFSFDESQAKNALNQLYRSKVEWHKKLALPVTIIIFFLIGAPL 393 Query: 295 SLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + + + Y I + + K G + + ++I + Sbjct: 394 GA-IVRRGGLGMPIVISVIFFVIYYIISSSGEKMAKEGTWEAFYGTWLSAFVLAPVAIYL 452 Query: 355 LLQ 357 + Sbjct: 453 TYK 455 Score = 52.8 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 27/279 (9%), Positives = 79/279 (28%), Gaps = 1/279 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +++ K YL + M ++ + L +++ L Sbjct: 1 MKTIYKLVLKSYLGPMVLTFFIIMFVLMMNVLWRYIDELVGK-GLDPGTIIELLCYATIN 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I +P TL+ I+ NL EL+ ++ G+S+ +++ P +V +L + + + N Sbjct: 60 MIPMALPLATLLAAIMTMGNLGENYELLAMKSAGMSLPKIMRPLLVVVSILAVGSFFIAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + K I + + + + + + + Sbjct: 120 NLVPYANKKFFRTIYDIRQMNQTLEFQDGLFFNGIDGMSIRVGHQNQETGLLTDVLIYDN 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + + + + + ++ + F+ Sbjct: 180 RNASGNMTTTVADSGYIRLSDDKRFLEITLFNGERYEQTRNSSQWYNKSSLQRNKFELQK 239 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 + F N + + + + L Sbjct: 240 ANISISGFEMQRTDADLFNNAQTKNISELQYEIDTLTQQ 278 >gi|126664027|ref|ZP_01735021.1| hypothetical protein FBBAL38_12830 [Flavobacteria bacterium BAL38] gi|126623976|gb|EAZ94670.1| hypothetical protein FBBAL38_12830 [Flavobacteria bacterium BAL38] Length = 474 Score = 56.2 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 20/211 (9%), Positives = 57/211 (27%), Gaps = 4/211 (1%) Query: 14 LKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLV 73 + T + + + + ++ + + P I+ ++P L+ Sbjct: 1 MITFTTVFVILFFIFVLQGIWLFIAELAGK-DLDLFTIFKFLTFYAPTIVPMVLPLSVLL 59 Query: 74 VNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGID 133 I+ F + E ++ GIS+ + + + +L + + N + + I+ Sbjct: 60 AAIMTFGSFAENYEFAAMKSSGISLQRAMKMLTITIGILALVSFFFANNVIPDAQFRFIN 119 Query: 134 LIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHR 193 L + + I + KK E T + + Sbjct: 120 LRKDIVQQKPAMAIVEGQFNTIGTSNIKVD---KKTGDNGEFLEGVTMHVKNNNMGLGAN 176 Query: 194 KDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 ++ + ++ Sbjct: 177 TIIKAKRGVLTSQDDSNYLQLELYDGYYYED 207 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 2/135 (1%) Query: 223 KNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPL 282 KN +L P ++ + ++ A+ S + I + + + VI Sbjct: 310 KNIESLFNPTELKQILEMAKSNATSSEFSIQSSKTDLEIKA-KNIGYHWMAIHEKFVIAY 368 Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + M I A + R + + + + + I T + + + P A + Sbjct: 369 ACLLMFFIGAPLGA-IIRKGGLGLPIVFAMLIFIAFHFINTFGRKLAEESTITPFIGAWM 427 Query: 343 PVILTISLSILILLQ 357 I+ +IL+ + Sbjct: 428 SSIIMTPFAILLTYR 442 >gi|89898056|ref|YP_515166.1| hypothetical protein CF0249 [Chlamydophila felis Fe/C-56] gi|89331428|dbj|BAE81021.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 357 Score = 55.9 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 118/360 (32%), Gaps = 9/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT + L + + + L EI + + + + L A ++P Sbjct: 1 MP-ILWKVLIFRYLKTITFCTLSLICISIISSLQEIVSYIAK--DVPYPTVLRLTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S ++ P ++ S + Sbjct: 58 YLLPFILPISCFISAFTLFRGLSDNNQITFLKASGASHGIIIFPALMVSCAICCINFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + + AK Sbjct: 118 SELASICRFQTCKEIANMAMTSPTLLLQTLQKKENNRIFITVDHCAKSKFDNV-----II 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ D++ + + + ND V+ K VV + ++ + ++ + Sbjct: 173 ALKRDQEIANVGIIKTIIPDVANDTVQAKNVVMISKLPSTLTDQHSSNSQEYYIESLNEM 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + M + ++ + + L + + L+ +++ Sbjct: 233 LIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSHAHLPETLRRIGIGLLCITLTYSGMV 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKS-GILLPVAAALIPVILTISLSILILLQKE 359 + I + + I+ GK+ L P I + + I +E Sbjct: 293 LGTYKPRFRKPIILYCVFPVMDLILLIVGKNTNSLFPALMLFIVPQVISWIVFAIRAYRE 352 >gi|167646492|ref|YP_001684155.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] gi|167348922|gb|ABZ71657.1| permease YjgP/YjgQ family protein [Caulobacter sp. K31] Length = 378 Score = 55.9 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 66/182 (36%), Gaps = 1/182 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ RY F+ L TL L + L + + + E S + A +P Sbjct: 1 MRLIERYLFRQLLGPTLLATLALVALALLARSLSEFDVLIEQR-QSAMVFLKIIALALPQ 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I+P V +V L+ E+V+ A G+S W++++P + ++L + ++ + Sbjct: 60 LLSVILPIALFVAALVALNRLHTEQEIVVCFAGGMSRWRVISPAMRLAVLATLISLAMSL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 +A + + K + + + + ++++ Sbjct: 120 WVAPWSSRAIRETFFDMKSDLASTLVRPGEFTEPGPGLTVYAQVIDRDQIIHNVFIHQEK 179 Query: 182 IT 183 Sbjct: 180 PN 181 >gi|157829182|ref|YP_001495424.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801663|gb|ABV76916.1| hypothetical protein A1G_07385 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 338 Score = 55.9 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 123/341 (36%), Gaps = 11/341 (3%) Query: 24 AMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLN 83 +V++ + ++ + + L +P ++ ++P I ++ I ++ NL Sbjct: 1 MTSIVWITQILKLLYLFDK--GIKVMDFFSLIVLVLPTLLFILLPVIMVITVIYIYNNLK 58 Query: 84 RTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGD 143 +L+I +A G++ QL P + ++++ + + + I + K+N Sbjct: 59 VERQLIILQASGVNNVQLALPALYVALIVMLLAYYISSTILPLSHINLKSRLNFIKNNYI 118 Query: 144 KQKSDIIPW------MQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDAD 197 + + + + ++ ++ ++ D S+ + ++ Sbjct: 119 SSMIEEKTFNKVTKDITVFIDKKSAGNIMNGVIIFDNRNADNPSVVFAGSGTLNIYDNSP 178 Query: 198 LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + + V + +S + + + ++ + Y I + ++ Sbjct: 179 IFELNKGIRQEYDV---NGNLTQLTFDSLMIKLQNDNPLVSQRTKHNKEANEYYISELLA 235 Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + I + + + I+ PL + +A +V L + S + + + Sbjct: 236 PPHDLAITKKIKLIAEAHQRIIWPLYNFVLPFVALAVFLRYPYSKKTTFMPVLFSALTVL 295 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 L T I + S L + A +++ +++ + + ++K Sbjct: 296 LVTSIHFILQNFASKNLDFIFACYFNLVIALTIGLYLFVRK 336 >gi|189461471|ref|ZP_03010256.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] gi|189431805|gb|EDV00790.1| hypothetical protein BACCOP_02127 [Bacteroides coprocola DSM 17136] Length = 635 Score = 55.9 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 80/252 (31%), Gaps = 1/252 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + L +++ I+ A + Sbjct: 5 KKLDIFVLKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGK-GLEINVLAQFFFYSGLTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI + +++ P V+ + LG + N Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIIRPVVLFCVFLGGISFFFQNI 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I +K L+ K + + + + + Sbjct: 124 IGPRAQKQLWTLLVSMKQKSPEVDIPEGVFYSDIDGYNIYVKHKDRKTGLLKDILIYNFS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + II + L + + + + + ++ + N+P + + F++ Sbjct: 184 DGFENAHIIWAAEGKLELTADKQHLFLHLYNGEQFENLKSQSVISRNVPYRRETFKEKHT 243 Query: 243 QFASRSFYEIIK 254 S + ++ Sbjct: 244 LIQFSSEFNMVD 255 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 1/147 (0%) Query: 211 VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 V I+ +S ++ + + + +S SF K Sbjct: 309 VKIKTENIAVINTDSIYNSMTSQEKLKVLTTTENRVKSLSTDWDMKSFLTKDTDNSIRSH 368 Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 + ++ I + L + I A + R + V + + Y I + K Sbjct: 369 RSDWHKKITLSLACIIFFFIGAPLGA-IIRKGGLGMPVVISVLIFVIYYIIDSGATRVAK 427 Query: 331 SGILLPVAAALIPVILTISLSILILLQ 357 SG + V + I+ L + Sbjct: 428 SGEMNIVLGTWMSTIVLAPLGAFFTYK 454 >gi|188993099|ref|YP_001905109.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris str. B100] gi|167734859|emb|CAP53070.1| Predicted YjgP/YjgQ family permease [Xanthomonas campestris pv. campestris] Length = 360 Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 39/361 (10%), Positives = 105/361 (29%), Gaps = 10/361 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ L L+ +++ L +I + + + Sbjct: 1 MPK-LDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIAD-GRIPARLLLSQVGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + I+P ++ ++ L R SE+ + AIGI ++L P + + + + Sbjct: 59 AYLPIILPLALMLGLLLALARLYRDSEMAVITAIGIGPRRMLRPILWLVVPVVVVIGACS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + +++ + + + +S Sbjct: 119 LWLGPWASRTAELMLEDANRSVVMAGLESGKFTPLSGGGVVYLTTISPDGKGLGKVFMQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + ++L+ + + L D Sbjct: 179 QKDDRIDVVTAERGAMFFEGKTDRYLRLEDGHRIEGPAGAQGLD-YRLMTFASNDVALPD 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + E++ + A + + + PL+ +A L+ +S R Sbjct: 238 RTKAHDANDPEVMSTFKLIGDA----RPIARAELHRRLAPPLLALAFALLTLPLSRSAPR 293 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + + + + ++ + + +G + + +++SI D Sbjct: 294 QQRYG-RIMLAFLAYLVGTNLMIVGTQWIANGKVPGAVGLWWLTLPLLAVSIWA--YARD 350 Query: 361 G 361 G Sbjct: 351 G 351 >gi|282880145|ref|ZP_06288865.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] gi|281306018|gb|EFA98058.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1] Length = 635 Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 65/222 (29%), Gaps = 1/222 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + ++ + L + + S+ A + Sbjct: 5 KKLDIFTAKQFGLLFAGTFFICQFVLMMQFLWRYVDDLIGK-GLSMEIMAQFFWYMGLFL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL SEL ++ GIS+++ P + +I + + N Sbjct: 64 VPQALPLAVLLSSLITFGNLGENSELTAIKSSGISMFRTFQPLISLTIFISFSSFYFQNY 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + LI K + + + + + + Sbjct: 124 VGPKANMKLAQLILSMKQKSPELEIPEGIFYDGIPNSNLYVQKKDVETGKLYGIMIYRMT 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + II L + K L + ++ + Sbjct: 184 GSYEDQAIILADSGMLQSTADKKHLLLSLWSGEWFENMQSQE 225 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 23/95 (24%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + + L + I A + R + + + Y Sbjct: 363 GDKMLREHRIEMIGKFTLALTCLIFFFIGAPLGA-IIRKGGLGFPIIISVLVFIIYYIFE 421 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +SGI + + I L+ + + Sbjct: 422 NTGYRMARSGIWTVNFGKGLAPAVLIPLAAFVTYK 456 >gi|126663512|ref|ZP_01734509.1| hypothetical protein FBBAL38_09189 [Flavobacteria bacterium BAL38] gi|126624460|gb|EAZ95151.1| hypothetical protein FBBAL38_09189 [Flavobacteria bacterium BAL38] Length = 156 Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 1/150 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ +Y K YL T L+ + + ID++E N+M E ++ V Sbjct: 1 MKIIDKYILKRYLVTFSVMLIMFIPIGITIDVSEKVNKMIEKK-IPLTDILVYYGDFTVY 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + P + I L +E++ + GIS + L PF+ G++++ IF +L+ Sbjct: 60 FANLLFPIFLFLSIIWFTSKLANNTEIIAILSSGISFARFLRPFIYGAVIVSIFALLMGF 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIP 151 + K D Q + + Sbjct: 120 FLIPQASKGFNDFRYQNLKGNSQTRETSDI 149 >gi|315638467|ref|ZP_07893644.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis JV21] gi|315481458|gb|EFU72085.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis JV21] Length = 341 Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 101/323 (31%), Gaps = 13/323 (4%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++++Y +L T L L +V ++ + S L +P Sbjct: 1 MKLIFKYILNQFLGTHLSIFLVLFGIVSMVFFI-QIANLTSSIEISFLDLFKLYGFMLPR 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ +P V + + L++ +E V+ +G + ++ F+ + L + + V Sbjct: 60 ILIFTLPLAFFVALTLALYRLSKENESVVFFTLGFTPLKMAQFFLKIATFLSVLMLGVAL 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + ++ Q + N K I + + F+ + + Sbjct: 120 VMIP--------IVYQLQKNFVDYKKTQIKFNYKTGEFGQKFLDWMIFIQDEKEGGYENI 171 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I K+ ++ +A N + + + ++ + + + Sbjct: 172 IMYHPKSTDNLKEQLIIAKEANLERSNEGFAFRLSAGKMYNFDADEALFIGEFENLVVNT 231 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + K + +I N +F + I L +A TL A S + R Sbjct: 232 KFSDNLG----QTKAFYEYWDDINTNADKAREFVMYVCISLFPLASTLFALSFGIVTYRY 287 Query: 302 NQPRIIVAYGIFSGFMLYTIITI 324 + I + + ++ Sbjct: 288 EKGFIYLGMFGVIAVYFGLLSSL 310 >gi|15836744|ref|NP_297432.1| hypothetical protein XF0139 [Xylella fastidiosa 9a5c] gi|9104925|gb|AAF82952.1|AE003867_6 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 361 Score = 55.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/363 (10%), Positives = 111/363 (30%), Gaps = 20/363 (5%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ + L+ M++ L +I + + ++ R Sbjct: 1 MPK-LDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIAD-GHFPAKLLLSQLGLRFI 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P ++ ++ L R SE+ + +IG+ ++L + + + + + Sbjct: 59 SYLPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + DL++Q + + + + + + + + Sbjct: 119 LWLAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQS 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS--TTLNIPIKMDGFQ 238 R + + ++L+ N T + Sbjct: 179 QKDGRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPAL 238 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEF 298 + A+ Q + + PL+ +A L+ +S Sbjct: 239 SVVYDSNHPDILPTFNLIGD-------PRREAQAQLHARLAPPLLALAFALLVLPLSRSA 291 Query: 299 SRSNQPRIIVAYGIFSGFMLYT----IITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 R + + F++Y ++ + + +G + V + + +++ + Sbjct: 292 PRQQRYG-----AVMMCFLVYMVGTNLMIVGTQWIANGKISAVWGLWWLTLPLLLVAVWL 346 Query: 355 LLQ 357 + Sbjct: 347 YAR 349 >gi|300728391|ref|ZP_07061753.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] gi|299774310|gb|EFI70940.1| permease, YjgP/YjgQ family [Prevotella bryantii B14] Length = 631 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 66/222 (29%), Gaps = 1/222 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + ++ + L + + ++ A ++ Sbjct: 5 KKLDIFLAKQFGLLFAGTFFICQFVLMMQFLWRYVDDLIGK-GIPMTALAQFFWYMGLMM 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ NL +SEL +A GIS+ Q L +V + ++ + + N Sbjct: 64 VPQALPLAILLSSLITLGNLGESSELTAIKAAGISLLQALRSLIVITCIIMMASFYFENN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + L+ K + + + + + + Sbjct: 124 LGPDANMKLSQLLISMKQKSPELEIPEGVFYDGIPNSNIYVQKKDLKSGKLYGIMIYRMT 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + II + K + K+ ++ Sbjct: 184 QSYEDAAIILADSGMMQSTAEKKHLILKLWSGEWFENMRSDE 225 Score = 45.1 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 29/104 (27%), Gaps = 1/104 (0%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + S + R + + + L + I A + R + V + Sbjct: 354 EFKSLLTSDGDKNIRRHKIEMVNKFTVALSCLIFFFIGAPLGA-IIRKGGLGVPVIISVL 412 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y + + GI + + ++I + + Sbjct: 413 VFIIYYILDNSGFRMAREGIWAIWFGKGLAPGVLTPIAIFVTYK 456 >gi|8925955|gb|AAF81687.1|AF233069_10 unknown [Galdieria sulphuraria] Length = 142 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 53/141 (37%), Gaps = 1/141 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I+ RY + + + + + + + + + + P Sbjct: 1 MFTIIDRYILQLLIGPFVISSSAFTSITLSVGVLFELVR-RVVEGLPFKIAGKILLYKSP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I P +L ++ F L EL+ R++GIS ++ L ++ L+ I + + Sbjct: 60 YFIFLSFPLASLFATLITFNQLANNKELIGFRSLGISNYKWLRSTIIFGTLIAISSFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDN 141 + I +L+++ K+N Sbjct: 120 DLIVPVSNHRANELLRESKEN 140 >gi|160887737|ref|ZP_02068740.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|317478670|ref|ZP_07937825.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] gi|156862768|gb|EDO56199.1| hypothetical protein BACUNI_00139 [Bacteroides uniformis ATCC 8492] gi|316905181|gb|EFV26980.1| hypothetical protein HMPREF1007_00941 [Bacteroides sp. 4_1_36] Length = 633 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 79/270 (29%), Gaps = 4/270 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + + + + L ++M ++ A + Sbjct: 5 KKLDIFVLKSFCMLFMGTFFICLFIFMMQFLWRYVDEMVGK-GLEMTVLAQFFFYSALSL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ ++ F N EL+ +A GIS+ +++ P ++ + + N Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPKAQTKLWTLLISMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNR---KTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +K + +D + K + G + S +N + F E Sbjct: 181 NFEKGFENAQIIKSDSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQRNVPYRRETFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + A F + SN ++ Sbjct: 241 KHAIIEFNSDFNMVDAGIMSNQSNSKDMRM 270 Score = 39.3 bits (89), Expect = 0.89, Method: Composition-based stats. Identities = 24/240 (10%), Positives = 62/240 (25%), Gaps = 9/240 (3%) Query: 118 LVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 + + + + N D D +SN + + ++ + Sbjct: 225 NMNQRNVPYRRETFREKHAIIEFNSDFNMVDAGI---MSNQSNSKDMRMLQADIDSMKLQ 281 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + K + ++ D +K++K + +S + Sbjct: 282 NDSVGRGYYKEAMAGTYKVTASLSKEDTLKIEKA-----YLGEYNVDSLYNVATLMQKQK 336 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S SF+ R T ++ + + L + I A + Sbjct: 337 VISTAVSRAESAGSDWSFKSFNISQTESSLRRHMTSWHEKLTLSLACLIFFFIGAPLG-G 395 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + V + + Y I + G + + L + + Sbjct: 396 IIRKGGLGMPVVVSVLIFIIYYIINNTGYKMARDGQWVVWMGMWTSTAVLAPLGAFLTYK 455 >gi|254468135|ref|ZP_05081541.1| permease YjgP/YjgQ [beta proteobacterium KB13] gi|207086945|gb|EDZ64228.1| permease YjgP/YjgQ [beta proteobacterium KB13] Length = 368 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 111/344 (32%), Gaps = 6/344 (1%) Query: 12 YYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFIT 71 +L +L +V + + + + + ++ Sbjct: 10 ELFYNSLSTILILSGIVVAQRGVVVFR-LASKGIIPNDSILTILVFSLIKYLPILLTLTL 68 Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 + ++ R SE++I + G+ + + P + S+ + + + ++ + Sbjct: 69 FLTILLTLSRWFRDSEMMIWFSSGLGLTSFIRPILFFSLPIILLIGFLSLYLSPWATQKS 128 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKII 191 + K+ + + + + + ++ L S K I+ Sbjct: 129 EEYKAGLKNRDELATISPGSFKESKSKDRVFYVEGFGDLGSKVKNVFVQSEQNGKLGIIV 188 Query: 192 HRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE 251 + + ++ + + +Y + N T + ++ + E Sbjct: 189 SNEGSRVSTSTDKDEYIVLKKGKRYEVNHENNNFTEIKFNDYGFLVERKLPPIIDVNQVE 248 Query: 252 IIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYG 311 + + + R +F + + +PL + + ++A +S RS + I+ Sbjct: 249 AMPTALLL----LTNTNREIAEFVWRVSLPLSGIVLIILAIPLSFINPRSGRSANIIIA- 303 Query: 312 IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I + ++ + +S+ G L P I +L IS++ ++ Sbjct: 304 IMIFAIYNNLMGVTQSYINLGKLNPYVGGAIVHVLIISIASYLM 347 >gi|71275899|ref|ZP_00652182.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|71899263|ref|ZP_00681425.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] gi|71163276|gb|EAO12995.1| permease YjgP/YjgQ [Xylella fastidiosa Dixon] gi|71730996|gb|EAO33065.1| permease YjgP/YjgQ [Xylella fastidiosa Ann-1] Length = 408 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 115/361 (31%), Gaps = 16/361 (4%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + ++ + L+ M++ L +I + + ++ R Sbjct: 48 MPK-LDRYLLSDFTQSFIATLIVLMLVGVGGVLVDILGSIAD-GHFPAKLLLSQLGLRFI 105 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++P ++ ++ L R SE+ + +IG+ ++L + + + + + Sbjct: 106 SYLPLLLPLALMLGLLLSLGRLYRDSEMAVITSIGVGPGRMLPSILGLVLPVVVLIGVCS 165 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +A + DL++Q + + + + + + + + Sbjct: 166 LWLAPWANRTANDLLEQANRSIIMAGLEAGTFTPMPDGGVVYLSSLSSDGTKLNAVFMQS 225 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 R + + ++L+ N L + Sbjct: 226 QKDDRIAVVTAKRGEMYVQGDKGRYLRLEDGQRVDGPADGAALNYRVLTFARNDALLPEL 285 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 S + S + A+ Q + + PL+ +A L+ +S R Sbjct: 286 SVVYDSNHPDILPTF-----NLIGDPRREAQAQLHARLAPPLLALAFALLVLPLSRSAPR 340 Query: 301 SNQPRIIVAYGIFSGFMLYT----IITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + + F++Y ++ + + +G + PV + + +++ + Sbjct: 341 QQRYG-----AVMMCFLVYMVGTNLMIVGTQWIANGKISPVWGLWWLTLPLLLVAVWLYA 395 Query: 357 Q 357 + Sbjct: 396 R 396 >gi|57242354|ref|ZP_00370293.1| conserved hypothetical integral membrane protein, putative [Campylobacter upsaliensis RM3195] gi|57017034|gb|EAL53816.1| conserved hypothetical integral membrane protein, putative [Campylobacter upsaliensis RM3195] Length = 351 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 13/322 (4%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 ++++Y +L T L L +V ++ + S L +P I Sbjct: 12 KLIFKYILNQFLGTHLSIFLVLFGIVSMVFFI-QIANLTSSIEISFLDLFKLYGFMLPRI 70 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P V + + L++ +E V+ +G + ++ F+ + L + + V Sbjct: 71 LIFTLPLAFFVALTLALYRLSKENESVVFFTLGFTPLKMAQFFLKIATFLSVLMLGVALV 130 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + ++ + + +K K + Q K+ EN I S Sbjct: 131 MIPIVYQLQKNFV-DYKKTQIKFNYKTGEFGQKFLDWMIFIQDEKEGGYENIIMYHPKST 189 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 K+ II ++ +L + Y + N+ + + Sbjct: 190 DNLKEQLIIAKEANLERSNEGFAFRLNEGKMYNFDGGEALFIGEFENLVVNTKFSDNLGQ 249 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 A +++ I N +F + I L +A TL A S + R Sbjct: 250 TKAFYEYWDDIN-----------TNADKAREFVMYVCISLFPLASTLFALSFGIVTYRYE 298 Query: 303 QPRIIVAYGIFSGFMLYTIITI 324 + I + + ++ Sbjct: 299 KGFIYLGMFGVIAVYFGLLSSL 320 >gi|281422565|ref|ZP_06253564.1| putative permease [Prevotella copri DSM 18205] gi|281403389|gb|EFB34069.1| putative permease [Prevotella copri DSM 18205] Length = 632 Score = 55.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 1/151 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ + L +++ ++ A ++ Sbjct: 5 KKLDIFIAKQFGLLFMGTFFICQFVLMMQFLWRYIDELIGK-GLTMDVMAQFFWYMGLML 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL +A GIS+ Q +V +I++ + N Sbjct: 64 VPQALPLAILLSSLMTFGNLGESSELTAIKAAGISLMQAFRSLIVITIIIMFGSFYFQNN 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWM 153 + L+ K + + + Sbjct: 124 VGPKSNMKLAQLLISMKQKSPELEIPEGIFY 154 Score = 42.8 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 9/94 (9%), Positives = 27/94 (28%), Gaps = 1/94 (1%) Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + + + + + L + I A + R V + + + + Sbjct: 363 DYMIRQHKIEAINKFTLALSCLIFFFIGAPLGA-IIRKGGLGFPVVISVLVFIVFFILDN 421 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +SG+ + + L+I + + Sbjct: 422 TGYRMSRSGMWAIWFGKGLAPAVLTPLAIFVTYK 455 >gi|282892297|ref|ZP_06300693.1| hypothetical protein pah_c221o031 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497888|gb|EFB40239.1| hypothetical protein pah_c221o031 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 359 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 117/361 (32%), Gaps = 25/361 (6%) Query: 22 LGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFN 81 + + ++ +EI + + S +++P I+ +IP +L+ ++++ Sbjct: 1 MAFVAILLTTRFDEIAHFAA--LGAAGSHIIWFIVSQIPYILPIVIPISSLIASLLLIQR 58 Query: 82 LNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKD- 140 L++T EL RA G +I +L P ++ + + + +++ +AT+ L ++ + Sbjct: 59 LSQTHELTALRASGWAIRDILYPILIAAAFIALLNFYIVSELATNSHLQASLLKKELRSI 118 Query: 141 ------NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRK 194 N + + + + + I K Sbjct: 119 NPLLLLNNKHLMRVKGAYFHAMGNSRVGEFAKNALFAMPSKQNNRIQLMIAKSLHADSVL 178 Query: 195 DADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---LNIPIKMDGFQKFSEQFASRSFYE 251 ++ + ++ + + + + + T I S S Sbjct: 179 FIGNSVTNMTTLPVENGESFDHFVVENLEKTMTPIQDFSLIFQRNVFSLSNDHLKLSLLI 238 Query: 252 IIKK-----------MSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 K + K R+ + + + + + TL+ + + SR Sbjct: 239 YRMKEQALHLRQPNLLREEMKQLQKQQNRSYAEIIRRFSLAIAVFSFTLMGCAFGMNISR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + +V + + + Y I + + LIP +L + +S IL + Sbjct: 299 HRSNKGVVF--VIALAVFYLISYFTAKGIEHHLFSATLLYLIPHLLILGISSFILYRVSR 356 Query: 361 G 361 G Sbjct: 357 G 357 >gi|260886192|ref|ZP_05897457.1| putative permease [Prevotella tannerae ATCC 51259] gi|260850440|gb|EEX70309.1| putative permease [Prevotella tannerae ATCC 51259] Length = 629 Score = 55.1 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 24/95 (25%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 Q++ + + + I A + R + + Y I Sbjct: 335 GDKSVRTHRIQWHQKFTMSIACIFFFFIGAPLGA-IIRKGGLGMPTIIAVILFIFYYIIN 393 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 T + G + I ++ L + + Sbjct: 394 TSGMKMARDGAWNMIFGMWISTVVLTPLGCFLTYK 428 >gi|51474040|ref|YP_067797.1| hypothetical protein RT0862 [Rickettsia typhi str. Wilmington] gi|51460352|gb|AAU04315.1| conserved hypothetical protein (possible transmembrane protein) [Rickettsia typhi str. Wilmington] Length = 360 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 131/358 (36%), Gaps = 11/358 (3%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +YF K L + +V++ + ++ + + L +P+++ + Sbjct: 6 KYFIKNILPLLIIVTFSVTSIVWITQILKLLYLFDK--GIKVIDFFNLVVLVLPILLFIL 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P IT++ + ++ NL +L+I +A G++ QL P + ++ + +F + + I Sbjct: 64 LPVITVISVLYIYNNLKVERQLIILQASGVNNIQLALPALYVALTVMLFAYYISSTILPL 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF------IGAKKILPENHIWEDFT 180 + K+N + + +I+ I+ ++ D Sbjct: 124 SHINLKSRLSFIKNNYISSMIEEKTFNKITKNITVFIDKKLAGNIMNGIIIFDNRNADKP 183 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 SI + + + + + V + +S + + + Sbjct: 184 SIVFAGSGTLNIHGNNPIFELNKGLRQEYDV---NGNLTQLTFDSLMIKLQNDSSLASQR 240 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 ++ + Y I + ++ S+ I + + + I+ PL + +A +V L + Sbjct: 241 TQHNKEANEYYISELLTPSHDLVITKKIKLIAEAHQRIIWPLYNFVLPCLALAVFLRYPY 300 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 S + I +L T I + S L + A +++ +++ + +L++K Sbjct: 301 SKKTTFIPVLFSALTVLLVTAIHFILQNFASKNLDFIFACYFNLLVALTIGLYLLVRK 358 >gi|237750188|ref|ZP_04580668.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229374082|gb|EEO24473.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 356 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 117/359 (32%), Gaps = 8/359 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + + YLK TL L G +D + + + + N A Sbjct: 2 FFWFVALRYLKPTLVILCGLEFFFICVDSLQYFDALAQSAN----NAIWFLAFDAMYAFN 57 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P L+ IV + +L ++++ V ++G S ++ P + L+ + + Sbjct: 58 YVLPLALLLGLIVFYISLIKSNQYVALLSLGYSRRKIFYPPFLIINLVVCGYIGLNATDF 117 Query: 125 TSGEKIGIDLIQQWKD---NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 ++ +++ + + D ++ + + + Sbjct: 118 VYAQERADNIVSSSNNADVSKDLFIRYNTDYVFFEKVYPLLQKAENIQIYHTEYKDSRKL 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 ++I + + D + + G I +STT K F Sbjct: 178 VSITRAKEGYFHNDEWKLLNPQVSILPTSYDLGDKGMITTGHDSTTTLKGFKPKVLDTFY 237 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + S + + + R Y L V P + + +I A + +R Sbjct: 238 KNKPAISITDAFYSLQILMQEGA-DTARTRGVLYTLAVTPFFISMLCVIIAYYAPPLARY 296 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 ++ M++ + + + + +P + L+P+ + + +SI+ + ++ Sbjct: 297 GNLAMLGVSLSVLSLMVWGVFFSLGKLNANAVFIPEFSMLVPLGILLVVSIVYYRKLDE 355 >gi|213162832|ref|ZP_03348542.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 219 Score = 55.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 3/150 (2%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS--NI 264 +L+ + T L ++ FQ + ++ + Sbjct: 50 QLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWN 109 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 N RA + ++ I + + M L+ +S+ R + + + + + + I T Sbjct: 110 TDNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTS 168 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILI 354 +KS G G L PV ++ ++L+I + Sbjct: 169 IKSNGGKGKLDPVIWMWAVNLIYLALAIGL 198 >gi|255322347|ref|ZP_05363493.1| ribonuclease PH [Campylobacter showae RM3277] gi|255300720|gb|EET79991.1| ribonuclease PH [Campylobacter showae RM3277] Length = 341 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 101/347 (29%), Gaps = 21/347 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY F +L T +++ ++ ++ + L +P ++ Sbjct: 6 RYLFSNFLGTFASLFATLFLIMSIVFFI-QIARITSYIEITFIELFKLYMFMLPRVLLFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P V ++FF L+R +E ++ +G S ++ F++ S + IF ++ + + Sbjct: 65 VPIAFFVSLALMFFRLSRENESIVLFTLGYSPVRIAKFFLIVSGAVSIFLIVTAIILIPT 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ + + K + S+ I + S Sbjct: 125 AAELNSNFVSYKKTVAKLNLKTTEFGQKFSDWMVFIQNEKSDENGTLYEGVTLYSPKEGA 184 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 ++ + + L + Y K + Sbjct: 185 HRFVLAKNARLTNNNAVLEFTLSEGKIYDMRDASWHKTDFGTMKISTAQEDSVAQTKSFV 244 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + + + + F ++I L +A TL A S+ + R + + Sbjct: 245 Q------------YWQAMSEDKKRAKDFATYVLIALFPLATTLFALSLGIVTYRYEKGFV 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 F +T+I + S A +L SI Sbjct: 293 YFGI-FGVLFGYFTLIMLFSSR-------VFIAIAAIFLLFFIASIF 331 >gi|88703588|ref|ZP_01101304.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] gi|88702302|gb|EAQ99405.1| Predicted permease YjgP/YjgQ family protein [Congregibacter litoralis KT71] Length = 362 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 105/332 (31%), Gaps = 6/332 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y L TL + ++ + + + + R+P ++ ++ Sbjct: 6 YLAGDVLGHTLAVSSVLLAIILTGRFVKYLAEAAS-GKLAAEILLPVMFYRLPGFLELLL 64 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P + ++ + L SE+VI A G+ +L + + ++L+ + + + G Sbjct: 65 PLGLFIGILMSYGRLYVESEMVILSACGVGPAKLASFTLAPALLIMLVVAGLSLLVTPQG 124 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 L+ + Q + A I PE + + + Sbjct: 125 VARSEALLNDPQALQGLQLLAAGRF--QPRGDDGTVTYAADIDPEAGELDQVFLYAPEDR 182 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 +A + V + V Y R + T ++ F F ++ Sbjct: 183 TADTEVAGVTVARRGSVVVDPESGVRYLELRDGYRFSGTPGRADYRIVRFGTFGQRLPDT 242 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQF--YFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + + + + + AE + ++ + + LM+ + L+A S+S R + Sbjct: 243 PSMARSEPVDAKPTAALLDSDNAEDRAALHWRLSVALMVPVVALLALSLSKTNHRRGRY- 301 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPV 337 I +A + + +++ G Sbjct: 302 IKLAPALLLHLSYLFALASIRTSVAEGDAPAY 333 >gi|213855151|ref|ZP_03383391.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 206 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 3/150 (2%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS--NI 264 +L+ + T L ++ FQ + ++ + Sbjct: 37 QLRDGSQVVTLNKGTRFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWN 96 Query: 265 FHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITI 324 N RA + ++ I + + M L+ +S+ R + + + + + + I T Sbjct: 97 TDNDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGRV-LSMLPAMLLYLLFFLIQTS 155 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILI 354 +KS G G L PV ++ ++L+I + Sbjct: 156 IKSNGGKGKLDPVIWMWAVNLIYLALAIGL 185 >gi|150025640|ref|YP_001296466.1| hypothetical protein FP1590 [Flavobacterium psychrophilum JIP02/86] gi|149772181|emb|CAL43657.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 484 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 1/108 (0%) Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 S + +FS Y VI + M I A + R + Sbjct: 339 MSAKQNFDINNFSLDYKKKDINSFWISIYEKFVIAFACILMFFIGAPLGA-IIRKGGLGL 397 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + + + T K + + P A I L + L+I + Sbjct: 398 PIVFAMLIFITFHFLNTFGKKVAQESGMAPFLGAWISFFLLVPLAIFL 445 Score = 45.1 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 1/162 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K YL + + + + + + +++ + + ++P Sbjct: 1 MKILDKYLLKTYLTSFFGVFIILIFIFILQTVWLFISELAGK-DLDLILILKFLLFKMPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 +I ++P L+ I+ F ++ E ++ GIS + + LL I N Sbjct: 60 LIPLVLPLSVLLSAIMTFGDMAENYEFAAMKSAGISFQRTMKGLTFFIFLLSIGAFFFAN 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 + E + + + I N + Sbjct: 120 NVIPYAEFKFNNFRKNIAQVKPAMAIAEGQFSTIGNINIKVN 161 >gi|323137915|ref|ZP_08072990.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] gi|322396918|gb|EFX99444.1| permease YjgP/YjgQ family protein [Methylocystis sp. ATCC 49242] Length = 388 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 56/177 (31%), Gaps = 4/177 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L+ Y FK L L + V + L I + P Sbjct: 1 MPRLLFSYLFKRVGFGVLIVQLALSVPVVLSYLLYQLPPAAVRGGLVIPALVGIT----P 56 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + +P V + F + + + A+ +S W + P + + + + + Sbjct: 57 TVAYVTLPMAVGVATALEFSRMASEGMIAVLYALRLSAWSICRPALTLAAGIVVLGYALA 116 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 N IA D++ +++ + + D + N + ++I Sbjct: 117 NFIAPHYATNMQDVLNVVRNSLNHRMLDAAHFYTFDNGVKTLYIERWVTPDLAANLF 173 >gi|189464158|ref|ZP_03012943.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] gi|189437948|gb|EDV06933.1| hypothetical protein BACINT_00494 [Bacteroides intestinalis DSM 17393] Length = 632 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 81/270 (30%), Gaps = 4/270 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + + + + L + ++M +S A + Sbjct: 5 KKLDIFILKSFCTLFMGTFFICLFIFMMQFLWKYVDEMVGK-GLEMSVLAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ ++ F N EL+ +A GIS+ +++ P +V I + + N Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIVFIIFICGVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPKAQTKLWTLLISMKQKSPELDIPEGVFYDEIDGYNLYVKHKNR---KTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +K + +D + K + G + S +N + F E Sbjct: 181 NFEKGFENAQIIKSDSGRLEMTADKQHLYLHLYNGEQFENLKSQNMNQKNVPYRREAFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + A F + S+ ++ Sbjct: 241 KHAIIEFNSDFNMVDAGIMSSQSNSKDMAM 270 Score = 40.8 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 28/105 (26%), Gaps = 1/105 (0%) Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 SF+ R T ++ + + + + I A + R + V + Sbjct: 352 WSFKSFNITQTDTSLRRHMTSWHEKLTLSVACLIFFFIGAPLG-GIIRKGGLGMPVVVSV 410 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + Sbjct: 411 LIFIIYYIINNTGYKMARDGQWIVWMGMWTSTAILAPLGAFLTYK 455 >gi|327537720|gb|EGF24427.1| hypothetical protein RBWH47_05036 [Rhodopirellula baltica WH47] Length = 430 Score = 54.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 3/146 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY +L+T L + V + + S VLA P ++ Sbjct: 4 IDRYVLILFLRTVCVCFLSLAGIFIVFHAFTAMDDLIAQSKVGDSLPLVLAKFYGPYLLL 63 Query: 65 QI---IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ITL+ + L RT EL + + G+S ++L P ++ S+ + + Sbjct: 64 LFDMTGTIITLMAFLFTAGWLRRTGELTATLSAGVSHGRILRPMIIASLAIISVQLANRE 123 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKS 147 + + + ++ Sbjct: 124 WVIPRFRDSLTMKAKNLSGDIEQAVM 149 Score = 46.2 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG- 329 T + IV + A+ L+ + R + +++ + + + TI + G Sbjct: 340 RTTTHERIVRAPLDFALILLVLP-MVVNRRGRKLFVLIGSAVGLIIAFFALKTIASALGG 398 Query: 330 KSGILLPVAAALIPVILTISLS 351 + ++ P AA IP+++ L+ Sbjct: 399 STTMVTPGIAAWIPLLIIGPLA 420 >gi|224536882|ref|ZP_03677421.1| hypothetical protein BACCELL_01758 [Bacteroides cellulosilyticus DSM 14838] gi|224521506|gb|EEF90611.1| hypothetical protein BACCELL_01758 [Bacteroides cellulosilyticus DSM 14838] Length = 632 Score = 54.3 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 82/270 (30%), Gaps = 4/270 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + + + + L + ++M +S A + Sbjct: 5 KKLDIFILKSFCTLFMGTFFICLFIFMMQFLWKYVDEMVGK-GLEMSVLAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ ++ F N EL+ +A GIS+ +++ P +V IL+ + N Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIVFIILICGVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPKAQTKLWTLLISMKQKSPELDIPEGVFYDEIDGYNLYVKHKNR---KTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +K + +D + K + G + S +N + F E Sbjct: 181 NFEKGFENAQIIKSDSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQKNVPYRREAFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + A F + SN ++ Sbjct: 241 KHAIIEFNSDFNMVDAGIMSNQSNSKDMAM 270 Score = 39.3 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 27/100 (27%), Gaps = 1/100 (1%) Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 +S R T ++ + + + + I A + R + V + + Sbjct: 357 YSMSQTDTSLRRHMTSWHEKLTLSVACLIFFFIGAPLG-GIIRKGGLGMPVVVSVLIFII 415 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 Y I + G + + L + + Sbjct: 416 YYIINNTGYKMARDGQWVVWMGMWTSTAILAPLGAFLTYK 455 >gi|330997503|ref|ZP_08321352.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] gi|329570534|gb|EGG52258.1| permease, YjgP/YjgQ family [Paraprevotella xylaniphila YIT 11841] Length = 633 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 1/160 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + + FK Y + + + + + +++ ++ A + Sbjct: 5 KKIDIFVFKAYSLLFVGTFFICLFIFLMQFMWRYVDELIGK-GLTLDVLAHFFYYASLTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ +++ F NL EL+ +A GI + ++L P ++ +ILL I + N Sbjct: 64 IPMSLPLAILLASLITFGNLGERFELLSMKAAGIPLVRILQPIIIFNILLCIGSFYFQNI 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI 162 +K LI K + + + Sbjct: 124 TGPEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIF 163 Score = 49.7 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 1/94 (1%) Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 +++ + L + I A + R + V + Y I Sbjct: 362 DQSTRTHWVEWHKKFTLSLACLFFFFIGAPLGA-IIRKGGLGVPVVISVTIFIFYYIINV 420 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + KSG +P + ++ + I + + Sbjct: 421 SGEKMAKSGEWIPWFGEWLSSMVLCPIGIFLTYK 454 >gi|325282782|ref|YP_004255323.