HHsearch alignment for GI: 255764470 and conserved domain: COG4109

>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription].
Probab=99.37  E-value=1.1e-11  Score=104.37  Aligned_cols=129  Identities=26%  Similarity=0.402  Sum_probs=112.8

Q ss_pred             HHHHHHH-----CCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC
Q ss_conf             9999751-----13786674653400028996089998999999985799788887678552788888888762020246
Q gi|255764470|r  293 DMVQSVL-----TLADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG  367 (523)
Q Consensus       293 ~mi~~vL-----~L~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~  367 (523)
T Consensus       172 tmIN~Al~n~lIKkdI~~Vedi~~P~~~~~yL~~~d~v~d~~~l~~kt~~sRfPVvn~~-~kvvGvVt~rDv~~~~---~  247 (432)
T COG4109         172 TMINKALSNQLIKKDIITVEDIMTPLEDTSYLRETDTVEDWLDLVEKTGHSRFPVVNRS-MKVVGVVTMRDVLDKK---P  247 (432)
T ss_pred             HHHHHHHHHHHHHHHEEEHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEECCC-CEEEEEEEEHHHHCCC---C
T ss_conf             99989987766644325587744644343232464509999999997198734133144-2699999834644479---9


Q ss_pred             CCHHHHHH-CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHC
Q ss_conf             60168873-27435238999899999885038627775228674256525999999870
Q gi|255764470|r  368 SMNFKRSI-RKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEAIA  425 (523)
Q Consensus       368 ~~~~~~li-r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~Iv  425 (523)
T Consensus       248 ~t~ieKVMtknp~tv~~~tsVAsvaq~MiwE~iem~PVv~~n~~llGiitR~dvlk~lq  306 (432)
T COG4109         248 STTIEKVMTKNPITVRAKTSVASVAQMMIWEGIEMLPVVDSNNTLLGIITRQDVLKSLQ  306 (432)
T ss_pred             CCCHHHHHCCCCEEECCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHHHHH
T ss_conf             86177774269755425226889988887645526568837861898988999999998