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] gi|324314591|gb|ADY25706.1| permease YjgP/YjgQ family protein [Deinococcus proteolyticus MRP] Length = 402 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 6/214 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + L +L L+ L + A +VP + Sbjct: 4 INRYILSELIPPLLAGVLLFTALLSFGYFF---VSSQWLQGVAPGLVAQWIGYQVPDTLV 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +++P +++ IV F LN ELV ++ GI + Q P + +LL + ++ + +A Sbjct: 61 KVLPMAAVLMTIVAFGRLNTERELVALQSGGIGLGQAGRPVALIGLLLALLSLWLSLWVA 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 L ++ + S Sbjct: 121 PKANVETRSLYWDVMTGSGLSSMAGRTLDLGGGLNVYWAGYDPATRKLQNVRAERWSKDD 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR 218 K+ +++ ++ ++ ++L + Sbjct: 181 PKRVELVFARE---GTFEDNLLRLTDYQAFTVNY 211 >gi|213022333|ref|ZP_03336780.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 125 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 1/123 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ NY + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GNYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 IQ P L+ ++ L + SELV+ +A G + Q+ + +I L + T+ + Sbjct: 63 DIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGE 122 Query: 122 PIA 124 +A Sbjct: 123 WVA 125 >gi|332880892|ref|ZP_08448562.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681066|gb|EGJ53993.1| permease, YjgP/YjgQ family [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 633 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 1/160 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 + + FK Y + + + + + +++ ++ A + Sbjct: 5 KKIDIFVFKAYSLLFVGTFFICLFIFMMQFMWRYVDELIGK-GLTLDVLAHFFYYAGLTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ +++ F NL EL+ +A GI + ++L P ++ +ILL I + N Sbjct: 64 IPMSLPLAILLASLITFGNLGERFELLSMKAAGIPLIRILQPIIIFNILLCIGSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDI 162 +K LI K + + + Sbjct: 124 TGPEAQKKFYTLIYSMKQKSPELEIPEGIFYSEIPGYNIF 163 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 41/144 (28%), Gaps = 1/144 (0%) Query: 214 YQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ 273 + R ++ ++ + + + S + +K + Sbjct: 312 TKIARQTLNFDTLYSQLTVSQQQSILRNAMQKSTVATNEYEFRGLISKDIDQSTRTHWVE 371 Query: 274 FYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 ++ + L + I A + R + V + Y I + KSG Sbjct: 372 WHKKFTLSLACLFFFFIGAPLGA-IIRKGGLGVPVVISVTIFIFYYIINVSGEKMAKSGE 430 Query: 334 LLPVAAALIPVILTISLSILILLQ 357 +P + ++ + I + + Sbjct: 431 WVPWFGEWLSSMVLCPIGIFLTYK 454 >gi|29347827|ref|NP_811330.1| hypothetical protein BT_2417 [Bacteroides thetaiotaomicron VPI-5482] gi|29339729|gb|AAO77524.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] Length = 616 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 74/256 (28%), Gaps = 4/256 (1%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 + + + + L +++ +S A ++ +P L+ ++ Sbjct: 3 FIGTFFICLFIFMMQFLWRYVDELVGK-GLDMSVIAQFFFYSALTLVPISLPLAILLASL 61 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + F N EL+ +A GIS+ +++ P L + N + + LI Sbjct: 62 ITFGNFGERYELLAMKAAGISLLKIMRPLAFFVCGLVAVSFYFQNVVGPIAQTKLYTLII 121 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 K + + D + K + + D + + H A Sbjct: 122 SMKQKSPELDIPEGVFYSEIP---DYNLKIAKKNRKTGMMYDVLIYNLKDGFENAHIIYA 178 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 D + K + G + + S ++ ++F E+ F Sbjct: 179 DSGRMEMTADKQHLWLHLYSGDLFENLRSQSMKSQNVPYRREEFREKHTIIEFDSDFNMA 238 Query: 257 SFSNKSNIFHNYRAET 272 S SN Sbjct: 239 DASIMSNTSAAKDMSM 254 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 24/259 (9%), Positives = 65/259 (25%), Gaps = 2/259 (0%) Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEK-IGIDLIQQWKDNGDKQKSDIIPWMQISNP 158 ++ + L +++ + + + K + ++ + Sbjct: 182 RMEMTADKQHLWLHLYSGDLFENLRSQSMKSQNVPYRREEFREKHTIIEFDSDFNMADAS 241 Query: 159 QQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGR 218 AK + + + + K V + Sbjct: 242 IMSNTSAAKDMSMLQASIDSMKMVGDSIGRQYYREVSEGNFRSTYGLTKEDTVKIMEANI 301 Query: 219 IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 + +S P+ S + + I S++ S+ + + E +++ I Sbjct: 302 TEYNIDSLYEVAPLMQKQKVISSAASRAENLSSDINFKSYTMGSHDYSMRKHEIEWHKKI 361 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 I L + I A + R + V + + Y I + G + Sbjct: 362 TISLSCLLFFFIGAPLG-GIIRKGGLGMPVIVSVMVFIIYYIIDNTGYKMARDGRWVVWM 420 Query: 339 AALIPVILTISLSILILLQ 357 + L + + Sbjct: 421 GVWTSSAVLAPLGAFLTYK 439 >gi|225024725|ref|ZP_03713917.1| hypothetical protein EIKCOROL_01611 [Eikenella corrodens ATCC 23834] gi|224942520|gb|EEG23729.1| hypothetical protein EIKCOROL_01611 [Eikenella corrodens ATCC 23834] Length = 370 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 104/340 (30%), Gaps = 10/340 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 R F K +T + + + + + ++ + A L A ++ + Sbjct: 5 RKFIKEVSQTAMGVFVLLLATLVAVQAVKLLGGAAGGK-VAADAVATLVAFWTVALMPIV 63 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 + + + V R SE+ + + G+S++ + P + ++ + T LV + Sbjct: 64 LILTAYISALTVLSRYWRDSEMAVWLSSGLSLYGWIRPLMAFAVPFALLTALVSMLVMPW 123 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH--IWEDFTSITI 184 + + + K D + + ++ K Sbjct: 124 ADARSREFAEVLKRRQDTSMVRPGVFQEFGGSTPRVYFVEKFDAGSGEAANLFIREQNPQ 183 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + I + ++L Y D + + + Sbjct: 184 GRDTLITAERGRFAEADNKRTLELFNGRRYSGTPGMADYDEVSF------ERLHLVVGTA 237 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 +I ++ + K N + + I +P+ ++ + L+A +S +RS + Sbjct: 238 PKLVQRDIHRRTVPTAKLWGNTNPDLRGELMWRITMPVSVLILALLALPLSYMDNRSGR- 296 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + I + +T+++ SG + ++P Sbjct: 297 SYSLLSAIGMFLLYQNGLTLVRDGISSGKIPLWPGLIVPH 336 >gi|331001132|ref|ZP_08324763.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] gi|329569437|gb|EGG51215.1| permease, YjgP/YjgQ family [Parasutterella excrementihominis YIT 11859] Length = 384 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/362 (11%), Positives = 108/362 (29%), Gaps = 19/362 (5%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGE---LPNYSISRGAVLAATRVP 60 I + T +V I L I NQ + A + +P Sbjct: 2 IYRKALTSELSNTAGGAFTVLFSIVVTIGLVRILNQTAGGRYDTGSILEVVAYTSLINLP 61 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISR-AIGISIWQLLNPFVVGSILLGIFTVLV 119 +I + + R SE+ + A G+S+ + P + ++ + + Sbjct: 62 ALIS----LALFLAVFMTLNRYWRDSEMFVWFSAGGLSLTSWIRPVLRFALPVVLVVAAC 117 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS--NPQQDIFIGAKKILPENHIWE 177 ++ ++ D K +++ + ++ + Sbjct: 118 SIAVSPWSRAQVQAYRDRFAQKEDISKLSSGRFIEAKSGRQVFFLEGVDQEKGKVKTLLM 177 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDG 236 + + R + + + L +Y + + + I+MD Sbjct: 178 VELKKDGSRSVLVSDRGHIENKPNGDRYIVLDDGRKYDTKPSGLGASVSDFREYEIRMDS 237 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSL 296 + I + ++ RA ++ ++ I PL+ + + L+A +S Sbjct: 238 SPSEVGANKKLNAMPIEDLIKRTD-------NRAASELFWRISWPLVALNLALLAIPLSY 290 Query: 297 EFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 RS + + + ++I +++ G + + A L + L+ + Sbjct: 291 NNPRSMKYYGQ-TAAVLIFILYLNALSIFQTWITQGKVGILGATLYMNVPVAVLTTFLFY 349 Query: 357 QK 358 + Sbjct: 350 RL 351 >gi|224026840|ref|ZP_03645206.1| hypothetical protein BACCOPRO_03597 [Bacteroides coprophilus DSM 18228] gi|224020076|gb|EEF78074.1| hypothetical protein BACCOPRO_03597 [Bacteroides coprophilus DSM 18228] Length = 631 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 76/237 (32%), Gaps = 1/237 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K +L + + + L +++ I A + Sbjct: 5 KKLDIFVLKSFLLLFAGTFFICLFIFMMQFLWRYVDELVGK-GLEIKVLAQFFFLSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I +P L+ ++ F N EL+ +A GI + +++ P ++ +LLG+ + N Sbjct: 64 IPLSLPLAILLAALMTFGNFGERYELLSMKAAGIPLLRIMQPVILFCVLLGLTSFFFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + +K LI K + + + + + Sbjct: 124 VGPKAQKELWTLIVSMKQKSPEVDIPEGVFYSDIDGYNIYVKQKDRETGILKDVLIYNFS 183 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + II + L + + + + + + + N+P + + F++ Sbjct: 184 DGFENAHIIWAAEGKLELTADKQHLYLHLYNGEQFENLKSQAGLSRNVPYRRETFRE 240 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 34/110 (30%), Gaps = 1/110 (0%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S S+ K + + ++ I + L + I A + R + Sbjct: 346 SLSSDWSMKSYLTKETDANIRGHRSDWHKKITLSLACIIFFFIGAPLGA-IIRKGGLGMP 404 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + Y I + KSG + + + ++ L + + Sbjct: 405 VVLSVLIFILYYIIDSGATRVAKSGEMNIILGTWMSTLVLAPLGGFLTYK 454 >gi|303258296|ref|ZP_07344303.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] gi|302859049|gb|EFL82133.1| permease YjgP/YjgQ [Burkholderiales bacterium 1_1_47] Length = 364 Score = 54.3 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 105/340 (30%), Gaps = 13/340 (3%) Query: 23 GAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNL 82 +V I L I NQ Y + A + + +I + + Sbjct: 1 MLFSIVVTIGLVRILNQTAG-GRYDTGSILEVVAYTSLINLPALISLALFLAVFMTLNRY 59 Query: 83 NRTSELVISR-AIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDN 141 R SE+ + A G+S+ + P + ++ + + ++ ++ Sbjct: 60 WRDSEMFVWFSAGGLSLTSWIRPVLRFALPVVLVVAACSIAVSPWSRAQVQAYRDRFAQK 119 Query: 142 GDKQKSDIIPWMQIS--NPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLA 199 D K +++ + ++ + + + R + Sbjct: 120 EDISKLSSGRFIEAKSGRQVFFLEGVDQEKGKVKTLLMVELKKDGSRSVLVSDRGHIENK 179 Query: 200 IIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQKFSEQFASRSFYEIIKKMSF 258 + + L +Y + + + I+MD + I + Sbjct: 180 PNGDRYIVLDDGRKYDTKPSGLGASVSDFREYEIRMDSSPSEVGANKKLNAMPIEDLIKR 239 Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 ++ RA ++ ++ I PL+ + + L+A +S RS + + + Sbjct: 240 TD-------NRAASELFWRISWPLVALNLALLAIPLSYNNPRSMKYYGQ-TAAVLIFILY 291 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++I +++ G + + A L + L+ + + Sbjct: 292 LNALSIFQTWITQGKVGILGATLYMNVPVAVLTTFLFYRL 331 >gi|332662936|ref|YP_004445724.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] gi|332331750|gb|AEE48851.1| permease YjgP/YjgQ family protein [Haliscomenobacter hydrossis DSM 1100] Length = 538 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 31/94 (32%), Gaps = 1/94 (1%) Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + + + + I ++ I A + R + I + + Sbjct: 414 MENRVKFIYDWQMKYSIAVVCFIFMFIGAPMGA-IVRKGGFGYPLLVAIVFFMLFVILTI 472 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + ++ ++ AA +P ++ + L I + + Sbjct: 473 FCRKIAETFVVSAYLAAWLPCLILMPLGIWLTYK 506 >gi|47155054|emb|CAE85253.1| putative permease [Escherichia coli] Length = 227 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 63/228 (27%), Gaps = 1/228 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 L QQ + D ++ + N + + + +TS Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTS 179 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN 229 + D V L Y D N L Sbjct: 180 TANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQILP 227 >gi|237747610|ref|ZP_04578090.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229378972|gb|EEO29063.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 357 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/335 (10%), Positives = 105/335 (31%), Gaps = 7/335 (2%) Query: 24 AMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLN 83 + + L I Q + + L + I+ V ++V Sbjct: 3 LFTITITMMLIRILGQAAK-GRVASDDVLALLGFTSLNYLPIILILTGFVSVLLVVTRSY 61 Query: 84 RTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGD 143 + SE+V+ A G+S+ + L P + +I + + L+ + + ++++ D Sbjct: 62 QDSEMVVWFASGLSLTRWLRPVIEFAIPIVVLVSLLGFFATPWAYRQSAEFRERFEKRED 121 Query: 144 KQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYN 203 + + + +K+ + + ++ + N Sbjct: 122 IARISPGKF--QESAAAQRVFFVEKMSDDLNKVKNVFINSTRNGNITTVVSKEGTVETNE 179 Query: 204 DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSN 263 K + G + + + D + + A S + + + + Sbjct: 180 KGEKF---IVLDDGIRYEETPDQSGFRIMDFDKYTAYIASKADMSGTNVSARSMTTMELM 236 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 N + + + I +P M + + L+ + R+ + + + +++ Sbjct: 237 TDINSHKQGELLWRIGLPFMAILLILLGIPLGFVNPRAGR-SFNLIIAVLLYMTYSNLLS 295 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 M+++ ++ A ++ + +L+ + Sbjct: 296 FMQAYVVQKKIMFGLAWWPLHLIVALVIVLLFAWR 330 >gi|118474326|ref|YP_891923.1| YjgP/YjgQ permease [Campylobacter fetus subsp. fetus 82-40] gi|118413552|gb|ABK81972.1| putative permease, YjgP/YjgQ family [Campylobacter fetus subsp. fetus 82-40] Length = 341 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 94/320 (29%), Gaps = 14/320 (4%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +Y F +L T +++ ++ ++ S S L +P I+ Sbjct: 5 NKYLFASFLSTFASLFATLFLIMSIVFFI-QIARITSYIEISFSELLKLYLFMLPQILLF 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 IP V + FF L++ +E ++ +G + N F+ S ++ + ++ + Sbjct: 64 TIPIGFFVSVAMSFFRLSKENESIVMFTLGQDPKNISNFFIFISFIVSVVMLINSLIVMP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + + + I+ K + + I + ++ + Sbjct: 124 IAQNLNDNFIEYKKTKLSLNIKPSEFGQKFGSWMVFIEKQNDNNDSLKYENIVMYDVSDE 183 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + I + N ++ LKK Y + +S + + K Sbjct: 184 NERLITSQSGDIKNQNSNLELILKKGKMYDIRDNKWNISSYENMVIRTLIKDNKN----- 238 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 F + + ++ L +A + A S + R + Sbjct: 239 -------ETYSLKEYWLKAFSDDKRAKDLSIYTLVALFPLASVMFALSFGIVTYRYEKGI 291 Query: 306 IIVAYGIFSGFMLYTIITIM 325 I F + I + Sbjct: 292 IYFGI-FGVLFAYFAFIMLF 310 >gi|325278206|ref|ZP_08143700.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] gi|324096660|gb|EGB95012.1| permease YjgP/YjgQ family protein [Pseudomonas sp. TJI-51] Length = 89 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 35/87 (40%) Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 F+ ++ P++ A+ L+A S RS V G+ GF+ ++ + Sbjct: 1 WLAFWTKVLQPMVTAALVLMAISFIFGPLRSVTLGQRVFTGVLVGFVFRIGQDLLGPSSQ 60 Query: 331 SGILLPVAAALIPVILTISLSILILLQ 357 P+ A +IP + + +L + Sbjct: 61 VFGFPPLLAVVIPAGICALAGVWLLRR 87 >gi|332520665|ref|ZP_08397127.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] gi|332044018|gb|EGI80213.1| permease YjgP/YjgQ family protein [Lacinutrix algicola 5H-3-7-4] Length = 540 Score = 53.9 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 65/236 (27%), Gaps = 8/236 (3%) Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 D + ++ + + + + A + ++ + Sbjct: 192 YYYDDTPPKDYKERLRKPFAKSIFDKYTMNIDLSQLNAVDLDDKSTDNKYSMLNISQLNY 251 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF---- 244 + L+K + ++ T+ +D FQ + Sbjct: 252 TTDSLHTERQEVYELFATNLEKRTNINTLNLSVEPKKDTIYTGNVLDLFQNNRKIQLLDY 311 Query: 245 ---ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 A S +II+ + K+ R + + L + + + A + R Sbjct: 312 AINAISSTTQIIQSKEANLKTKSNWLNRHIIALHEKFALALACIILFFVGAPLGA-LIRK 370 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + + I + I K+ K G P A ++ + LSI + + Sbjct: 371 GGLGLPMVIAIVLFLTYHFIGIFAKNSAKDGTFNPALATWFSTLIMLPLSIYLTRR 426 >gi|62185347|ref|YP_220132.1| hypothetical protein CAB734 [Chlamydophila abortus S26/3] gi|62148414|emb|CAH64181.1| conserved hypothetical membrane protein [Chlamydophila abortus S26/3] Length = 367 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 118/360 (32%), Gaps = 14/360 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNE--------IQNQMGELPNYSISRGAVLAATRV 59 Y +K Y+ T +F L ++I++ + N S+ + ++ Sbjct: 2 YIWKRYVLTKFWFSLVSLIVLAFVFYASIHHSLHTIKGNTTSLASGASLKLSILYYLAQI 61 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 L + +IP + V + F++ E+++ +A G+S+ L P + S ++ + Sbjct: 62 ALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIHSSFIITLLLYAN 121 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + E+I + DK + + +K L N ++ Sbjct: 122 FQWLHPICEQISTTKEHIDRGTLDKVQDKVPALYLKDQTVLLYSSIEQKTLTLNQVFWIK 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 TI K+ + + + + + K + + F K Sbjct: 182 NPKTIYTMEKLAFTTPSLPIGLDVIRFSATESGSMELSEYSDMKEFPEIEFGFYDNPFSK 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAAS 293 E + + ++ + FY++++ PL ++ +I+A Sbjct: 242 IFTAGGKNRLSESFQAIPWNATGLGLSTTIPQRILSLLSTFYYMLISPLACISSMIISAY 301 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + L FSR + + + + + S +L + P+I+ ++ Sbjct: 302 LCLRFSRVPTVTLAYLVPLGTINTFFIFLKAGMVLANSSVLPILPVMFFPLIILAIITNY 361 >gi|225011756|ref|ZP_03702194.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] gi|225004259|gb|EEG42231.1| permease YjgP/YjgQ family protein [Flavobacteria bacterium MS024-2A] Length = 463 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 12/133 (9%), Positives = 36/133 (27%), Gaps = 1/133 (0%) Query: 225 STTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLML 284 ++ I RS + + + + + Sbjct: 297 EFIISNEIWKKSRVMDESIVKVRSSIRNLNTKKNTFFAYQKTINLHKITLQEKYTLIFAS 356 Query: 285 VAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 + + LI A++ R + + + + I K+ + + P A + Sbjct: 357 LFLFLIGAALGA-IIRKGGLGLPLVLSVLIFLTYHYIGLFGKNAAEDNSISPFFATWLST 415 Query: 345 ILTISLSILILLQ 357 + +I++ + Sbjct: 416 FILAPFAIILTRR 428 Score = 43.9 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 74/252 (29%), Gaps = 4/252 (1%) Query: 26 ILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRT 85 + +F+I + I + P +I ++P L+ +++ + L+ Sbjct: 1 MFIFIIQTFWLFIDELAGKGLDIIIISKFLLYYSPKLIPLVLPLSVLLASLMTYGTLSEN 60 Query: 86 SELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQ 145 E ++ GIS+ + L + +LLGI T N + GE +L + Sbjct: 61 YEFAAMKSTGISLQRALLALTIFHVLLGIGTFYFSNHVIPYGELKSYNLRRNLAKLEPTL 120 Query: 146 KSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDK 205 + +I + +K + ED ++ A+ + ++ Sbjct: 121 AIREGIFNEIGEINIKVA---RKYGDNDRFLEDVIIHEYTPNSENNIVIKAERGEMKSET 177 Query: 206 VKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIF 265 + Y ++ + K + + + N Sbjct: 178 TD-PNLKLVLYNGNRYEEVIPKKATDKERIPHAKVYFEEYEMNIDLSKFNNVDLEEENYK 236 Query: 266 HNYRAETQFYFL 277 +R + Sbjct: 237 STFRMQKIDQLR 248 >gi|329964131|ref|ZP_08301297.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] gi|328525651|gb|EGF52680.1| permease, YjgP/YjgQ family [Bacteroides fluxus YIT 12057] Length = 633 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 28/105 (26%), Gaps = 1/105 (0%) Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 S+S R T ++ + + L + I A + R + V + Sbjct: 352 WSFKSYSISQTDTSLRRHMTSWHEKLTLSLACLIFFFIGAPLG-GIIRKGGLGMPVVVSV 410 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + Sbjct: 411 LIFIVYYIINNTGYKMARDGKWIVWMGMWTSTAILAPLGAFLTYK 455 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 81/270 (30%), Gaps = 4/270 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + + + + L ++M ++ A + Sbjct: 5 KKLDIFILKSFCMLFMGTFFICLFIFMMQFLWRYVDEMVGK-GLEMTVLAQFFFYSALSL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ ++ F N EL+ +A GIS+ +++ P ++ + + + N Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICLVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + + D Sbjct: 124 IGPQAQTKLWTLLLSMKQKSPEVDIPEGVFYDEIDGYNLYVKHKDR---KTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +K + AD + K + G + S +N + F E Sbjct: 181 NFEKGFENAQIIKADSGRLEMTADKQHLYLHLFSGEQFENLKSQNMNQRNVPYRREAFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + A F + S+ ++ + Sbjct: 241 KHAIIEFNSDFNMVDTGIMSSQSNSKDMKM 270 >gi|332877577|ref|ZP_08445321.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684426|gb|EGJ57279.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 150 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 2/137 (1%) Query: 222 DKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIP 281 K K+D +++ +E+ K + + Y Sbjct: 12 RKEQLDTIFKFKIDDLMPMEYTAENKNLFELDKFIERERMKGSPNLNMYLLVKYRRWGAI 71 Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK-SGILLPVAAA 340 +TLI +VS R I + G+ GF + + + SG L P+ A Sbjct: 72 STAFILTLIGVAVSSVKKR-GGMGINLMVGVVVGFTFVFFDRVFGTLAQTSGGLSPLMAV 130 Query: 341 LIPVILTISLSILILLQ 357 LIP ++ ++L+IL+L + Sbjct: 131 LIPNLIFLTLAILLLRK 147 >gi|189501480|ref|YP_001957197.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] gi|189496921|gb|ACE05468.1| permease YjgP/YjgQ family protein [Candidatus Amoebophilus asiaticus 5a2] Length = 527 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 80/267 (29%), Gaps = 8/267 (2%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 F K ++ + ++ F+I +E+ + + L P Sbjct: 15 FIKLFILVLSVTVFIMLMQFFLIYFDELIGK-----DLGFWVYVQLFCYFGINATPMAFP 69 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 TLV +++VF +L EL ++ GI ++L P + LL IF I Sbjct: 70 LATLVSSLMVFGSLGEQLELTALKSAGIPFIRILRPLLFLVTLLSIFVYFSNGYIVPKVT 129 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 L+ + + N D I ++ LP+ ED K Sbjct: 130 VKAHTLLYDLRKKKPSIAIKEGVF---YNGIPDYSIRVERKLPDQKTLEDIVIYDHTKNK 186 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 +H A + V+E G ++K + + F S Sbjct: 187 GNVHMTTASFGQLTTINNGQYLVIELFNGHNYLEKLPEKKDNKTSTASSKVIIPNFYRTS 246 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFY 275 F + N + T ++ Sbjct: 247 FKAQKVLIDLDAFKLTRTNEKYFTYYH 273 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 32/290 (11%), Positives = 75/290 (25%), Gaps = 6/290 (2%) Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 ++ L + E ++ S ++ F S + + T + Sbjct: 208 LVIELFNGHNYLEKLPEKKDNKTSTASSKVIIPNFYRTSFKAQKVLIDLDAFKLTRTNEK 267 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKI 190 K + K +I Q I +K + + + Sbjct: 268 YFTYYHSTKTTKEIIKDISKMQSRIKKNQTSILKDFQKHYHLPALDHTNLPANHKETAAV 327 Query: 191 IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS---- 246 + D + ++ + S + I + K S+ Sbjct: 328 DNIDITDTSSHQALSLQTDSKTIIAPSVQEDNVVSNKIPITHDLANNPKRSQIIQKALEQ 387 Query: 247 -RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + I+ + S + + + + M LI AS+ + Sbjct: 388 VKELRYKIQPYTNKITSVDRKLKEFQIEKNKRTSYAIGCILMLLIGASLGA-LIKKGGFG 446 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I + + Y + + K I+ ++ A P I+ + + L Sbjct: 447 IPLLISTVFILLYYMVDIFGTKWAKVDIIDTISGAWAPNIVLLPFGLFFL 496 >gi|15618903|ref|NP_225189.1| hypothetical protein CPn0995 [Chlamydophila pneumoniae CWL029] gi|15836526|ref|NP_301050.1| hypothetical protein CPj0995 [Chlamydophila pneumoniae J138] gi|16752032|ref|NP_445398.1| hypothetical protein CP0860 [Chlamydophila pneumoniae AR39] gi|33242364|ref|NP_877305.1| hypothetical protein CpB1032 [Chlamydophila pneumoniae TW-183] gi|4377324|gb|AAD19132.1| CT838 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189772|gb|AAF38649.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979368|dbj|BAA99202.1| CT838 hypothetical protein [Chlamydophila pneumoniae J138] gi|33236875|gb|AAP98962.1| hypothetical protein CpB1032 [Chlamydophila pneumoniae TW-183] gi|269302795|gb|ACZ32895.1| putative permease, YjgP/YjgQ family [Chlamydophila pneumoniae LPCoLN] Length = 366 Score = 53.9 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 119/355 (33%), Gaps = 12/355 (3%) Query: 11 KYYLKTTLYFLLGAMILVFVI------DLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 ++ L + L ++L + L+ ++ S+ + ++ L + Sbjct: 6 RHLLTRFWFALTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQISLKAE 65 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + V F + E+++ +A G+S+ L++P ++ ++ + + Sbjct: 66 FLMPQLVAVATTSTLFAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYANFQWLH 125 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 EKI I + DK++ I K L N+++ TI Sbjct: 126 PICEKISITKENMDRGTTDKEQGKIPALYLKDQTVLLYSSIEPKTLTLNNVFWIKDPKTI 185 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K+ + + + + K + + F K Sbjct: 186 YTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFNFYENPFSKLFSAG 245 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAET------QFYFLIVIPLMLVAMTLIAASVSLEF 298 E K + ++ + QFY++++ PL +A +++A + L F Sbjct: 246 NKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLACMAAIILSAYLCLRF 305 Query: 299 SRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 SR+ + + + + + + S +L + P+I+ L+ Sbjct: 306 SRTPTVTLAYLIPLGTVNIFFVFLKAGIVLASSSVLPTLPVMAFPLIVLFLLTNY 360 >gi|149194453|ref|ZP_01871550.1| hypothetical protein CMTB2_07626 [Caminibacter mediatlanticus TB-2] gi|149135628|gb|EDM24107.1| hypothetical protein CMTB2_07626 [Caminibacter mediatlanticus TB-2] Length = 338 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 102/336 (30%), Gaps = 17/336 (5%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 + Y + YLK + L+G +L ++D + ++ N + I Sbjct: 3 FWYILRNYLKNFVITLIGFALLFVLVDYSFNFAKLPNSSNLQTLYIFYVFI----DSIFI 58 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 + P + ++ + + +ELV ++G +++L P + S+ I + + + Sbjct: 59 LYPLALVFAFLLTLNKMIKFNELVSFYSLGFKPFKILKPIIYFSLFFFILIMYLQSTKIA 118 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 + + + + K++ P D + Sbjct: 119 YVNQYAKAIKNNMQLKNKNLFLKYNN----------SVVYIKELNPILKEAYDVKIFVVK 168 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 I N + K V+ + + + + Sbjct: 169 DNKLIKIIYTKKAKFFKNHWISNKAVITTLSKDRWDKEEKKLVFLENFKPKILSNLKTLN 228 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + S + + + R + +F + PL L+ + ++ S R + Sbjct: 229 TISLSDAYIAIKYFK---DIDLNRVLSIVFFKVFTPLSLIILIILFFYTSPIHIRISNVS 285 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 I + I ++ + ++ F K G++ AL Sbjct: 286 IFMIKSISLTIFVWGVELLLFKFTKQGVMPYYVIAL 321 >gi|154174487|ref|YP_001408138.1| permease YjgP/YjgQ [Campylobacter curvus 525.92] gi|153793102|gb|EAU00183.2| permease YjgP/YjgQ [Campylobacter curvus 525.92] Length = 342 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/350 (10%), Positives = 100/350 (28%), Gaps = 22/350 (6%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +Y +L T +++ ++ ++ + L +P ++ Sbjct: 5 NKYLLYNFLGTFASLFSTLFLIMSIVFFI-QIARVTSYIEITFGELLKLYMFMLPRVLLF 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++P V + F L++ +E ++ +G S + F+ S L ++V + Sbjct: 64 VVPIAFFVALAMTLFRLSKENESIVIFTLGSSPNSIAKFFLAFSAALSALLLIVAIVMIP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 ++ + I K + S+ + + + I Sbjct: 124 IASELNSNFIDYKKTVAKLNLKPTQFGQKFSDWMVYVGSEGSDENGTIYKNIVMFNPFIK 183 Query: 186 KKNKIIHRKDADLAIIYNDKV-KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 ++I ++A + ++ L Y +++ + Sbjct: 184 DSQRLIVAQNAKMINTKSNIELSLNNGKIYDMRGKVYHQSNFKSMTIRTAQSEKINDVDS 243 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + + +++ L +A TL A S + R + Sbjct: 244 I------------KEYWLEAKTSTKRKKDLSTYVLVALFPLATTLFAISFGIVTYRYEKG 291 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + F +T+I ++ P+ A + + Sbjct: 292 AVYLGT-FGILFGYFTLIMLLSPR-------PIIAIPGVFAAFFAAGVWF 333 >gi|317477113|ref|ZP_07936354.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] gi|316906656|gb|EFV28369.1| hypothetical protein HMPREF1016_03338 [Bacteroides eggerthii 1_2_48FAA] Length = 635 Score = 53.5 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 79/270 (29%), Gaps = 4/270 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + + + + L + ++M ++ A + Sbjct: 5 KKLDIFILKSFCLLFMGTFFICLFIFMMQFLWKYVDEMVGK-GLEMNVLAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ ++ F N EL+ +A GIS+ +++ P + L+ + N Sbjct: 64 VPASLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRPLIFFISLICCVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + E + D Sbjct: 124 IGPKAQTKLWTLLVSMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNR---ETGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +K + +D + K + G + S +N + F E Sbjct: 181 NFEKGFENAQIIKSDSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQKNVPYRRETFVE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + A F + SN + Sbjct: 241 KHAIIEFNSDFNMVDAGFMSNQSSSKDMSM 270 >gi|62185346|ref|YP_220131.1| hypothetical protein CAB733 [Chlamydophila abortus S26/3] gi|62148413|emb|CAH64180.1| conserved hypothetical membrane protein [Chlamydophila abortus S26/3] Length = 357 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 111/360 (30%), Gaps = 9/360 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT + L + + + L EI + + + + L A ++P Sbjct: 1 MP-ILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAK--DVPYPTVLRLTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S + P ++ S + Sbjct: 58 YLLPFILPISCFISAFSLFRGLSDNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + + AK Sbjct: 118 SELASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVDHCAKSKFDNVITALKRD 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D ND V+ + VV + ++ + ++ + Sbjct: 178 KEIANVGLIKTIIPDV-----ANDTVQARGVVMISKLPSTLTDQCSSHSKEYYIETLDEM 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + M + ++ + + L + + L+ +++ Sbjct: 233 LIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSHTYLPETLRRIGIGLLCITLTYSGMV 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKS-GILLPVAAALIPVILTISLSILILLQKE 359 + I + + I+ GK+ L P I + + I +E Sbjct: 293 LGTYKPRFRKSITLYCIFPVMDLILLIVGKNTSSLFPALTLFIFPQVISWIVFAIKAYRE 352 >gi|288817926|ref|YP_003432273.1| hypothetical protein HTH_0610 [Hydrogenobacter thermophilus TK-6] gi|288787325|dbj|BAI69072.1| hypothetical protein HTH_0610 [Hydrogenobacter thermophilus TK-6] gi|308751524|gb|ADO45007.1| permease YjgP/YjgQ family protein [Hydrogenobacter thermophilus TK-6] Length = 352 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 117/353 (33%), Gaps = 10/353 (2%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y +Y+K + + +V L E+ E S + +P+ Sbjct: 2 LGKYVLFFYIKLFIVVNAILLGIVSSYALAELLFLFKEK---SANIAISYLLNLLPISFF 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++PF ++ +++ ++ +I ++ G+S + L ++ + + F +++ + Sbjct: 59 YLLPFSAVITMMILLKHIFSKKLDLIVQSFGVSPLKFLLNIILFLVFVSFFNLIMSFDVY 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 K + +++K + + + + + + + Sbjct: 119 PESNKNLYSIEKEFKKRQEVEDLIVRNAWFFKEESGERIYINFQFVDIKDGNIAGVFLVK 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K+ I+ +D D + L + ++ + + Q E+ Sbjct: 179 SSKSNILEVIQSDRGSWKGDIILLPIAKVWNIKEGNFVAKGISIKLFE-IKNAQPIGEKV 237 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S ++++ S + + ++ +I L ++ I +V + Sbjct: 238 EHISLHQLLLLYSLGKRVGLNYH----LYLSEIIRRFLSSLSPIAIGITVMSYAIKRRSI 293 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA--ALIPVILTISLSILIL 355 + + F + + + F +S P+ A IP+++ + L Sbjct: 294 LAGFLSFVPAFFFYWFSFVLTRFFSESVSFNPLYGLFAYIPLVILSLKGLYYL 346 >gi|215919050|ref|NP_819829.2| putative permease [Coxiella burnetii RSA 493] gi|206583935|gb|AAO90343.2| hypothetical membrane spanning protein [Coxiella burnetii RSA 493] Length = 372 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 112/335 (33%), Gaps = 3/335 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I++RY K L T L L +I+ N ++ + + +VP Sbjct: 1 MSVIVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAA-AGKITVKAVMEIMSLQVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L++ ++P + ++ + E+VI A G+S Q++ +V + +G+ ++ Sbjct: 60 LLLGYLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLM 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +++ +K + +S+ Q + G + + Sbjct: 120 LSVEPKMQWYRVKILKDAVATASLEKIVPGRFQLLSSNGQVFYAGGVNDHHQKMLNVFLA 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + AD A Y+ ++ R ++ + + Sbjct: 180 QSETAGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRL 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +A + + I +PL + L+ +S R Sbjct: 240 TSPAMDITERVDAMPTSKLWHLHSKD-LKAAAELQWRIAMPLSVWLFALLIVPLSEANPR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + ++ + + + +++ + G++ Sbjct: 299 KGKFAQMLP-AVLIYIGYANFMFLGRTWIEDGVIS 332 >gi|289548597|ref|YP_003473585.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] gi|289182214|gb|ADC89458.1| permease YjgP/YjgQ family protein [Thermocrinis albus DSM 14484] Length = 351 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 38/358 (10%), Positives = 107/358 (29%), Gaps = 12/358 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + Y+K + + E + S+ +P+ Sbjct: 2 LQRYILRLYIKAFGLSSAVLLGTGVLYLTFETLLVFRQK---SLEIFFQYILLSLPVAFL 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + P ++ + ++ + + + G+ L+ P + S++L I + + I Sbjct: 59 YLSPIVSWIALTMLIRFFIQRQLDRLIVSFGVPPIHLVRPVIFFSLVLSILHIYMSFQIY 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 S ++ + +++K W + + ++ ++ D + Sbjct: 119 PSFQRSLYTIEKEYKKGKKDTLLIKDQWFALKDGEKVVYSHIGLADVSKGTAYDVFLLYT 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + + I + Y+ + + + + + Sbjct: 179 KEGS--IEATLRASKAFWKGNSLFIPDAYYEDLEKGGKFYGPMEVSFLSLSNIRPLASKL 236 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 +F E+I + + + I+ L L M L+ ++ + Sbjct: 237 EHITFTELISVYGMAERLG-----INRYAYLAEILRRLQLSLMPLLMVTIVARALLKRRS 291 Query: 305 RIIVAYGIFSGFMLYTII-TIMKSFGKSGILLPVAAALIPVILTISLSILILLQKEDG 361 + + L+ + ++K + + P+ L+P + + + L E G Sbjct: 292 LVEGSLYGGFSLALHMLSLNLIKITAEEIGVNPLWG-LLPSFFLLMMVLRSLYDLEKG 348 >gi|300312408|ref|YP_003776500.1| permease [Herbaspirillum seropedicae SmR1] gi|300075193|gb|ADJ64592.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 53.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 94/301 (31%), Gaps = 5/301 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I R + T + + L +I Q + L + + Sbjct: 2 IFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAG-GQVASQDVIALIGFQSLNYM 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 I+ + ++V + SE+V+ A G+S+ + + P + + + Sbjct: 61 PIILILTGFISVLLVMTRSYQDSEIVVWFACGMSLTRWIAPVLRFGWPIVALVAALSFVA 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ D + + + + + F+ +I Sbjct: 121 TPWANQQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIG 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D KN ++ K+ + I + + + +Y P + ++ S+ Sbjct: 181 ADGKNSVVVAKEGETVIDPDGEKFVVMNQGRRYDGSPGLPDFQIVDFERYGLLIGNQSQN 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 A ++ K++ + + I +P M + + L+A +S R+ + Sbjct: 241 AAGERSARALQMNELVAKNDGYARGELL----WRIALPFMALTLMLLAIPLSFVNPRAGR 296 Query: 304 P 304 Sbjct: 297 S 297 >gi|328676743|gb|AEB27613.1| conserved membrane protein of unknown function [Francisella cf. novicida Fx1] Length = 283 Score = 53.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 104/289 (35%), Gaps = 7/289 (2%) Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA ++ Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTIVFGGYIAPILQRQV 60 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKII 191 + + + K+ + A I I + I Sbjct: 61 DTNMVTYNTHDLWFKTPDG--FMNIANIEPTKGKAYGIRKFMVQDNKVREIRYAENATYI 118 Query: 192 HRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE 251 + A++ I ++ + + IPI + ++ +F + Sbjct: 119 NDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPIPISVAKVITINDNDY-LNFSQ 177 Query: 252 IIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYG 311 + M SN +F+ + PL L+ + L+A +S+ +RS+ + + G Sbjct: 178 LTSYM----LSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLLG 233 Query: 312 IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 F GF + I I L P+ A P ++ + L I + ++ ++ Sbjct: 234 AFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSKE 282 >gi|89898055|ref|YP_515165.1| hypothetical protein CF0248 [Chlamydophila felis Fe/C-56] gi|89331427|dbj|BAE81020.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 367 Score = 53.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 117/360 (32%), Gaps = 14/360 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNE--------IQNQMGELPNYSISRGAVLAATRV 59 Y +K Y+ T + L +I++ I N S+ + +++ Sbjct: 2 YIWKRYVLTKFWLSLVFLIVLAFIFYASIHHSLHAIKGNATPLASGASLKLSILYYLSQI 61 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 L + +IP + V + F++ E+++ +A G+S+ L P +V S ++ + Sbjct: 62 ALKAEFLIPQLVAVATTLTLFSMQNKREVLLLQASGLSLKSLTAPLIVSSFIITLLLYAN 121 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + EKI + DK + + +K L N ++ Sbjct: 122 FQWLHPICEKISTTKEHIDRGTLDKAQDKVPVLYLKDQTVLLYSSIEQKTLTLNKVFWIK 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 TI K+ + + + + + K + + F K Sbjct: 182 NPKTIYTMEKLAFTTPSLPIGLDVIRFSGTESGNMELSEFSDMKEFPEIEFGFYDNPFSK 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAAS 293 E + + ++ + FY++++ PL ++ +++A Sbjct: 242 IFTAGGKNRLSESFRAIPWNATGLGLSTTVPQRILSLLSTFYYMLISPLACISAMILSAY 301 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + L FSR + + + + + S +L + L P+I + Sbjct: 302 LCLRFSRVPTVTLAYLVPLGTINTFFVFLKAGIVLSNSSVLPTLPVMLFPLIALAIFTNY 361 >gi|269302797|gb|ACZ32897.1| putative permease, YjgP/YjgQ family [Chlamydophila pneumoniae LPCoLN] Length = 357 Score = 53.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 116/367 (31%), Gaps = 23/367 (6%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT + L + + + L EI + + + L A ++P Sbjct: 1 MP-ILWKVLIFRYLKTAAFCTLSLICISIISSLQEIVAYIAK--DVPYDTVLRLMAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P V +F L+ +++ RA G S ++ P ++ S + Sbjct: 58 YLLPFILPGSCFVSAFSLFRKLSDNNQMTFLRASGASQSIIMFPVLMVSGAICCLNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + + AK Sbjct: 118 SELASICRYQTCKEIANMAMTSPALLLQTLQKKENNRIFIAVDHCAKSKFDNV-----IV 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ + + + + + D VK K VV + ++S+ + ++ + Sbjct: 173 ALKGNNEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTESSSPSSQRFYIETLDEL 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY-------FLIVIPLMLVAMTLIAAS 293 + + + + + ++ + + I + + +T Sbjct: 233 LIPKITSTLFAGKSYLKTRTDYLPWKQLVKQSLKHSHLPETLRRVAIGFLCITLTYAGMI 292 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSI 352 + + R + I F+ + I+ GK+ L + L + Sbjct: 293 LGIHKPRFRK-------SIALYFIFPILDLILLIVGKNTKNLPLAFMLFVFPQLVSWVVF 345 Query: 353 LILLQKE 359 +E Sbjct: 346 AARAYRE 352 >gi|329943109|ref|ZP_08291883.1| hypothetical protein G5Q_0788 [Chlamydophila psittaci Cal10] gi|332287691|ref|YP_004422592.1| conserved hypothetical membrane transport protein [Chlamydophila psittaci 6BC] gi|313848265|emb|CBY17266.1| conserved hypothetical membrane protein [Chlamydophila psittaci RD1] gi|325506677|gb|ADZ18315.1| conserved hypothetical membrane transport protein [Chlamydophila psittaci 6BC] gi|328814656|gb|EGF84646.1| hypothetical protein G5Q_0788 [Chlamydophila psittaci Cal10] gi|328914944|gb|AEB55777.1| YjgP/YjgQ family protein [Chlamydophila psittaci 6BC] Length = 367 Score = 53.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 119/360 (33%), Gaps = 14/360 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNE--------IQNQMGELPNYSISRGAVLAATRV 59 Y +K Y+ T +F L ++I++ + N S+ + +++ Sbjct: 2 YIWKRYVLTKFWFSLVSLIVLAFVFYASIHHSLHTIKGNTTSLASGASLKLSILYYLSQI 61 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 L + +IP + V + F++ E+++ +A G+S+ L P + S ++ + Sbjct: 62 ALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIHSSFIITLLLYAN 121 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + E+I I + DK + +K L N ++ Sbjct: 122 FQWLHPICEQISITKEHMDRGTLDKVHDKVPALYLKDQTVLLYSSIEQKTLTLNQVFWIK 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 TI K+ + + + + + K + + F K Sbjct: 182 NPKTIYTMEKLAFTTPSLPIGLDVIRFSETESGSIELSEYSDMKEFPEIEFGFYDNPFSK 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAAS 293 E + + ++ + FY++++ PL ++ +I+A Sbjct: 242 IFTAGGKNRLSESFQAIPWNATGLGLSTTIPQRILSLLSTFYYMLISPLACISSMIISAY 301 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + L FSR + + + + + S +L + L P+I+ + Sbjct: 302 LCLRFSRVPTVTLAYLVPLGTINTFFIFLKAGMVLSNSSVLPILPVMLFPLIILAIFTNY 361 >gi|262277384|ref|ZP_06055177.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] gi|262224487|gb|EEY74946.1| putative permease, YjgP/YjgQ family [alpha proteobacterium HIMB114] Length = 360 Score = 52.8 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 101/329 (30%), Gaps = 6/329 (1%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 +RYFF + K + L +L++ + + + N IS A P I+ Sbjct: 7 YRYFFIEFFKLFILINLSLSLLIWFTQAARLLELVTDYGN-PISVYAKYLLLIYPKILDN 65 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 ++ ++ +EL I GIS +++ + I+ I + IA Sbjct: 66 TFLLSFIISLFFLYSKFETDNELQIYWLSGISKFKIHQLCIYIGIVSLIINLSFSIFIAP 125 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 G ++ K + K I+ + TI Sbjct: 126 WSSYQGRMILGNSKFTLINAVVKEKNFNSPLKGLTVYVEKNNKQGNIEGIFIYEKTRTIT 185 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + + + + + +K ++ K T+ K + +++ Sbjct: 186 AEKGEVLSDENGSYLKLINGTTQEK----TGSKVNFLKFQNTIFDFSKYQIKNTTAPKYS 241 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 R+ Y +I + S + I+ P M++ +T + + + + + + Sbjct: 242 ERNLYWLINNLDNKKIS-KARKIELREEINSRIIKPFMILILTSLISFLIFTNNENINSK 300 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 Y + + I+ I+ Sbjct: 301 KFKFYIYCFSVLGIILNEILVRLSGESII 329 >gi|212218293|ref|YP_002305080.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] gi|212012555|gb|ACJ19935.1| hypothetical membrane spanning protein [Coxiella burnetii CbuK_Q154] Length = 372 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 112/335 (33%), Gaps = 3/335 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I++RY K L T L L +I+ N ++ + + +VP Sbjct: 1 MSVIVFRYLCKEILGTLLATTLILLIIFMTNQFIHYLNDAA-AGKITVKAVMEIMSLQVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L++ ++P + ++ + E+VI A G+S Q++ +V + +G+ ++ Sbjct: 60 LLLGYLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLM 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +++ +K + +S+ Q + G + + Sbjct: 120 LSVEPKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLA 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + AD A Y+ ++ R ++ + + Sbjct: 180 QSETAGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRL 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +A + + I +PL + L+ +S R Sbjct: 240 TSPAMDITGRVDAMPTSKLWHLHSKD-LKAAAELQWRIAMPLSVWLFALLIVPLSEANPR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + ++ + + + +++ + G++ Sbjct: 299 KGKFAQMLP-AVLIYIGYANFMFLGRTWIEDGVIS 332 >gi|332885237|gb|EGK05488.1| hypothetical protein HMPREF9456_02689 [Dysgonomonas mossii DSM 22836] Length = 664 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 28/98 (28%), Gaps = 1/98 (1%) Query: 260 NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLY 319 + + + +++ V+ + I A + R + V + + Y Sbjct: 359 KINMQKNIRMHKVEWHRKFVLSFACLIFFFIGAPLGA-IIRKGGLGMPVVVSVLLFIVYY 417 Query: 320 TIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I I + G+ + L + + + Sbjct: 418 IIDNIGYKMARDGVWEVWQGMWLSSFALFPLGVFLTYK 455 >gi|212212731|ref|YP_002303667.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] gi|212011141|gb|ACJ18522.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] Length = 372 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 112/335 (33%), Gaps = 3/335 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I++RY K L T L L +I+ N ++ + + +VP Sbjct: 1 MSVIVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAA-AGKITVKAVMEIMSLQVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L++ ++P + ++ + E+VI A G+S Q++ +V + +G+ ++ Sbjct: 60 LLLGYLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLM 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +++ +K + +S+ Q + G + + Sbjct: 120 LSVEPKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLA 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + AD A Y+ ++ R ++ + + Sbjct: 180 QSETAGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRL 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +A + + I +PL + L+ +S R Sbjct: 240 TSPAMDITGRVDAMPTSKLWHLHSKD-LKAAAELQWRIAMPLSVWLFALLIVPLSEANPR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + ++ + + + +++ + G++ Sbjct: 299 KGKFAQMLP-AVLIYIGYANFMFLGRTWIEDGVIS 332 >gi|29840523|ref|NP_829629.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] gi|29834872|gb|AAP05507.1| YjgP/YjgQ family protein [Chlamydophila caviae GPIC] Length = 367 Score = 52.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 118/360 (32%), Gaps = 14/360 (3%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNE--------IQNQMGELPNYSISRGAVLAATRV 59 Y +K Y+ T + L ++I++ + N S+ + +++ Sbjct: 2 YIWKRYVLTKFWLSLVSLIVLAFVFYASIHHSLHAIKGNSTALASGASLKLSVLYYLSQI 61 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 L + +IP + V + F++ E+++ +A G+S+ L P + S ++ + Sbjct: 62 ALKAEFLIPQLVAVATTITLFSMQNKREVLLLQASGLSLKSLTAPLIRSSFIITLLLYAN 121 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + EKI + DK + + +K L N ++ Sbjct: 122 FQWLHPICEKISTTKEHMDRGTLDKAQDKVPALYLKDQTVLLYSSIEQKALTLNKVFWIK 181 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 TI K+ + + + + + K + + F K Sbjct: 182 NPKTIYTMEKLAFTTPSLPIGLDVIRFSETESGTMELSEFSDMKEFPEIEFGFYDNPFSK 241 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAAS 293 E + + ++ + FY++++ PL ++ +++A Sbjct: 242 IFTAGGKNRLSESFRAIPWNATGLGLSTTIPQRISSLLSTFYYMLISPLACISAMILSAY 301 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + L FSR + + + + + S +L + L P+++ + Sbjct: 302 LCLRFSRVPTVTLAYLVPLGTINTFFVFLKAGMVLSNSSVLPILPVMLFPLVVLAIFTNY 361 >gi|169837524|ref|ZP_02870712.1| Hypothetical membrane-spanning protein [candidate division TM7 single-cell isolate TM7a] Length = 125 Score = 52.8 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 +FY+ I L M LI S+ + R + + + G+ Y I TI++S Sbjct: 37 RIEFYYRISFALSSFVMCLIGLSLGSRYVR-GGAALNIGLSVIIGYAYYGISTILRSMAV 95 Query: 331 SGILLPVAAALIPVILTISLSILILLQKE 359 +G + AA IP+I+ + I + E Sbjct: 96 AGTVPIYAACFIPLIVFFVVGIKLFRDSE 124 >gi|330836570|ref|YP_004411211.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] gi|329748473|gb|AEC01829.1| permease YjgP/YjgQ family protein [Spirochaeta coccoides DSM 17374] Length = 427 Score = 52.8 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 55/140 (39%), Gaps = 1/140 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L +Y K +L + + FV + + ++ N S++ L +P + Sbjct: 9 LLRKYIVKEFLASFAVAFTFFFFIFFVNQILLLIQRVMVK-NVSVADMLTLVVLSIPQFL 67 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 PF +L +V + +E++ R+ GI ++ +P +V I+L + T +V + + Sbjct: 68 IYTFPFSSLSAASMVIGEFSAHNEIIAMRSSGIPYRRIFSPVLVIGIVLSLLTFIVADML 127 Query: 124 ATSGEKIGIDLIQQWKDNGD 143 ++ Sbjct: 128 LPFSSVRYQKEYREIMQKIP 147 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 1/101 (0%) Query: 258 FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 + K F+ + + + + + L A +S R + I + + Sbjct: 325 KNYKIEDFYYTYYRAELHKKLALSAACFCLILTALPISFIKVRHGRL-IGFGLSLLIACV 383 Query: 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + I+ M+ P P +L +++ + L ++ Sbjct: 384 YWFILFFMQLKIFDVSFSPGWLMWFPDVLVLAIGLAFLSRQ 424 >gi|257457656|ref|ZP_05622823.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445042|gb|EEV20118.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 300 Score = 52.8 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 75/272 (27%), Gaps = 7/272 (2%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY + + + +L ++L+ + DL Q + + +P Sbjct: 1 MKILQRYLLQLFFPVFVITILFFILLLQLGDLFLNLAQYLQNQ-VRFVTLLRVMYLYLPK 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I +P L + N+ +EL A G+ + L+ P V+ L I + Sbjct: 60 CISFAMPLSVLFASSYTMGNMYAKNELTSIFASGMPLTVLVAPLVLCGFALSIGMFYFED 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I ++ I L+ + + S + + I A + Sbjct: 120 RILIHFQRQKIALVNELLEPQQNLNSSDLVILSE---SGKIVYFADYYDDNRKELSNVLI 176 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLN---IPIKMDGFQ 238 + + + A D + Y + ++ + FQ Sbjct: 177 VMRTESGDVSTVIKGSSAQWQTDHWAITDKSIYTFTAENDVHYQDAIDEGLFSEPSETFQ 236 Query: 239 KFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 + S + + K Sbjct: 237 RNITSIDEMSIAQAKVFIDNLKKWACPTMNIF 268 >gi|242309279|ref|ZP_04808434.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524320|gb|EEQ64186.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 269 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/258 (12%), Positives = 79/258 (30%), Gaps = 10/258 (3%) Query: 110 ILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKI 169 I L IF++ + A + K + ++ + + + D Sbjct: 10 IFLPIFSIAFLIASAFVLLNATPFAYAKEKVDLIVERGYLGSYKSDLFIKYDNNYIYFAK 69 Query: 170 LPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI---------P 220 + + + + +++ +A A + L+ Sbjct: 70 IFPLLQSAEGIQVFEVENEEVLRIIEAPKATFNEGEWILENAKITTIQPQLEVGKNPLWV 129 Query: 221 IDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 ++ + K E+ S S + + M+ NI + + Y L++ Sbjct: 130 EEQKVYKTLVGFKPKILDNIYEKQGSISIVDAFEAMNLLEGQNI-NTQKLRASLYVLLLF 188 Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 P M + + + +R I I +++ I+ SG L P + Sbjct: 189 PFFAPLMMVCLSGFTPNSNRYANLGGITLGMILGILVVWGILFSFSRLSMSGFLQPEFSV 248 Query: 341 LIPVILTISLSILILLQK 358 ++P+ + +S + ++ Sbjct: 249 IMPIGILALISAWLFVRL 266 >gi|260891452|ref|ZP_05902715.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] gi|260858835|gb|EEX73335.1| permease, YjgP/YjgQ family [Leptotrichia hofstadii F0254] Length = 153 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 57/154 (37%), Gaps = 1/154 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ RY + +++ + ++ + + E+ ++ + +P Sbjct: 1 MKIIDRYIYNSLFLPSIFGISIFTFIMMLNVIMEVMERLF-ASDLPFISIIDYLFYAIPG 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ Q IP + ++V+ L+ T+E+V GI +++++ P + I+L + + + Sbjct: 60 VLVQTIPMGAFLGVMLVYGGLSETNEIVAMEGSGIGLFRIIRPAFIFGIILTLIGLGLEI 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQI 155 + K + K + Sbjct: 120 YVNPRALKKYKCTDKTNSSFKTKFIVRRKSFFDK 153 >gi|296274436|ref|YP_003657067.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] gi|296098610|gb|ADG94560.1| permease YjgP/YjgQ family protein [Arcobacter nitrofigilis DSM 7299] Length = 339 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 100/335 (29%), Gaps = 16/335 (4%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + T L + +I L + + +I L A +P II + Sbjct: 6 YLLSQFSNTFFPIFLVLFFITSIIFLVR-IASITSVITLNIFELGTLYAYNLPNIIFYTM 64 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P V ++ L+ EL++ + G++ +L F+ + L+ + +++ + Sbjct: 65 PISFFVAMVITLSKLSSEYELIVVTSFGLNPSNILKVFLPITFLISLSLLILSIGLIPKT 124 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + + +I Q + + + I K+ E +++ Sbjct: 125 KYLSQQMINQKTKEANFNIKASEFGQKFGDWLIYISKKDDKLYEEVKLFKTE---NKGTD 181 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 II + N LK + + + I++ + + + Sbjct: 182 QFIIAKNARLNNDAGNLSFILKDGKAFYFEQDKINQIDYKVMHINDTLSESQITPFTN-- 239 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 ++ ++ +F F ++ + + + R + Sbjct: 240 ---------AYEYWKERINSDGDIAKFSFYVLTSIFPFISIYLVVAFGYFNPRYEKN-RS 289 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 VAY + S M Y I + + + Sbjct: 290 VAYAVISVVMYYLISDPLTKSIGLLSIPSIIVFWT 324 >gi|194323556|ref|ZP_03057333.1| hypothetical protein FTE_1717 [Francisella tularensis subsp. novicida FTE] gi|208779047|ref|ZP_03246393.1| hypothetical protein FTG_1341 [Francisella novicida FTG] gi|194322411|gb|EDX19892.1| hypothetical protein FTE_1717 [Francisella tularensis subsp. novicida FTE] gi|208744847|gb|EDZ91145.1| hypothetical protein FTG_1341 [Francisella novicida FTG] Length = 283 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 98/294 (33%), Gaps = 17/294 (5%) Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 +V ++ L SE+++ R+ G S Q+ ++ ++ + T++ IA ++ Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIAPILQRQV 60 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKII 191 + + + K+ F+ I P + Sbjct: 61 DTNMVTYNTHDLWFKTPDG------------FMNIANIEPTKGKAYGIRKFMVQDNKVRE 108 Query: 192 HRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE 251 R I + + + + + K+ + A Sbjct: 109 IRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPIPISVAKVITIN 168 Query: 252 IIKKMSFS-----NKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 ++FS SN +F+ + PL L+ + L+A +S+ +RS+ + Sbjct: 169 DNDYLNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLIL 228 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 + G F GF + I I L P+ A P ++ + L I + ++ ++ Sbjct: 229 KLLLGAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSKE 282 >gi|224531722|ref|ZP_03672354.1| permease, YjgP/YjgQ family [Borrelia valaisiana VS116] gi|224511187|gb|EEF81593.1| permease, YjgP/YjgQ family [Borrelia valaisiana VS116] Length = 329 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 100/329 (30%), Gaps = 9/329 (2%) Query: 29 FVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSEL 88 + DL E + + +P + L + NL+ +E+ Sbjct: 1 MLGDLFVNLLNYLEK-DIGFKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLSMRNEI 59 Query: 89 VISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSD 148 + + G+S+ ++L P ++ S+ + N + LI+ + Sbjct: 60 IGLFSCGVSLTRILRPIILISVFISAALFFFDNYLVIDTVARRDILIKNSIGDSRSIDKT 119 Query: 149 IIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKL 208 II K + + + + I D K++ R D + A NDK KL Sbjct: 120 III-----RDLAREIYNIKSYDIDENTFSNLMIIIKDNKDEFQKRYDINKAEWKNDKWKL 174 Query: 209 KKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI-IKKMSFSNKSNIFHN 267 + E+ I +N+ + + + + S + K+ Sbjct: 175 HDIREFVKVGKKIKENAYDVLDGTGIIKLEPDYIRTVMLSSKALNFTKLINWINFLKTEQ 234 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY--GIFSGFMLYTIITIM 325 + L+ + L++ +V + I++ I + I I Sbjct: 235 LNYSDALFDLLNRIFFSFRLILLSFTVGFIALALKKNIFILSLLNSIAFAVVYVISIVIF 294 Query: 326 KSFGKSGILLPVAAALIPVILTISLSILI 354 G L A+ I + ++ + Sbjct: 295 NFLADLGYLHIYVASSFTTIFFLIINFFV 323 >gi|328675789|gb|AEB28464.1| conserved membrane protein of unknown function [Francisella cf. novicida 3523] Length = 283 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 97/289 (33%), Gaps = 7/289 (2%) Query: 72 LVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIG 131 +V ++ L SE+++ R+ G S Q+ V+ I+ I T++ IA ++ Sbjct: 1 MVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVVLVGIIGSITTIVFGGYIAPILQRQV 60 Query: 132 IDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKII 191 + + + K+ + + ++ ++ Sbjct: 61 DTNMVTYNTHDLWFKTPDGFMNIANIEPTKGKAYGIRKFMVQ---DNKVREIRYAESATY 117 Query: 192 HRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE 251 + + + + + N+ N +F + Sbjct: 118 INDASANVFNISKIIFPSNDGQKHIDIVTNMTNAVWSNPIPISVAKVITINDNDYLNFSQ 177 Query: 252 IIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYG 311 + M SN +F+ + PL L+ + L++ +S+ +RS+ + + G Sbjct: 178 LTSYM----LSNSQAKDSISLKFWQEVFQPLALMILILLSVPLSIGSTRSSTLILKLLLG 233 Query: 312 IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 F GF + I I L P+ A P ++ + L I + ++ ++ Sbjct: 234 AFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSKE 282 >gi|319956628|ref|YP_004167891.1| permease yjgp/yjgq family protein [Nitratifractor salsuginis DSM 16511] gi|319419032|gb|ADV46142.1| permease YjgP/YjgQ family protein [Nitratifractor salsuginis DSM 16511] Length = 340 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 104/352 (29%), Gaps = 22/352 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY + K L L +++V +I + + + N L +P I Sbjct: 6 RYILWSFAKAYLLVFLPFLLVVSLIFVI-QLSILSSRVNLEFRELVQLFGYMLPEIFFYT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + F + +E + ++G + ++L + +L +++ + Sbjct: 65 VPLSLIAALANTFTRFSEENEFIALFSLGHTPGKVLRFMIPTLLLFTALLLVLSVMLYPQ 124 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 ++ +Q + IS + G+ + E+ D + Sbjct: 125 MKQKLNHFKRQKIAEAT---------LNISPNKLSQNFGSYHVFVESKDANDTYRNMVLF 175 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 +A K+ + + + + Sbjct: 176 NQGTKGAYQLFIAREGRVANDGKRFTLTLRNGTGETSDPKKVENLHYRELDIYQYPRNVY 235 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 +S + + H+ + +LI + L + I A+++ R + Sbjct: 236 QSIVTSREYWKKA-----LHDKGRRGKLLYLIFVSLTPILAFGIIAALTFYNPRYQRSLS 290 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 I I + + KSG + A VI ++L I +L ++ Sbjct: 291 IAVIFITALAVYLP----AAILQKSGSVPLFIAL---VIFLLALGIFLLRRR 335 >gi|319900104|ref|YP_004159832.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] gi|319415135|gb|ADV42246.1| permease YjgP/YjgQ family protein [Bacteroides helcogenes P 36-108] Length = 633 Score = 52.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 77/270 (28%), Gaps = 4/270 (1%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + + + + L +++ ++ A + Sbjct: 5 KKLDIFVLKSFCMLFMGTFFICLFIFMMQFLWRYVDELIGK-GLEMTVLAQFFFYSALTL 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + +P L+ ++ F N EL+ +A GIS+ +++ +V L+ + N Sbjct: 64 VPVSLPLAILLAALITFGNFGERFELLAMKAAGISLLKIMRSLIVFIALVSCVSFYFQNV 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 I + L+ K + + + + + D Sbjct: 124 IGPQAQTKLWTLLLSMKQKSPEVDIPEGVFYDEIEGYNLYVKHKDR---KTGMLYDVLIY 180 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 +K + AD + K + G + S +N + F E Sbjct: 181 NFEKGFENAQIIKADSGKLEMTADKQHLYLHLFSGEQFENLKSQNMNQQNVPYRREAFRE 240 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAET 272 + A F + SN + Sbjct: 241 KHAIIEFNSDFNMVDAGIMSNQSSSKNMRM 270 Score = 40.1 bits (91), Expect = 0.56, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 25/105 (23%), Gaps = 1/105 (0%) Query: 253 IKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGI 312 S S R ++ + + + I A + R + V + Sbjct: 352 WNFKSVSISQTDDSLRRHYLSWHEKLTLSFACLIFFFIGAPLG-GIIRKGGLGMPVVVSV 410 Query: 313 FSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y I + G + + L + + Sbjct: 411 LIFIIYYIINNTGYKMARDGKWIVWTGMWTSTAILAPLGAFLTYK 455 >gi|332828499|gb|EGK01199.1| hypothetical protein HMPREF9455_02391 [Dysgonomonas gadei ATCC BAA-286] Length = 684 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 24/291 (8%), Positives = 74/291 (25%), Gaps = 10/291 (3%) Query: 73 VVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGI 132 + IV L R SE + ++ + + N A + Sbjct: 189 MAVIVCDSALMRGSEDKTFLLLN--LYHGQQFANFRQADVNSTSSRNNNQFAPYSRENFK 246 Query: 133 DLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIH 192 + N + D ++ + ++I + I + + + + Sbjct: 247 EKEVIIPFNTGFDRMDESN-LEGTQISKNIVQLSHSIDSMSARLDSVNIRDRKIIGQHTY 305 Query: 193 RKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI 252 + N + + + + + ++ ++ + + S Sbjct: 306 FSYRNTEAYQNRLKEADSLKVEKPKALQKKEQPAKIDFDSLLNSYSRDEMAQHLMSAASE 365 Query: 253 IKKMSFSNKSN------IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + ++ + + E + + + + I A + R + Sbjct: 366 AENSRYNMLESTQKAGLQKNIRFHEVERHRKFTLSFACLIFFFIGAPLGA-IIRKGGLGM 424 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 V + + Y I I + G+ + L + + + Sbjct: 425 PVVVSVALFIVYYIIDNIGYKMARDGVWEAWQGMWLSSFALFPLGVFLTYK 475 Score = 47.4 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 3/226 (1%) Query: 1 MPGI--LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 M I L+ + + +L + + +V + L + IS A L Sbjct: 1 MLKIKRLYTFVIQTFLPVFAMTFVICLFIVLMQFLWRYVEDLVGK-GLDISVLAELFLYA 59 Query: 59 VPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVL 118 +I +P L+ +++ F NL EL+ +A G+S+ + + P ++ + I Sbjct: 60 AFQLIPMALPLSLLLASLMAFGNLGERLELLSIKASGVSLLKAMKPLIILVAFISIGAFF 119 Query: 119 VINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 N + L+ K + + + H Sbjct: 120 FQNEAMPRIQVKLRALLWSIKQKSPELDIPEGSFYSDIPNYNLYVKKKNRETKMLHEVMI 179 Query: 179 FTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKN 224 + + +I A + + L + Q + Sbjct: 180 YDTSKGFDNMAVIVCDSALMRGSEDKTFLLLNLYHGQQFANFRQAD 225 >gi|15834847|ref|NP_296606.1| hypothetical protein TC0227 [Chlamydia muridarum Nigg] gi|270285013|ref|ZP_06194407.1| hypothetical protein CmurN_01133 [Chlamydia muridarum Nigg] gi|270289036|ref|ZP_06195338.1| hypothetical protein CmurW_01188 [Chlamydia muridarum Weiss] gi|301336411|ref|ZP_07224613.1| hypothetical protein CmurM_01210 [Chlamydia muridarum MopnTet14] gi|7190266|gb|AAF39099.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 354 Score = 52.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 115/368 (31%), Gaps = 23/368 (6%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKTT++ L + + + L EI + + + + + + A ++P Sbjct: 1 MP-ILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIAK--DVPYATVFRVTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S ++ P ++ S +L F Sbjct: 58 YLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPILITSGILCCFNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + I K I Sbjct: 118 SELASICRFQTGKEIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVIIALKHN 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D + + V + + T+ ++ + Sbjct: 178 QEISNIGFVETIIPDVNKDSVQAKNVLVIS------KVPLFSEARTSNPNEFYLETLDEL 231 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY-----FLIVIPLMLVAMTLIAASVS 295 + + + M + + + + I L+ MT ++ Sbjct: 232 FIPKITATLFAGKSYMKARTDYLPWKQLIQDVHLHLAEILRRVAIGLLCSTMTFSGLALG 291 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI--LLPVAAALIPVILTISLSIL 353 R +P + + + I GK+ + + L P +L+ + Sbjct: 292 TYKPRFRKP-------VLIYVLFPVLNLIFLIVGKNTTHPISALMLFLFPQLLSWLIFSW 344 Query: 354 ILLQKEDG 361 + ++ G Sbjct: 345 RIYKENQG 352 >gi|329943108|ref|ZP_08291882.1| hypothetical protein G5Q_0787 [Chlamydophila psittaci Cal10] gi|332287690|ref|YP_004422591.1| conserved hypothetical membrane protein [Chlamydophila psittaci 6BC] gi|313848264|emb|CBY17265.1| conserved hypothetical membrane protein [Chlamydophila psittaci RD1] gi|325506627|gb|ADZ18265.1| conserved hypothetical membrane protein [Chlamydophila psittaci 6BC] gi|328814655|gb|EGF84645.1| hypothetical protein G5Q_0787 [Chlamydophila psittaci Cal10] gi|328914943|gb|AEB55776.1| YjgP/YjgQ family protein [Chlamydophila psittaci 6BC] Length = 357 Score = 52.0 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 46/363 (12%), Positives = 115/363 (31%), Gaps = 10/363 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT + L + + + L EI + + + + L A ++P Sbjct: 1 MP-ILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAK--DVPYPTVLRLTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S + P ++ S + Sbjct: 58 YLLPFILPISCFISAFTLFRGLSDNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + + AK I Sbjct: 118 SELASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVDHCAKSKFDNVIIALKRD 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D ND V+ + VV + ++ + ++ + Sbjct: 178 KEIANVGLIKTIIPDV-----ANDTVQARGVVMISKLPSTLTDQRSSNSKEYYIETLDEM 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + M + ++ + L + + L+ +++ Sbjct: 233 LIPKITSTLFAGKSYMKTRTDYLPWKQLVKQSFSRTYLPETLRRIGIGLLCITLTYSGMV 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKS--GILLPVAAALIPVILTISLSILILLQK 358 + I + I I+ GK+ + + + P +++ + + ++ Sbjct: 293 LGTYKPRFRKSITLYCIFPVIDLILLIVGKNTSSLFPALMLFIFPQVVSWIVFAIKAYRE 352 Query: 359 EDG 361 G Sbjct: 353 NRG 355 >gi|33242365|ref|NP_877306.1| hypothetical protein CpB1034 [Chlamydophila pneumoniae TW-183] gi|33236876|gb|AAP98963.1| hypothetical protein CpB1034 [Chlamydophila pneumoniae TW-183] Length = 357 Score = 52.0 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 115/367 (31%), Gaps = 23/367 (6%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT + L + + + L EI + + + L A ++P Sbjct: 1 MP-ILWKVLIFRYLKTAAFCTLSLICISIISSLQEIVAYIAK--DVPYDTVLRLMAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P V +F L+ + + RA G S ++ P ++ S + Sbjct: 58 YLLPFILPGSCFVSAFSLFRKLSDNNHMTFLRASGASQSIIMFPVLMVSGAICCLNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + + AK Sbjct: 118 SELASICRYQTCKEIANMAMTSPALLLQTLQKKENNRIFIAVDHCAKSKFDNV-----IV 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ + + + + + D VK K VV + ++S+ + ++ + Sbjct: 173 ALKGNNEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTESSSPSSQRFYIETLDEL 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY-------FLIVIPLMLVAMTLIAAS 293 + + + + + ++ + + I + + +T Sbjct: 233 LIPKITSTLFAGKSYLKTRTDYLPWKQLVKQSLKHPHLPETLRRVAIGFLCITLTYAGMI 292 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSI 352 + + R + I F+ + I+ GK+ L + L + Sbjct: 293 LGIHKPRFRK-------SIALYFIFPILDLILLIVGKNTKNLPLAFMLFVFPQLVSWVVF 345 Query: 353 LILLQKE 359 +E Sbjct: 346 AARAYRE 352 >gi|15618904|ref|NP_225190.1| hypothetical protein CPn0996 [Chlamydophila pneumoniae CWL029] gi|15836527|ref|NP_301051.1| hypothetical protein CPj0996 [Chlamydophila pneumoniae J138] gi|16752031|ref|NP_445397.1| hypothetical protein CP0859 [Chlamydophila pneumoniae AR39] gi|4377325|gb|AAD19133.1| CT839 hypothetical protein [Chlamydophila pneumoniae CWL029] gi|7189771|gb|AAF38648.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979369|dbj|BAA99203.1| CT839 hypothetical protein [Chlamydophila pneumoniae J138] Length = 357 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 49/367 (13%), Positives = 115/367 (31%), Gaps = 23/367 (6%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT + L + + + L EI + + + L A ++P Sbjct: 1 MP-ILWKVLIFRYLKTAAFCTLSLICISIISSLQEIVAYIAK--DVPYDTVLRLMAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P V +F L+ + + RA G S ++ P ++ S + Sbjct: 58 YLLPFILPGSCFVSAFSLFRKLSDNNHMTFLRASGASQSIIMFPVLMVSGAICCLNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + + AK Sbjct: 118 SELASICRYQTCKEIANMAMTSPALLLQTLQKKENNRIFIAVDHCAKSKFDNV-----IV 172 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 ++ + + + + + D VK K VV + ++S+ + ++ + Sbjct: 173 ALKGNNEISHVGIIKSIIPDTTKDTVKAKDVVFISKLPDSLTESSSPSSQRFYIETLDEL 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFY-------FLIVIPLMLVAMTLIAAS 293 + + + + + ++ + + I + + +T Sbjct: 233 LIPKITSTLFAGKSYLKTRTDYLPWKQLVKQSLKHSHLPETLRRVAIGFLCITLTYAGMI 292 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAALIPVILTISLSI 352 + + R + I F+ + I+ GK+ L + L + Sbjct: 293 LGIHKPRFRK-------SIALYFIFPILDLILLIVGKNTKNLPLAFMLFVFPQLVSWVVF 345 Query: 353 LILLQKE 359 +E Sbjct: 346 AARAYRE 352 >gi|325954392|ref|YP_004238052.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] gi|323437010|gb|ADX67474.1| permease YjgP/YjgQ family protein [Weeksella virosa DSM 16922] Length = 500 Score = 51.6 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/247 (11%), Positives = 68/247 (27%), Gaps = 4/247 (1%) Query: 114 IFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN 173 + + + I+ + Q+ + K D + + + D Sbjct: 219 FLKLELFDGISYTEPLKNKSYEQRKRQENQTTKFDSLHYFIDISAIVDKQTQQDPGNFYK 278 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 ++ + ID K + A + + + + Sbjct: 279 NLKGKDLKLLIDSVQKTNQEFYLNNAKSNYISSYYYSNKMAELKQEKVKIEQPLVQFEQL 338 Query: 234 MDGFQKFSEQFASRSF---YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 Q S A + + + + + + R +Y + + I Sbjct: 339 EKNIQIISLNSAIANIDRDIQNNEFQIEEDNARKKYFSRINLHYYRNWSYAITCIIFFFI 398 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 A + + + V I + I ++ KSG L P +A + + Sbjct: 399 GAPLGAIVKK-GGIGMPVIMSIIVFIFYFIINFTAENLTKSGNLHPFLSAWAANFIFLPF 457 Query: 351 SILILLQ 357 S+L+LL+ Sbjct: 458 SVLLLLK 464 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/261 (11%), Positives = 69/261 (26%), Gaps = 3/261 (1%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L Y K ++ + + V + ++ L Sbjct: 1 MIKKLDGYVLKTFIGPFFFIFSILFFIFIVQFAWQEMDKYVGK-GLDWLTIGELIFYMGI 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +IQ ++P L+ +I+ F EL +A G+S+ ++L+ V LL I Sbjct: 60 NVIQLVLPLTILLGSIMTFGGFGERYELAAMKASGLSLVRILSSVFVLVALLSIGLYHFG 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + ++ ++ + + + + D Sbjct: 120 DKMMPYSQRKARQIMFSVIEAKPTLQITEGVFSNNIPGFSMKVNRVDG--DNSEKLTDIF 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 K + + + +K + P + + + Sbjct: 178 IHQQLSKTVLDENGNDINIEQDPLTIIAEKGILQVDKHNPRFLKLELFDGISYTEPLKNK 237 Query: 241 SEQFASRSFYEIIKKMSFSNK 261 S + R + K S Sbjct: 238 SYEQRKRQENQTTKFDSLHYF 258 >gi|216263568|ref|ZP_03435563.1| putative permease, YjgP/YjgQ family protein [Borrelia afzelii ACA-1] gi|215980412|gb|EEC21233.1| putative permease, YjgP/YjgQ family protein [Borrelia afzelii ACA-1] Length = 333 Score = 51.2 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 108/333 (32%), Gaps = 9/333 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 MIL+ + DL E N S+ + +P + L + NL+ Sbjct: 1 MILIILGDLFVNLLNFLEK-NISLKDIFYIYYLYLPKAFSDGVALSFLFAISNLIGNLSM 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 +E++ + G+ + ++L P ++ S+ + + N + LI+ N Sbjct: 60 RNEIIGLFSCGVPLTRILRPIILISVFISVVLFFFDNYLVIDTVAKRDLLIKNSIGNNGS 119 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 II K + + + + I D K++ R D + A ++ Sbjct: 120 IDKTIII-----RDLAREIYNIKSYDIDENAFSNLMIIIKDSKDEFQTRYDINKAEWKDN 174 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI-IKKMSFSNKSN 263 K KL + E+ I +N+ + + + + S + K+ Sbjct: 175 KWKLYGIREFVKVGRKIKENAYDVLDGTGIIKLEPDYIRTVMLSSKALNFTKLINWISFL 234 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY--GIFSGFMLYTI 321 + + L+ + L++ +V + I++ I + Sbjct: 235 KSEHLNYSDALFDLLNRIFFSFRLMLLSFTVGFIALALKKNIFILSLLNSIAFAVVYVIS 294 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I I G L A+ I + ++ L+ Sbjct: 295 IVIFSFLADLGYLNIYVASSFTTIFFLIINFLV 327 >gi|237752929|ref|ZP_04583409.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229375196|gb|EEO25287.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 344 Score = 51.2 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/317 (9%), Positives = 90/317 (28%), Gaps = 6/317 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 + F+ + + L + V+ I + + S L +P ++ +I Sbjct: 6 FLFQSFAQVFFPIFLVLFFIASVVIFIRIAG-VTFVVKISFLELLTLYFYTLPTMLFFVI 64 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P V ++ L+ EL + A+G++ +++ F ++L + ++ + Sbjct: 65 PLSFFVACVLGLSRLSFDYELPVLFALGMNPKKIVKIFFPIALLASVSLFVLSLILTPLS 124 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + +++ K + D ++ + G + + K Sbjct: 125 DIAYRQFLEERKSSIDVNLQAGEFGQKLGEWLVYVQKGKNSTYENI-VLLSLQAKGSQKD 183 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + ++ + + L Y+ +++ ++ + S Sbjct: 184 GLVFAKQANIGNVDGVMEAHLSDGKIYRKVSDGVER----ISFDEMILRSAVDFTGDGSV 239 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 E + + N + + L + + + Sbjct: 240 GLVEYWNRAFYENSRQDKTKRNLSMYVLLSLFPLISLFYFPFLGVKNPRYQKNYTILQAM 299 Query: 308 VAYGIFSGFMLYTIITI 324 V G+F M + Sbjct: 300 VVVGVFFALMYIVATYL 316 >gi|261749398|ref|YP_003257083.1| hypothetical protein BPLAN_316 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497490|gb|ACX83940.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 395 Score = 51.2 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 8/252 (3%) Query: 114 IFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPEN 173 + + I D + ++ + + + +++ N Sbjct: 137 NLFIFFYGKNLAINTILAEKGILIPNKKEDGFQIKLMKGFFYRDNPYEGKTYSYQMVHFN 196 Query: 174 HIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIK 233 + F I+ KN + D+ + ++ ++ + ++ D N + Sbjct: 197 SFIQSFKKPLIEYKNLDYYYDDSYKTLDTKKLMEKIHFLKKKNCQLYSDFQKLNYNSLFQ 256 Query: 234 MDGFQKFSEQFASRSF-------YEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVA 286 + RS + ++ ++ H + + + P+ + Sbjct: 257 KKKIFFKRSKNKKRSLLLHISILIDELQHQKKFLQNRKKHLAKYQFELQKKFTFPVTCII 316 Query: 287 MTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVIL 346 M LI A + R I + +T++TI ++ G+ + P A IP + Sbjct: 317 MFLIGAPLGA-IIRKGGMGRPTLIAIIIFIIYHTLLTITQNQGEKAEIWPWIGAWIPNFV 375 Query: 347 TISLSILILLQK 358 LSI I + Sbjct: 376 FFPLSIWITYKT 387 >gi|323344722|ref|ZP_08084946.1| hypothetical protein HMPREF0663_11482 [Prevotella oralis ATCC 33269] gi|323093992|gb|EFZ36569.1| hypothetical protein HMPREF0663_11482 [Prevotella oralis ATCC 33269] Length = 633 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 1/162 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 L + K + + ++ + L + +++ S+ A ++ Sbjct: 5 KKLDIFIAKQFGLLFIGTFFICQFVLMMQFLWKSIDELVGK-GLSMEVMAQFFWYAGLML 63 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 + Q +P L+ +++ F NL +SEL +A GIS+ Q ++ SI++ + N Sbjct: 64 VPQALPLAILLSSLIAFGNLGESSELTAIKAAGISLIQAFRSLIIISIIISFSSFYFQNY 123 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFI 164 + + L K + + Sbjct: 124 VGPTANMKIAQLWISMKQKSPELAIPEGIFYDGIPNSNLYVQ 165 Score = 42.0 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 24/95 (25%), Gaps = 1/95 (1%) Query: 263 NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTII 322 + + L + I A + R + V + + Y + Sbjct: 363 GDKLIREHRIEMISKFTLALSCLIFFFIGAPLGA-IIRKGGLGVPVIISVLVFIVYYILD 421 Query: 323 TIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G+ + + I L+ + + Sbjct: 422 NTGYRMARGGMWTIEFGKGLAPAVLIPLAAFVTYK 456 >gi|218679464|ref|ZP_03527361.1| putative permease protein [Rhizobium etli CIAT 894] Length = 138 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 1/125 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 II ++PF ++ +N SEL + A G L+ P ++ + ++ +F+ V N Sbjct: 70 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAGARRSVLIRPILLLAAVVSVFSFFVDN 129 Query: 122 PIATS 126 + Sbjct: 130 VVEPR 134 >gi|165919041|ref|ZP_02219127.1| putative permease [Coxiella burnetii RSA 334] gi|165917236|gb|EDR35840.1| putative permease [Coxiella burnetii RSA 334] Length = 370 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 111/332 (33%), Gaps = 3/332 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K L T L L +I+ N ++ + + +VPL++ Sbjct: 2 IVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAA-AGKITVKAVMEIMSLQVPLLL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + E+VI A G+S Q++ +V + +G+ ++ + Sbjct: 61 GYLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ +K + +S+ Q + G + + Sbjct: 121 EPKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSE 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + AD A Y+ ++ R ++ + + + Sbjct: 181 TAGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + +A + + I +PL + L+ +S R + Sbjct: 241 AMDITGRVDAMPTSKLWHLHSKD-LKAAAELQWRIAMPLSVWLFALLIVPLSEANPRKGK 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 ++ + + + +++ + G++ Sbjct: 300 FAQMLP-AVLIYIGYANFMFLGRTWIEDGVIS 330 >gi|153209375|ref|ZP_01947370.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] gi|120575375|gb|EAX31999.1| putative permease [Coxiella burnetii 'MSU Goat Q177'] Length = 370 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 111/332 (33%), Gaps = 3/332 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K L T L L +I+ N ++ + + +VPL++ Sbjct: 2 IVFRYLCKEILGTLLATTLILLIIFMTNQFIHYLNDAA-AGKITVKAVMEIMSLQVPLLL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + E+VI A G+S Q++ +V + +G+ ++ + Sbjct: 61 GYLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ +K + +S+ Q + G + + Sbjct: 121 EPKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLAQSE 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + AD A Y+ ++ R ++ + + + Sbjct: 181 TAGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + +A + + I +PL + L+ +S R + Sbjct: 241 AMDITGRVDAMPTSKLWHLHSKD-LKAAAELQWRIAMPLSVWLFALLIVPLSEANPRKGK 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 ++ + + + +++ + G++ Sbjct: 300 FAQMLP-AVLIYIGYANFMFLGRTWIEDGVIS 330 >gi|161829745|ref|YP_001596892.1| putative permease [Coxiella burnetii RSA 331] gi|161761612|gb|ABX77254.1| putative permease [Coxiella burnetii RSA 331] Length = 370 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 110/332 (33%), Gaps = 3/332 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY K L T L L +I+ N ++ + + + PL++ Sbjct: 2 IVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAA-AGKITVKAVMEIMSLQAPLLL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++P + ++ + E+VI A G+S Q++ +V + +G+ ++ + Sbjct: 61 GYLLPLGLFLGGLLALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLMLSV 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + +++ +K + +S+ Q + G + + Sbjct: 121 EPKMQWYRVKILKDAVATASLEKIVPGRFQLLSSNGQVFYAGGVNDHHQKMLNVFLAQSE 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + AD A Y+ ++ R ++ + + + Sbjct: 181 TAGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRLTSP 240 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + S + +A + + I +PL + L+ +S R + Sbjct: 241 AMDITERVDAMPTSKLWHLHSKD-LKAAAELQWRIAMPLSVWLFALLIVPLSEANPRKGK 299 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 ++ + + + +++ + G++ Sbjct: 300 FAQMLP-AVLIYIGYANFMFLGRTWIEDGVIS 330 >gi|166154182|ref|YP_001654300.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|166155057|ref|YP_001653312.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335427|ref|ZP_07223671.1| putative membrane transport protein [Chlamydia trachomatis L2tet1] gi|165930170|emb|CAP03654.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|165931045|emb|CAP06608.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 366 Score = 50.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 124/363 (34%), Gaps = 8/363 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGE--LPNYSISRGAVLAATRVPL 61 I RY + + A+I I + + G+ + + + +++ L Sbjct: 3 IWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQISL 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + + + + F++ E+++ +A G+S+ L+ P V+ S L+ + Sbjct: 63 KAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLIRPLVISSSLITLLLYANFQ 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EKI + K +K + I ++ N+++ Sbjct: 123 WLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQTVLIFSSINRRAATLNNVFWIKGP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 TI K+ + + + E + K L + F K Sbjct: 183 KTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVSLTQFFDMKEFPELEFSYYDNPFSKIF 242 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAASVS 295 SF ++ + + + FY++++ PL+ +A +++A + Sbjct: 243 ITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIAAVILSAHLC 302 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L F R + + + + + ++ + +L + IP + +++ Sbjct: 303 LRFHRLPKITWAYLVPLGTINIFFVVLKAGMVLANNSVLPALQVMFIPAGFMLLITLYAY 362 Query: 356 LQK 358 + Sbjct: 363 RKL 365 >gi|226320855|ref|ZP_03796407.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 29805] gi|226233721|gb|EEH32450.1| permease, YjgP/YjgQ family [Borrelia burgdorferi 29805] Length = 333 Score = 50.9 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 104/333 (31%), Gaps = 9/333 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 MIL+ + DL E N + + +P + L + NL+ Sbjct: 1 MILIMLGDLFVNLLNYLEK-NIGLKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLSM 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 +E++ + G+ + ++L P ++ SI + + N + LI+ + Sbjct: 60 RNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLVIDTIARRDVLIKNSIGDS-- 117 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 I K + + + + I D K++ R D + A ++ Sbjct: 118 ---RSGDKTIIIRDFAREIYNIKSYDIDENTFANLMIIIKDNKDEFQTRYDINKAEWKDN 174 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI-IKKMSFSNKSN 263 K KL + E+ I +N+ + + + S + K+ Sbjct: 175 KWKLYGIREFVRVDKKIKENAYDVLDGTGIIKLAPDYIRTVMLSSKALNFTKLINWISFL 234 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY--GIFSGFMLYTI 321 F+ L+ + L++ +V + I++ I + Sbjct: 235 KAERLNYSDAFFDLLNRIFFSFRLILLSFTVGFIALALKKNIFILSLLNSIAFAVVYVIS 294 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I I G L A+ I + ++ + Sbjct: 295 IVIFNFLADLGYLHIYIASSFTTIFFLIINFFV 327 >gi|255349243|ref|ZP_05381250.1| putative membrane transport protein [Chlamydia trachomatis 70] gi|255503780|ref|ZP_05382170.1| putative membrane transport protein [Chlamydia trachomatis 70s] gi|255507461|ref|ZP_05383100.1| putative membrane transport protein [Chlamydia trachomatis D(s)2923] gi|289525884|emb|CBJ15366.1| putative membrane transport protein [Chlamydia trachomatis Sweden2] gi|296435470|gb|ADH17648.1| putative membrane transport protein [Chlamydia trachomatis E/150] gi|296439187|gb|ADH21340.1| putative membrane transport protein [Chlamydia trachomatis E/11023] Length = 366 Score = 50.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 124/363 (34%), Gaps = 8/363 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGE--LPNYSISRGAVLAATRVPL 61 I RY + + A+I I + + G+ + + + +++ L Sbjct: 3 IWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQISL 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + + + + F++ E+++ +A G+S+ L+ P V+ S L+ + Sbjct: 63 KAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLICPLVISSSLITLLLYANFQ 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EKI + K +K + I ++ N+++ Sbjct: 123 WLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQTVLIFSSINRRAATLNNVFWIKGP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 TI K+ + + + E + K L + F K Sbjct: 183 KTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVSLTQFFDMKEFPELEFSYYDNPFSKIF 242 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAASVS 295 SF ++ + + + FY++++ PL+ +A +++A + Sbjct: 243 ITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIAAVILSAHLC 302 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L F R + + + + + ++ + +L + IP + +++ Sbjct: 303 LRFHRLPKITWAYLVPLGTINIFFVVLKAGMVLANNSVLPALQVMFIPAGFMLLITLYAY 362 Query: 356 LQK 358 + Sbjct: 363 RKL 365 >gi|332976302|gb|EGK13159.1| permease YjgP/YjgQ [Psychrobacter sp. 1501(2011)] Length = 467 Score = 50.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 42/123 (34%) Query: 40 MGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW 99 + + + +P ++ ++P + ++VF L E+ + GIS Sbjct: 31 IAAEGRLDVGLLFAIIGYNLPYFLELVLPLSFFIGLMLVFGRLYVDQEMAVLNGSGISRG 90 Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ 159 +L + +LL +F + G + ++ QQ + ++ + Sbjct: 91 RLARLMIPFILLLFVFEAGLSLYGKPWGVRNSENIWQQQSLSSAFDLIRPQTFISSDDYH 150 Query: 160 QDI 162 + Sbjct: 151 LYV 153 >gi|297170848|gb|ADI21867.1| hypothetical protein [uncultured verrucomicrobium HF0130_25O04] Length = 243 Score = 50.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 65/232 (28%), Gaps = 8/232 (3%) Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 K + Q + + + + E Sbjct: 14 WYFKEFDETKGQGRGVQVYSYDQNGSDSYRIRAKSATWNENGWLFKEGRFLG-----FPS 68 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNI--PIKMDGFQKFSEQ 243 K + + D + V + V + + + S ++ Sbjct: 69 AKGIPVPKSDGIGIDWEGNPVGFENVEQARASPRINKRFSALFLPLEEDDPFPHAALRQK 128 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 + ++ E+ +S + N Y + + L + L ++ L +S Sbjct: 129 PNTLNYGELGTLLSEYPRQNSAKLYPYKLRRAQLFWSGPSCLVAVLCGLALGLR-RKSTS 187 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 I + + Y T + G+ GI+ A+ +P +L I L+I ++ Sbjct: 188 AGRIAGFSLLGMLFFYLAKTFCDALGEKGIVSEWLASGVPYLLVIILAICLM 239 >gi|319760185|ref|YP_004124123.1| putative permease [Candidatus Blochmannia vafer str. BVAF] gi|318038899|gb|ADV33449.1| putative permease [Candidatus Blochmannia vafer str. BVAF] Length = 371 Score = 50.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 125/355 (35%), Gaps = 10/355 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY K + L L+ ++ L +I +G + + +P + Sbjct: 2 ILIRYIIKEVFRNQLIILILLFLVCICQKLIKI---VGVDNPIPVYLIFLHLTLNIPELG 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + +IPF + + + + +E++ + I+ + + + SI++ I +++ + + Sbjct: 59 KLVIPFSLFLSVFITCYRFHLHNEILAMYSCAINRFFFVKSIFLYSIIVFIISLINVMWL 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + E++ + N K ++ + + FI K +I+ + Sbjct: 119 SPYCEQLRYVTLSSINKNIYSIKLVEKKFLLMLSKHTVFFIKKIKNKNLQYIFIVKKNHH 178 Query: 184 IDKKN----KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 I+ N + D + LK Y+ + + ++ + Sbjct: 179 INGSNVCVIITANNGDVYNYSNNLKAITLKSGTYYEIHYDQLIFTNIYISDFSRYHTLID 238 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 ++ + + F +I++ M+ S + + + + ++ M +IA + + Sbjct: 239 YNMKSPQKGF-KIVEHMTISQLICHDSLPEKYIELNWRFTLLVSIIIMPIIALLLVINI- 296 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 SN + I + + + +++ + ++ +++L+ Sbjct: 297 -SNGYFLNFVLAISLYILFFMLHILLRFSITLDYRDSMLYMGGVNVIYFIIALLM 350 >gi|15834846|ref|NP_296605.1| hypothetical protein TC0226 [Chlamydia muridarum Nigg] gi|270285012|ref|ZP_06194406.1| hypothetical protein CmurN_01128 [Chlamydia muridarum Nigg] gi|270289035|ref|ZP_06195337.1| hypothetical protein CmurW_01183 [Chlamydia muridarum Weiss] gi|301336410|ref|ZP_07224612.1| hypothetical protein CmurM_01205 [Chlamydia muridarum MopnTet14] gi|7190265|gb|AAF39098.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 366 Score = 50.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 122/363 (33%), Gaps = 8/363 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGE--LPNYSISRGAVLAATRVPL 61 I RY + + A+I I + + G+ + + + +++ L Sbjct: 3 IWKRYILARFWLSLSSLFFLAVIFYASIHHSLHAFREGKTAIAGAPLQLSLLYYLSQISL 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + + + + F++ E+++ +A G+S+ ++ P ++ S L+ + Sbjct: 63 KAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTVIRPLILSSTLVTLLLYANFQ 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EKI I K +K + I K N+++ Sbjct: 123 WLHPICEKISITKEHMDKGTLEKAQEKIPALYLKDQTVLIFSSINHKAATLNNVFWIKGP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 TI K+ + + + E + K L + F K Sbjct: 183 KTIYSIKKLAFTTPSLPIGLEVSYFSEDENHEISLTQFFDMKEFPELEFSYYDNPFSKIF 242 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAASVS 295 SF + + + + FY++++ PL+ +A +++A + Sbjct: 243 ITGRDCSFSAFFQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIASVILSAYLC 302 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L F R + + + + + + + +L + IP + + +++ Sbjct: 303 LRFHRLPKITWAYLVPLGTINIFFVFLKAGMVLANNSVLPALQVMFIPASVMLIITLYAY 362 Query: 356 LQK 358 + Sbjct: 363 RKL 365 >gi|297519577|ref|ZP_06937963.1| hypothetical protein EcolOP_18177 [Escherichia coli OP50] Length = 115 Score = 50.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 1/111 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 G+L RY K T + L + L +I + + G+ +Y + VP Sbjct: 4 FGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ-GSYDALGAGMYTLLSVPK 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILL 112 +Q P L+ ++ L + SELV+ +A G + Q+ + +I L Sbjct: 63 DVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPL 113 >gi|225551662|ref|ZP_03772606.1| permease, YjgP/YjgQ family [Borrelia sp. SV1] gi|225371689|gb|EEH01115.1| permease, YjgP/YjgQ family [Borrelia sp. SV1] Length = 333 Score = 50.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 104/333 (31%), Gaps = 9/333 (2%) Query: 25 MILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNR 84 MIL+ + DL E N + + +P + L + NL+ Sbjct: 1 MILIMLGDLFVNLLNYLEK-NIGLKDILYIYYLYLPKAFSDGVALSFLFAISNLIGNLSM 59 Query: 85 TSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDK 144 +E++ + G+ + ++L P ++ SI + + N + LI+ + Sbjct: 60 RNEIIGLFSCGVPLTRILKPIILISIFISVVLFFFDNYLVIDTIARRDVLIKNSIGDS-- 117 Query: 145 QKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYND 204 I K + + + + I D K++ R D + A ++ Sbjct: 118 ---RSGDKTIIIRDLAREIYNIKSYDIDENTFANLMIIIKDSKDEFQTRYDINKAEWKDN 174 Query: 205 KVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEI-IKKMSFSNKSN 263 K KL + E+ I +N+ + + + S + K+ Sbjct: 175 KWKLYGIREFVKVGKKIKENAYDVLDGTGIIKLAPDYIRTVMLSSKALNFTKLINWISFL 234 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAY--GIFSGFMLYTI 321 F+ L+ + L++ +V + I++ I + Sbjct: 235 KSERLNYSDAFFDLLNRIFFSFRLILLSFTVGFIALALKKNIFILSLLNSIAFAVVYVIS 294 Query: 322 ITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I I G L A+ I + ++ + Sbjct: 295 IVIFNFLADLGYLHIYIASSFTTIFFLIINFFV 327 >gi|91204094|emb|CAJ71747.1| hypothetical protein kustc1002 [Candidatus Kuenenia stuttgartiensis] Length = 578 Score = 50.5 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 84/278 (30%), Gaps = 9/278 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL RY + + +T L IL+F+ + +I ++ I L + Sbjct: 53 ILQRYVIREWFQTFWPSFLCFEILMFLGFVIQILHK-----GLDIIALKALIPHMFIQVA 107 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 IP L + + L+ E++ +A GI + +++ P +V I+ FT+++ I Sbjct: 108 PYSIPSALLTATTLTYGRLSADREIIAIQASGIHLRKIITPVLVIGIIFSFFTLVLSAEI 167 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 L ++ +N + + P Q + ++ + Sbjct: 168 LPRSLYQIKLLQERAINNILAGRLATFQKKVLMEPYQIYIGNVVDNINKDVTVIQYADDY 227 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDK----NSTTLNIPIKMDGFQK 239 + + L+K + ++ T G K Sbjct: 228 VTDIIIAEEGSIEVNNEKNTIFLTLRKGEFIKPNYKKAEEVPRLGVFTETTFEIPMGKDK 287 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFL 277 + +++ K + ++ + Sbjct: 288 ADFSTKHMTIFQLFKYNNEIDRELANSKEIPDNFEEAR 325 >gi|167949851|ref|ZP_02536925.1| permease YjgP/YjgQ [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 136 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 40/113 (35%), Gaps = 1/113 (0%) Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 Q +++ ++F ++ + E F+ +V+PL+ + M ++ RS Sbjct: 2 QPHMLPAWDLWAYVAFLKQNG-LSAAQYEVAFWSKLVVPLVTLVMLFLSIPFVFGPLRSV 60 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 V G G + + + G + A P +L + ++ Sbjct: 61 GIGQRVFTGAVVGTLFFMFNRVFTYLGVVYEFNALFTAAFPTLLFLLRGAVVF 113 >gi|222110917|ref|YP_002553181.1| permease yjgp/yjgq family protein [Acidovorax ebreus TPSY] gi|221730361|gb|ACM33181.1| permease YjgP/YjgQ family protein [Acidovorax ebreus TPSY] Length = 363 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 111/333 (33%), Gaps = 11/333 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 K +T L+ + +V + L Q + + S ++ V + I+ Sbjct: 7 IRKELARTFGATLVVLVTVVMTMMLIRTLGQAS-RGSVNPSDVMLVMGFTVLGQLPTILS 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 V + + R SE+VI + G + LL P S + + + + Sbjct: 66 LSLFVTVVGALSRMYRDSEMVIWFSAGRGLMSLLAPLFRFSWPVMLTIAALSLVVWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + +L Q++ D + + + SN + FI + + +++ Sbjct: 126 RQIQELKTQYEQRSDVDRIAPGEFQESSNGSRVFFIDKDAPDANSASNVFIATNEPNRET 185 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 + L + R + + G ++ A+ Sbjct: 186 VTSAQSARLEIRNGERMALLSNGQRLETLRDKPGLRVSEFAEYGTLVGGGSQNDPEAA-- 243 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 K + + R + + + I + L + ++ +V++ R+ + +V Sbjct: 244 ----SIKTRDTWELVSDPQPRHQAELGWRIGMALAALNFVVLGLAVAVVNPRAGRSTSLV 299 Query: 309 AYGIFSGFMLYTIITIMKSF---GKSGILLPVA 338 +F+ + Y ++T+ +++ G+ G+L + Sbjct: 300 F-ALFAFVVYYNLMTVGQTWIGVGRLGLLPFML 331 >gi|121594280|ref|YP_986176.1| permease [Acidovorax sp. JS42] gi|120606360|gb|ABM42100.1| permease YjgP/YjgQ family protein [Acidovorax sp. JS42] Length = 363 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 111/333 (33%), Gaps = 11/333 (3%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIP 68 K +T L+ + +V + L Q + + S ++ V + I+ Sbjct: 7 IRKELARTFGATLVVLVTVVMTMMLIRTLGQAS-RGSVNPSDVMLVMGFTVLGQLPTILS 65 Query: 69 FITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 V + + R SE+VI + G + LL P S + + + + Sbjct: 66 LSLFVTVVGALSRMYRDSEMVIWFSAGRGLMSLLAPLFRFSWPVMLTIAALSLVVWPWAN 125 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 + +L Q++ D + + + SN + FI + + +++ Sbjct: 126 RQIQELKTQYEQRSDVDRIAPGEFQESSNGSRVFFIDKDAPDANSASNVFIATNEPNRET 185 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 + L + R + + G ++ A+ Sbjct: 186 VTSAQSARLEIRNGERMALLSNGQRLETLRDKPGLRVSEFAEYGTLVGGGSQNDPEAA-- 243 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 K + + R + + + I + L + ++ +V++ R+ + +V Sbjct: 244 ----SIKTRDTWELVSDPQPRHQAELGWRIGMALAALNFVVLGLAVAVVNPRAGRSTSLV 299 Query: 309 AYGIFSGFMLYTIITIMKSF---GKSGILLPVA 338 +F+ + Y ++T+ +++ G+ G+L + Sbjct: 300 F-ALFAFVVYYNLMTVGQTWIGVGRLGLLPFML 331 >gi|254514079|ref|ZP_05126140.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR5-3] gi|219676322|gb|EED32687.1| permease YjgP/YjgQ family protein [gamma proteobacterium NOR5-3] Length = 362 Score = 50.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 5/305 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L Y L TL + ++ + + + + R+P ++ Sbjct: 3 LRSYLGSDVLGHTLAVSSVLLAIILTGRFVKYLAEAAS-GKLAAEILLPVMFYRLPGFLE 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 ++P + ++ + L SE+VI A G+ +L + + L+ + + I Sbjct: 62 LLLPLGLFIGILMSYGRLYVESEMVILSACGVGPAKLARFTLAPAFLIMLIVAGLSLFIT 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 G L+ + Q + A I PE Sbjct: 122 PQGAARSEALLNDPQALQGLQLLAAGRF--QPRGDDGTVTYAADIDPEAGDLRQVFLYAP 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + +A + V Y + T ++ F +F + Sbjct: 180 KSADDERAVAGVTVARRGSVVVDEATGARYLELSHGYRFSGTPGRADYRVVSFGQFGQLL 239 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQF--YFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + + + + E + ++ + + LM+ + L+A S+S R Sbjct: 240 PEEPSMARSEPVDAKPTRQLLESRDPEDRAALHWRLSVALMVPIVALLALSLSKTNHRRG 299 Query: 303 QPRII 307 + + Sbjct: 300 RYIKL 304 >gi|71064626|ref|YP_263353.1| hypothetical protein Psyc_0045 [Psychrobacter arcticus 273-4] gi|71037611|gb|AAZ17919.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 416 Score = 50.1 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 1/136 (0%) Query: 27 LVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTS 86 ++ L + N IS + +P ++ I+P + ++VF L Sbjct: 1 MMLGGRLIRYFG-IAAEGNLDISLLFTIIGYNLPYFLELILPLAFFIALMLVFGRLYVDQ 59 Query: 87 ELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQK 146 E+ + A GIS +L + L + + G + ++ QQ Sbjct: 60 EMAVINASGISRGRLGRLMTPLILALFVGEAALSIVGKPWGVRSSENVWQQQALTSAFDL 119 Query: 147 SDIIPWMQISNPQQDI 162 ++ N + Sbjct: 120 IRPNQFISSGNYHLYV 135 >gi|34557088|ref|NP_906903.1| hypothetical protein WS0675 [Wolinella succinogenes DSM 1740] gi|34482803|emb|CAE09803.1| conserved hypothetical protein [Wolinella succinogenes] Length = 345 Score = 50.1 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 41/353 (11%), Positives = 104/353 (29%), Gaps = 17/353 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y F + + + VI + + S L +P +I Sbjct: 4 LKKYLFGSFAQLFFPIFAVLFFISSVILFI-KIAGVTFVVKMSFGELFELYLYSLPTMIF 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IP +++ L++ EL + ++GI + F S+L+ +F +LV + Sbjct: 63 FTIPVTFFSASVISLAKLSQEYELPVLFSLGIDPLRFSRLFFPLSLLVSLFLLLVSLALV 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + K +I + ++ + E + Sbjct: 123 PLSNEAYDRFL-----DHKKSSVNINLKPAEFGQKLGNWLVYVGDMDEGEKRYKEVVMFS 177 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 A A++ + + L+ + + + ++ + F E Sbjct: 178 SNDLGRESFILAKEALVESMEGNLELKLFRGSAYFKEELHIKRVDYAQMLIRDSAFKEGG 237 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 AS K+ + + R + + + PL + + + + R + Sbjct: 238 ASLGIMGYWKQ-ALGGEKGSDKVRRKLSSSILISLFPLASLFFIPL---LGIMHPRFQKN 293 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I +G + P+A + ++ + + + + Sbjct: 294 YSYFYVIIATGIFYGLVHIASNHL-------PLAGIFLIPLIWLGVGYGLYRR 339 >gi|330982633|gb|EGH80736.1| hypothetical protein PSYAP_29478 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 204 Score = 49.7 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 64/203 (31%), Gaps = 4/203 (1%) Query: 158 PQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYG 217 +Q + N + T D + ++ A A D +LK V + Sbjct: 1 HRQGDEFIHINTVQPNGLMLGVTRYRFDDQRHMLTSSFAKEAHFKTDYWELKDVATTHFN 60 Query: 218 RIPIDKNST---TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 + +T ++ + S S + + N R F Sbjct: 61 DGSTEVVNTPVERWDVALSPQLLSTVIMPPESLSISGLWSYAHYLADQG-LSNGRYWLAF 119 Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + ++ P + VA+ L+A S RS V G+ GF I ++ Sbjct: 120 WTKVLQPAVTVALVLMAISFIFGPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGF 179 Query: 335 LPVAAALIPVILTISLSILILLQ 357 P+ A L+P IL+L + Sbjct: 180 PPLLAVLLPAAACALAGILLLRR 202 >gi|308189157|ref|YP_003933288.1| hypothetical protein Pvag_3723 [Pantoea vagans C9-1] gi|308059667|gb|ADO11839.1| Uncharacterized protein [Pantoea vagans C9-1] Length = 204 Score = 49.7 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 1/189 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ L L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVD-GEVPTNLVLTLLGLGVPQMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+S L+ +V + + + + + Sbjct: 61 QLILPLSLFLAILMTLGRLYTESEITVMHACGLSKAVLVKAAMVLMLFTSVVAAVNVIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ Q K N + S+ +F+ K +++ Sbjct: 121 GPWSSRYQDEVTQNAKANPGAAAMAAGQFQTSSDGSAVLFVEDVKGNNFGNVFLAQLRPK 180 Query: 184 IDKKNKIIH 192 + + Sbjct: 181 GNARPSWCW 189 >gi|148244590|ref|YP_001219284.1| hypothetical protein COSY_0441 [Candidatus Vesicomyosocius okutanii HA] gi|146326417|dbj|BAF61560.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 357 Score = 49.7 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 102/346 (29%), Gaps = 4/346 (1%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 + L + ++VF L + + E + L + I I+ Sbjct: 2 RNTLVILSAVFIVISLVVFGNQLVVVVKESLE-EGIPVKDLLPLVGFNMIRDIVPILSLS 60 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKI 130 L+ I+ L + SE VI ++G++ + I++ I V++ + ++ Sbjct: 61 LLLAIILSINKLYKNSEAVIMNSLGLNNKHFMVFIQPLVIVIVIVIVILTTVVVPWSKQQ 120 Query: 131 GIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPE--NHIWEDFTSITIDKKN 188 +I K+ + + N F E T Sbjct: 121 KDLIINHSKNISKFSFIKEREFQEFKNGDIIFFASKVSNFNNSKEQNMEGIFIYTFINNE 180 Query: 189 KIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRS 248 +I + + ++ ++ + + Q Sbjct: 181 PVIILAKQAKKYTNLNTNSVYLRLKNGTNYHGFILDTKKKILNFNLYDIQIIDGNMKKLI 240 Query: 249 FYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIV 308 I + + + +F + I PL ++ ++ + + S++ + V Sbjct: 241 SKVIKVESKSTFELFFSRKLTEIAEFQWRISQPLSILILSALGVLLG-RTSQNGGRNLGV 299 Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 G+ + + I KS + G LP+ ++ + L + Sbjct: 300 LIGVVVFILYNNALLISKSVLERGESLPIIGLWWVHLVMLLLIFIF 345 >gi|297518682|ref|ZP_06937068.1| hypothetical protein EcolOP_13658 [Escherichia coli OP50] Length = 80 Score = 49.3 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 35/79 (44%) Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 PL + M L+A S RS + V GI GF+ Y + I + P+ Sbjct: 1 QPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIG 60 Query: 340 ALIPVILTISLSILILLQK 358 AL+P +S+ +L++K Sbjct: 61 ALLPSASFFLISLWLLMRK 79 >gi|237805191|ref|YP_002889345.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231273491|emb|CAX10407.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] Length = 366 Score = 49.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 124/363 (34%), Gaps = 8/363 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGE--LPNYSISRGAVLAATRVPL 61 I RY + + A+I I + + G+ + + + +++ L Sbjct: 3 IWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAISRAPLQLSLLYYLSQISL 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + + + + F++ E+++ +A G+S+ L+ P V+ S L+ + Sbjct: 63 KAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLIRPLVISSSLITLLLYANFQ 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EKI + K +K + I ++ N+++ Sbjct: 123 WLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQTVLIFSSINRRAATLNNVFWIKGP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 TI K+ + + + E + K L + F K Sbjct: 183 KTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVSLTQFFDMKEFPELEFSYYDNPFSKIF 242 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAASVS 295 SF ++ + + + FY++++ PL+ +A +++A + Sbjct: 243 ITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIAAVILSAHLC 302 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L F R + + + + + ++ + +L + IP + +++ Sbjct: 303 LRFHRLPKITWAYLVPLGTINIFFVVLKAGMVLANNSVLPALQVMFIPTGFMLLITLYAY 362 Query: 356 LQK 358 + Sbjct: 363 RKL 365 >gi|152993423|ref|YP_001359144.1| hypothetical protein SUN_1840 [Sulfurovum sp. NBC37-1] gi|151425284|dbj|BAF72787.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 341 Score = 49.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 98/341 (28%), Gaps = 18/341 (5%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + K L + +++ ++ L + + + +L + +P II I Sbjct: 7 YISSNFTKAFLTIFIPFFLIISLVYLV-KISSLTAQIQINFLELLLLYSYSLPNIIFYTI 65 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P + L++ +EL+ A+G+ ++L ++ IL + + Sbjct: 66 PLSFIAAVTNTLMKLSQDNELIALYALGLKAKKVLRSILLLGILFSVLLSTLSFLGIPIS 125 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 +++ ++ + +IIP +K + K Sbjct: 126 KQLYNAFKEK---KKTEATLNIIPGKLGQKFGDYYIYVKEKDEKSKLFHDMVIYNRTKKD 182 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + L Y Y D QK+ F Sbjct: 183 AEQFFSSKQGQLNRDKLVASLLLKEGYGYTYTKNKLQQAKYKSLEVFDSKQKYRFHFQDI 242 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 Y +R ++L V + ++++ L+AA + I Sbjct: 243 VSYW---------ALIKTDKHRMGRALFYLFVSLIPILSVYLVAAFAMINPRYQANYSFI 293 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTI 348 + + I + I S K G + + I + + Sbjct: 294 IIFSITLS-----LYLIASSLEKWGDIPALILTAIVIFIFG 329 >gi|78777193|ref|YP_393508.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] gi|78497733|gb|ABB44273.1| permease YjgP/YjgQ [Sulfurimonas denitrificans DSM 1251] Length = 339 Score = 49.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 109/357 (30%), Gaps = 24/357 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 I+ Y + L L + ++ L + +I A L +P Sbjct: 1 MKIVQNYIRESVSILFLSIFLPLFSIASIVFLI-KLATYTAVIQLTIFEMAKLFFFMLPE 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ +P V + F L+ +E+V+ A+GI ++ + ++ L + Sbjct: 60 LLFYTLPISFFVAITLALFKLSNDNEIVVLFALGIRPKLIIKTVLKPALFLCAILLFNFF 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + K ++ + ++ +N + D Sbjct: 120 VLFPH-----AKTLSSNFISYKKSEAKFNLSASEFGHKFGEWLLYIGKDNQNETYSDVIL 174 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + +++ R I + ++LK Y D + Sbjct: 175 FNKKQDEEVLIRAKNAQIINDSGILRLKLTSGEGYSYSDEKFTQINFETMFINDTMKTDL 234 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 +++ + Y + + + + I+ L V +AA++ + +R Sbjct: 235 DKYETPMEYWLPE----------APSSKKRKMLISNILFSLFPVLSIFLAATIGIVHARH 284 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + +I + + + + L+ + AL+ + L IL +K Sbjct: 285 QKGKIYLFMFLGIILYY--------TLAVTLQLIIGSYALLVLAFGWLLGTYILYKK 333 >gi|15605573|ref|NP_220359.1| hypothetical protein CT838 [Chlamydia trachomatis D/UW-3/CX] gi|76789583|ref|YP_328669.1| hypothetical protein CTA_0914 [Chlamydia trachomatis A/HAR-13] gi|237803270|ref|YP_002888464.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|255311679|ref|ZP_05354249.1| putative membrane transport protein [Chlamydia trachomatis 6276] gi|255317980|ref|ZP_05359226.1| putative membrane transport protein [Chlamydia trachomatis 6276s] gi|3329309|gb|AAC68435.1| hypothetical protein CT_838 [Chlamydia trachomatis D/UW-3/CX] gi|76168113|gb|AAX51121.1| hypothetical protein CTA_0914 [Chlamydia trachomatis A/HAR-13] gi|231274504|emb|CAX11300.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|296436394|gb|ADH18568.1| putative membrane transport protein [Chlamydia trachomatis G/9768] gi|296437325|gb|ADH19495.1| putative membrane transport protein [Chlamydia trachomatis G/11222] gi|296438253|gb|ADH20414.1| putative membrane transport protein [Chlamydia trachomatis G/11074] gi|297140754|gb|ADH97512.1| putative membrane transport protein [Chlamydia trachomatis G/9301] gi|297748966|gb|ADI51512.1| Hypothetical protein CTDEC_0838 [Chlamydia trachomatis D-EC] gi|297749846|gb|ADI52524.1| Hypothetical protein CTDLC_0838 [Chlamydia trachomatis D-LC] Length = 366 Score = 49.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 124/363 (34%), Gaps = 8/363 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGE--LPNYSISRGAVLAATRVPL 61 I RY + + A+I I + + G+ + + + +++ L Sbjct: 3 IWKRYLLSRFWISLSSLFFLAVIFYASIHHSLHAFREGKTAISRAPLQLSLLYYLSQISL 62 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 + I+P + + + + F++ E+++ +A G+S+ L+ P V+ S L+ + Sbjct: 63 KAEFILPQLVAIASTITLFSMQSKREILLLQASGLSLKTLIRPLVISSSLITLLLYANFQ 122 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + EKI + K +K + I ++ N+++ Sbjct: 123 WLHPICEKISVTKEHMDKGTLEKAQEKIPALYLKDQTVLIFSSINRRAATLNNVFWIKGP 182 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 TI K+ + + + E + K L + F K Sbjct: 183 KTIYAIKKLAFTTPSLPIGLEVSYFSEDENHEVSLTQFFDMKEFPELEFSYYDNPFSKIF 242 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQ------FYFLIVIPLMLVAMTLIAASVS 295 SF ++ + + + FY++++ PL+ +A +++A + Sbjct: 243 ITGRDCSFSAFLQAIPWHAAKFGLLTTVPQRILSLLTLFYYMLISPLLCIAAVILSAHLC 302 Query: 296 LEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 L F R + + + + + ++ + +L + IP + +++ Sbjct: 303 LRFHRLPKITWAYLVPLGTINIFFVVLKAGMVLANNSVLPALQVMFIPAGFMLLITLYAY 362 Query: 356 LQK 358 + Sbjct: 363 RKL 365 >gi|313682233|ref|YP_004059971.1| permease yjgp/yjgq family protein [Sulfuricurvum kujiense DSM 16994] gi|313155093|gb|ADR33771.1| permease YjgP/YjgQ family protein [Sulfuricurvum kujiense DSM 16994] Length = 340 Score = 49.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 108/340 (31%), Gaps = 16/340 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY L + VI + + ++S A L VP ++ Sbjct: 4 LRRYILSNLSILFFSIFLPLFAIASVIFMI-KLATYTAVIQITLSEMAKLYLFVVPELLF 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P +V + + L+ +E+V+ ++GIS + V ++LL + + + Sbjct: 63 YTLPIAFVVGGALALYRLSNDNEMVVVFSLGISPLFVARILAVPALLLSLLLFVNFVVVT 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + I + +++ + + I P++ ++ D Sbjct: 123 PYIKIISANFLEKKRAEAKFNLGASEFGHHFGDWMLFINKN----DPQSRVFGDVILFNK 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K++I+ + D I ++L+ Y I + D Sbjct: 179 SMKDEILIKADKAELINKQGVLQLRLDNGVSYSYDNILLRTMLFKTGYINDK-------- 230 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S ++ + + +N R +F ++ L + + ++ + +R + Sbjct: 231 --LSTDPMVYRNTLDYWTNNELRERKTQRFITNTLLSLFPLISVFLMIALGIVHARHQKR 288 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 I + S Y I + + + V + + Sbjct: 289 WIYLWL-FLSIVGFYAAAIITQQWLGFHTIWVVTLVWLII 327 >gi|289805150|ref|ZP_06535779.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 83 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%) Query: 277 LIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 PL + M L+A S RS + V GI GF+ Y + I + P Sbjct: 1 YFPSPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPP 60 Query: 337 VAAALIPVILTISLSILILLQK 358 + AL+P +S+ ++L+K Sbjct: 61 IVGALLPSASFFLISLWLMLRK 82 >gi|270295684|ref|ZP_06201885.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274931|gb|EFA20792.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 617 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/256 (12%), Positives = 75/256 (29%), Gaps = 4/256 (1%) Query: 17 TLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNI 76 + + + + L ++M ++ A ++ +P L+ + Sbjct: 3 FMGTFFICLFIFMMQFLWRYVDEMVGK-GLEMTVLAQFFFYSALSLVPASLPLAILLAAL 61 Query: 77 VVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQ 136 + F N EL+ +A GIS+ +++ P ++ + + N I + L+ Sbjct: 62 ITFGNFGERFELLAMKAAGISLLKIMRPLIIFICFICCVSFYFQNVIGPKAQTKLWTLLI 121 Query: 137 QWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDA 196 K + + + + + + D +K + + Sbjct: 122 SMKQKSPEVDIPEGVFYDEIDGYNLYVKHKNR---KTGMLYDVLIYNFEKGFENAQIIKS 178 Query: 197 DLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 D + K + G + S +N + F E+ A F + Sbjct: 179 DSGRLEMTADKQHLYLHLYSGEQFENLKSQNMNQRNVPYRRETFREKHAIIEFNSDFNMV 238 Query: 257 SFSNKSNIFHNYRAET 272 SN ++ Sbjct: 239 DAGIMSNQSNSKDMRM 254 Score = 39.7 bits (90), Expect = 0.71, Method: Composition-based stats. Identities = 24/240 (10%), Positives = 62/240 (25%), Gaps = 9/240 (3%) Query: 118 LVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 + + + + N D D +SN + + ++ + Sbjct: 209 NMNQRNVPYRRETFREKHAIIEFNSDFNMVDAGI---MSNQSNSKDMRMLQADIDSMKLQ 265 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 + + K + ++ D +K++K + +S + Sbjct: 266 NDSVGRGYYKEAMAGTYKVTASLSKEDTLKIEKA-----YLGEYNVDSLYNVATLMQKQK 320 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLE 297 + + S SF+ R T ++ + + L + I A + Sbjct: 321 VISTAVSRAESAGSDWSFKSFNISQTESSLRRHMTSWHEKLTLSLACLIFFFIGAPLG-G 379 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 R + V + + Y I + G + + L + + Sbjct: 380 IIRKGGLGMPVVVSVLIFIIYYIINNTGYKMARDGQWVVWMGMWTSTAVLAPLGAFLTYK 439 >gi|254457924|ref|ZP_05071351.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] gi|207085317|gb|EDZ62602.1| permease YjgP/YjgQ [Campylobacterales bacterium GD 1] Length = 339 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/338 (9%), Positives = 91/338 (26%), Gaps = 17/338 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y L + + VI + + ++ L +P I+ Sbjct: 4 LRKYIINNLYMIFLSMFMPLFAIASVIFMI-KLATYTAVIQLTLWDMVKLYLFVLPEILF 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + + F L+ +E+V+ A+GI ++ + LL + + Sbjct: 63 YTLPLTFFIAATLSLFRLSTDNEMVVLFALGIHPKFIIKTLFKPAALLSALLMFNFLVLF 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + K S + I +D + T Sbjct: 123 PHATTLSSNFVSYKKSEAKFNLSASEFGHSFGDWLLY-------------IGKDNENETY 169 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K ++ I + + I + S + ++D + Sbjct: 170 SDVILFNKNKKEEIIISAKRAEIINDAGILRLKLIEGEGYSYSKEEFSQIDFDTMYINDT 229 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + ++ + L+ + ++ +++ V + + Sbjct: 230 MRTDLAVYRTPLEYWLSNDRKESKTHMMITDTLLSLFPLISLFLVVSIGVVHVRHQKGRI 289 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + + G+ Y ++ + V + Sbjct: 290 YLYLFLGVLL---YYGATLGLQKSLVYYTIPTVVITWL 324 >gi|154148987|ref|YP_001406533.1| YjgP/YjgQ permease [Campylobacter hominis ATCC BAA-381] gi|153804996|gb|ABS52003.1| putative permease, YjgP/YjgQ family [Campylobacter hominis ATCC BAA-381] Length = 340 Score = 48.9 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 43/350 (12%), Positives = 104/350 (29%), Gaps = 26/350 (7%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 +Y F +L T +++ +I ++ ++ L +P I+ Sbjct: 6 KYLFSNFLSTFASLFSTLFLIMSIIFFL-QIARITSFVEINLYELTKLYLFMLPRILIFT 64 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 IP V + F L++ +E ++ +G S ++ F+ + ++ + +L+ + Sbjct: 65 IPISFFVALAMSLFRLSKENETIVLFTLGYSSEKIARFFLFLAFIVSVSMLLISLFMMPL 124 Query: 127 GEKIGIDL--IQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 E + + ++ N + + S+ D ++ Sbjct: 125 AENLKDNFVSYKKISANLNIKSSEFGQKFSDWLVFIDDQKETNTGSIYENLILYHPKNKT 184 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + I+ N +KLK Y + I + + Sbjct: 185 SDERIILASSGEIANENSNFSLKLKNGKAYTNDEKKWHISYFDELIIRTVQKDKIKENGG 244 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 N + + + + + + PL + A S + R + Sbjct: 245 I------------LGYWKNEKNASKQLSIYVLVSLFPLASIYF---AVSFGIVTYRYEKG 289 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 I + F + +I I P+ A + + + LS + Sbjct: 290 FIYIGI-FGVLFCYFAMIMIFAK-------QPLLAIPLTFFIFLILSYIF 331 >gi|269963274|ref|ZP_06177606.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269831989|gb|EEZ86116.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 235 Score = 48.5 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/158 (10%), Positives = 48/158 (30%), Gaps = 3/158 (1%) Query: 198 LAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMS 257 + + +L + + + F ++ R + + Sbjct: 57 MFSSSGEVKELSDGRQIITMHEGTRYEGVPTRVEYMVTKFDQYEGVIGQREVKQKGRDWE 116 Query: 258 FSNKSNIFHNYRAETQF--YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSG 315 +++ + E Q + I + + + +T++ +S R + + I Sbjct: 117 AYPTADLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGRFAK-MGPAILIY 175 Query: 316 FMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + I+ KS + G + + + ++IL Sbjct: 176 LAYFLAISATKSALEDGAIPATIGMWPINAMLLIVAIL 213 >gi|319941842|ref|ZP_08016164.1| hypothetical protein HMPREF9464_01383 [Sutterella wadsworthensis 3_1_45B] gi|319804775|gb|EFW01642.1| hypothetical protein HMPREF9464_01383 [Sutterella wadsworthensis 3_1_45B] Length = 379 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 29/351 (8%), Positives = 103/351 (29%), Gaps = 13/351 (3%) Query: 10 FKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPF 69 L ++ V ++ M + L + + ++ Sbjct: 11 LANLAGAVFTVLFTIVLAVAMVRFL----NMAAGGSIEHGTVVQLVLYNALVNLPPLLAA 66 Query: 70 ITLVVNIVVFFNLNRTSELVISRAI-GISIWQLLNPFVVGSILLGIFTVLVINPIATSGE 128 + ++ + +E+V+ + G SI + P V ++ + + L+ I+ Sbjct: 67 SLFIATLMTLMRSWQDNEMVVWFSSGGRSILSWIEPTVKFALPIVVVIALLSIVISPWAR 126 Query: 129 KIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKN 188 L D +++ ++ F+ + + K++ Sbjct: 127 AETDRLRNSVSAREDVNAIAPGRFIEAMGGKRVFFVESAEEGGNQVRNVFMAEGDWGKES 186 Query: 189 KII-HRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + + ++ + V L Y+ + +++ Sbjct: 187 VVTAEKGTIEVNAEGDRYVVLGNGRRYEAQTDSGKTRIVEFGSYGVRLDIRIDRAFASTK 246 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + I + + + + P + + L+A +S R+ + + Sbjct: 247 TSSMPIALL------IASPTPDHQAELLWRFSWPAAALLLALLAIPLSCTSPRAGR-SLN 299 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + ++I+++ + L + + + L++++ +++ Sbjct: 300 LLMAALVFILYLNALSIVETKIEQQALTFWSGYTVLNGSLLILTVVLFIRR 350 >gi|109947019|ref|YP_664247.1| hypothetical protein Hac_0413 [Helicobacter acinonychis str. Sheeba] gi|109714240|emb|CAJ99248.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 356 Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 99/341 (29%), Gaps = 7/341 (2%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY F + F L + ++ L + + S L +P I I Sbjct: 15 RYLFMAVSQVFFSFFLVLFFISSIVLLIS-IASVTLVIKVSFLDLVQLFLYSLPGTIFFI 73 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 +P + L+ EL++ ++G+S ++ FV SIL+ ++ + + Sbjct: 74 LPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAFVPLSILVSAILLVFSLVLIPT 133 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + + Q KD D +++ + +++ + Sbjct: 134 SKSAYYGFLHQKKDKIDINIRVGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQE 191 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + + + + + K + G + L++ K+ F + Sbjct: 192 SFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKIDFEELHLRNKLKSFNANDASYLQ 251 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + Y K +F +N R I++ L +A + + R Sbjct: 252 GTDYLGYWKRAFGKSANKSQKRRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWS 307 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 G + I + P A +L Sbjct: 308 YFYVLGAVGIYFLMVHVISTDLFLMTFIFPFIWAFASYLLF 348 >gi|209363910|ref|YP_001424259.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] gi|207081843|gb|ABS76872.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] Length = 372 Score = 48.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 112/335 (33%), Gaps = 3/335 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I++RY K L T L L +I+ N ++ + + +VP Sbjct: 1 MSVIVFRYLCKEILGTLLATTLILLIIFMTNQFVHYLNDAA-AGKITVKAVMEIMSLQVP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 L++ ++P + + + E+VI A G+S Q++ +V + +G+ ++ Sbjct: 60 LLLGYLLPLGLFLGGLFALGRMAVDHEMVILTACGVSRAQIVGMLIVLATFIGVIVAWLM 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + + + +++ +K + +S+ Q + G + + Sbjct: 120 LSVEPKMQWYRVKILKDAVATASLEKIVPGRFQPLSSNGQVFYAGGVNDHHQKMLNVFLA 179 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + AD A Y+ ++ R ++ + + Sbjct: 180 QSETAGGKQRWDLVSADQAGEYSTAKGENFILFKNGFRYVGIPGELKYDVMKFGEYGIRL 239 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + S + +A + + I +PL + L+ S+S R Sbjct: 240 TSPAMDITGRVDAMPTSKLWHLHSKD-LKAAAELQWRIAMPLSVWLFALLIVSLSEANPR 298 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + ++ + + + +++ + G++ Sbjct: 299 KGKFAQMLP-AVLIYIGYANFMFLGRTWIEDGVIS 332 >gi|329890121|ref|ZP_08268464.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] gi|328845422|gb|EGF94986.1| hypothetical protein BDIM_18180 [Brevundimonas diminuta ATCC 11568] Length = 342 Score = 48.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/322 (11%), Positives = 103/322 (31%), Gaps = 5/322 (1%) Query: 39 QMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISI 98 ++ S+ L +P +I I+P V ++ L R EL + A G+S Sbjct: 2 EVIVERGQSVWVMVKLTLLALPQLIAVILPIGLFVGALIALTRLQREQELTAAYAAGVSR 61 Query: 99 WQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNP 158 W L+ P + ++++ + ++LV + ++ G + + + ++Q + Sbjct: 62 WALIRPALQIALIVTVISLLVNVFVQPWAQREGRRQAFAIRTDLAALLVEEGRFVQGPDG 121 Query: 159 QQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEY--QY 216 ++ +++ + + + + ++ + Y + Sbjct: 122 LTVYVQQIEQNGLMKNLFVYLDNGKTVTTWDAETARFGRVDGLPVLTMQNGSMQRYSSRE 181 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM-SFSNKSNIFHNYRAETQFY 275 + + ++ ++ + + ++ + + AE Sbjct: 182 VLNQLSFDQQVFDLSPYAKTSERIRFKPSDLWLTDLFDPTPALLETAGTRGELAAEGHSR 241 Query: 276 FLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL 335 + + +AA + FSRS I + ++ +G L Sbjct: 242 LASPLYALAAMAFALAAILGGAFSRSGYAGRIARAAGAFLVLRVIGYGLVAGSAWNGALN 301 Query: 336 PVAAALIPVILTISLSILILLQ 357 + + + L++ IL + Sbjct: 302 VLQ--YVVPLAATFLALRILFR 321 >gi|330443789|ref|YP_004376775.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] gi|328806899|gb|AEB41072.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] Length = 357 Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 56/363 (15%), Positives = 116/363 (31%), Gaps = 10/363 (2%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKT L+ + + + L EI + + + + LAA ++P Sbjct: 1 MP-ILWKVLIFRYLKTILFCASSLIFISIISSLQEIVVYIAK--DVPYATVFRLAAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ RA G S ++ P + SI + Sbjct: 58 YLLPFILPASCFISAYTLFKGLSDNNQITFLRASGASQGIIIFPILTISIAICCANFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + + S + AK + Sbjct: 118 SELASICRYKSCKEIANMAMSSPPLLLQTLQKREDSRVFIAVDHFAKSKFDNVIVALKRD 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 D D D V+ K VV + T+ ++ Q+ Sbjct: 178 DTISDVGIIKAIIPD-----SEADTVQAKDVVYISKLPSSLSTPYTSPAQEYYIETVQEL 232 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + + + M + + + I L A+ L+ +++ Sbjct: 233 LIPKVTATLFSGKSFMKSRTDYLTWKQLVRQAFYRTYIPETLRRAAIGLLCFTLTYSGIV 292 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI--LLPVAAALIPVILTISLSILILLQK 358 + F F + ++ GK+ + L P I++ + I ++ Sbjct: 293 IGTYKPRFRKTHFLYFTFPILDLVLLIVGKNTKTTFMAFMFFLFPQIISWLVFIYRSYRE 352 Query: 359 EDG 361 G Sbjct: 353 NRG 355 >gi|11465471|ref|NP_045138.1| hypothetical protein CycaCp121 [Cyanidium caldarium] gi|6466374|gb|AAF12956.1|AF022186_79 unknown [Cyanidium caldarium] Length = 397 Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 40/374 (10%), Positives = 103/374 (27%), Gaps = 28/374 (7%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL Y FK + L+ + + + + + + +PL Sbjct: 24 ILDSYLFKSLVLPFLFCWVSFVFIELSVGCVNQL-MSDLSSGLPLEISLQILLLYLPLYA 82 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +P + ++ F N +++L+ IS +L ++ + + T + I Sbjct: 83 YFALPITSFFSGLISFRIKNYSNQLLGVYITSISFSRLFRSVLIFTSAICGTTWCISEII 142 Query: 124 ATSGEKIGIDLIQQ-----------------------WKDNGDKQKSDIIPWMQISNPQQ 160 L ++ + K Sbjct: 143 IPVSSNSLQVLHRKASLCARNSICSETSSGIFTNYYNSQSKKAPLKELKGVLYIKHFNHL 202 Query: 161 DIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIP 220 + + ++ + F + + + + ++ I D K V + Sbjct: 203 NAYQLIYLDFNNENLKQLFLADSAKFDHFSRNWLFENMHIFSFDYDKELFVDSFNINMNL 262 Query: 221 IDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVI 280 + + L + ++ Q + S + + + Sbjct: 263 CNLSILDLKLNAVINKSQFSPFWMNAASIKMY----KELSHLKTYSKSWRKLSLRLYQKY 318 Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 + ++ L + + R + GI F Y + +S GI+ + Sbjct: 319 FTPISSIFLYSTGALMGSFRYKTQYLSFFIGILIAFQFYLSTFVTESAVILGIIPIYFSF 378 Query: 341 LIPVILTISLSILI 354 ++P LT+ L +++ Sbjct: 379 IVPTSLTVILLLVL 392 >gi|15605574|ref|NP_220360.1| hypothetical protein CT839 [Chlamydia trachomatis D/UW-3/CX] gi|76789584|ref|YP_328670.1| permease [Chlamydia trachomatis A/HAR-13] gi|237803271|ref|YP_002888465.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|237805192|ref|YP_002889346.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|255311680|ref|ZP_05354250.1| putative membrane transport protein [Chlamydia trachomatis 6276] gi|255317981|ref|ZP_05359227.1| putative membrane transport protein [Chlamydia trachomatis 6276s] gi|3329310|gb|AAC68436.1| hypothetical protein CT_839 [Chlamydia trachomatis D/UW-3/CX] gi|76168114|gb|AAX51122.1| predicted permease [Chlamydia trachomatis A/HAR-13] gi|231273492|emb|CAX10408.1| putative membrane transport protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274505|emb|CAX11301.1| putative membrane transport protein [Chlamydia trachomatis B/Jali20/OT] gi|296436395|gb|ADH18569.1| putative membrane transport protein [Chlamydia trachomatis G/9768] gi|296437326|gb|ADH19496.1| putative membrane transport protein [Chlamydia trachomatis G/11222] gi|296438254|gb|ADH20415.1| putative membrane transport protein [Chlamydia trachomatis G/11074] gi|297140755|gb|ADH97513.1| putative membrane transport protein [Chlamydia trachomatis G/9301] gi|297748967|gb|ADI51513.1| Predicted permease [Chlamydia trachomatis D-EC] gi|297749847|gb|ADI52525.1| Predicted permease [Chlamydia trachomatis D-LC] Length = 354 Score = 47.8 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 116/358 (32%), Gaps = 13/358 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKTT++ L + + + L EI + + + + + + A ++P Sbjct: 1 MP-ILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIAK--DVPYATVFKVTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S ++ P ++ S +L F Sbjct: 58 YLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASGVLCCFNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + I K I Sbjct: 118 SELASICRFQTGKEIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVVIALKHN 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D + + V + + + N L + + Sbjct: 178 QEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEFYLETLDEFLIPKIT 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + FA +S+ + K I + I I L+ MT ++ R Sbjct: 238 ATLFAGKSYMKTRTDY-LPWKQLIQDARLHLAEILRRIAIGLLCSTMTFSGLALGTYKPR 296 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI--LLPVAAALIPVILTISLSILILL 356 +P + + + I GK+ I + V L P +L+ + + Sbjct: 297 FRKP-------VLIYALFPILNLIFLIVGKNTIHPISAVMLFLFPQLLSWLIFSWRIY 347 >gi|295917939|gb|ADG60246.1| permease YjgP/YjgQ [uncultured bacterium] Length = 122 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 1/102 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 + RY + L + A L+ + + + + + + VP Sbjct: 22 IDRYILRLVLVPMFGVFILAASLLMLEKMLRLFEFVSTQGG-PVQVVFRMLVNLVPEYAG 80 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFV 106 IP ++ ++ F L +SEL + RA+G+S +LL Sbjct: 81 LAIPLGLMLGILLAFRKLATSSELDVMRAVGMSYSRLLRVPY 122 >gi|255349244|ref|ZP_05381251.1| putative membrane transport protein [Chlamydia trachomatis 70] gi|255503781|ref|ZP_05382171.1| putative membrane transport protein [Chlamydia trachomatis 70s] gi|255507462|ref|ZP_05383101.1| putative membrane transport protein [Chlamydia trachomatis D(s)2923] gi|289525885|emb|CBJ15367.1| putative membrane transport protein [Chlamydia trachomatis Sweden2] gi|296435471|gb|ADH17649.1| putative membrane transport protein [Chlamydia trachomatis E/150] gi|296439188|gb|ADH21341.1| putative membrane transport protein [Chlamydia trachomatis E/11023] Length = 354 Score = 47.4 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 116/358 (32%), Gaps = 13/358 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKTT++ L + + + L EI + + + + + + A ++P Sbjct: 1 MP-ILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIAK--DVPYATVFKVTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S ++ P ++ S +L F Sbjct: 58 YLLPFILPVSCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASGVLCCFNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + I K I Sbjct: 118 SELASICRFQTGKEIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVIIALKHN 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D + + V + + + N L + + Sbjct: 178 QEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEFYLETLDEFLIPKIT 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + FA +S+ + K I + I I L+ MT ++ R Sbjct: 238 ATLFAGKSYMKTRTDY-LPWKQLIQDARLHLAEILRRIAIGLLCSTMTFSGLALGTYKPR 296 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI--LLPVAAALIPVILTISLSILILL 356 +P + + + I GK+ I + V L P +L+ + + Sbjct: 297 FRKP-------VLIYALFPILNLIFLIVGKNTIHPISAVMLFLFPQLLSWLIFSWRIY 347 >gi|330890525|gb|EGH23186.1| hypothetical protein PSYMO_17668 [Pseudomonas syringae pv. mori str. 301020] Length = 146 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%) Query: 266 HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM 325 R+ + + I +PL + +TL+A +S R + + + I I+ + Sbjct: 35 PAPRSVAELQWRISLPLSVFIVTLMAIPLSRVNPRQGRY-LKLLPAILLYMSYLAILISV 93 Query: 326 KSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +S + G L + +S+ +L+ Sbjct: 94 RSSLEKGKLPLSLGMWWVHGIYLSIGLLLFYW 125 >gi|188996313|ref|YP_001930564.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931380|gb|ACD66010.1| permease YjgP/YjgQ family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 336 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 105/348 (30%), Gaps = 22/348 (6%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K + K + + +++ L + + + S+ L Sbjct: 1 MKILDKYLIKLFFKNFILLIGLFSLIITSSQLLHLPSFAYSMNIIDFSKLLFLIDI---S 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ + F + ++V +L +E+ + GIS QLL P + +++ I + Sbjct: 58 FIKYQLLFAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFST 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I S + + + + + KI ++ + Sbjct: 118 VIVPSANRERYKFLTYKVKSYILENVSPKNF--------------SKINDNVSVYVEKKE 163 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 I + + L ++ + S IK + + Sbjct: 164 KNTFYNILIYNASNGYLITAKEGMFISNNLILKDGYIQLPSEKSFD---TIKYEKYTFSL 220 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + + K + + + + + + + I + RS Sbjct: 221 DVSYIKEISMQDFRTKDLLKLAVEEDSKVLSILADRFYFVIPFMFLGFIGFLSGINTYRS 280 Query: 302 NQPRIIVAYGIFSGFML--YTIITIMKSFGKSGILLPVAAALIPVILT 347 + + A + G+M+ Y + I++ + P+ +I ++ Sbjct: 281 KETLLTFAVSLSIGYMVLNYYFLKIIEKMPALFFVYPILLIVIFYLVY 328 >gi|285019432|ref|YP_003377143.1| permease [Xanthomonas albilineans GPE PC73] gi|283474650|emb|CBA17149.1| putative yjgp/yjgq family permease protein [Xanthomonas albilineans] Length = 361 Score = 47.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 23/215 (10%), Positives = 66/215 (30%), Gaps = 2/215 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP L RY + + ++ L+ +++ L ++ + + + Sbjct: 1 MPK-LDRYLLRDFFQSFSATLIVLLVVSVGGVLVDVLGNIAD-GRIPAKLLFSQLGLQFV 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + I+P ++ ++ L R SE+ + AIG+ +LL P ++ + + L Sbjct: 59 VYLPLILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRLLRPILMLVVPVVTLVGLCS 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + ++ L+ + + + + + + Sbjct: 119 LWLGPWADRTSDQLVNEANHSLLMAGLEAGRFTSLPDGSIVYVSTLSGDGTRLSKVFVQR 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQ 215 R ++L+ ++ Sbjct: 179 QKDGRLDVVTGQRGAMFFEGKAERYLRLEDGYRFE 213 >gi|166154183|ref|YP_001654301.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|166155058|ref|YP_001653313.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335428|ref|ZP_07223672.1| putative membrane transport protein [Chlamydia trachomatis L2tet1] gi|165930171|emb|CAP03655.1| putative membrane transport protein [Chlamydia trachomatis 434/Bu] gi|165931046|emb|CAP06609.1| putative membrane transport protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 354 Score = 47.0 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 116/358 (32%), Gaps = 13/358 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP ILW+ YLKTT++ L + + + L EI + + + + + + A ++P Sbjct: 1 MP-ILWKVLIFRYLKTTVFCTLSLICISIISSLQEIVSYIAK--DVPYATVFKVTAYQIP 57 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 ++ I+P + +F L+ +++ +A G S ++ P ++ S +L F Sbjct: 58 YLLPFILPASCFISAFTLFRKLSDNNQITFLKASGASQGMIIFPVLIASGVLCCFNFYTC 117 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 + +A+ I + + I K I Sbjct: 118 SELASICRFQTGKAIANIAMTSPALLLQTLQKKENDRIFIAIDHCGKSKFDNVIIALKHN 177 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + D + + V + + + N L + + Sbjct: 178 QEISNIGFIETIIPDVNKDSVQAKNVLVISKIPLFSEARTSNPNEFYLETLDEFLIPKIT 237 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + FA +S+ + K I + I I L+ MT ++ R Sbjct: 238 ATLFAGKSYMKTRTDY-LPWKQLIQDARLHLAEILRRIAIGLLCSTMTFSGLALGTYKPR 296 Query: 301 SNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI--LLPVAAALIPVILTISLSILILL 356 +P + + + I GK+ I + V L P +L+ + + Sbjct: 297 FRKP-------VLIYALFPILNLIFLIVGKNTIHPISAVMLFLFPQLLSWLIFSWRIY 347 >gi|32471812|ref|NP_864806.1| signal peptide [Rhodopirellula baltica SH 1] gi|32397183|emb|CAD72490.1| hypothetical protein-signal peptide and transmembrane prediction [Rhodopirellula baltica SH 1] Length = 413 Score = 46.6 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG- 329 T + IV + A+ L+ + R + +++ + + + TI + G Sbjct: 323 RTTTHERIVRAPLDFALILLVLP-MVVNRRGRKLFVLIGSAVGLIIAFFALKTIASALGG 381 Query: 330 KSGILLPVAAALIPVILTISLS 351 + ++ P AA IP+++ L+ Sbjct: 382 STTMVTPGIAAWIPLLIIGPLA 403 Score = 40.8 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 3/132 (2%) Query: 19 YFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI---IPFITLVVN 75 L + V + + S VLA P ++ ITL+ Sbjct: 1 MCFLSLAGIFIVFHAFTAMDDLIAQSKVGDSLPLVLAKFYGPYLLLLFDMTGTIITLMAF 60 Query: 76 IVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLI 135 + L RT EL + + G+S ++L P ++ S+ + + + Sbjct: 61 LFTAGWLRRTGELTATLSAGVSHGRILRPMIIASLAIISVQLANREWVIPRFRDSLTMKA 120 Query: 136 QQWKDNGDKQKS 147 + + ++ Sbjct: 121 KNLSGDIEQAVM 132 >gi|237756215|ref|ZP_04584779.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691625|gb|EEP60669.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 336 Score = 46.6 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 110/337 (32%), Gaps = 18/337 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL +Y K + K L + +++ L + + + S+ L Sbjct: 1 MKILDKYLIKLFFKNFLLLIGLFSLIITSSQLLHLPSFAYSMNIIDFSKLLFLIDI---S 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 I+ + F + ++V +L +E+ + GIS QLL P + +++ I + Sbjct: 58 FIKYQLLFAFFISWLLVGISLRDKNEIYAVYSAGISKKQLLKPVFIMTVIFVIIAFVFST 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 I S + + + + + +I++ +K N + + +S Sbjct: 118 VIVPSANRERYKFLTYKVKSYILENVSPKNFSKINDNVSVYVEKKEKNTFYNILIYNASS 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + + + + I+ + ++L + + S ++ ++ + Sbjct: 178 GYLITAKEGMFISN--NLILKDGYIQLPSGKSFDTIKYEKYTFSLDVSYIKEISMQDFKT 235 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 + + E K +S F IP M + + ++ S+ Sbjct: 236 KDLLRLAVEEDSKALSILADR-------------FYFAIPFMFLGFIGFLSGINTYRSKE 282 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 V+ I + Y + I++ + P+ Sbjct: 283 TLLTFAVSLSIGYMVLNYYFLKIIEKVPVLFFVYPIV 319 >gi|330975729|gb|EGH75795.1| permease YjgP/YjgQ [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 131 Score = 46.6 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%) Query: 266 HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM 325 R+ + + I +PL + +TL+A +S R + + + I I+ + Sbjct: 20 PAPRSVAELQWRISLPLSVFIVTLMAIPLSRVNPRQGRY-LKLLPAILLYMSYLAILISV 78 Query: 326 KSFGKSGILLPVAAALIPVILTISLSILILLQ 357 +S + G L + +S+ +L+ Sbjct: 79 RSSLEKGKLPLSLGMWWVHAIYLSIGLLLFYW 110 >gi|15612083|ref|NP_223735.1| hypothetical protein jhp1018 [Helicobacter pylori J99] gi|4155611|gb|AAD06602.1| putative [Helicobacter pylori J99] Length = 345 Score = 46.2 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV S+L+ + + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKAFVPLSLLVSAILLAFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKTENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A I +L Sbjct: 318 LFLMTFFFPFIWAFISYLLF 337 >gi|262363206|gb|ACY59927.1| membrane protein [Yersinia pestis D106004] Length = 225 Score = 46.2 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 69/204 (33%), Gaps = 1/204 (0%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ RY + LK+ + L +++ F L I + + L VP + Sbjct: 2 IIIRYLVRETLKSQIAILFILLLIFFSQKLVRILGAAVD-GEIPTNVVLSLLGLGVPEMA 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 Q I+P + ++ L SE+ + A G+ L+ ++ ++ + + Sbjct: 61 QLILPLSLFLGLLMTLGKLYTESEITVMNACGMGKKSLIMAALILALFTSGLAAINTIWL 120 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 K ++ K N + ++ +FIG N ++ Sbjct: 121 GPWSSKHQDVVLNDAKANPSLAALGGGQFKSSNDGNSALFIGNVAGKEFNRVFLAQLRPN 180 Query: 184 IDKKNKIIHRKDADLAIIYNDKVK 207 +++ ++ ++ + + Sbjct: 181 GNQRPSVVVADSGHMSELPDGSQM 204 >gi|15644990|ref|NP_207160.1| hypothetical protein HP0362 [Helicobacter pylori 26695] gi|2313464|gb|AAD07430.1| conserved hypothetical integral membrane protein [Helicobacter pylori 26695] Length = 345 Score = 45.8 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 90/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ F S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKVFAPLSLLVSAILLVFSLILIPTSKSTYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ K +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKTKNNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFASYLLF 337 >gi|327405435|ref|YP_004346273.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] gi|327320943|gb|AEA45435.1| permease YjgP/YjgQ family protein [Fluviicola taffensis DSM 16823] Length = 495 Score = 45.8 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 29/252 (11%), Positives = 75/252 (29%), Gaps = 2/252 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L + K + + +M+++ + + + ++ L Sbjct: 1 MKK-LTVFSIKSFGGPFVVTFFISMVMLIMQFTWVYIDDLMGK-GLGVAVIIELMFYVSA 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 +I +P L+ +I+ NL +EL ++ G+S++++L P I++ T Sbjct: 59 GLIPLALPLAILLSSIMTLGNLAENNELTALKSSGLSLFRILRPLTQTVIVIATATFFFA 118 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 N + +I ++ + + K + D+T Sbjct: 119 NYVIPVANLKWHTIIYDIQETKVGMLLTPGSYTKEIEGYAIKIKSGKDNTFKGITIHDYT 178 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + + K K L + ++ + + F+ Sbjct: 179 NPNVLKTVKADSGIVYKGDDGKYLLFHLSNGIIHEELQAQAPVFTEQGQSFHPGGDFRPS 238 Query: 241 SEQFASRSFYEI 252 + Y++ Sbjct: 239 RTTQFKAATYKM 250 Score = 45.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 28/84 (33%), Gaps = 3/84 (3%) Query: 266 HNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIM 325 + + +F+ + ++ + + A + R V + + + ++ Sbjct: 380 NYDLYQIEFHRKFALSGAIIVLFFVGAPLGA-IIRKGGFGAPVVIAALLFMVYFVLFSVG 438 Query: 326 KSFGKSG--ILLPVAAALIPVILT 347 ++ S IL P +P + Sbjct: 439 QNLATSNDKILSPFWGMWLPTAVL 462 >gi|297380268|gb|ADI35155.1| Hypothetical protein HPV225_1109 [Helicobacter pylori v225d] gi|308063875|gb|ADO05762.1| hypothetical protein HPSAT_05215 [Helicobacter pylori Sat464] Length = 345 Score = 45.8 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 92/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A I +L Sbjct: 318 LFLMTFFFPFIWAFISYLLF 337 >gi|218516795|ref|ZP_03513635.1| putative permease protein [Rhizobium etli 8C-3] Length = 102 Score = 45.8 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 11 MKLLETYILRRVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAI 94 II ++PF ++ +N SEL + A Sbjct: 70 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAA 102 >gi|188527872|ref|YP_001910559.1| hypothetical protein HPSH_05605 [Helicobacter pylori Shi470] gi|188144112|gb|ACD48529.1| hypothetical protein HPSH_05605 [Helicobacter pylori Shi470] Length = 345 Score = 45.5 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 92/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A + +L Sbjct: 318 LFLMTFFFPFIWAFVSYLLF 337 >gi|242310520|ref|ZP_04809675.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522918|gb|EEQ62784.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 341 Score = 45.5 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 36/317 (11%), Positives = 92/317 (29%), Gaps = 9/317 (2%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y F + + L + V+ I + + S L +PL++ +I Sbjct: 6 YLFHSFSQIFFPTFLVLFFIASVVIFIRIAG-VTFVVQISFLELLSLYFYTLPLMLFFVI 64 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P V + L+ EL + A+G+S +++ F ++L I ++ + Sbjct: 65 PLSFFVACALSLSRLSFDYELPVLFALGMSPNKIIKIFFPIALLASISLFILSLILTPLS 124 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + +++ K++ + ++ N + + + ++ + F Sbjct: 125 DLAYRQFLEERKNSININLQAGEFGQKLGNWLVYVKENHEDMSYKDIVLLSFGKEGGLIF 184 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 K + D + L Y+ I+K + + + Sbjct: 185 AKDAKIINKDGVME----AILDNGKIYRPDENAIEK----IAFKTLILRNSITDISGQNL 236 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 +E + + N + + L L+ + + Sbjct: 237 GVFEYWNRAFYENDRQRKTLRDLSMYVLMSLFPFVSLYFFPLLGVKNPRYQRNHTILQSM 296 Query: 308 VAYGIFSGFMLYTIITI 324 + G+F + Sbjct: 297 LIIGVFYALTYLVANYL 313 >gi|217034468|ref|ZP_03439880.1| hypothetical protein HP9810_890g13 [Helicobacter pylori 98-10] gi|216943070|gb|EEC22547.1| hypothetical protein HP9810_890g13 [Helicobacter pylori 98-10] gi|308062367|gb|ADO04255.1| hypothetical protein HPCU_05530 [Helicobacter pylori Cuz20] gi|317178605|dbj|BAJ56393.1| hypothetical protein HPF30_0296 [Helicobacter pylori F30] gi|332673892|gb|AEE70709.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 345 Score = 45.5 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 92/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A + +L Sbjct: 318 LFLMTFFFPFIWAFVSYLLF 337 >gi|224373192|ref|YP_002607564.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] gi|223589644|gb|ACM93380.1| putative permease YjgP/YjgQ [Nautilia profundicola AmH] Length = 323 Score = 45.5 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 36/315 (11%), Positives = 93/315 (29%), Gaps = 1/315 (0%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y + + L LV I + + + + + +P ++ Sbjct: 4 LSKYLISGFWPIFIMIFLILF-LVTSIIIIISIANITANIHITFGELFKMYMLSLPKVLF 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + + + +F + T EL+ + G+ + LL PF+ S+LL I +L++ Sbjct: 63 ITLSISFFISAVSLFAKHSETQELIALFSSGVKPYTLLKPFLFLSLLLTIVNLLILFISI 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + Q + + N K ++ + + I Sbjct: 123 PYAKVAFKNFKNQKQQAAKFNFQTSQISQRFGNWNIFTSSKKGKTYENIILYNNKENQLI 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K + K+ L + N + F ++ ++F Sbjct: 183 LAKYAELKNKNGYLNFELKKGNVYAFDKSTIINFGKMQINQKIPKSSYSIFRFSEYFKKF 242 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + + + + + +A+ +I ++ S Sbjct: 243 KELFAFYLPFALLPLSLIFFIPPISFFHPRIYKNRSLIYAIALIVIYLVLTKITSSLAVN 302 Query: 305 RIIVAYGIFSGFMLY 319 +I G++++ Sbjct: 303 SLICLLFFIVGYVVF 317 >gi|308183196|ref|YP_003927323.1| hypothetical protein HPPC_05300 [Helicobacter pylori PeCan4] gi|308065381|gb|ADO07273.1| hypothetical protein HPPC_05300 [Helicobacter pylori PeCan4] Length = 345 Score = 45.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 85/320 (26%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSKSTYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 ++ + + ++ + + + + + Sbjct: 144 AGEFGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELN--- 200 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 L Y + K ++ + + K+ + Sbjct: 201 LYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQ 260 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R +Q + + PL V + + + R G + I Sbjct: 261 KRRFSQAILVSLFPLASVFLIPL---FGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFGSYLLF 337 >gi|307637757|gb|ADN80207.1| integral membrane protein [Helicobacter pylori 908] Length = 345 Score = 45.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDATYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A I +L Sbjct: 318 LFLMTFFFPFIWAFISYLLF 337 >gi|145629199|ref|ZP_01784998.1| predicted permease [Haemophilus influenzae 22.1-21] gi|144978702|gb|EDJ88425.1| predicted permease [Haemophilus influenzae 22.1-21] Length = 270 Score = 45.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 87/256 (33%), Gaps = 10/256 (3%) Query: 101 LLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQ 160 ++ ++ S+L ++ + +++++ K N ++ +N Sbjct: 1 MVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNV 60 Query: 161 DIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKV--KLKKVVEYQYGR 218 +FI K +++ + K +I + +L + N LK + Sbjct: 61 VLFIDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTS 120 Query: 219 IPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 D T + G+Q + + + + + S + + ++ I Sbjct: 121 ALPDFRITHFDEYHAYLGYQSAENTNDEVAELTLSQLIDLDSSSA-------KAELHWRI 173 Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 + L + M LIA +S R + + + + + + + KS G +G L Sbjct: 174 TLILAVPLMALIAVPLSRVNPRQGRFAK-ILPALLLYLIYFLLQSSFKSAGSAGKLEAEL 232 Query: 339 AALIPVILTISLSILI 354 + I L++++ Sbjct: 233 LMPLVNIGFFLLAVVL 248 >gi|317177843|dbj|BAJ55632.1| hypothetical protein HPF16_1035 [Helicobacter pylori F16] Length = 345 Score = 45.1 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 93/320 (29%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSSKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y + +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWEKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A I +L Sbjct: 318 LFLMTFFFPFIWAFISYLLF 337 >gi|307721207|ref|YP_003892347.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] gi|306979300|gb|ADN09335.1| permease YjgP/YjgQ family protein [Sulfurimonas autotrophica DSM 16294] Length = 340 Score = 45.1 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 34/338 (10%), Positives = 102/338 (30%), Gaps = 16/338 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y + + L ++ VI L + + SI L +P I+ Sbjct: 4 LQKYILNNFSALFMSIFLPLFVIASVIFLI-KLSTYTAVIQLSIWEMGKLYLFVLPEILF 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + + F L+ +E+++ A+GI ++ F + +L + ++ Sbjct: 63 YTLPITFFIAATLSLFKLSNDNEIIVIFALGIEPGFIVKTFFKPAFILSLLLAFDFLVVS 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + + K + + I K + Sbjct: 123 PHTTVLSKNFLSYKKSEAKFNLAASEFGNSFGDWLLYIGEKDKDGTFSKVFLFNKKQ--- 179 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 ++ ++ I + + + + S + N +++ Sbjct: 180 ---------ENEEILIAAKRATVINDAGILRLKLMDGEGYSYSTNKFSQVNFKAMLINDT 230 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + + + + + R + ++ L + + AS+ + R + Sbjct: 231 LKADLTTYKQPLQY--WLSKENAGRKKHVLIKDTLLSLFPMITLFLIASIGIVQVRHQKS 288 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 ++ + + + Y + ++ + +L V + + Sbjct: 289 KVYLYL-FLTIVLYYGMTIGLEKMFQYYTILVVTLSWL 325 >gi|325996358|gb|ADZ51763.1| integral membrane protein [Helicobacter pylori 2018] gi|325997946|gb|ADZ50154.1| hypothetical protein hp2017_1044 [Helicobacter pylori 2017] Length = 345 Score = 45.1 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 85/320 (26%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 ++ + + ++ + + + + + Sbjct: 144 AGEFGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELN--- 200 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 L Y + K ++ + + K+ + Sbjct: 201 LYNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQ 260 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R +Q + + PL V + + + R G + I Sbjct: 261 KRRFSQAILVSLFPLASVFLIPL---FGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A I +L Sbjct: 318 LFLMTFFFPFIWAFISYLLF 337 >gi|317014475|gb|ADU81911.1| hypothetical protein HPGAM_05615 [Helicobacter pylori Gambia94/24] Length = 345 Score = 45.1 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 90/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKTENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YNGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFASYLLF 337 >gi|254779645|ref|YP_003057751.1| hypothetical protein HELPY_1062 [Helicobacter pylori B38] gi|254001557|emb|CAX29575.1| Conserved hypothetical protein; putative membrane protein; putative signal peptide [Helicobacter pylori B38] Length = 345 Score = 45.1 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 K + G + L++ K+ F + + Y K +F +N Sbjct: 202 YKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFASYLLF 337 >gi|261838424|gb|ACX98190.1| integral membrane protein [Helicobacter pylori 51] Length = 345 Score = 44.7 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 92/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 K + G + L++ K+ F + + Y K +F +N Sbjct: 202 YKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A + +L Sbjct: 318 LFLMTFFFPFIWAFVSYLLF 337 >gi|153875332|ref|ZP_02003181.1| permease YjgP/YjgQ [Beggiatoa sp. PS] gi|152068203|gb|EDN66818.1| permease YjgP/YjgQ [Beggiatoa sp. PS] Length = 218 Score = 44.7 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + + +PL ++ + +A +S R Q + +GI + ++ + K + + G + Sbjct: 105 QWRLSLPLTVILLAALAVPLSHTTPRQGQYAK-ILFGILIYLIYNNLLNVAKKWVERGDV 163 Query: 335 LPVAAALIPV 344 P Sbjct: 164 PPWIGVWWVH 173 >gi|317011287|gb|ADU85034.1| hypothetical protein HPSA_05295 [Helicobacter pylori SouthAfrica7] Length = 345 Score = 44.7 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV SIL+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMAKAFVPLSILVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNKNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKIDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGIYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFASYLLF 337 >gi|317009699|gb|ADU80279.1| hypothetical protein HPIN_05385 [Helicobacter pylori India7] Length = 345 Score = 44.7 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 89/320 (27%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R ++ L +A + + R G + I Sbjct: 262 RRFSQAV----LVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFASYLLF 337 >gi|317180825|dbj|BAJ58611.1| hypothetical protein HPF32_1029 [Helicobacter pylori F32] Length = 345 Score = 44.7 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A I +L Sbjct: 318 LFLMTFFFPFIWAFISYLLF 337 >gi|308184829|ref|YP_003928962.1| hypothetical protein HPSJM_05385 [Helicobacter pylori SJM180] gi|308060749|gb|ADO02645.1| hypothetical protein HPSJM_05385 [Helicobacter pylori SJM180] Length = 345 Score = 44.7 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 92/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 K + G + L++ K+ F + + Y K +F +N Sbjct: 202 YKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGIYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A I +L Sbjct: 318 LFLMTFFFPFIWAFISYLLF 337 >gi|208434987|ref|YP_002266653.1| hypothetical protein HPG27_1034 [Helicobacter pylori G27] gi|298735907|ref|YP_003728432.1| hypothetical protein HPB8_411 [Helicobacter pylori B8] gi|208432916|gb|ACI27787.1| hypothetical protein HPG27_1034 [Helicobacter pylori G27] gi|298355096|emb|CBI65968.1| conserved hypothetical protein [Helicobacter pylori B8] gi|317012864|gb|ADU83472.1| hypothetical protein HPLT_05405 [Helicobacter pylori Lithuania75] Length = 345 Score = 44.7 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 K + G + L++ K+ F + + Y K +F +N Sbjct: 202 YKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFGSYLLF 337 >gi|326561252|gb|EGE11611.1| putative ABC transporter permease protein YjgP/YjgQ [Moraxella catarrhalis 46P47B1] Length = 120 Score = 44.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 IL +Y + L ++G ++ V + + E Y+++ + R P + Sbjct: 5 ILPKYVIRSALLAMAGAVVGLWLVQMVFAYLAELDNISET--YTLTDALLFILYRSPYFL 62 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 Q IP TL+ ++ L SEL++ RA G+SI+++++ ++ +++ ++ V + Sbjct: 63 VQFIPTGTLLGAVIGLGLLANHSELIVMRAAGMSIYRIVSWAMLPAVIFVAISLGVNH 120 >gi|34763638|ref|ZP_00144567.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886691|gb|EAA23835.1| Hypothetical Membrane Spanning Protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 176 Score = 44.3 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 1/163 (0%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M + Y KY++K L ++G M + + +I + + +P Sbjct: 1 MIKKMDIYISKYFIKFFLMNIIGFMGVFLLAQTFKIIKYI-NQGKLAGGEIFDYIINLLP 59 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + + P L+ ++ + E+V + GI +++ ++ + ++ + + Sbjct: 60 KMFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFVISLIVFFIN 119 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF 163 N I T + D K + I+N ++ Sbjct: 120 NSIYTKSLAKINFYRRGEVDESLKLPTTKENAFFINNTDGYLY 162 >gi|225848004|ref|YP_002728167.1| permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] gi|225644087|gb|ACN99137.1| putative permease, YjgP/YjgQ family [Sulfurihydrogenibium azorense Az-Fu1] Length = 339 Score = 44.3 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 107/349 (30%), Gaps = 19/349 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 IL RY K + K + + I++ L + N + + V+ Sbjct: 1 MKILHRYILKNFFKKFIILIGLFSIVITSSQLLHLPNFAYSMNLIDFLQLLVMIDI---S 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ I F + ++V ++ +E+ ++G+S +LL P + + L ++V Sbjct: 58 FLKYQILFGFFIAWLLVGVSIRENNEIYAVYSLGVSQKELLKPVFITTTLFTALALIVSI 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + + N + + KI ++ + Sbjct: 118 TLIPYANQERSKFLTLKVKNYILESIQPKNF--------------SKINENISVYTESKE 163 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + K I ++ + L KVV + S ++ K S Sbjct: 164 NSTLHKIIIYNKSNKYLITAKEGIFFQDKVVLKDGYIHIPSEKSFSVIKYEKYSFSLDTS 223 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 ++ S +A + I P+ + + I + L FS+S Sbjct: 224 YVKEIPLEDYKTSQLINVFFSKEKDYQKAYSVLIDRIFFPIPFIFIGFIGFLLGLNFSKS 283 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 + + + I + I + + + L+ ++L + Sbjct: 284 KETLLSLVISI--SILYMVINYLFIRVIEKNTFISFVYLLVLILLFSGI 330 >gi|328676744|gb|AEB27614.1| Permease YjgP/YjgQ family protein [Francisella cf. novicida Fx1] Length = 276 Score = 44.3 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 21/265 (7%), Positives = 72/265 (27%), Gaps = 3/265 (1%) Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 + ++ A GI+ Q++ + + L I T++ + + ++ Sbjct: 1 MFVTLAGGITWMQIVKNTLKPVVALTIITLITVMYLNPLSKQTLDIYKASLSAKALLSSI 60 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 ++ + + + T + K Sbjct: 61 TDQKIIKAPDGKIIYIGNKSGNTLSDVFLYQNTPQDGEYKVMTAPTAKIVSDKTAAYIDF 120 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + + + + + S F + + N ++ + Sbjct: 121 MNVNIYTKNSQN--SEYSYDNAKKAIYTIFDNSDRDYNHDRVDRLYMHTLIENFNDKTNG 178 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 + +F+ I + ++ +L+A ++ R N+ + + + + + Sbjct: 179 TAYKAEFFGRINNAISVIVSSLLALALCRLRPRQNKYAK-LLPSVVVLAIYLCTNMFINT 237 Query: 328 FGKSGILLPVAAALIPVILTISLSI 352 +G + +P I ++ Sbjct: 238 LMANGSVPVWIGFWLPHIFFTIFAV 262 >gi|261839824|gb|ACX99589.1| hypothetical protein HPKB_1021 [Helicobacter pylori 52] gi|315586981|gb|ADU41362.1| conserved hypothetical protein [Helicobacter pylori 35A] gi|317182344|dbj|BAJ60128.1| hypothetical protein HPF57_1054 [Helicobacter pylori F57] Length = 345 Score = 44.3 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A + +L Sbjct: 318 LFLMTFFFPFIWAFVSYLLF 337 >gi|289612556|emb|CBI60086.1| unnamed protein product [Sordaria macrospora] Length = 139 Score = 44.3 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIP 343 + + ++A ++ + RS+ + V I + + ++ G G + P+ A +P Sbjct: 1 MFLLPMLALALGVPPKRSSS-ALGVFLSIVMIVTYHKVNEYGEAVGGLGRIDPILALWVP 59 Query: 344 VILTISLSILI 354 +L +L + Sbjct: 60 FLLFAALVFRL 70 >gi|108563456|ref|YP_627772.1| hypothetical protein HPAG1_1031 [Helicobacter pylori HPAG1] gi|107837229|gb|ABF85098.1| conserved hypothetical integral membrane protein [Helicobacter pylori HPAG1] Length = 345 Score = 44.3 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 90/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 + G + L++ K+ F + + Y K +F +N Sbjct: 202 YSGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASVFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFGSYLLF 337 >gi|210135251|ref|YP_002301690.1| integral membrane protein [Helicobacter pylori P12] gi|210133219|gb|ACJ08210.1| integral membrane protein [Helicobacter pylori P12] Length = 345 Score = 43.9 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 6/320 (1%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S + FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKTMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 K + G + L++ K+ F + + Y K +F +N Sbjct: 202 YKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDTAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 R I++ L +A + + R G + I Sbjct: 262 RRFSQA----ILVSLFPLASMFLIPLFGIANPRFKTNWSYFYVLGAVGVYFLMVHVISTD 317 Query: 328 FGKSGILLPVAAALIPVILT 347 P A +L Sbjct: 318 LFLMTFFFPFIWAFASYLLF 337 >gi|218661972|ref|ZP_03517902.1| putative permease protein [Rhizobium etli IE4771] Length = 115 Score = 43.9 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 +L Y + + L LL + +++ + + N + + SI A LA +P Sbjct: 11 MKLLETYILRGVGQMFLVALLPVLAIIWTTQVLQRINLVTD-SGQSIGSFAKLATMILPS 69 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIG 95 II ++PF ++ +N SEL + A G Sbjct: 70 IIPVVLPFALVIAITQTLTTMNNDSELTVIDAAG 103 >gi|304383499|ref|ZP_07365959.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335309|gb|EFM01579.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 634 Score = 43.9 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 27/104 (25%), Gaps = 1/104 (0%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + + + + L + I A + R + V + Sbjct: 354 DFRAMLTSDGDQLIREHDIEAISKFTLALSCLIFFFIGAPLGA-IIRKGGLGVPVIISVL 412 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + Y + + G+ + + I LSI I + Sbjct: 413 VYIIYYILDNSGYRMARGGMWTVWFGKGLAPAVLIPLSIFITYK 456 >gi|262363205|gb|ACY59926.1| membrane protein [Yersinia pestis D106004] Length = 116 Score = 43.5 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Query: 259 SNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFML 318 + A +F++ + + + +V M L+ +S+ R + + + + + Sbjct: 3 MKELWRSQEPDARAEFHWRLTLIVSVVIMALLVVPLSVVNPRQGRV-LSMLPAMLLYLIF 61 Query: 319 YTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 + + + ++S +G L P+ ++L+I++ Sbjct: 62 FLLQSSLRSKAGNGQLDPLVWMWAVNGAYLALAIIL 97 >gi|283955209|ref|ZP_06372710.1| LOW QUALITY PROTEIN: putative integral membrane protein [Campylobacter jejuni subsp. jejuni 414] gi|283793246|gb|EFC32014.1| LOW QUALITY PROTEIN: putative integral membrane protein [Campylobacter jejuni subsp. jejuni 414] Length = 353 Score = 43.5 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 35/327 (10%), Positives = 93/327 (28%), Gaps = 5/327 (1%) Query: 31 IDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVI 90 IDL + + N ++ L + VP ++ + F +V I ++ R +E V Sbjct: 30 IDLLLNFKDLPKAANLNLLYIMFLCFSAVPYVLPISLIFALVVSLI----SMIRANEFVS 85 Query: 91 SRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDII 150 A+G+S ++ + ++ + + ++++ + + Sbjct: 86 LYALGLSKNYVVLFPFLWALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMTQSGEVFLK 145 Query: 151 PWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKK 210 + + D + ++ + N + K Sbjct: 146 FNNNFVYISKINNGQNSAQNIKIFNINDSNLSSFISAKNAYFEGESWILRDGNITLLPKN 205 Query: 211 VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRA 270 G D + K + + + F ++ R Sbjct: 206 YELANDGLKIKDFSQLKSLDGFKPKIIEGVASNSDYSISDALESFELFRAQNVNTDALRI 265 Query: 271 ETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGK 330 + L M LI +R + M++ ++ ++ + Sbjct: 266 NLYKFIFTPFFLPHFLM-LIMYYFFPIIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSE 324 Query: 331 SGILLPVAAALIPVILTISLSILILLQ 357 + ++ +IP+I+ LS + + Sbjct: 325 NSVIASEIGIVIPIIILGCLSAYMYYK 351 >gi|224533436|ref|ZP_03674029.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi CA-11.2a] gi|224513398|gb|EEF83756.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi CA-11.2a] Length = 390 Score = 43.1 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 52/152 (34%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 +K +E + + + + + + + + + ++S + Sbjct: 236 NIKNNLEGDFLSLNFSNLYLNYLYNQNYYMDESYVFENLNYMYNLNLNFKPYQDRSMKQN 295 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 +FY I +PL ++ +A S+ + +R + + I + + K Sbjct: 296 LALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIVCVFYWVMFIGGK 355 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + P+ ++P ++ I ++ L+ Sbjct: 356 VYTVQYAPSPIIVTILPNLILIIAGAILFLRL 387 >gi|219685677|ref|ZP_03540491.1| conserved hypothetical integral membrane protein [Borrelia garinii Far04] gi|219672793|gb|EED29818.1| conserved hypothetical integral membrane protein [Borrelia garinii Far04] Length = 390 Score = 42.8 bits (98), Expect = 0.085, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + +KS + +FY I +PL ++ +A S+ + +R + + I Sbjct: 283 NFKPYQDKSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISII 342 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P ++ I ++ L+ Sbjct: 343 ICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRL 387 >gi|152990851|ref|YP_001356573.1| hypothetical protein NIS_1107 [Nitratiruptor sp. SB155-2] gi|151422712|dbj|BAF70216.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 338 Score = 42.4 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 37/338 (10%), Positives = 96/338 (28%), Gaps = 13/338 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 MP +L RY + ++ L + L + +I + + S+ A L P Sbjct: 1 MPKLL-RYLGNHLYESFLSYFLPLFGIASLIFFI-KIVSLTSIVQLSLVDLAKLYIFITP 58 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I+ IP + + + L+ E + ++GIS +++ + ++LL + ++ Sbjct: 59 QILFFTIPVVFFIAAVTALHKLSFDYETIAFFSLGISPTKIMRYLTLLAVLLSLLLFIIA 118 Query: 121 NPIATS------GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENH 174 + G + W + + +L Sbjct: 119 YMLIPQGKQLEKGFYRYKKTEANINLKPSEYGHKFGNWFVYVQKKDKNNLFENVVLYNFD 178 Query: 175 IWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKM 234 ++ + N K +++ +++T + Sbjct: 179 NEQERFITSKKATFDNSQYGLKLTLYDGNAYTYKKGILDQITFTKMDLFDTSTSYYFQYI 238 Query: 235 DGFQK-----FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL 289 D ++Q A + + + Y + L ++ Sbjct: 239 DPIHYWEKAFLNKQRAFDMLFFLWIALLPVLGMPYAGMIGIHHPRYHKGGVFLKVLFALF 298 Query: 290 IAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 I + S++ ++ ++ +Y + S Sbjct: 299 IYFGFAFLLSKTLYYYSLLFMALWFFGGIYLFHKTIMS 336 >gi|224534174|ref|ZP_03674754.1| conserved hypothetical integral membrane protein [Borrelia spielmanii A14S] gi|224514599|gb|EEF84913.1| conserved hypothetical integral membrane protein [Borrelia spielmanii A14S] Length = 429 Score = 42.4 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + ++S + +FY I +PL ++ +A S+ L +R + + I Sbjct: 322 NFKPYQDRSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGLYSNRKYSIILELVISII 381 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P ++ I ++ L+ Sbjct: 382 ICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRI 426 >gi|297170536|gb|ADI21564.1| hypothetical protein [uncultured verrucomicrobium HF0070_35E03] Length = 324 Score = 42.4 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 34/324 (10%), Positives = 88/324 (27%), Gaps = 34/324 (10%) Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +PF +V + + E++ R++G + LL ++ L+ + + + Sbjct: 1 MALPFGFVVSVVFLIGKWVADGEILAYRSLGGDVLALLWVVMLFGTLISVISTYSSLEWS 60 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIF--------------------- 163 L + + + + + Sbjct: 61 PVNRSKFDQLKNEILWTQTNLLLEERGEIGFAFHSDEQSKTSEKLNALAGERIRGASLSV 120 Query: 164 -------IGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY 216 +I+ E+ + +K + RKD ++ V L+ Sbjct: 121 FDASDDLWKNLRIVLSGGPNEEVLVVIHARKAFVEKRKDKGELVLDLLDVDLEYGFSTGE 180 Query: 217 GRIPIDKNSTTLNIPIKMDGFQK--FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 S + + + F E++ + S + + Sbjct: 181 KAAGGQFLSFERWKEPIVFQINQEARPKGVKRMGFTELLSAIERSEDPQFRNEGISLLSK 240 Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGIL 334 + + L+ + S S I ++ G+ G Y + ++ L Sbjct: 241 NLSFGTSPFFLGILLVPIGILAGKSES---LINLSLGLAIGLGFYAMGLLLSGLMGKHDL 297 Query: 335 LPVAAALIPVILTISLSILILLQK 358 A P I+ L ++++++ Sbjct: 298 G-FAGWWAPNIVCFLLGMILMIRI 320 >gi|145487896|ref|XP_001429953.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124397047|emb|CAK62555.1| unnamed protein product [Paramecium tetraurelia] Length = 1677 Score = 42.4 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 42/369 (11%), Positives = 99/369 (26%), Gaps = 24/369 (6%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 YF +L + F L +L + + L +I L + Sbjct: 1240 YFIMVFLLSLAGFSFITGGLNIFFNLLDSIQMLAYLKYLNIIFPYNLQMYFETFGFAEFD 1299 Query: 68 PFITLVVNIVVFFNL-NRTSELVISRAIGI----SIWQLLNPFVVGSILLGIFTVLVINP 122 + + + + SE + S++ + V+ ++ T ++ Sbjct: 1300 FLKEYISVQLTILDFDFKMSENQPDQKFAEEGYSSLFVINILSVLSVFVITYCTFMLSII 1359 Query: 123 IATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 + L + D+ ++ I G N+I ++ Sbjct: 1360 LNKLCNYYIHYLHNKISDDIYFVLGMFQYYLYIGAKHLLFLSGIYTSQIHNNIIRTILTV 1419 Query: 183 TIDKKNKI-----IHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGF 237 +D + +++ D + + + +++ YG I K Sbjct: 1420 AMDFNMAMFLQLKMYQNDMGFSYYLSVIAFIAQLLFIYYGLNAISKKQYEFVTQTYKQKH 1479 Query: 238 QKFSEQFASR---SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASV 294 + F E F + M K + ++ + + I + Sbjct: 1480 ESFLEGNPEIHQNQFVKYYNLMILIKKMMFMFSLIFLYHCPSFQILISSIQNIIFIGYII 1539 Query: 295 SLEFSRSNQPRIIVAYG-------IFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 + + V ++Y I + +S I + Sbjct: 1540 LTKPLKDINEFYKVILTECILWLEQLFILLIYYIQSGTNQLDQSQISNMEILGW----VI 1595 Query: 348 ISLSILILL 356 I LS+++LL Sbjct: 1596 IGLSVVMLL 1604 >gi|224532217|ref|ZP_03672849.1| conserved hypothetical integral membrane protein [Borrelia valaisiana VS116] gi|224511682|gb|EEF82088.1| conserved hypothetical integral membrane protein [Borrelia valaisiana VS116] Length = 390 Score = 42.4 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 53/152 (34%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 +K +E + + + + + + + + + +KS I + Sbjct: 236 NIKNNLEGDFLSLNFSNLYLNYLYNQNYYVDESYVFENLNYMYNLNLNFKPYQDKSMIQN 295 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 +FY I +PL ++ +A S+ + +R + + I + + K Sbjct: 296 LALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIVCVFYWVMFIGGK 355 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + P+ ++P ++ I ++ L+ Sbjct: 356 VYTVQYAPNPIVVTILPNLILIVAGAILFLRL 387 >gi|203284703|ref|YP_002222443.1| hypothetical protein BDU_815 [Borrelia duttonii Ly] gi|201084146|gb|ACH93737.1| conserved hypothetical integral membrane protein [Borrelia duttonii Ly] Length = 429 Score = 42.4 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 37/105 (35%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + + +FY I +PL ++ +A + + ++ + + I Sbjct: 322 NYAPYEDLIANRSYAFFYLEFYQKISLPLSVLFFIFLAFGMGMYSNKKYSIILELVISIL 381 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P IL + +++ L+ Sbjct: 382 ICVFYWAMFMGGKVYTVQHAPNPILVIILPNILLMVAGLILFLRL 426 Score = 38.1 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 28/242 (11%), Positives = 73/242 (30%), Gaps = 3/242 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + K L + + F+ + + + + + +P+++ Sbjct: 11 YIITEFCKYFFITFLFFLFVFFINQILFFMRILLQNY-VPFFKAFIFVIYSLPMVVALSP 69 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PF L+ I+ + +E++ R+IGISI LL PF+ +++ + + ++ + + G Sbjct: 70 PFAALLSVILTIYRFKLNNEILAFRSIGISISNLLTPFLKLGVIIALVSFILNDFLLPLG 129 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + + K+ + G K ++ + Sbjct: 130 SIGRLKIFNDIKEEIPHLILKP--YSSKQYGDLIFVSGEKSETGYKNVTFFDNTRLKGYD 187 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + ++ + L V+ +K Q Sbjct: 188 RIFMAKELNIQKENHQVYFILNNVLSIALTEDEKGFYDYFYADRMKYSIDQVTFSDGWVL 247 Query: 248 SF 249 ++ Sbjct: 248 TY 249 >gi|323163036|gb|EFZ48869.1| hypothetical protein ECE128010_0632 [Escherichia coli E128010] Length = 150 Score = 42.4 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 48/151 (31%), Gaps = 1/151 (0%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 ++ Y + + L + + + + ++ + +V + Sbjct: 1 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSSQRYLTEAAN-GTLALDVVLDIVFYKVLI 59 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ ++P V V + SE+ A G S +L + +I L IF L+ Sbjct: 60 ALEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSM 119 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 L QQ + D ++ + Sbjct: 120 YGRPWAYAQIYQLEQQSQSELDVRQLRAKKF 150 >gi|15595152|ref|NP_212941.1| hypothetical protein BB0807 [Borrelia burgdorferi B31] gi|221217627|ref|ZP_03589096.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 72a] gi|225551663|ref|ZP_03772607.1| conserved hypothetical integral membrane protein [Borrelia sp. SV1] gi|226320854|ref|ZP_03796406.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 29805] gi|2688742|gb|AAC67148.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi B31] gi|221192573|gb|EEE18791.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 72a] gi|225371690|gb|EEH01116.1| conserved hypothetical integral membrane protein [Borrelia sp. SV1] gi|226233720|gb|EEH32449.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 29805] Length = 429 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 52/152 (34%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 +K +E + + + + + + + + + ++S + Sbjct: 275 NIKNNLEGDFLSLNFSNLYLNYLYNQNYYVDESYVFENLNYMYNLNLNFKPYQDRSMKQN 334 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 +FY I +PL ++ +A S+ + +R + + I + + K Sbjct: 335 LALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIVCVFYWVMFIGGK 394 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + P+ ++P ++ I ++ L+ Sbjct: 395 VYTVQYAPSPIIVTILPNLILIIAGAILFLRL 426 >gi|256419088|ref|YP_003119741.1| protoporphyrinogen oxidase-like protein [Chitinophaga pinensis DSM 2588] gi|256033996|gb|ACU57540.1| Protoporphyrinogen oxidase-like protein [Chitinophaga pinensis DSM 2588] Length = 1033 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 25/356 (7%), Positives = 81/356 (22%), Gaps = 13/356 (3%) Query: 13 YLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITL 72 ++ + + L + + I ++ P + Sbjct: 672 FIANYVSSDALFLSLSLIWFTLLLWILHRPNKGLIIWHAVIILLAFTVRYNALFYPIVAA 731 Query: 73 VVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGI 132 + ++ ++S + I+ + + + Sbjct: 732 IAFLISRQPWRMKVVGMLSSMVLIAGFVWHTSNQYDRLTGIRQFSPFSGWQMANNALYAY 791 Query: 133 DLIQQW----------KDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSI 182 +Q + + + + Q+ + + + + Sbjct: 792 RFVQDEPPPPMPAKFKQLDKMVRTYFDTTRNIFMHQQEMMIANTWYMWDPKSPLQQYMYQ 851 Query: 183 TIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 K + K + + +Y T+ F Sbjct: 852 KFKKDSTAHILKKWASVGPLFSEYGAYLIKQYPVTFTQYYLVPNTMKYYAPPVEFLDTYN 911 Query: 243 QFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSN 302 + F ++ H + I + ++ + I + + Sbjct: 912 MGKDSIAPIGQQWFGFESRKLKTHFKDLKVTILNFYPILVGMMNVVFIFSLFGFVLLKGF 971 Query: 303 QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + ++ G+ F L+ I F L +P+++ S +L++ Sbjct: 972 KYNKSLSVGLLLAFGLWIINFGFSVFASQIALRFQM---LPILIFFSFGLLLIDYI 1024 >gi|315636695|ref|ZP_07891925.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315479010|gb|EFU69713.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 338 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 35/338 (10%), Positives = 99/338 (29%), Gaps = 17/338 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + T G + VI L + + + + + + +P II Sbjct: 3 LQRYLYSQLAITFFPIFFGLFFITAVIFLV-KISALTAIITVNFFELFRIFSYTIPDIIF 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + ++ L+ EL + + G++ +++L F+ ++LL + ++V + Sbjct: 62 YTMPISFFISMVITLSKLSSEYELTVITSFGLNPFKILKIFLPLTLLLTLLLLVVSVGLI 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + K+ + + + I +N+++ED + + Sbjct: 122 PKTDFERKQFVNIKKNEANFNIKSGEFGQKFGDWLIFIN------DKKNNLYEDVKLLKV 175 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 N + + ++ + + N D Sbjct: 176 QNDNDQFVISKNAVLDNDKGVLSIRLAEGKAFLIEKEEFNQINYEAMYINDSISSAKTTV 235 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + ++ + + + + + + + R + Sbjct: 236 FTTTYDYWKDNIKNKVDLDDLTFFI---------LTSFFPLMSLFLVITFGYFNPRYEKN 286 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + Y + S + Y +I + L + + Sbjct: 287 -RAIMYSLISIVLYYVLIKSIGDKIFLHTLYIIPILWL 323 >gi|216264700|ref|ZP_03436692.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 156a] gi|223889298|ref|ZP_03623885.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 64b] gi|224533066|ref|ZP_03673671.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi WI91-23] gi|225549397|ref|ZP_03770369.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 94a] gi|225550295|ref|ZP_03771254.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 118a] gi|215981173|gb|EEC21980.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 156a] gi|223885219|gb|EEF56322.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 64b] gi|224512002|gb|EEF82398.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi WI91-23] gi|225369163|gb|EEG98617.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 118a] gi|225370025|gb|EEG99466.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi 94a] gi|312147984|gb|ADQ30643.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi JD1] gi|312149484|gb|ADQ29555.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi N40] Length = 429 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 52/152 (34%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 +K +E + + + + + + + + + ++S + Sbjct: 275 NIKNNLEGDFLSLNFSNLYLNYLYNQNYYMDESYVFENLNYMYNLNLNFKPYQDRSMKQN 334 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 +FY I +PL ++ +A S+ + +R + + I + + K Sbjct: 335 LALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIVCVFYWVMFIGGK 394 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + P+ ++P ++ I ++ L+ Sbjct: 395 VYTVQYAPSPIIVTILPNLILIIAGAILFLRL 426 >gi|203288235|ref|YP_002223250.1| hypothetical protein BRE_818 [Borrelia recurrentis A1] gi|201085455|gb|ACH95029.1| conserved hypothetical integral membrane protein [Borrelia recurrentis A1] Length = 429 Score = 42.0 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 37/105 (35%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + + +FY I +PL ++ +A + + ++ + + I Sbjct: 322 NYAPYEDLIANRSYAFFYLEFYQKISLPLSVLFFIFLAFGMGMYSNKKYSIILELVISIL 381 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P IL + +++ L+ Sbjct: 382 ICVFYWAMFMGGKVYTVQHAPNPILVIILPNILLMVAGLILFLRL 426 Score = 38.1 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 74/242 (30%), Gaps = 3/242 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + K L + + F+ + + + S + + +P+++ Sbjct: 11 YIITEFCKYFFITFLFFLFVFFINQILFFMRILLQNY-VSFFKAFIFVIYSLPMVVALSP 69 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PF L+ I+ + +E++ R+IGISI LL PF+ +++ + + ++ + + G Sbjct: 70 PFAALLSVILTIYRFKLNNEILAFRSIGISISNLLTPFLKLGVIIALVSFILNDFLLPLG 129 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + + K+ + G K ++ + Sbjct: 130 SIGRLKIFNDIKEEIPHLILKP--YSSKQYGDLIFVSGEKSETGYKNVTFFDNTRLKGYD 187 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + ++ + L V+ +K Q Sbjct: 188 RIFMAKELNIQKENHQVYFILNNVLSIALTEDEKGFYDYFYADRMKYSIDQVTFSDGWVL 247 Query: 248 SF 249 ++ Sbjct: 248 TY 249 >gi|303235938|ref|ZP_07322541.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] gi|302483811|gb|EFL46803.1| permease, YjgP/YjgQ family [Prevotella disiens FB035-09AN] Length = 650 Score = 42.0 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 9/94 (9%), Positives = 25/94 (26%), Gaps = 1/94 (1%) Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 + + + + L + I A + R + + + + Y + Sbjct: 378 DKMIRQHDIEEINKYTLALTCLIFFFIGAPLGA-IIRKGGLGVPIIVSVLVFIIYYILDF 436 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 K G + + I +I + + Sbjct: 437 TGGRMAKQGYWAIWFGRGLSPAVLIPTAIFVTYK 470 >gi|218249949|ref|YP_002375305.1| hypothetical protein BbuZS7_0837 [Borrelia burgdorferi ZS7] gi|226321272|ref|ZP_03796800.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi Bol26] gi|218165137|gb|ACK75198.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi ZS7] gi|226233304|gb|EEH32055.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi Bol26] Length = 429 Score = 42.0 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 52/152 (34%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 +K +E + + + + + + + + + ++S + Sbjct: 275 NIKNNLEGDFLSLNFSNLYLNYLYNQNYYVDESYVFENLNYMYNLNLNFKPYQDRSMKQN 334 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 +FY I +PL ++ +A S+ + +R + + I + + K Sbjct: 335 LALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIVCVFYWVMFIGGK 394 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + P+ ++P ++ I ++ L+ Sbjct: 395 VYTVQYAPSPIIVTILPNLILIIAGAILFLRL 426 >gi|195941983|ref|ZP_03087365.1| hypothetical protein Bbur8_03799 [Borrelia burgdorferi 80a] Length = 429 Score = 42.0 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 52/152 (34%) Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFH 266 +K +E + + + + + + + + + ++S + Sbjct: 275 NIKNNLEGDFLSLNFSNLYLNYLYNQNYYMDESYVFENLNYMYNLNLNFKPYQDRSMKQN 334 Query: 267 NYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMK 326 +FY I +PL ++ +A S+ + +R + + I + + K Sbjct: 335 LALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIVCVFYWVMFIGGK 394 Query: 327 SFGKSGILLPVAAALIPVILTISLSILILLQK 358 + P+ ++P ++ I ++ L+ Sbjct: 395 VYTVQYAPNPIIVTILPNLILIIAGAILFLRL 426 >gi|207092118|ref|ZP_03239905.1| hypothetical protein HpylHP_03688 [Helicobacter pylori HPKX_438_AG0C1] Length = 272 Score = 42.0 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 76/245 (31%), Gaps = 2/245 (0%) Query: 28 VFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSE 87 + I L + + S L +P I I+P + L+ E Sbjct: 24 ISSIVLLISIASVTLVIKVSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHE 83 Query: 88 LVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKS 147 L++ ++G+S ++ FV S+L+ ++ + + + ++Q KD D Sbjct: 84 LLVFFSLGVSPKKMTKAFVPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIR 143 Query: 148 DIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVK 207 +++ + +++ + + + + + + Sbjct: 144 AGE--FGQKLGDWLVYVDKAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNL 201 Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 K + G + L++ K+ F + + Y K +F +N Sbjct: 202 YKGHAYFTQGDKMRKVDFEELHLRNKLKSFNSNDAAYLQGTDYLGYWKKAFGKNANKNQK 261 Query: 268 YRAET 272 R Sbjct: 262 RRFSQ 266 >gi|268679754|ref|YP_003304185.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] gi|268617785|gb|ACZ12150.1| permease YjgP/YjgQ family protein [Sulfurospirillum deleyianum DSM 6946] Length = 341 Score = 42.0 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 114/352 (32%), Gaps = 21/352 (5%) Query: 6 WRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ 65 RY K++ + ++ + + + L +P + Sbjct: 5 SRYLLKHFGALFSSLFFILFFITSIVFFI-KITALTAIIQMNFLELGTLYIYLLPRTLVY 63 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +P + + FNL++ +E ++ +G + ++ F++ + L + +L I + Sbjct: 64 TLPITFFIALCITLFNLSKENETIVLFTLGYNPQKIARLFLLLATGLSLLLILNIFVLIP 123 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 +++ + I K + S I + + D Sbjct: 124 ISKELNSNFIDYKKAEAKFNIKASEFGQKFSQWLVYIEKSDDQKHFSGVTLYQVPTPNED 183 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 ++ + + + + + N ++I + + Sbjct: 184 ERLILANNALIENTDGKLRLNLEEGKIFEFKKNEIEQINFERMHINSQPKAGIGTIQSV- 242 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + +F N + + F ++I L +A TLIA S+ + R N+ Sbjct: 243 ------------KEYWNGVFVNSKRAYELAFFLLIALFPLASTLIALSIGIVTYRYNKGG 290 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I +A + F+ + T+ + P +A L+ ILT ++ I L+ Sbjct: 291 IYIAM-FATIFIYFAAATLFST------WHPQSAPLVVFILTFFIAYRIYLK 335 >gi|216263485|ref|ZP_03435480.1| conserved hypothetical integral membrane protein [Borrelia afzelii ACA-1] gi|215980329|gb|EEC21150.1| conserved hypothetical integral membrane protein [Borrelia afzelii ACA-1] Length = 390 Score = 42.0 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + N+S + +FY I +PL ++ +A S+ L ++ + + I Sbjct: 283 NFKPYQNRSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGLYSNKKYSIILELVISII 342 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P ++ I ++ L+ Sbjct: 343 ICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRL 387 >gi|219684946|ref|ZP_03539887.1| conserved hypothetical integral membrane protein [Borrelia garinii PBr] gi|219671684|gb|EED28740.1| conserved hypothetical integral membrane protein [Borrelia garinii PBr] Length = 429 Score = 42.0 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + +KS + +FY I +PL ++ +A S+ + +R + + I Sbjct: 322 NFKPYQDKSMKQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISII 381 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P ++ I ++ L+ Sbjct: 382 ICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRL 426 >gi|325117279|emb|CBZ52831.1| hypothetical protein NCLIV_026200 [Neospora caninum Liverpool] Length = 3000 Score = 42.0 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 24/320 (7%), Positives = 81/320 (25%), Gaps = 27/320 (8%) Query: 40 MGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW 99 + + + S S + ++P ++ ++ F + + R Sbjct: 2186 LRDNFDLSFSESFFYTM-----VFYALVPIALPILVTIIMFII-------VYRVCAWYRK 2233 Query: 100 QLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQ 159 + + + + E+ + +I ++ + Sbjct: 2234 STQRKLELLKQTMQYGLYSLAQQLKEKYEEDRVFMIFRYIVLPGESIFRRAAKFMEDMIP 2293 Query: 160 QDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRI 219 + + T + K A + + + +++ + Sbjct: 2294 IYVTVLFFIYSSTTRNMLSLLDCTYIDFGRAHQAKYFLRAAMSVECTNIWNGPYFKFFAV 2353 Query: 220 PIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIV 279 I +I I + F + E K F + + + E + Sbjct: 2354 GIV-GLVVWSIGIPLSCFLVLYFNRKRLNSRETRLKYGFLHNGFVKKYWYWEMVVFARK- 2411 Query: 280 IPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP--- 336 + + + + ++ R+ + + + I + + F K L Sbjct: 2412 ----FLVIVVSSVALIPSADRNGS---RIWLAVVIAVIFLIIHLVTQPFDKRSYLTLDRL 2464 Query: 337 ---VAAALIPVILTISLSIL 353 + ++ +++ I Sbjct: 2465 ENHSMSIWTITLIVLAMMIG 2484 >gi|90403464|dbj|BAE91930.1| hypothetical transmembrane protein [Brevundimonas diminuta] Length = 81 Score = 41.6 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 1/75 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 ++ RY F+ + + + + + + E S+ L +P +I Sbjct: 3 LIQRYLFRQIGLPIVAAVAALAGIGLLSQSLDQLEVIVER-GQSVWVMVKLTLLALPQLI 61 Query: 64 QQIIPFITLVVNIVV 78 I+P V ++ Sbjct: 62 AVILPIGLFVGALIA 76 >gi|195952581|ref|YP_002120871.1| permease-like [Hydrogenobaculum sp. Y04AAS1] gi|195932193|gb|ACG56893.1| permease-like [Hydrogenobaculum sp. Y04AAS1] Length = 353 Score = 41.6 bits (95), Expect = 0.18, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 90/295 (30%), Gaps = 4/295 (1%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L R+ K +L T L + L F+ ++ N S +P+++ Sbjct: 2 LLRFITKRFLFTIFLVYLSILALFFIYQIS---NFFITYHMKSPKILFQTILNFLPIVLF 58 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 + V+ L R ++ ++ GI I + PF++ S+L+ +++ Sbjct: 59 YTATINVSISVFVLSHYLKRIKMFLVPQSFGIPISHIFKPFIIVSLLISFGNLMLNEFFI 118 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + K + +K N + + + N ++ + I + Sbjct: 119 PNATKELKYIEHVYKKNQKYELGIARNLWIAKEKNNEKTFIGTSLATSNGLFYNIKIINV 178 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K + + + I + L I + + Sbjct: 179 KNNKFNYIIKAKKAIVKNGYMDLEQGIETSFSPFREIHFQTLHLKTEINPKDLNLWIKTP 238 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +S E++ K + + + + + F F + + M IA+ + Sbjct: 239 DEQSLTELV-KTAIVMRKEGLNMFPYISTFIFKLEFSFLPFLMVCIASFYIAKSQ 292 >gi|330443790|ref|YP_004376776.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] gi|328806900|gb|AEB41073.1| YjgP/YjgQ family protein [Chlamydophila pecorum E58] Length = 384 Score = 41.6 bits (95), Expect = 0.19, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 108/356 (30%), Gaps = 13/356 (3%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQ----- 65 +Y L + + L F+ + + N S + + Q Sbjct: 23 RYLLTKFWLSFIALLFLAFIFYTSVHHSLHAIKGNASFFISLSSLKLLLLYYLSQTVLKA 82 Query: 66 --IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + P + + + F++ E+++ +A G+S+ L+ P + ++ + + Sbjct: 83 DFLFPQLIAIAATLTLFSMQSKREVLLLQASGLSLKSLITPLIASGGIVTLILYANFQWL 142 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 EK I K+ K + + +K L N+I+ + Sbjct: 143 YPICEKTSITKEHSEKEIPRKHEDKVPALYLKDQSVLLYSSIDQKSLTLNNIFWIKSPKM 202 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 I K+I + + E K + + F K Sbjct: 203 IYHVEKLIFSTPSLPIGFNVTEFSDIPTGELTLSGFFDMKEFPEIEFGSYENPFSKIFSA 262 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAET------QFYFLIVIPLMLVAMTLIAASVSLE 297 E + +S + QFY++++ PL + +I A + L Sbjct: 263 GGKNRLSEFYLAIPWSAFGIGLSTKVPQRILLLLSQFYYMLISPLACITAIVIPAYLCLR 322 Query: 298 FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 FSR+ + + + + + S +L ++P+ + ++ Sbjct: 323 FSRTPKATLAYLIPLGVTNTFFVFLKAGVVLANSSVLPTFPVMMMPLCILSMVTYY 378 >gi|187918661|ref|YP_001884227.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] gi|119861509|gb|AAX17304.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] Length = 429 Score = 41.2 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 13/155 (8%), Positives = 48/155 (30%) Query: 204 DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSN 263 ++ ++ +E + + + + + + + + + Sbjct: 272 KELDMRNDLEEDLLHLNFSNTYLNYLYATNSIVDENYFLENLNYMYNLSLNYSPYEDLLA 331 Query: 264 IFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIIT 323 +FY I +PL ++ +A + + ++ + + I + + Sbjct: 332 KRSYALFYLEFYQKISLPLSVLFFIFLAFGMGMYSNKKYSIILELVISILICVFYWVMFI 391 Query: 324 IMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 K + P ++P + I +++ L+ Sbjct: 392 GGKVYTVQYAPNPFLVTVLPNVALIFAGLILFLRL 426 Score = 40.8 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 3/241 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + K L L + F+ + + + + + +P++I Sbjct: 11 YIITEFCKYFLITFLFFFFVFFINQILFFMRILLQNY-VPFFKAFIFVIYSLPMVIALSP 69 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PF L+ I+ + +E++ R+IGISI+ LL PF +++ + ++ + + G Sbjct: 70 PFAALLSVILTIYRFKLNNEILAFRSIGISIFDLLVPFFKLGVVIALIAFILNDFLLPLG 129 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + + + K+ + G K ++ + Sbjct: 130 SIGRLKIFNEIKEEIPHLILKP--YSSKQYGDLIFVSGEKSDTGYRNVTFFDNTRLKGYD 187 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + R+ Y L V+ +K Q Sbjct: 188 RIFMARELNIQKENYQVYFILNDVLSIALTEDESGFYDYFYADRMKYSIDQVTFSDSWLL 247 Query: 248 S 248 S Sbjct: 248 S 248 >gi|51599059|ref|YP_073247.1| hypothetical protein BG0833 [Borrelia garinii PBi] gi|51573630|gb|AAU07655.1| conserved hypothetical integral membrane protein [Borrelia garinii PBi] Length = 429 Score = 41.2 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + +KS + +FY I +PL ++ +A S+ + +R + + I Sbjct: 322 NFKPYQDKSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISII 381 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P ++ I ++ L+ Sbjct: 382 ICVFYWVMFIGGKVYTVQYAPNPIIITILPNLILIIAGAILFLRL 426 >gi|111115642|ref|YP_710260.1| hypothetical protein BAPKO_0860 [Borrelia afzelii PKo] gi|110890916|gb|ABH02084.1| hypothetical protein BAPKO_0860 [Borrelia afzelii PKo] Length = 429 Score = 41.2 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 40/105 (38%) Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + N+S + +FY I +PL ++ +A S+ L ++ + + I Sbjct: 322 NFKPYQNRSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGLYSNKKYSIILELVISII 381 Query: 314 SGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + + K + P+ ++P ++ I ++ L+ Sbjct: 382 ICVFYWVMFIGGKVYTVQYAPNPIIVTILPNLILIIAGAILFLRL 426 >gi|119953584|ref|YP_945794.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] gi|119862355|gb|AAX18123.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] Length = 429 Score = 40.8 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 74/242 (30%), Gaps = 3/242 (1%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y + K L L + F+ + + + + + +P+II Sbjct: 11 YIIIEFFKYFLITFLFFFFVFFINQILFFMRILLQNY-VPFLKAFIFVIYSLPMIIALSP 69 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 PF L+ I+ + +E++ R+IGISI+ LL PF +++ + + + + + G Sbjct: 70 PFAALLSVILTIYRFKLNNEILAFRSIGISIFNLLVPFFKLGVVIALISFITNDFLLPLG 129 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + + + K+ + G K ++ + Sbjct: 130 SIGRLKIFNEIKEEIPHLILKP--YSSKQYGDLIFVSGEKSETGYKNVTFFDNTRLKGYD 187 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 ++ R+ Y L V+ +K Q Sbjct: 188 RILMARELNIQKENYQVYFILNDVLSIALTEDESGFYDYFYADRMKYSIDQVTFSDSWLL 247 Query: 248 SF 249 S+ Sbjct: 248 SY 249 Score = 38.9 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 33/85 (38%) Query: 274 FYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 FY I +PL ++ +A + + ++ + + I + + K + Sbjct: 342 FYQKISLPLSVLFFIFLAFGMGMYSNKKYSIILELVISILICVFYWVMFIGGKVYTVQYS 401 Query: 334 LLPVAAALIPVILTISLSILILLQK 358 P ++P ++ I +++ L+ Sbjct: 402 PNPFLITVLPNVMLIFAGLILFLRL 426 >gi|157738400|ref|YP_001491084.1| hypothetical protein Abu_2200 [Arcobacter butzleri RM4018] gi|157700254|gb|ABV68414.1| conserved hypothetical membrane protein [Arcobacter butzleri RM4018] Length = 338 Score = 40.8 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 37/338 (10%), Positives = 101/338 (29%), Gaps = 17/338 (5%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L RY + T G + VI L + + + + + + +P II Sbjct: 3 LQRYLYSQLAITFFPIFFGLFFITAVIFLV-KISALTAIITVNFFELFRIFSYTIPDIIF 61 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 +P + ++ L+ EL + + G++ +++L F+ ++LL + ++V + Sbjct: 62 YTMPISFFISMVITLSKLSSEYELTVITSFGLNPFKILKIFLPLTLLLTLLLLVVSVGLI 121 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + K+ + + + I +N+++ED + + Sbjct: 122 PKSDFERKQFVNIKKNEANFNIKSGEFGQKFGDWLIFIN------DKKNNLYEDVKLLKV 175 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 K N + N + ++ + + N D Sbjct: 176 QKDNDQFVISKNAVLDNDNGVLSIRLDEGKAFLIDKEEFNQINYEAMYINDSISTAKTTV 235 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 + ++ + + + + + + + R + Sbjct: 236 FTTTYDYWKNNIKNKVDLDDLTFFI---------LTSFFPLMSLFLVITFGYFNPRYEKN 286 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 + Y + S + Y +I + L + + Sbjct: 287 -RAIMYSLISIVLYYVLIKSIGDKIFLHTLYIIPILWL 323 >gi|257457658|ref|ZP_05622825.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445044|gb|EEV20120.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 229 Score = 40.8 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 1/141 (0%) Query: 3 GILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 +L+ Y K L L + FV ++ + + A+L +P + Sbjct: 7 KLLFLYIVKEMLLYFFVCFLFLFFIFFVNNILLLAEDVLSKQ-APFKDVALLMLYSLPAV 65 Query: 63 IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINP 122 I PF L+ ++ E + A+GIS L+ P ++ +L+ I + + Sbjct: 66 IANAAPFAALIGTLMGIGRFVSDLEFLSMNALGISPRFLMVPVLLVGLLVSIVSFFTNDV 125 Query: 123 IATSGEKIGIDLIQQWKDNGD 143 + + + + Sbjct: 126 LLPASAVNFRRVYWDIATSTP 146 >gi|289678195|ref|ZP_06499085.1| permease YjgP/YjgQ [Pseudomonas syringae pv. syringae FF5] Length = 95 Score = 40.8 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I++RY + L T ++ + + Q ++ R+P + Sbjct: 2 IVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAAS-GALDPGVLFLIMGFRLPGFL 60 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISI 98 Q I+P + ++ + L SE+ + A G+S Sbjct: 61 QVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQ 95 >gi|331699837|ref|YP_004336076.1| hypothetical protein Psed_6121 [Pseudonocardia dioxanivorans CB1190] gi|326954526|gb|AEA28223.1| hypothetical protein Psed_6121 [Pseudonocardia dioxanivorans CB1190] Length = 457 Score = 40.8 bits (93), Expect = 0.36, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI-LLPVAAAL 341 + +MT IA ++ R + V G L+ + + G SG + A + Sbjct: 204 LFTSMTGIAVGLAAGSRRVGTRVLWVLGGYLCAVALHALWNGSATLGGSGTFITVYVAIM 263 Query: 342 IPVILTISLSILILLQKE 359 +PV + + I+ ++E Sbjct: 264 LPVFVATIVLIIWQRRRE 281 >gi|314922390|gb|EFS86221.1| DoxX protein [Propionibacterium acnes HL001PA1] gi|314965427|gb|EFT09526.1| DoxX protein [Propionibacterium acnes HL082PA2] gi|314982838|gb|EFT26930.1| DoxX protein [Propionibacterium acnes HL110PA3] gi|315091157|gb|EFT63133.1| DoxX protein [Propionibacterium acnes HL110PA4] gi|315094243|gb|EFT66219.1| DoxX protein [Propionibacterium acnes HL060PA1] gi|315104896|gb|EFT76872.1| DoxX protein [Propionibacterium acnes HL050PA2] gi|327329222|gb|EGE70982.1| DoxX family protein [Propionibacterium acnes HL103PA1] Length = 270 Score = 40.5 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Query: 281 PLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 ++ + + A + L F+R II + F+ + I K+ G G L + A Sbjct: 177 WVLGICECIAAVCIILGLFTRVAGAGIIAIMVLTLTFIFWGSFAIFKTMGFKGELELLLA 236 Query: 340 ALIPVILTISLSIL 353 A ++L + Sbjct: 237 ACGVLLLFLGAGGW 250 >gi|282853300|ref|ZP_06262637.1| DoxX protein [Propionibacterium acnes J139] gi|282582753|gb|EFB88133.1| DoxX protein [Propionibacterium acnes J139] Length = 268 Score = 40.5 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Query: 281 PLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAA 339 ++ + + A + L F+R II + F+ + I K+ G G L + A Sbjct: 175 WVLGICECIAAVCIILGLFTRVAGAGIIAIMVLTLTFIFWGSFAIFKTMGFKGELELLLA 234 Query: 340 ALIPVILTISLSIL 353 A ++L + Sbjct: 235 ACGVLLLFLGAGGW 248 >gi|237751254|ref|ZP_04581734.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372620|gb|EEO23011.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 342 Score = 40.5 bits (92), Expect = 0.42, Method: Composition-based stats. Identities = 34/322 (10%), Positives = 92/322 (28%), Gaps = 11/322 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 +L +Y + + F + +I L + S+ L +P Sbjct: 5 LLKKYVLRSIGEMFFPFFFVLFFIASIILLL-NIAMLTNGVKLSMIDLMQLYLYGIPANT 63 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 +I I+ L+ SE+++ ++G+S ++ + +L+ + + Sbjct: 64 FFVIALTFYSACILGLSKLSYESEMLVFFSLGVSPKDIIRILLPLCVLVSFVLCMFSFVM 123 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + ++ D I P ++ + ++ Sbjct: 124 TPNSKQAYKDFIS----------LKKNEINIDLKPGDFGQKIGDWLVYIDSKDKNVFHGL 173 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 + N KD + + ++E N I+ + Sbjct: 174 VLYANTTEQIKDNFIIAKTGKIENRQGILELVLYDGDAYFNDKDFLQKIEFKEMIVRNFL 233 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 ++ + S + + +Q + + PL+ + + L + F ++ Sbjct: 234 DGTQDSDYNVFTYWASAFQGDYKQLKRFSQSFCTSLFPLVSIFLILFFGIKNPRFHKNYA 293 Query: 304 PRIIVAYGIFSGFMLYTIITIM 325 ++ G F +Y + Sbjct: 294 YFYVLGSGSFYLLAMYVLSMNF 315 >gi|327334822|gb|EGE76533.1| DoxX family protein [Propionibacterium acnes HL097PA1] Length = 272 Score = 40.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 Y + ++ + + A + L F+R II + F+ + I K+ G G Sbjct: 173 YAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGE 232 Query: 334 LLPVAAALIPVILTISLSIL 353 L + AA ++L + Sbjct: 233 LELLLAACGVLLLFLGAGGW 252 >gi|315082152|gb|EFT54128.1| DoxX protein [Propionibacterium acnes HL078PA1] Length = 268 Score = 40.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 Y + ++ + + A + L F+R II + F+ + I K+ G G Sbjct: 169 YAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGE 228 Query: 334 LLPVAAALIPVILTISLSIL 353 L + AA ++L + Sbjct: 229 LELLLAACGVLLLFLGAGGW 248 >gi|313802721|gb|EFS43939.1| DoxX protein [Propionibacterium acnes HL110PA2] gi|313806379|gb|EFS44886.1| DoxX protein [Propionibacterium acnes HL087PA2] gi|313817533|gb|EFS55247.1| DoxX protein [Propionibacterium acnes HL046PA2] gi|313824098|gb|EFS61812.1| DoxX protein [Propionibacterium acnes HL036PA2] gi|313826465|gb|EFS64179.1| DoxX protein [Propionibacterium acnes HL063PA1] gi|314961352|gb|EFT05453.1| DoxX protein [Propionibacterium acnes HL002PA2] gi|314989070|gb|EFT33161.1| DoxX protein [Propionibacterium acnes HL005PA3] gi|315078380|gb|EFT50411.1| DoxX protein [Propionibacterium acnes HL053PA2] gi|315082705|gb|EFT54681.1| DoxX protein [Propionibacterium acnes HL027PA2] gi|315086064|gb|EFT58040.1| DoxX protein [Propionibacterium acnes HL002PA3] gi|315087649|gb|EFT59625.1| DoxX protein [Propionibacterium acnes HL072PA1] gi|327333303|gb|EGE75023.1| DoxX family protein [Propionibacterium acnes HL096PA3] Length = 270 Score = 40.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 Y + ++ + + A + L F+R II + F+ + I K+ G G Sbjct: 171 YAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGE 230 Query: 334 LLPVAAALIPVILTISLSIL 353 L + AA ++L + Sbjct: 231 LELLLAACGVLLLFLGAGGW 250 >gi|313772787|gb|EFS38753.1| DoxX protein [Propionibacterium acnes HL074PA1] gi|313810927|gb|EFS48641.1| DoxX protein [Propionibacterium acnes HL083PA1] gi|313815335|gb|EFS53049.1| DoxX protein [Propionibacterium acnes HL059PA1] gi|313828773|gb|EFS66487.1| DoxX protein [Propionibacterium acnes HL063PA2] gi|313831692|gb|EFS69406.1| DoxX protein [Propionibacterium acnes HL007PA1] gi|313840383|gb|EFS78097.1| DoxX protein [Propionibacterium acnes HL086PA1] gi|314916050|gb|EFS79881.1| DoxX protein [Propionibacterium acnes HL005PA4] gi|314917202|gb|EFS81033.1| DoxX protein [Propionibacterium acnes HL050PA1] gi|314921701|gb|EFS85532.1| DoxX protein [Propionibacterium acnes HL050PA3] gi|314955039|gb|EFS99445.1| DoxX protein [Propionibacterium acnes HL027PA1] gi|314959078|gb|EFT03180.1| DoxX protein [Propionibacterium acnes HL002PA1] gi|314977034|gb|EFT21129.1| DoxX protein [Propionibacterium acnes HL045PA1] gi|315101991|gb|EFT73967.1| DoxX protein [Propionibacterium acnes HL046PA1] gi|327331315|gb|EGE73054.1| DoxX family protein [Propionibacterium acnes HL096PA2] gi|327450249|gb|EGE96903.1| DoxX protein [Propionibacterium acnes HL043PA2] gi|327454517|gb|EGF01172.1| DoxX protein [Propionibacterium acnes HL087PA3] gi|327456587|gb|EGF03242.1| DoxX protein [Propionibacterium acnes HL083PA2] gi|328755569|gb|EGF69185.1| DoxX protein [Propionibacterium acnes HL087PA1] gi|328756897|gb|EGF70513.1| DoxX protein [Propionibacterium acnes HL025PA2] gi|328761128|gb|EGF74672.1| DoxX family protein [Propionibacterium acnes HL099PA1] Length = 270 Score = 40.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 Y + ++ + + A + L F+R II + F+ + I K+ G G Sbjct: 171 YAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGE 230 Query: 334 LLPVAAALIPVILTISLSIL 353 L + AA ++L + Sbjct: 231 LELLLAACGVLLLFLGAGGW 250 >gi|289424505|ref|ZP_06426288.1| DoxX protein [Propionibacterium acnes SK187] gi|289428911|ref|ZP_06430591.1| DoxX protein [Propionibacterium acnes J165] gi|289155202|gb|EFD03884.1| DoxX protein [Propionibacterium acnes SK187] gi|289157912|gb|EFD06135.1| DoxX protein [Propionibacterium acnes J165] gi|313793190|gb|EFS41257.1| DoxX protein [Propionibacterium acnes HL110PA1] gi|313814574|gb|EFS52288.1| DoxX protein [Propionibacterium acnes HL025PA1] gi|313822006|gb|EFS59720.1| DoxX protein [Propionibacterium acnes HL036PA1] gi|314926583|gb|EFS90414.1| DoxX protein [Propionibacterium acnes HL036PA3] gi|314964602|gb|EFT08702.1| DoxX protein [Propionibacterium acnes HL082PA1] gi|314980304|gb|EFT24398.1| DoxX protein [Propionibacterium acnes HL072PA2] gi|314987389|gb|EFT31480.1| DoxX protein [Propionibacterium acnes HL005PA2] gi|315106309|gb|EFT78285.1| DoxX protein [Propionibacterium acnes HL030PA1] gi|327445220|gb|EGE91874.1| DoxX protein [Propionibacterium acnes HL013PA2] gi|327457139|gb|EGF03794.1| DoxX protein [Propionibacterium acnes HL092PA1] gi|328758420|gb|EGF72036.1| DoxX protein [Propionibacterium acnes HL020PA1] gi|332674653|gb|AEE71469.1| hypothetical protein PAZ_c02660 [Propionibacterium acnes 266] Length = 268 Score = 40.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 Y + ++ + + A + L F+R II + F+ + I K+ G G Sbjct: 169 YAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGE 228 Query: 334 LLPVAAALIPVILTISLSIL 353 L + AA ++L + Sbjct: 229 LELLLAACGVLLLFLGAGGW 248 >gi|295129814|ref|YP_003580477.1| DoxX protein [Propionibacterium acnes SK137] gi|291375253|gb|ADD99107.1| DoxX protein [Propionibacterium acnes SK137] gi|313765297|gb|EFS36661.1| DoxX protein [Propionibacterium acnes HL013PA1] gi|313834426|gb|EFS72140.1| DoxX protein [Propionibacterium acnes HL056PA1] gi|314931092|gb|EFS94923.1| DoxX protein [Propionibacterium acnes HL067PA1] gi|314969701|gb|EFT13799.1| DoxX protein [Propionibacterium acnes HL037PA1] gi|314974767|gb|EFT18862.1| DoxX protein [Propionibacterium acnes HL053PA1] gi|314985480|gb|EFT29572.1| DoxX protein [Propionibacterium acnes HL005PA1] gi|315097315|gb|EFT69291.1| DoxX protein [Propionibacterium acnes HL038PA1] gi|315099502|gb|EFT71478.1| DoxX protein [Propionibacterium acnes HL059PA2] gi|315110086|gb|EFT82062.1| DoxX protein [Propionibacterium acnes HL030PA2] gi|327447305|gb|EGE93959.1| DoxX protein [Propionibacterium acnes HL043PA1] Length = 268 Score = 40.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 Y + ++ + + A + L F+R II + F+ + I K+ G G Sbjct: 169 YAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGE 228 Query: 334 LLPVAAALIPVILTISLSIL 353 L + AA ++L + Sbjct: 229 LELLLAACGVLLLFLGAGGW 248 >gi|50841737|ref|YP_054964.1| hypothetical protein PPA0245 [Propionibacterium acnes KPA171202] gi|50839339|gb|AAT82006.1| hypothetical protein PPA0245 [Propionibacterium acnes KPA171202] Length = 268 Score = 40.5 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 275 YFLIVIPLMLVAMTLIAASVSLE-FSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 Y + ++ + + A + L F+R II + F+ + I K+ G G Sbjct: 169 YAQSGVWVLGICECIAAVCIILGLFTRVAGAGIIAIMVLSLTFIFWGSFAIFKTMGFKGE 228 Query: 334 LLPVAAALIPVILTISLSIL 353 L + AA ++L + Sbjct: 229 LELLLAACGVLLLFLGAGGW 248 >gi|207108562|ref|ZP_03242724.1| hypothetical protein HpylH_03299 [Helicobacter pylori HPKX_438_CA4C1] Length = 206 Score = 40.5 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 62/194 (31%), Gaps = 2/194 (1%) Query: 46 YSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPF 105 S L +P I I+P + L+ EL++ ++G+S ++ F Sbjct: 4 VSFLDLVQLFLYSLPGTIFFILPITFFAACALGLSRLSYDHELLVFFSLGVSPKKMTKAF 63 Query: 106 VVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 V S+L+ ++ + + + ++Q KD D +++ Sbjct: 64 VPLSLLVSAILLVFSLILIPTSKSAYYGFLRQKKDKIDINIRAGE--FGQKLGDWLVYVD 121 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 + +++ + + + + + + K + G + Sbjct: 122 KAENNSYDNLVLFSNKSLSQESFILAQKGNINNQNGVFELNLYKGHAYFTQGDKMRKVDF 181 Query: 226 TTLNIPIKMDGFQK 239 L++ K+ F Sbjct: 182 EELHLRNKLKSFNS 195 >gi|153827726|ref|ZP_01980393.1| membrane protein, putative [Vibrio cholerae MZO-2] gi|149737797|gb|EDM52702.1| membrane protein, putative [Vibrio cholerae MZO-2] Length = 144 Score = 40.1 bits (91), Expect = 0.52, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 1/74 (1%) Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 RA+ + + I + + + +T++ +S R + + I + ++ KS Sbjct: 38 RRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFAK-MGPAILIYLTYFLALSATKS 96 Query: 328 FGKSGILLPVAAAL 341 + G L + Sbjct: 97 AIEDGSLPVIIGLW 110 >gi|317481020|ref|ZP_07940099.1| drug efflux protein [Bacteroides sp. 4_1_36] gi|316902733|gb|EFV24608.1| drug efflux protein [Bacteroides sp. 4_1_36] Length = 798 Score = 40.1 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 68/256 (26%), Gaps = 10/256 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQN----QMGELPNYSISRGAVLAATRV 59 IL R K +L L LV + L+E + +++ ++A V Sbjct: 412 ILHRRNLKAFLSVLAATLTTMGALVIIFFLDEKIRLNLQDFAAVVIINLAVSLMVALFFV 471 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P +I++I + + R +++ + ++ F V + Sbjct: 472 PSMIEKI------GLVRRITGKKRRLVLPGLTQTFKTRLGRIFRRFPVYFSCCYSALIRF 525 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + + + + W N + + P Sbjct: 526 LCRWRWAVCLLLLLGFGLPVFLLPDKLEGGGKWEAAYNKVFGSDTYKESVKPIVDKALGG 585 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + +K + ++ L + + + T L+ ++ F Sbjct: 586 SLRLFIQKVYEGSYFTRNEEVVLYANANLPNGSTLEQMNTLMKRMETYLSRFKEIRQFHT 645 Query: 240 FSEQFASRSFYEIIKK 255 S KK Sbjct: 646 SIYSPRRASMQIYFKK 661 >gi|149193964|ref|ZP_01871062.1| hypothetical protein CMTB2_02728 [Caminibacter mediatlanticus TB-2] gi|149135917|gb|EDM24395.1| hypothetical protein CMTB2_02728 [Caminibacter mediatlanticus TB-2] Length = 323 Score = 40.1 bits (91), Expect = 0.55, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 90/312 (28%), Gaps = 1/312 (0%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y +L L ++ +I + + + + +P I+ + Sbjct: 7 YILNQFLPLFLTIFFVISAIISLIYII-TISNITSKIQITFIELLKFYILSMPQILLITL 65 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 + I ++ L+ T EL+ ++G LLNP ++ +ILL + ++ Sbjct: 66 AISFFISAINLYSKLSETQELIALFSLGFKPKTLLNPILLLAILLTFINLFILFISIPYA 125 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + +L + K Q + G + +++ + I + Sbjct: 126 KMNFNNLKNEKKQEAKFNFQSSQVSQQFGDWVIFANKGKNNSFTKIYLYSPKENKFIISQ 185 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 N + K++ L Q ++ N + I + F+ + + Sbjct: 186 NAQLQNKNSVLNFALTIGNIYDFNKSMQIKFNKMEINQLIPKVKISIFNFKDYFKYNKKE 245 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + + + I + VSL +I Sbjct: 246 FAKYLPIALLPITLFFFIPLISFFHPRLNKSHPLFYAITILSIYSIVSLSNKNFILSILI 305 Query: 308 VAYGIFSGFMLY 319 G +LY Sbjct: 306 SVLFFIIGGILY 317 >gi|257457657|ref|ZP_05622824.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445043|gb|EEV20119.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 116 Score = 39.7 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 36/111 (32%), Gaps = 3/111 (2%) Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQF--YFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S +++ K + + + IP L+A ++S + + Sbjct: 1 MSSFDLYKDIKEKQTQDEDKRILNLYWMEFHKKFSIPFGAFFFVLLAFAIS-SAGKVHNQ 59 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 G+ + + ++ +A +P I+ + S+++L Sbjct: 60 GAGFFLGLLIAVAYWALFMGGQTLCLRLNWNGTSAMWVPNIMVFAASVVLL 110 >gi|32266101|ref|NP_860133.1| hypothetical protein HH0602 [Helicobacter hepaticus ATCC 51449] gi|32262150|gb|AAP77199.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 339 Score = 39.7 bits (90), Expect = 0.68, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 101/348 (29%), Gaps = 21/348 (6%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 RY F + + F L + + V+ L +I + + S L +P + I Sbjct: 4 RYLFMSFAQIFFPFFLVLLFIASVVLLIDIAGR-TYVIKMSFIDLGTLFLYLIPGSLFFI 62 Query: 67 IPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATS 126 IP ++ L EL++ ++G ++ F+ ++L I + + Sbjct: 63 IPITFFAALVLSVAKLTYDYELMVCFSLGAKPLDIVKFFLPITLLATIILFVFSLVMLPL 122 Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 + + Q K + D ++ + + K+I ++ + Sbjct: 123 ANSASKNFVAQKKADIDVNIKSGEFGQKLGDWLVYVDSAHKRIYKNLILFSENGFEGDTF 182 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + + + + + + L + + Sbjct: 183 IVAESGKTNNNQGLFELNLQ----------EGSAYFASPEELKRVDYHQMSVRQNVSEPQ 232 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 Y++ + S+ R Q + + PL + + + + F + Sbjct: 233 LRSYDLFEYWGNVFTSDSHQKPRKLAQAVMVSLFPLTSLFLVPLFGIANPRFHSNMSYFY 292 Query: 307 IVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILI 354 ++A + + P+ +I L +LS + Sbjct: 293 VIASVALYFVLTHIASEHF----------PLIGMIIIPFLWCALSFGL 330 >gi|238499107|ref|XP_002380788.1| ferric reductase transmembrane component 4 precursor, putative [Aspergillus flavus NRRL3357] gi|220692541|gb|EED48887.1| ferric reductase transmembrane component 4 precursor, putative [Aspergillus flavus NRRL3357] Length = 794 Score = 39.7 bits (90), Expect = 0.72, Method: Composition-based stats. Identities = 20/276 (7%), Positives = 76/276 (27%), Gaps = 21/276 (7%) Query: 87 ELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQK 146 E + + + ++ +LV+ +A + Q Sbjct: 200 ESPVLLSHSYYKRAHKSYRFGWGLMGYWGGILVLGMMAKLMALQSMHRKQTKPKAMTSVL 259 Query: 147 SDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKV 206 + + + I +++ + + + + + ++ + Sbjct: 260 HYLRTYFVVPASFAPILPHHQQLYYWHTVPRRLDLLIVLGFWALCIILACVDYQSFSGNI 319 Query: 207 KLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF-------------------ASR 247 ++ V + + + + F + F + Sbjct: 320 EMSSVFQQNWQYSSDRTGILSYACLPFLWLFAGRNNIFLWATNFSVQSFNIFHRHVAWAC 379 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + I+ +++S + +++ + + + + M+ + R + Sbjct: 380 TILAIVHSINYSVVFAYYGEFQSVWLQEYWYMGVVATILMSFMLVQSLTMLRRIGYETFL 439 Query: 308 VAYGIFSGFMLYTIITIMKSFGK--SGILLPVAAAL 341 + + +F+ ++Y + G +G L P+ A Sbjct: 440 IIHIVFAIVVVYALFRHTSFDGTKWNGYLWPMVAIW 475 >gi|6636502|gb|AAF20202.1|AF205944_1 P-Type cation-transporting ATPase [Blastocladiella emersonii] Length = 1078 Score = 39.7 bits (90), Expect = 0.74, Method: Composition-based stats. Identities = 15/247 (6%), Positives = 70/247 (28%), Gaps = 10/247 (4%) Query: 116 TVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHI 175 T++ + P + L + + + + + + + G + + Sbjct: 804 TLMKLQPRRPVDGESIEHLRARREFDNRFKNFAGGDTTDENEIVRPLTFGERMKRLTSGE 863 Query: 176 WEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMD 235 + + + ++ + + ++ + + + + + I Sbjct: 864 FWSKWAFASADGDMLVDWNTLSWSYLEAGVIQYVGAQIAFFVVFYMYQTKDKVQLKITPT 923 Query: 236 GFQKFSEQFASR-----SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLI 290 + + + ++ F++ + L+ Sbjct: 924 DLFNCASNEGWTGKKSCTLGNGMVYSVADQNESLAQAQSVWFFGIFVMQAWNLFACKCLM 983 Query: 291 AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISL 350 ++ ++ ++ + G+ ++ I +FG S L P+ +++ + Sbjct: 984 SSPFTMHVLKNKHTFSSLVGGLAISVLVVYCPGINTAFGCSSWLNPLY-----ILIPFGV 1038 Query: 351 SILILLQ 357 +++ L Sbjct: 1039 GMVLFLY 1045 >gi|260791574|ref|XP_002590804.1| hypothetical protein BRAFLDRAFT_78220 [Branchiostoma floridae] gi|229276000|gb|EEN46815.1| hypothetical protein BRAFLDRAFT_78220 [Branchiostoma floridae] Length = 875 Score = 39.3 bits (89), Expect = 0.91, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 72/242 (29%), Gaps = 8/242 (3%) Query: 97 SIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQIS 156 S++++L+ V I + +I + +DL + D K ++ Sbjct: 18 SVFRMLSDTQVPYFTAIIIVLCLIPLGNIYNDAKILDLQHKRVDLHHKMVEYRRQKVEFM 77 Query: 157 NPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQY 216 ++ EN + K+ + + A ++ V+EY + Sbjct: 78 QTILTATDTYTQVTQENGWLWGVKRVITHTVQKLKYTPEQVHAY----IGRMMDVIEYSW 133 Query: 217 GRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF-- 274 G + + + I+ +K +F ++R Q Sbjct: 134 GLVLCFLVAAVVVTVIRWLDRRKAYIFAMMLTFVLYTYVYFNLQPIPDMPDWRWMAQPIQ 193 Query: 275 -YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGI 333 + P +AA + L R+ R + +GF L+ + G + Sbjct: 194 DHDSPNTPFSWTVFITVAAVLVL-LIRAVDIRQAFTIAMVAGFALFVFAYSLLHLGGTFA 252 Query: 334 LL 335 L Sbjct: 253 LS 254 >gi|294670273|ref|ZP_06735166.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308010|gb|EFE49253.1| permease, YjgP/YjgQ family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 87 Score = 39.3 bits (89), Expect = 0.94, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 22/55 (40%) Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKE 359 + GI G + + + + AAA++P + ++ ++ ++E Sbjct: 31 GLETFAGICLGLAFHFAGRLFGFTSQLYGVPAFAAAMLPTAAFAAWAVWLIRKQE 85 >gi|224438206|ref|ZP_03659141.1| hypothetical protein HcinC1_09510 [Helicobacter cinaedi CCUG 18818] Length = 339 Score = 39.3 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 98/343 (28%), Gaps = 14/343 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y F + + F L + V+ L +I + + S L +P + Sbjct: 2 LKKYLFSSFAQIFFPFFLVLFFIASVVLLIDIAGR-TYVVKMSFLDLGTLFMYLIPSSLF 60 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IIP ++ L EL++ ++G ++ F+ ++L + + + Sbjct: 61 FIIPITFFAALVLGISRLAYDYELMVCFSLGSKPLDMVRFFLPITLLATLVLFVFSFILL 120 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + Q K + D ++ + + + ++ + Sbjct: 121 PLTTSASKNFVAQKKADIDVNIKPGEFGQKLGDWLVYVDSVDNRKYQNLVLFSENGFEGD 180 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + +L Y P + N + Sbjct: 181 T-----FIVAQSGQTNNNQGLFELNLTSGKAYFAAPEEIKRVDYNTMSVRQNVSE----- 230 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S Y++I + R Q + + PL+ + + + + F RSN Sbjct: 231 PQLSGYDLIAYWKEAFSLESRQKLRKLAQAVMVSLFPLVSIFLIPLFGIANPRF-RSNMS 289 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 V + F+L I +F G++ Sbjct: 290 YFYVIGSVALYFVLMYI--ASDNFALVGMISIPILWFFGGFFL 330 >gi|313144652|ref|ZP_07806845.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129683|gb|EFR47300.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 341 Score = 39.3 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 98/343 (28%), Gaps = 14/343 (4%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQ 64 L +Y F + + F L + V+ L +I + + S L +P + Sbjct: 4 LKKYLFSSFAQIFFPFFLVLFFIASVVLLIDIAGR-TYVVKMSFLDLGTLFMYLIPSSLF 62 Query: 65 QIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIA 124 IIP ++ L EL++ ++G ++ F+ ++L + + + Sbjct: 63 FIIPITFFAALVLGISRLAYDYELMVCFSLGSKPLDMVRFFLPITLLATLVLFVFSFILL 122 Query: 125 TSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITI 184 + + Q K + D ++ + + + ++ + Sbjct: 123 PLTTSASKNFVAQKKADIDVNIKPGEFGQKLGDWLVYVDSVDNRKYQNLVLFSENGFEGD 182 Query: 185 DKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQF 244 + +L Y P + N + Sbjct: 183 T-----FIVAQSGQTNNNQGLFELNLTSGKAYFAAPEEIKRVDYNTMSVRQNVSE----- 232 Query: 245 ASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQP 304 S Y++I + R Q + + PL+ + + + + F RSN Sbjct: 233 PQLSGYDLIAYWKEAFSLESRQKLRKLAQAVMVSLFPLVSIFLIPLFGIANPRF-RSNMS 291 Query: 305 RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 V + F+L I +F G++ Sbjct: 292 YFYVIGSVALYFVLMYI--ASDNFALVGMISIPILWFFGGFFL 332 >gi|312131631|ref|YP_003998971.1| proteiN-disulfide reductase [Leadbetterella byssophila DSM 17132] gi|311908177|gb|ADQ18618.1| Protein-disulfide reductase [Leadbetterella byssophila DSM 17132] Length = 653 Score = 38.9 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 5/78 (6%) Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 M ++ +VS + + YGI + + I + G S L ++ Sbjct: 220 FMPCIYPIMPMTVSFFTKQKGGKFKAIFYGISIMVIFALMGLITMALGASF-LNALSTHW 278 Query: 342 IPVILTISL----SILIL 355 IP ++ L +L Sbjct: 279 IPNLIFFLLFIAFGFALL 296 >gi|168204628|ref|ZP_02630633.1| hypothetical protein AC3_0845 [Clostridium perfringens E str. JGS1987] gi|170663786|gb|EDT16469.1| hypothetical protein AC3_0845 [Clostridium perfringens E str. JGS1987] Length = 721 Score = 38.9 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 102/348 (29%), Gaps = 28/348 (8%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 YF K + L+G + + F+ L + + + S V P I I Sbjct: 16 YFSKSNFIIYGFRLVGWVFIKFLGFLVDKLEDVVK------SVTVVTDFFNSPEITNLIN 69 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 F L+ ++V + +LVI++ S + + I++ + Sbjct: 70 KFSPLLYLLLVASIIFIGYQLVINKKFDRSKLPMNIILALCIIVVMPLAMS--------- 120 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 N + ++ I +D T ID K Sbjct: 121 -------KANILTNKVIGEIQGESQFSDQIISNNVTDLYLLDQANFPIKDDGTVGDIDPK 173 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 N + + I D+ K+ ++ I K LN + + + ++ Sbjct: 174 NNVGNNITKINPIEEIDRDKVNNKKVFENEIIFDSKGEAKLNKIVGLFKWDDEYYRYH-- 231 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 + + + + + I + V T +A + R Q Sbjct: 232 --INYMTIIVTLLITAFVMIFTSVKMIKLSIELAFSKVMTTFVAVADLSNGQRMRQSVNG 289 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILIL 355 + IF + ++ + G + L + + + + +I ++ Sbjct: 290 I-ISIFVAMISTMLMLKLYILGTAY-LSDKISGIGTICAMLGCAIFVI 335 >gi|332088229|gb|EGI93350.1| hypothetical protein SD15574_3352 [Shigella dysenteriae 155-74] Length = 238 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 57/225 (25%), Gaps = 11/225 (4%) Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 L QQ + D ++ + N + + + +T Sbjct: 1 MYGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYT 60 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQK 239 S + D V L Y D N N+ + ++ + Sbjct: 61 STANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQ 120 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +K + + + L + M L+A S+S Sbjct: 121 SPNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKP 171 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + ++ + + Y + ++ +G + + + Sbjct: 172 RQGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 215 >gi|291276764|ref|YP_003516536.1| YjgP/YjgQ family permease [Helicobacter mustelae 12198] gi|290963958|emb|CBG39797.1| putative integral membrane protein, permease YjgP/YjgQ family [Helicobacter mustelae 12198] Length = 338 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 34/351 (9%), Positives = 96/351 (27%), Gaps = 22/351 (6%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y F + F + + V+ L + + + ++ +P + II Sbjct: 5 YLFGSIAQIFFPFFIVLFFISSVVLLIS-IANITLVVKMNFMDLLLVFLYLMPGTVFFII 63 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P ++ L+ EL++ ++G+S ++L F+ + ++ + + + Sbjct: 64 PITFFAACVLGLSRLSFDYELLVFFSLGVSPRKILAYFIPIAGIVSLVLLFFSLALIPLS 123 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + D I + + D ++ + I + ++ Sbjct: 124 KSAYSDFIAEKRTKIDVNIRAGDLGQKLGDWLVYIDSIKDNEYRDLVLFSGSDLGQESFV 183 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 R + + + L + + + + Sbjct: 184 VAQKGRVENLAGVFRLSLQ----------NGDAYFAKNNELQKVNFQNMMIQSEIKKINL 233 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S Y+++ + R +Q + PL + + + F R+ I Sbjct: 234 SSYDLVAYWKSA-FEGKKSQARRFSQAIMTSLFPLASIFFIPLFGIANPRFQRNLSYVYI 292 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 ++ + ++ + P + L +K Sbjct: 293 LSAVVGYFAGVHILSENA----------PFFGIFALPLAWFFLGYYFFRKK 333 >gi|167534874|ref|XP_001749112.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772536|gb|EDQ86187.1| predicted protein [Monosiga brevicollis MX1] Length = 346 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%) Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAAL 341 L + +A +S+ S + V I L +++ S S L + Sbjct: 258 LSVCQSVWLAGCLSVYLSVYLSVYLSVYLSICLSVSLSVCLSVCLSICLSIWLSIWLSIW 317 Query: 342 IPVILTISLSILILL 356 + + L L+ +LL Sbjct: 318 LSIYLAGWLAGWLLL 332 >gi|118388408|ref|XP_001027301.1| cation channel family protein [Tetrahymena thermophila] gi|89309071|gb|EAS07059.1| cation channel family protein [Tetrahymena thermophila SB210] Length = 1556 Score = 38.5 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 19/223 (8%), Positives = 57/223 (25%), Gaps = 5/223 (2%) Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 K + + + D+ + + + + ++ I ++ + + Sbjct: 91 HLKKDQNNLDKTSDSQNFNQYENRYGSKSVTFTSNLKIQNSRVTSSSQVSIHKKPNPYQG 150 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFAS 246 + I KV + + + L + ++ + Sbjct: 151 QEIFKKLYYNYTQIYEGK----DKVADQTNFPLIMKLKDIALKWVNSLQSRRQKVLNELA 206 Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRI 306 + ++ ++K H + + L + S + + Sbjct: 207 YNLINDKSFINDTSKGIQKHENLINATKNTIFHSWISQKVNCLCSCIPVFSPSNTYKFLW 266 Query: 307 IVAYGIFSGFMLYTI-ITIMKSFGKSGILLPVAAALIPVILTI 348 + F LY + I + I+ + IP L + Sbjct: 267 DLIQLFVIIFCLYFVPINFVFKMRFKDIIPLMLGWFIPAFLLV 309 >gi|290559791|gb|EFD93115.1| hypothetical protein BJBARM5_0125 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 782 Score = 38.5 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Query: 283 MLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI--ITIMKSFGKSGILLPVAAA 340 + + I + + + + + I + F++Y + + +G L + Sbjct: 106 TFIVLAFIGLILGILALVKSPMSVRLMGLIAALFLIYILFANDTGLTNAVNGFLHINILS 165 Query: 341 LIPVILT---ISLSILILLQ 357 ++P+IL I + I+++L+ Sbjct: 166 ILPIILGAVSILVIIVLILR 185 >gi|332086636|gb|EGI91776.1| hypothetical protein SB521682_3570 [Shigella boydii 5216-82] Length = 238 Score = 38.5 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 57/225 (25%), Gaps = 11/225 (4%) Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 L QQ + D ++ + N + + + +T Sbjct: 1 MYGRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYT 60 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTL-NIPIKMDGFQK 239 S + D V L Y D N N+ + ++ + Sbjct: 61 STANRTRIFRARSVDVVDPSTEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQ 120 Query: 240 FSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFS 299 +K + + + L + M L+A S+S Sbjct: 121 SPNVK---------RKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKP 171 Query: 300 RSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV 344 R + ++ + + Y + ++ +G + + + Sbjct: 172 RQGRFSTLLPLTLLFIAIFYG-GDVCRTLVANGAIPLIPGLWLVP 215 >gi|148271769|ref|YP_001221330.1| hypothetical protein CMM_0590 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829699|emb|CAN00615.1| conserved membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 138 Score = 38.5 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 26/63 (41%) Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + +F F+ + ++ G S P +ALI + + ++++ Sbjct: 40 LVSKLKHAGIGAGFLVVALFFAFIAFLVLVAAAILGLSEAFSPWLSALIVAGVFLLITVV 99 Query: 354 ILL 356 + L Sbjct: 100 LAL 102 >gi|170783145|ref|YP_001711479.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157715|emb|CAQ02917.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 138 Score = 38.5 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 26/63 (41%) Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSIL 353 + + + + +F F+ + ++ G S P +ALI + + ++++ Sbjct: 40 LVTKLKHAGIGAGFLVVALFFAFIAFLVLVAAAILGLSEAFSPWLSALIVAGVFLLITVV 99 Query: 354 ILL 356 + L Sbjct: 100 LAL 102 >gi|224418451|ref|ZP_03656457.1| hypothetical protein HcanM9_04150 [Helicobacter canadensis MIT 98-5491] gi|313141983|ref|ZP_07804176.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131014|gb|EFR48631.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 341 Score = 38.5 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 36/350 (10%), Positives = 100/350 (28%), Gaps = 20/350 (5%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y F + + + V+ I + + S L +PL+I +I Sbjct: 6 YLFHSFAQIFFPIFFVLFFIASVVIFIRIAG-VTFVVQISFFELLSLYFYTLPLMIFFVI 64 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 P V + L+ EL + A+G++ +++ F + L+ ++ + Sbjct: 65 PLSFFVACTLSLSRLSFDYELPVLFALGMNPSKIIKIFFPIAALVSFSLFILSLVLTPLS 124 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 + +++ K++ + ++ + + + EN + F Sbjct: 125 DTAYRQFLEERKNSININLQAGEFGQKLGDWLVYVQKSKEDSSYENIVLLSFAKEGGMIF 184 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASR 247 + + + + + + + + +D + R Sbjct: 185 SDNAKIVNQMGVMEAILEKGSIYRPKEDFVEKILFDTLIIRSSITAIDEVDLGVIGYWKR 244 Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 +FYE ++ +++ + + ++ R + I Sbjct: 245 AFYENDRQKKTLRNLSMYVMMSC------------FPLVSLFFFPLLGVKNPRYQKNYTI 292 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + G + P+ I I+ + L L+ + Sbjct: 293 LQAMGVIGIFYALMYLFASYL-------PLLGMFIFPIIWLLLGYLLFER 335 >gi|167621692|ref|YP_001672200.1| hypothetical protein Caul_5426 [Caulobacter sp. K31] gi|167351815|gb|ABZ74541.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 230 Score = 38.5 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 41/83 (49%) Query: 54 LAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLG 113 +AA +P + +P + +V L+ +SE+ A G S+ +++ PFVV +LLG Sbjct: 1 MAANLLPHYLGLALPVAFFIALFIVITTLSDSSEIDALLAGGRSLTRIVAPFVVIGVLLG 60 Query: 114 IFTVLVINPIATSGEKIGIDLIQ 136 +F+V+V + ++ Sbjct: 61 LFSVIVFGYLQPYSRYAFRSVMH 83 >gi|290770131|gb|ADD61891.1| putative protein [uncultured organism] Length = 1068 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 68/256 (26%), Gaps = 10/256 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQN----QMGELPNYSISRGAVLAATRV 59 IL R K +L L LV + L+E + +++ ++A V Sbjct: 412 ILHRRNLKAFLSVLAATLTTMGALVIIFFLDEKIRLNLQDFAAVVIINLAVSLMVALFFV 471 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P +I++I + + R +++ + ++ F V + Sbjct: 472 PSMIEKI------GLVRRITGKKRRLVLPGLTQTFKTRLGRIFRRFPVYFSCCYSALIRF 525 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + + + + W N + + P Sbjct: 526 LCRWRWAVCLLLLLGFGLPVFLLPGKLEGGGKWEAAYNKVFGSDTYKESVKPVVDKALGG 585 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + +K + ++ L + + + T L+ ++ F Sbjct: 586 SLRLFIQKVYEGSYFTRNEEVVLYANANLPNGSTLEQMNTLMKRMETYLSRFKEIRQFHT 645 Query: 240 FSEQFASRSFYEIIKK 255 S KK Sbjct: 646 SIYSPRRASMQIYFKK 661 >gi|270294413|ref|ZP_06200615.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275880|gb|EFA21740.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 1068 Score = 38.1 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 68/256 (26%), Gaps = 10/256 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQN----QMGELPNYSISRGAVLAATRV 59 IL R K +L L LV + L+E + +++ ++A V Sbjct: 412 ILHRRNLKAFLSVLAATLTTMGALVIIFFLDEKIRLNLQDFAAVVIINLAVSLMVALFFV 471 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P +I++I + + R +++ + ++ F V + Sbjct: 472 PSMIEKI------GLVRRITGKKRRLVLPGLTQTFKTRLGRIFRRFPVYFSCCYSALIRF 525 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + + + + W N + + P Sbjct: 526 LCRWRWAVCLLLLLGFGLPVFLLPDKLEGGGKWEAAYNKVFGSDTYKESVKPVVDKALGG 585 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + +K + ++ L + + + T L+ ++ F Sbjct: 586 SLRLFIQKVYEGSYFTRNEEVVLYANANLPNGSTLEQMNTLMKRMETYLSRFKEIRQFHT 645 Query: 240 FSEQFASRSFYEIIKK 255 S KK Sbjct: 646 SIYSPRRASMQIYFKK 661 >gi|326381958|ref|ZP_08203651.1| putative integral membrane c-type cytochrome biogenesis protein DipZ [Gordonia neofelifaecis NRRL B-59395] gi|326199384|gb|EGD56565.1| putative integral membrane c-type cytochrome biogenesis protein DipZ [Gordonia neofelifaecis NRRL B-59395] Length = 563 Score = 38.1 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 278 IVIPLMLVAMTLIAASVSLEFSRSN-QPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLP 336 V+P++ V +S R + + GI F L T++ + G L Sbjct: 20 CVLPMIPVIFITGGSSADEGRVRPGYGRALAIIVGIVVSFSLITLLGTL-VLAALG-LPS 77 Query: 337 VAAALIPVILTISLSILILL 356 ++L + + + +L+ Sbjct: 78 GLLRWTGIVLLVLIGLGMLI 97 >gi|149369519|ref|ZP_01889371.1| peptidase M28 [unidentified eubacterium SCB49] gi|149356946|gb|EDM45501.1| peptidase M28 [unidentified eubacterium SCB49] Length = 786 Score = 38.1 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 5/79 (6%) Query: 281 PLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 + L++ ++ + + + + VA + + + +I + G A Sbjct: 403 HWYIAFFVLLSVAICFKVYKRYKVKNNVADFYVAPLVFWFVINTAVAIVLRGA-----AY 457 Query: 341 LIPVILTISLSILILLQKE 359 I + S +LL++E Sbjct: 458 WIIPVFFGLFSFFMLLRQE 476 >gi|90418583|ref|ZP_01226495.1| putative two-component sensor histidine kinase [Aurantimonas manganoxydans SI85-9A1] gi|90338255|gb|EAS51906.1| putative two-component sensor histidine kinase [Aurantimonas manganoxydans SI85-9A1] Length = 548 Score = 38.1 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 21/97 (21%) Query: 276 FLIVIPLMLVAMTLI----AASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKS 331 ++ P+ +VA L+ V L R +L+T+ G + Sbjct: 140 RRLLFPMAVVAYALLKNRPVGPVGLRGMRRR------IATCVVAVLLWTLTVAFYVLGTA 193 Query: 332 GILLPVAAA-------LI--PVILTIS--LSILILLQ 357 G L P +A + P I + I +L++ Sbjct: 194 GWLPPFLSAGGTLTIVWMLVPAIALLLYAAGIALLVR 230 >gi|146165911|ref|XP_001015862.2| hypothetical protein TTHERM_00266270 [Tetrahymena thermophila] gi|146145304|gb|EAR95617.2| hypothetical protein TTHERM_00266270 [Tetrahymena thermophila SB210] Length = 3487 Score = 38.1 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 37/335 (11%), Positives = 93/335 (27%), Gaps = 13/335 (3%) Query: 14 LKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLV 73 L T + LV + + + + + I+ L PLI + Sbjct: 2784 LLFTFVQCAFLLALVIIFYASFLLVNIIKKER--INYLISLYLLPSPLISSCLFLMYFFQ 2841 Query: 74 VNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGID 133 + T + V ++ S + + I I + Sbjct: 2842 QTLTSTSLQVITCQTVGNQYYMQSQMSKQCYTDEYFRWFPLLILTFIFSTFIYPLIIFLV 2901 Query: 134 LIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHR 193 L + + + + + Q + G+K + + TS+ N + Sbjct: 2902 LYRNREKIYNLSRLVKVQNSVQIQKDQSLRDGSKMCSQDVQKVDFNTSVRSQNPNNNSNN 2961 Query: 194 KDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEII 253 ++ + Y +YG + + I ++ S ++I+ Sbjct: 2962 QNNRIIDKYQRFKTFYYKTYRRYGFLYFEFKPQYWWWEIMKMTMRQVIIILTQLSLFQIL 3021 Query: 254 KKMS--------FSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 +K+S +S YR + ++ + + + ++ +N Sbjct: 3022 EKVSLIILILFLYSLLQLRIQPYRNKKLNQIDHMLNALSIIIIILGL---YSQGITNDIH 3078 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA 340 + I G + + I+ +S + + Sbjct: 3079 KQILSIIIIGLKFFVLGFIILRLLESFTAQQIFSI 3113 >gi|253827767|ref|ZP_04870652.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511173|gb|EES89832.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 314 Score = 37.8 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 90/312 (28%), Gaps = 19/312 (6%) Query: 46 YSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPF 105 S L +PL+I +IP V + L+ EL + A+G++ +++ F Sbjct: 16 ISFFELLSLYFYTLPLMIFFVIPLSFFVACTLSLSRLSFDYELPVLFALGMNPSKIIKIF 75 Query: 106 VVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 + L+ ++ + + +++ K++ + ++ + + Sbjct: 76 FPIAALVSFSLFILSLVLTPLSDTAYRQFLEERKNSININLQAGEFGQKLGDWLVYVQKS 135 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 + EN + F + + + + + + + Sbjct: 136 KEDSSYENIVLLSFAKEGGMIFSDNAKIVNQMGVMEAILEKGSIYRPKEDFVEKILFDTL 195 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 + +D + R+FYE ++ +++ + Sbjct: 196 IIRSSITAIDEVDLGVIGYWKRAFYENDRQKKTLRNLSMYVMMSC------------FPL 243 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + ++ R + I+ G + P+ I I Sbjct: 244 VSLFFFPLLGVKNPRYQKNYTILQAMGVIGIFYALMYLFASYL-------PLLGMFIFPI 296 Query: 346 LTISLSILILLQ 357 + + L L+ + Sbjct: 297 IWLLLGYLLFER 308 >gi|58258975|ref|XP_566900.1| nicotinamide mononucleotide permease [Cryptococcus neoformans var. neoformans JEC21] gi|134107105|ref|XP_777865.1| hypothetical protein CNBA5620 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260563|gb|EAL23218.1| hypothetical protein CNBA5620 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223037|gb|AAW41081.1| nicotinamide mononucleotide permease, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 498 Score = 37.8 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 23/312 (7%), Positives = 76/312 (24%), Gaps = 17/312 (5%) Query: 48 ISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVV 107 + +P + + ++ + + A + QL Sbjct: 99 LVFFISYVLFEIPSNLF----IARVRPSLYLSGLCILWGGIAACMAATKNYSQLAGVRFA 154 Query: 108 GSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAK 167 ++ F V +++ ++ + + + Sbjct: 155 LGVVEAGFAPGVAFYLSSWYKRYELASRYSLYYTATAISGAFSGLLAGVITENLDGARGL 214 Query: 168 KILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT 227 + I E S + I + ++ + + + Sbjct: 215 RGWQWLFIIEGCGSSFLGFFTWFIMPDWPSTTRFLSPDERVLAAQRLAHDGLGNTAGAQG 274 Query: 228 LNIPIK-MDGFQKFSEQFASRSFYEII---KKMSFSNKSNIFHNYRAETQFYFLIVIPLM 283 + + + Y + + + + + I + + Sbjct: 275 HVGHWDALKMAVVDWRTWMFTALYMLCTGAQTIQYFVPTLIGALGWTGYLGQYRTIPLYA 334 Query: 284 LVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTI---------ITIMKSFGKSGIL 334 + ++ ++ R+ I +A + + F + + ++ +FG L Sbjct: 335 CAFLFILVFCWGADYFRAKPLFITIAASMGTVFFIVVTCVTQHMVQYVFLILAFGCVYAL 394 Query: 335 LPVAAALIPVIL 346 P+ +P IL Sbjct: 395 PPLILTWVPNIL 406 >gi|315452594|ref|YP_004072864.1| Integral membrane protein [Helicobacter felis ATCC 49179] gi|315131646|emb|CBY82274.1| Integral membrane protein [Helicobacter felis ATCC 49179] Length = 348 Score = 37.8 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 28/300 (9%), Positives = 86/300 (28%), Gaps = 13/300 (4%) Query: 46 YSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPF 105 S L +P + IIP ++ L+ EL++ ++GI+ Q++ F Sbjct: 44 LSALDLLQLYFYLLPGTLFFIIPITFFGACVIGLARLSYDHELLVFFSLGIAPRQIVRAF 103 Query: 106 VVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIG 165 + +++ ++ + + + ++ K+ D ++ + + Sbjct: 104 LPLCLVVSALLLVFSLILVPASKSAYYSFLRDKKERVDVNIQAGEFGQKLGDWLVYVGKS 163 Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 + + ++ T R + + + + Sbjct: 164 QNGVFGDLVLFSHSGLSTESFIIAKEGRIRNQNGLFELELDHGNAYFAAKGQVRKVHFKE 223 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 L + + + + + + K+ H + + + ++ + Sbjct: 224 LILKNKPALSERKDAAYLYG-------HDFIGYWGKAFGAHPNAHQQRRFTQAILVALFP 276 Query: 286 AMTLIAAS-VSLEFSRSNQP--RIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALI 342 +L + R + + V F+L + I + F G + + Sbjct: 277 LASLFCIPLFGIANPRYAKNLSYVYVLITTGIYFLL--MHIISQDFPLVGTISLPI-VWM 333 >gi|160891115|ref|ZP_02072118.1| hypothetical protein BACUNI_03562 [Bacteroides uniformis ATCC 8492] gi|156859336|gb|EDO52767.1| hypothetical protein BACUNI_03562 [Bacteroides uniformis ATCC 8492] Length = 1068 Score = 37.8 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 68/256 (26%), Gaps = 10/256 (3%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQN----QMGELPNYSISRGAVLAATRV 59 IL R K +L L LV + L+E + +++ ++A V Sbjct: 412 ILHRRNLKAFLSVLAATLTTMGALVIIFFLDERIRLNLQDFAAVVIINLAVSLMVALFFV 471 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P +I++I + + R +++ + ++ F V + Sbjct: 472 PSMIEKI------GLVRRITGKKRRLVLPGLTQTFKTRLGRIFRRFPVYFSCCYSALIRF 525 Query: 120 INPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDF 179 + + + + + W N + + P Sbjct: 526 LCRWRWAVCLLLLLGFGLPVFLLPDKLEGGGKWEAAYNKVFGSDTYKESVKPVVDKALGG 585 Query: 180 TSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQK 239 + +K + ++ L + + + T L+ ++ F Sbjct: 586 SLRLFIQKVYEGSYFTRNEEVVLYANANLPNGSTLEQMNTLMKRMETYLSRFKEIRQFHT 645 Query: 240 FSEQFASRSFYEIIKK 255 S KK Sbjct: 646 SIYSPRRASMQIYFKK 661 >gi|321258526|ref|XP_003193984.1| alpha-1,2-mannosyltransferase; Alg11p [Cryptococcus gattii WM276] gi|317460454|gb|ADV22197.1| Alpha-1,2-mannosyltransferase, putative; Alg11p [Cryptococcus gattii WM276] Length = 902 Score = 37.8 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 30/351 (8%), Positives = 82/351 (23%), Gaps = 16/351 (4%) Query: 9 FFKYYLKTTLYFLLGAMILVFVIDLNEIQN---QMGELPNYSISRGAVLAATRVPLIIQQ 65 Y+L L F L LV I L+++ N + + Sbjct: 12 LLSYFLLIFLSFGLVFRSLVAGIQLDKLFNGRPFFFLRSSIGALLCTWYFMIQFMNWSYH 71 Query: 66 IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIAT 125 +I + E S + + I I + Sbjct: 72 DFAAYNPSSSIGEWLVNTALFEQAWSIVCKGPGNWWWSSW----ICTWTVAFTAIVWFES 127 Query: 126 SGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITID 185 I ++ + + I + + I Sbjct: 128 GRRGIRYPYAYMLLGQLVAMSVATGLFLVAISLYPRTHSSPRTIPFYIAVPLVMAFVPIH 187 Query: 186 KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFA 245 + +++ + + ++ F S Sbjct: 188 FLPHDMGTDRFIKMLLWLHGALFLVLTSPSASSEEDVASHKGVSPSFLHTVFVTLSSIIH 247 Query: 246 SRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR 305 + + + + + + ++ ++++ + L ++ Sbjct: 248 IPATLRLFASIPTGQSLTSYLFTTLFSHPAQASISLDVIWVFLILSSWLILSGPFRSRFF 307 Query: 306 IIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILL 356 + GF L + ++G + A+++P++L +S+ L Sbjct: 308 KSALF--LFGFALVLVNYTGINWG-------LVASIVPMLLLLSVGACALY 349 >gi|223982618|ref|ZP_03632852.1| hypothetical protein HOLDEFILI_00126 [Holdemania filiformis DSM 12042] gi|223965398|gb|EEF69676.1| hypothetical protein HOLDEFILI_00126 [Holdemania filiformis DSM 12042] Length = 692 Score = 37.8 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 52/161 (32%), Gaps = 6/161 (3%) Query: 204 DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKS- 262 D + L ++ + + L+ F E S + + ++ S Sbjct: 93 DAMWLGDFLQTMPSEMIPEDLRGMLDNGDCQLMMVTFEEGNGSDRTLKAVDEIKSLMNSQ 152 Query: 263 ---NIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLY 319 +T+ +PL + ++ V R + I GI + Sbjct: 153 MFLGGLAAVINDTKMLIEQELPLYVAVAVGLSLVVLFLGLRYSVAPFIFLLGILYAVLYN 212 Query: 320 TIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQKED 360 I G+ + AA++ + +++ SI +L + ++ Sbjct: 213 FGTNIF--LGEVSYITSALAAILQLAVSMDFSIFLLERYDE 251 >gi|163841746|ref|YP_001626151.1| glycosyltransferase [Renibacterium salmoninarum ATCC 33209] gi|162955222|gb|ABY24737.1| glycosyltransferase [Renibacterium salmoninarum ATCC 33209] Length = 1134 Score = 37.4 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 8/87 (9%) Query: 273 QFYFLIVIPLMLVAMTLIAASVSL--------EFSRSNQPRIIVAYGIFSGFMLYTIITI 324 + IP +A+ +I A + L RS R++ GIF+ + Y + I Sbjct: 664 MSWLPAGIPWAWLAVLIIGAPLVLLAVGALVWPNKRSATVRVLWLVGIFALVLGYLVGHI 723 Query: 325 MKSFGKSGILLPVAAALIPVILTISLS 351 S GK ++ P + + V+ L Sbjct: 724 GTSTGKDALVTPFSGPALSVLAFALLG 750 >gi|320200608|gb|EFW75194.1| hypothetical protein ECoL_02174 [Escherichia coli EC4100B] Length = 56 Score = 37.4 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%) Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQK 358 + V GI GF+ Y + I + P+ AL+P +S+ +L++K Sbjct: 1 MGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRK 55 >gi|257052666|ref|YP_003130499.1| PAS/PAC sensor signal transduction histidine kinase [Halorhabdus utahensis DSM 12940] gi|256691429|gb|ACV11766.1| PAS/PAC sensor signal transduction histidine kinase [Halorhabdus utahensis DSM 12940] Length = 666 Score = 37.4 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 7/68 (10%) Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFG-------KSGIL 334 VAM L+ A+V + + + G F++ TI ++ G G Sbjct: 155 FYYVAMGLLGANVLFGSGKRRRQSAALFVGFLPAFVITTIWSMGVLLGPINGALVIGGTW 214 Query: 335 LPVAAALI 342 A Sbjct: 215 SLAVIAWA 222 >gi|242065148|ref|XP_002453863.1| hypothetical protein SORBIDRAFT_04g019800 [Sorghum bicolor] gi|241933694|gb|EES06839.1| hypothetical protein SORBIDRAFT_04g019800 [Sorghum bicolor] Length = 798 Score = 37.4 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 4/105 (3%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + K + + A + + P L AM ++ + + R+ + Sbjct: 647 SLWRQFKAETEYTVTQAIAAQEANKRNNNWLPPPWALAAMAILGFNEFMTLLRNPLYLAV 706 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA---LIPVILTIS 349 + G ++ + I F ++G L + + +P I+ I Sbjct: 707 IFVIFLVGKAIWVQLDIASEF-QNGFLPAILSLSTKFVPTIMNIL 750 >gi|239948137|ref|ZP_04699890.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] gi|239922413|gb|EER22437.1| putative permease [Rickettsia endosymbiont of Ixodes scapularis] Length = 233 Score = 37.4 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 21/193 (10%), Positives = 66/193 (34%), Gaps = 3/193 (1%) Query: 166 AKKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNS 225 ++ ++ D S+ + ++ + + + V + +S Sbjct: 42 MNGVIIFDNRNADNPSVVFAGSGTLNIYDNSPIFELNKGIRQEYDV---NGNLTQLTFDS 98 Query: 226 TTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLV 285 + + + ++ + Y I + ++ + I + + + I+ PL Sbjct: 99 LMIKLQNDNPLVSQRTKHNKEANEYYISELLAPPHDLAITKKIKLIAEAHQRIIWPLYNF 158 Query: 286 AMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + +A +V L + S + + +L T I + S L + A ++ Sbjct: 159 VLPFLALAVFLRYPYSKKTTFMPVLFSALTVLLVTSIHFILQNFASKNLDFIFACYSNLV 218 Query: 346 LTISLSILILLQK 358 + + + + + ++K Sbjct: 219 IALMIGLYLFVRK 231 >gi|163785437|ref|ZP_02180046.1| hypothetical protein HG1285_10847 [Hydrogenivirga sp. 128-5-R1-1] gi|159879293|gb|EDP73188.1| hypothetical protein HG1285_10847 [Hydrogenivirga sp. 128-5-R1-1] Length = 313 Score = 37.4 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 95/331 (28%), Gaps = 18/331 (5%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPL 61 + ++Y K + L FL +L+ + + + + + I + Sbjct: 1 MKLFYKYLAKKFFYYFLTFLGIISLLIISSQMLNLPSIL---YHLDIFKFFQSILLINIS 57 Query: 62 IIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVIN 121 ++ F + + + + L E+ + GIS L + +I+ + + + Sbjct: 58 FLKLQFLFAYALSFLFLGYYLRENREIYAIYSAGISKNNFLKFIIGLNIIAVVVGLFISL 117 Query: 122 PIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTS 181 + + I I + + + K +N + + + Sbjct: 118 YVVPKANRERIKFITVNVKKYFLEALQPKNFTTLPGDYIVYVSDKDKEKMKNVVIYNQKN 177 Query: 182 ITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFS 241 + K + + ++P L + Sbjct: 178 GFLITAKKAFFKGTNLILYEG-------------MLQVPSKHGFNALIYKRYIFDLNIEY 224 Query: 242 EQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRS 301 E+ S + + ++ + SN +A I L + + + + L S+ Sbjct: 225 EKKYSIEDFRLKDLLTIAVSSNNSEKLKAIAVLSERIAYVLPFLFIPTMFFFIGLNISKD 284 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSG 332 + VA GI + +I + + G Sbjct: 285 RDFILSVALGIL--VIYISINYYLIKLIEKG 313 >gi|116192583|ref|XP_001222104.1| hypothetical protein CHGG_06009 [Chaetomium globosum CBS 148.51] gi|88181922|gb|EAQ89390.1| hypothetical protein CHGG_06009 [Chaetomium globosum CBS 148.51] Length = 1873 Score = 37.4 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 58/236 (24%), Gaps = 21/236 (8%) Query: 141 NGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDADLAI 200 + I S K E + E+ + I + Sbjct: 1598 DELLPWMRYIFVQTPSYTHIMPLHHQKSHAREIKVSENPGLHLVWYYELIFIKPIPAYFY 1657 Query: 201 IYNDKVKLKKVV------EYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYE-II 253 V L+ + R ++ + ++ YE Sbjct: 1658 SQAFWVYLENANKELYGACLGFIRSYYMLIQYEIDFHEACELRLIPAKGNGELPTYEEWC 1717 Query: 254 KKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIF 313 + + + H R + + + + + + I Sbjct: 1718 EFIEPFARVGDAHVNRRYHYGELRLTRINRAAMLFKFSLAYFHIYPQWGSFLEHTLAPII 1777 Query: 314 SGFML--YTIITI----------MKSFGKSGILLPVA--AALIPVILTISLSILIL 355 + F + + ++ + F +G + PVI+ +S++++++ Sbjct: 1778 TVFAVCSVVLNSMQVSLAVMEVKGEDFAITGAWNSFMDASLWFPVIVNLSIAVILI 1833 >gi|332367302|gb|EGJ45037.1| hypothetical protein HMPREF9396_0181 [Streptococcus sanguinis SK1059] Length = 689 Score = 37.0 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 71/247 (28%), Gaps = 5/247 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K Y+K+ L+ L +L ++ E N S T+ + Sbjct: 3 IIMKYLMKKYVKSFLFGLTFIFVLFSS--AVYAVTELTESTNLSTLDIYQFTLTQ--DNM 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + + ++ + + + S + R Q N + + Sbjct: 59 EVLSQGASVERDFIPANGNWKESTVFSLRVDKNQTQQTFNSPIQLRFNNAGIVNGKAVDV 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + I L+Q+ D D K + N I P + + Sbjct: 119 YVTFHSIDTHLVQRNADYQDPNKMLVPFLTVDENWGSKSIQIMDYIWPPHPTLTHDMHGS 178 Query: 184 IDKKNKIIHRKDADLAIIYN-DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + V L ++ Y + ++N + + I ++ K + Sbjct: 179 FALDTDVTAELRYQDGTPTDLKMVMLPSDIDVVYNALGREENFSIYDKDIALNKIVKNTS 238 Query: 243 QFASRSF 249 + + Sbjct: 239 YALNETL 245 >gi|322489317|emb|CBZ24576.1| putative ATP-binding cassette protein subfamily A, member 4 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 2062 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 42/158 (26%), Gaps = 12/158 (7%) Query: 4 ILWR--YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYS-ISRGAVLAATRVP 60 IL R Y K + L + +I L+ + S I + A P Sbjct: 518 ILLRAAYLAKSNFGIVFFLLFVFSL--SIITLSGLMAVFFNRARLSAILAPLIYFALAAP 575 Query: 61 LIIQQ------IIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGI 114 L Q +I L + + S +S + S ++ I Sbjct: 576 LFTVQNLQGPALIGLSFLSPSGLAVGVTILFS-HELSGGMAGSDLTYFRDSPKMLTVMII 634 Query: 115 FTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPW 152 V + +A + Q + + W Sbjct: 635 LFVDFLIYLALMLYLDAVMPKQWGTRKHPLFFIEPVRW 672 >gi|150864187|ref|XP_001382911.2| hypothetical protein PICST_66867 [Scheffersomyces stipitis CBS 6054] gi|149385443|gb|ABN64882.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 463 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 1/112 (0%) Query: 234 MDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAAS 293 +D S+++ S ++I R + P + + L+ Sbjct: 209 IDDLLWESKRYPSSQPWKIYGSSKLLLGMFAKEYQRRLMAYERNDKAPC-NIRINLVNPG 267 Query: 294 VSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVI 345 + S + G+ ++Y I + +SG A P+ Sbjct: 268 IMRTASTRRFLSMGTVLGLLLYLIMYPIWYLFLKSARSGAQNVFFALFAPIF 319 >gi|118372357|ref|XP_001019375.1| hypothetical protein TTHERM_00389700 [Tetrahymena thermophila] gi|89301142|gb|EAR99130.1| hypothetical protein TTHERM_00389700 [Tetrahymena thermophila SB210] Length = 1778 Score = 37.0 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 32/296 (10%), Positives = 82/296 (27%), Gaps = 16/296 (5%) Query: 12 YYLKTTLYFLLGAMILVFVIDLN-----EIQNQMGELPNYSISRGAVLAATRVPLIIQQI 66 + + L +L + I L + + +Y +L +PL + + Sbjct: 1167 NFTGSFLSNMLIFFCIQGFIWLFCYCLNKYIIKYELDHHYFTYHLNMLITYNLPLALFLL 1226 Query: 67 IPFITLVVNIVVFFNLNRTS----------ELVISRAIGISIWQLLNPFVVGSILLGIFT 116 F ++ + + +S E+ +S + F Sbjct: 1227 SYFEIIISIFLQLKQGDYSSLFNTSLLGLLEVEQYSLEKLSPNYHNLENNNSCYISFYFA 1286 Query: 117 VLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIW 176 VL I S + L Q+ ++ ++ + + + I K I Sbjct: 1287 VLQIENAIFSWKYSMNFLYVQYGLFQFQKHTNFLFILFEFVVNIPLLIQRYKWARNILIE 1346 Query: 177 EDFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDG 236 + + + I R++ L ++ DK + + D+++ + Sbjct: 1347 QTSHFLEWLNRKNIQKRQNFLLNMLSIDKKDEHVINMSENKTNQSDQSNYYFKNQKDIIH 1406 Query: 237 FQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAA 292 + + + + + N + + L+ M L+ Sbjct: 1407 LLTGHDLKQVKQSNQELDIID-LEIDEEEVNLIKQRSKLSSNNLNLLPQDMNLVGL 1461 >gi|329767544|ref|ZP_08259067.1| hypothetical protein HMPREF0428_00764 [Gemella haemolysans M341] gi|328835878|gb|EGF85600.1| hypothetical protein HMPREF0428_00764 [Gemella haemolysans M341] Length = 727 Score = 37.0 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 4/51 (7%), Positives = 14/51 (27%), Gaps = 5/51 (9%) Query: 2 PGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGA 52 L++Y L +V ++ + ++ ++ Sbjct: 1 MKTLFKYIS----SIFFSICLVLFFVVMIL-FARELRDVPDITQANLQDPL 46 >gi|325687336|gb|EGD29358.1| hypothetical protein HMPREF9381_1485 [Streptococcus sanguinis SK72] Length = 689 Score = 37.0 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 5/247 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K Y+K+ L+ L +L ++ E N S T+ + Sbjct: 3 IIMKYLMKKYVKSFLFGLTFIFVLFSS--AVYAVTELTESTNLSTLDIYQFTLTQ--DNM 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + + ++ + + + S + R Q N + + Sbjct: 59 EVLSQGASVERDFIPANGNWKESTVFSLRVDKNQTQQTFNSPIQLRFNNAGIVNGKAVDV 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + I L+Q+ D D K+ + N I P + + Sbjct: 119 YVTFHSIDTYLVQRNTDYQDPNKTLVPFLTVDENWGSKSIQIMDYIWPPHPTLTHDMHGS 178 Query: 184 IDKKNKIIHRKDADLAIIYN-DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + V L ++ Y + ++N + + I ++ K + Sbjct: 179 FALDTNVTAELRYQDGTPTDLKMVMLPSDIDVVYNALGREENFSIYDKDIALNKIVKNTS 238 Query: 243 QFASRSF 249 + + Sbjct: 239 YALNETL 245 >gi|189520009|ref|XP_696586.3| PREDICTED: solute carrier family 44, member 2 [Danio rerio] Length = 845 Score = 37.0 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 34/357 (9%), Positives = 85/357 (23%), Gaps = 17/357 (4%) Query: 8 YF-FKYYLKTTLYFLLGAMILVFVIDLN---EIQNQMGELPNYSISRGAVLAATRVPLII 63 Y + + L ++ ++ + + + + S + G V+++ PL+ Sbjct: 308 YLQIQQTWLAFMIILCIVEAVILLLLIFLRKRLLIAIALIKEASKAIGHVMSSLFYPLLT 367 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 ++ + I F + + T V Sbjct: 368 YALMSLVIAYWAITAVFLSTSNEPIYKVFNTSNCSYSRATCN-----PATFNTSNVTTEC 422 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + + ++ I +G + + Sbjct: 423 PDAECLFAFYGGETLYHKWLIVFQFYNLFLFFWCVNFVIALGQVTLAGAFASYYWAFKKP 482 Query: 184 IDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQ 243 D I + + ++ I + + + F KF Sbjct: 483 DDMPAFPIFNSLGRALRYHTGTLAFGSLILAIVQVIRVVLEYLDQKLKGAQNKFAKFLLS 542 Query: 244 FASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQ 303 F+ + K + F N++ Y A L+ ++ Sbjct: 543 CLKCCFWCLEKFIKFINRNAYIMVAI-----YGKNFCTSARDAFFLLMRNIVRVAVLDKV 597 Query: 304 PRIIVAYGIFSGFMLYTIITIMKSFGK---SGILLPVAAALIPVILTISLSILILLQ 357 ++ G + I + GK + + P ILT+ ++ Sbjct: 598 TDFLLFLGKLLIVGIVGICSFFFFTGKIKIAQDVTPALNYYWVPILTVVFGAYLIAH 654 >gi|156101579|ref|XP_001616483.1| tryptophan-rich antigen (Pv-fam-a) [Plasmodium vivax SaI-1] gi|148805357|gb|EDL46756.1| tryptophan-rich antigen (Pv-fam-a) [Plasmodium vivax] Length = 588 Score = 37.0 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 26/292 (8%), Positives = 71/292 (24%), Gaps = 33/292 (11%) Query: 11 KYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFI 70 K +L L L A+ + + + + E S+ T + P Sbjct: 293 KGFLGFFLSLLSIALFTIMCANFLKQLSVSIERQQESVYAKQDPFLTNKGENFYEPTPDS 352 Query: 71 TLVVNIVVFFNLNRTSELVISRAIGISIW----------QLLNPFVVGSILLGIFTVLVI 120 T + +E + + S W + V+ Sbjct: 353 T---------ERWKENEWYMWKKKLNSSWEEFNSSVENGKRKWLVNKDKDWEDWLKVMEK 403 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQ------------ISNPQQDIFIGAKK 168 + + ++ + D W++ + + Sbjct: 404 KWMHYNERMEREYKSDLFERSADWDDQQWEEWIRTEGEQFMELDWKKWMYENKFLLDDWA 463 Query: 169 ILPENHIWEDFTSITIDKKNKIIHRKDADLAII--YNDKVKLKKVVEYQYGRIPIDKNST 226 +D + K+ +K D + V L+ + + I++ Sbjct: 464 SKEWAKWKKDKIMSWLLSDWKLTEQKYWDDWENKAWPRFVYLRDRENWMRWKERINREWE 523 Query: 227 TLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLI 278 ++ + ++ S + ++ F + F + + + Sbjct: 524 EWTSWVQDKDKVFVNNKWVGWSKWRDDRRALFDDWMKPFIEKWINQKQWKVW 575 >gi|125718440|ref|YP_001035573.1| hypothetical protein SSA_1635 [Streptococcus sanguinis SK36] gi|125498357|gb|ABN45023.1| Hypothetical protein SSA_1635 [Streptococcus sanguinis SK36] Length = 689 Score = 37.0 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 5/247 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K Y+K+ L+ L +L ++ E N S T+ + Sbjct: 3 IIMKYLMKKYVKSFLFGLTFIFVLFSS--AVYAVTELTESTNLSTLDIYQFTLTQ--DNM 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + + ++ + + + S + R Q N + + Sbjct: 59 EVLSQGASVERDFIPANGNWKESTVFSLRVDKNQTQQTFNSPIQLRFNNAGIVNGKAVDV 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + I L+Q+ D D K+ + N I P + + Sbjct: 119 YVTFHSIDTYLVQRNTDYQDPNKTLVPFLTVDENWGSKSIQIMDYIWPPHPTLTHDMHGS 178 Query: 184 IDKKNKIIHRKDADLAIIYN-DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + V L ++ Y + ++N + + I ++ K + Sbjct: 179 FALDTNVTAELRYQDGTPTDLKMVMLPSDIDVVYNALGREENFSIYDKDIALNKIVKNTS 238 Query: 243 QFASRSF 249 + + Sbjct: 239 YALNETL 245 >gi|224134563|ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|222835989|gb|EEE74410.1| predicted protein [Populus trichocarpa] Length = 716 Score = 37.0 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 38/105 (36%), Gaps = 4/105 (3%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + K + + A + + P ++A+ ++ + + R+ + Sbjct: 556 SLWRQFKTETEYTVTQAISAQEAHKRNNNWLPPPWAILALVVLGFNEFMTLLRNPLYLGV 615 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA---LIPVILTIS 349 + G L+ + I F ++G L + + +P I+ + Sbjct: 616 IFVGFLLIKALWVQLDISGEF-RNGALPGLLSLSSKFVPTIMNLL 659 >gi|324991425|gb|EGC23358.1| hypothetical protein HMPREF9388_0267 [Streptococcus sanguinis SK353] Length = 689 Score = 37.0 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 5/247 (2%) Query: 4 ILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLII 63 I+ +Y K Y+K+ L+ L +L ++ E N S + T+ + Sbjct: 3 IIMKYLMKKYVKSFLFGLTFIFVLFSS--AVYAVTELTESTNLSTLDIYQFSLTQ--DNM 58 Query: 64 QQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPI 123 + + ++ + + + S + R Q N + + Sbjct: 59 EVLSQGASVERDFIPANGNWKESTVFSLRVDKNQTQQTFNSPIQLRFNNAGIVNGKAVDV 118 Query: 124 ATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSIT 183 + I L+Q+ D D K+ + N I P + + Sbjct: 119 YVTFHSIDTHLVQRNADYQDPNKTLVPFLTVDENWGSKSIQIMDYIWPPHPTLTHDMHGS 178 Query: 184 IDKKNKIIHRKDADLAIIYN-DKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSE 242 + + V L ++ Y + ++N + N ++ K + Sbjct: 179 FALDTDVTAELRYQDGTPTDLKMVMLPSDIDVVYNALGREENFSIYNKDTALNKIVKNTS 238 Query: 243 QFASRSF 249 + + Sbjct: 239 YALNETL 245 >gi|329770142|ref|ZP_08261534.1| hypothetical protein HMPREF0433_01298 [Gemella sanguinis M325] gi|328837158|gb|EGF86798.1| hypothetical protein HMPREF0433_01298 [Gemella sanguinis M325] Length = 447 Score = 36.6 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 21/46 (45%) Query: 282 LMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKS 327 + + + ++A + F+R + A+GI +++ ++ I Sbjct: 95 IFYIILFILAIPTTASFARRLRDVGFAAWGIVLAVVIFYLLNIFSI 140 >gi|323481015|gb|ADX80454.1| permease family protein [Enterococcus faecalis 62] Length = 389 Score = 36.6 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 7/129 (5%) Query: 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYS-------ISRGAVLAATRV 59 +Y K + + + + L+ ++ L E ++G + + L + Sbjct: 248 KYIIKVMTYSIMLVGMVVLSLILILWLRERIYEIGIFLSIGTSKIQIIMQFIFELIFISI 307 Query: 60 PLIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLV 119 P +I + L+ IV F + S + I S + + S L+ I +++ Sbjct: 308 PSVISSLFLGNVLLKVIVDGFINSEDSMISGGSLINNSSFMSNITTLGQSYLILISIIVL 367 Query: 120 INPIATSGE 128 A+S Sbjct: 368 SVVFASSLM 376 >gi|85858076|ref|YP_460278.1| HD domain-containing protein [Syntrophus aciditrophicus SB] gi|85721167|gb|ABC76110.1| HD domain protein [Syntrophus aciditrophicus SB] Length = 660 Score = 36.6 bits (82), Expect = 5.9, Method: Composition-based stats. Identities = 31/321 (9%), Positives = 84/321 (26%), Gaps = 17/321 (5%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M L YF Y+ ++ LL + +V + ++ + Sbjct: 1 MMDRLKNYFMTYFEQSF--VLLVLISIVLIFYFL--------PNKLAMLNFFYIPILGAA 50 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 I + + + + + + L V+ L + V+V Sbjct: 51 YYINHRGAMLGSIFCVFTVILFAWL--YPSNFFVEQTPMNLGLHIVIWGGFLILTGVIVG 108 Query: 121 NPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFT 180 +I + + + K+ + + + + ++ E Sbjct: 109 TLRQNLLNEISQGVTLKTELKVSKKNLEKVSRDLQEHTEHMEDKIKERTHHLEKSKEAVE 168 Query: 181 SITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKF 240 + ++ + D + + +K + + +T + Sbjct: 169 EMKERVEDALYSTMDPAVVKLLIEKRLRTEKRNISVLFSDLKSFTTFSEASQPEIVVTQL 228 Query: 241 SEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSR 300 + FA + K ++ M ++AA + R Sbjct: 229 NRLFAEMETILLEYKAHIDKYMGDGIMAEFGAPTHYDR-----HALMAVMAAMKMQNWVR 283 Query: 301 SNQPRIIVAYGIFSGFMLYTI 321 S+ + + GI +G + + Sbjct: 284 SSDFPLKMRIGIATGEAIVGL 304 >gi|320536713|ref|ZP_08036722.1| magnesium-translocating P-type ATPase [Treponema phagedenis F0421] gi|320146416|gb|EFW38023.1| magnesium-translocating P-type ATPase [Treponema phagedenis F0421] Length = 877 Score = 36.2 bits (81), Expect = 7.1, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 2/54 (3%) Query: 5 LWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATR 58 L + K +L L+ ++ F+ + +GE S L Sbjct: 53 LLKLIIKSFLTPFTLVLIVLSVISFITEYV--LAPVGEKDALSALIILFLVILS 104 >gi|308509510|ref|XP_003116938.1| hypothetical protein CRE_32636 [Caenorhabditis remanei] gi|308241852|gb|EFO85804.1| hypothetical protein CRE_32636 [Caenorhabditis remanei] Length = 413 Score = 36.2 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 67/230 (29%), Gaps = 8/230 (3%) Query: 6 WRYFFKYYLKTTLYFLLGAM---ILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLI 62 R K YLKT L L + I+ + + + + P + Sbjct: 11 DRNILKRYLKTALIVLSILVICGIVALGLSNVTLLKTLPSAASCGKRIVGYYTEWEAPEV 70 Query: 63 ----IQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIW-QLLNPFVVGSILLGIFTV 117 ++++ I L I + E SR + + + LN + I +G + V Sbjct: 71 TENQLRKLTHVIFLFAAIYEDGSARFWDEHGESRFLTLKEMAKKLNTGLKVMIGVGGYMV 130 Query: 118 LVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWE 177 S K+ LI D+ D + I Q K I Sbjct: 131 SPRFGPIVSDSKLRKKLISDIASIIDEHDLDGVEIFWIFPGQTHKKYYLKLIRELREKLS 190 Query: 178 DFTSITIDKKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT 227 I + I+ + + LK+++EY + + Sbjct: 191 QMEQIKNRAEAYILSIVAPKFKVQLKNGYDLKRLLEYADFIDVLTYDYFN 240 >gi|123493710|ref|XP_001326354.1| hypothetical protein [Trichomonas vaginalis G3] gi|121909267|gb|EAY14131.1| hypothetical protein TVAG_351790 [Trichomonas vaginalis G3] Length = 991 Score = 36.2 bits (81), Expect = 8.0, Method: Composition-based stats. Identities = 27/245 (11%), Positives = 64/245 (26%), Gaps = 15/245 (6%) Query: 127 GEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDK 186 K +I + + W + I I + I S T K Sbjct: 731 WSKFVQPMIPKRITPKPDPIAYNKTWKSEKINETQYKINLNDIPSHDQIVYIGNSDTFSK 790 Query: 187 KNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNSTT---------LNIPIKMDGF 237 + KL E D+++ + ++ Sbjct: 791 VRIFFSAVKLTKCPKGYNCNKLTNATEAHSWLCFSDESNENVCFEAGDARYGLEYAINDP 850 Query: 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTL-----IAA 292 S+ F + ++ + E ++ + + + L + Sbjct: 851 SDASKGFHVEYDGGLGNYETWLHFWCNTSVPAGEMYWHPVSKMFGSSYKIILETESRLGC 910 Query: 293 SVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILL-PVAAALIPVILTISLS 351 + +F + + +F G LY + + +F G + P AA ++ + Sbjct: 911 PIGTKFPGTTTGGAVFLLIVFLGVFLYVFVMVAYNFFAKGEVAFPNAAFWAEFFNCVTAA 970 Query: 352 ILILL 356 + + Sbjct: 971 CVFIF 975 >gi|298206906|ref|YP_003715085.1| RND family efflux transporter [Croceibacter atlanticus HTCC2559] gi|83849540|gb|EAP87408.1| RND family efflux transporter [Croceibacter atlanticus HTCC2559] Length = 1071 Score = 36.2 bits (81), Expect = 8.2, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 49/152 (32%), Gaps = 12/152 (7%) Query: 215 QYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQF 274 + + N + I ++ + + ++ E + F Sbjct: 280 KVRAYTEEFNEKYTALQIIIEDDRSITLNQRTQLLIENGAVGILLVLFFLSLFLNTRLAF 339 Query: 275 YFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSF------ 328 + +P+ + M + A S + + + +I+ GI + I + + Sbjct: 340 WVAFGLPIAFLGMFMFAGSFGVTINVLSLFGMIIVIGILVDDGIVISENIYQHYEMGKKP 399 Query: 329 ------GKSGILLPVAAALIPVILTISLSILI 354 G +L P+ +A+I IL S + + Sbjct: 400 VQAAIDGTLEVLPPILSAIITTILAFSTFLFL 431 >gi|297526499|ref|YP_003668523.1| hypothetical protein Shell_0493 [Staphylothermus hellenicus DSM 12710] gi|297255415|gb|ADI31624.1| hypothetical protein Shell_0493 [Staphylothermus hellenicus DSM 12710] Length = 705 Score = 36.2 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 309 AYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 I G +L + G G++ +AA LI +++ + I+L Sbjct: 56 LTSIIVGIILLVFSIFLLILGGVGVID-LAAGLIGIVVLACIGAFIILY 103 >gi|118346014|ref|XP_976836.1| hypothetical protein TTHERM_00702230 [Tetrahymena thermophila] gi|89288253|gb|EAR86241.1| hypothetical protein TTHERM_00702230 [Tetrahymena thermophila SB210] Length = 1472 Score = 36.2 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 31/344 (9%), Positives = 90/344 (26%), Gaps = 5/344 (1%) Query: 18 LYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIV 77 ++ + + + +I + + A ++ I + ++ + Sbjct: 830 IFAICLFFGFLIAFRIIQILLKKILAKCEKFNSFMYKCAMKLQYNISIEVVYVVFLNFCA 889 Query: 78 VFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQ 137 F + + + S + + L KI ++ Sbjct: 890 SSFLQFQDTTVSDSTEKEHTAELVNIIVFSICFLGLFAVPTSQLIFLYRNRKIIEFDLEN 949 Query: 138 WKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKKNKIIHRKDAD 197 ++ + + P ++ + ++ ++ +K+ + Sbjct: 950 YESQIETSINLESPQVKRPSSHTLQEKQKERRNMIIKNLKNCDETCKEKQQRNNDECQNP 1009 Query: 198 LAIIYNDKVKLKK-VVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKM 256 KL+ + + Q I K ++ ++ + +F + Sbjct: 1010 NENKIKQTSKLQNEMSDNQLDDEQIKKLKLAQEHIEFLEKWEAIIVGMKTSNFKFYCFNV 1069 Query: 257 SFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVS--LEFSRSNQPRIIVAYGIFS 314 + I Y I + L++ +A ++ + F + Q I + I Sbjct: 1070 ITYYRKMIIMAIIMCLMDYTEIQVQLLVFQHICVAVYITKYMPFEKFAQNIINILSEILF 1129 Query: 315 GFMLYTIITIMKSFGKSGILLP--VAAALIPVILTISLSILILL 356 + +I + I + I ILL Sbjct: 1130 ILLELFVIRLSSQAVDQADQDERNHIGLWIICFFLSIIGIHILL 1173 >gi|226940221|ref|YP_002795295.1| magnesium-transporting ATPase MgtA [Laribacter hongkongensis HLHK9] gi|226715148|gb|ACO74286.1| Magnesium-translocating P-type ATPase [Laribacter hongkongensis HLHK9] Length = 921 Score = 36.2 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 43/153 (28%), Gaps = 3/153 (1%) Query: 208 LKKVVEYQYGRIPIDKNSTTLNIPIKMDGFQKFSEQFASRSFYEIIKKMSFSNKSNIFHN 267 L V + +D + + +F F S I + + Sbjct: 759 LYDVSQIAIPFDNVDSELLMKPQQWRPEDIGRFMVFFGPISSVFDITTYALMWFVFGANT 818 Query: 268 YRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPR---IIVAYGIFSGFMLYTIITI 324 + F + +L ++ + ++V I ++ + Sbjct: 819 PEHQALFQSGWFVVGLLTQTLIVHMIRTPRIPFVQSRAAPPLVVMTVIIMAIGIFLPMGP 878 Query: 325 MKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 + K L P+ +P IL + + L++ Sbjct: 879 FAHYFKLETLPPLYFVFLPFILIGYMGLTQLMK 911 >gi|156102633|ref|XP_001617009.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148805883|gb|EDL47282.1| hypothetical protein, conserved [Plasmodium vivax] Length = 713 Score = 36.2 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 19/229 (8%), Positives = 61/229 (26%), Gaps = 8/229 (3%) Query: 1 MPGILWRYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVP 60 M I +KY + + LL I+VF + + I + + ++ +L Sbjct: 481 MNKI-----YKYAIYSFFGELLVISIIVFSLFILRIIIKDNNKFSVILTMYGILYKIFCY 535 Query: 61 LIIQQIIPFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVI 120 + ++ +++I +N+ + ++ Sbjct: 536 IFAHYVLVMGLYILSIYYNIYVNKDIYEHSFNFFCYHYVYNNLHIHFLMLFYAFQNIIFT 595 Query: 121 NPIATSGEKIGIDLIQQWKDN--GDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWED 178 A + ++ + + + I + ++ + + + + + Sbjct: 596 INDAFNCIRMMFIIFKHIMVRIYEKITCKNFITFYELKEDKSPLSLNCMNKFKKKCNMNN 655 Query: 179 FTSITID-KKNKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPIDKNST 226 + I + + L + + I + S Sbjct: 656 KCCRDKTCVEIDIDEIHELEYDKSQLPFPSLHQKPYCKNLDIKTYEQSL 704 >gi|297626291|ref|YP_003688054.1| hypothetical protein PFREUD_10970 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922056|emb|CBL56620.1| Hypothetical protein PFREUD_10970 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 544 Score = 35.8 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 9/78 (11%) Query: 279 VIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVA 338 P L T++ ++ S + R + G+ +G LY++ ++ V Sbjct: 52 FQPFGLWPTTVVGIALLSWLSDQARARRVAWCGLLAGLALYSMTVSFQA---------VV 102 Query: 339 AALIPVILTISLSILILL 356 A +PV++ L+ +LL Sbjct: 103 AWWLPVLMVPVLACWVLL 120 >gi|271967714|ref|YP_003341910.1| hypothetical protein Sros_6453 [Streptosporangium roseum DSM 43021] gi|270510889|gb|ACZ89167.1| hypothetical protein Sros_6453 [Streptosporangium roseum DSM 43021] Length = 496 Score = 35.8 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 7/69 (10%) Query: 288 TLIAASVSLEFSRSNQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPVILT 347 LI + F R + + + + L + ++ ++ G V A ++ Sbjct: 384 ALIWPPIRRRFRRMAWTGLGLLVSVLAFITLLVLFSVNQA----GAWPAVLAGW---LVI 436 Query: 348 ISLSILILL 356 L++L+LL Sbjct: 437 RILAVLMLL 445 >gi|195379302|ref|XP_002048419.1| GJ11362 [Drosophila virilis] gi|194155577|gb|EDW70761.1| GJ11362 [Drosophila virilis] Length = 903 Score = 35.8 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 7/118 (5%) Query: 247 RSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIA-----ASVSLEFSRS 301 R F+ + F + L IP++ + LI ++ +R+ Sbjct: 47 RDFFIEYYYICFVAFILAVLLFGIFIFVEKLRYIPVLNFIICLIIVELQIIALFALVART 106 Query: 302 NQPRIIVAYGIFSGFMLYTIITIMKSFGKSGILLPVAAALIPV-ILTISLSILILLQK 358 +I+ + + +L+ I I + L A L V L ++++I L+ + Sbjct: 107 YWMDLIIFF-VICFVLLWLFILIGSVLPRKLDLTLDVAILFIVGFLFLAIAIYFLMYR 163 >gi|297834224|ref|XP_002884994.1| hypothetical protein ARALYDRAFT_478791 [Arabidopsis lyrata subsp. lyrata] gi|297330834|gb|EFH61253.1| hypothetical protein ARALYDRAFT_478791 [Arabidopsis lyrata subsp. lyrata] Length = 803 Score = 35.8 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 39/105 (37%), Gaps = 4/105 (3%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + K + + A + + P ++A+ ++ + + R+ ++ Sbjct: 647 SLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAILALVVLGFNEFMTLLRNPLWLLV 706 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA---LIPVILTIS 349 + G L+ + I F ++G L + + IP ++ + Sbjct: 707 LFVGYLISKALWVQLNISGEF-RNGALPGLLSLSTKFIPTVMNLL 750 >gi|110740460|dbj|BAF02124.1| root hair defective 3 [Arabidopsis thaliana] Length = 585 Score = 35.8 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + K + + A + + P ++A+ ++ + + R+ ++ Sbjct: 430 SLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAILALVVLGFNEFMTLLRNPLWLLV 489 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA---LIPVILTIS 349 + G L+ + I F ++G+L + + IP ++ + Sbjct: 490 LFVGYLVSKALWVQLNISGEF-QNGVLPGLLSLSTKFIPTVMNLL 533 >gi|42572425|ref|NP_974308.1| RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding [Arabidopsis thaliana] gi|332641907|gb|AEE75428.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis thaliana] Length = 738 Score = 35.8 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + K + + A + + P ++A+ ++ + + R+ ++ Sbjct: 583 SLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAILALVVLGFNEFMTLLRNPLWLLV 642 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA---LIPVILTIS 349 + G L+ + I F ++G+L + + IP ++ + Sbjct: 643 LFVGYLVSKALWVQLNISGEF-QNGVLPGLLSLSTKFIPTVMNLL 686 >gi|15231390|ref|NP_188003.1| RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding [Arabidopsis thaliana] gi|75279781|sp|P93042|RHD3_ARATH RecName: Full=Protein ROOT HAIR DEFECTIVE 3; AltName: Full=Protein FRAGILE FIBER 4; AltName: Full=Protein SEY1 homolog 1 gi|1839188|gb|AAB58375.1| root hair defective 3 [Arabidopsis thaliana] gi|20260178|gb|AAM12987.1| unknown protein [Arabidopsis thaliana] gi|22136246|gb|AAM91201.1| unknown protein [Arabidopsis thaliana] gi|332641908|gb|AEE75429.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis thaliana] Length = 802 Score = 35.8 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 248 SFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRII 307 S + K + + A + + P ++A+ ++ + + R+ ++ Sbjct: 647 SLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAILALVVLGFNEFMTLLRNPLWLLV 706 Query: 308 VAYGIFSGFMLYTIITIMKSFGKSGILLPVAAA---LIPVILTIS 349 + G L+ + I F ++G+L + + IP ++ + Sbjct: 707 LFVGYLVSKALWVQLNISGEF-QNGVLPGLLSLSTKFIPTVMNLL 750 >gi|258597760|ref|XP_001348489.2| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] gi|255528833|gb|AAN36928.2| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] Length = 5757 Score = 35.8 bits (80), Expect = 9.9, Method: Composition-based stats. Identities = 22/214 (10%), Positives = 57/214 (26%) Query: 8 YFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQII 67 Y ++ + + + + L + + L ++ + +I Sbjct: 645 YLYRDCIISFFLLYIFILYLYKYYNHIIKIRDISRLSYIIYVVVLLIHIMMYIKCLYNLI 704 Query: 68 PFITLVVNIVVFFNLNRTSELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSG 127 I+LV+ VF N + + + I N +L + + Sbjct: 705 RIISLVMFFFVFINTSLSYPNMKINNIIAYYNNTYNSICKFYLLYIPTIFNMYKYSSLLI 764 Query: 128 EKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGAKKILPENHIWEDFTSITIDKK 187 I I + + I + S A + + + + D++ Sbjct: 765 CIYFIHTINVFVNCVTFILLHFIMILSFSLFMDMYICSAPILYDTHLSKKKIMNFEKDRR 824 Query: 188 NKIIHRKDADLAIIYNDKVKLKKVVEYQYGRIPI 221 + + + + + L K+ Y Sbjct: 825 YTFVSYSSSYALMRTINLIHLNKLYIYDIFIKRN 858 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.314 0.101 0.235 Lambda K H 0.267 0.0310 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,449,926,319 Number of Sequences: 14124377 Number of extensions: 49308627 Number of successful extensions: 1280895 Number of sequences better than 10.0: 10000 Number of HSP's better than 10.0 without gapping: 3074 Number of HSP's successfully gapped in prelim test: 10877 Number of HSP's that attempted gapping in prelim test: 1245319 Number of HSP's gapped (non-prelim): 32779 length of query: 361 length of database: 4,842,793,630 effective HSP length: 140 effective length of query: 221 effective length of database: 2,865,380,850 effective search space: 633249167850 effective search space used: 633249167850 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.4 bits) S2: 81 (36.2 bits)