HHsearch alignment for GI: 255764470 and conserved domain: COG4109
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription].
Probab=99.37 E-value=1.1e-11 Score=104.37 Aligned_cols=129 Identities=26% Similarity=0.402 Sum_probs=112.8
Q ss_pred HHHHHHH-----CCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC
Q ss_conf 9999751-----13786674653400028996089998999999985799788887678552788888888762020246
Q gi|255764470|r 293 DMVQSVL-----TLADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG 367 (523)
Q Consensus 293 ~mi~~vL-----~L~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~ 367 (523)
T Consensus 172 tmIN~Al~n~lIKkdI~~Vedi~~P~~~~~yL~~~d~v~d~~~l~~kt~~sRfPVvn~~-~kvvGvVt~rDv~~~~---~ 247 (432)
T COG4109 172 TMINKALSNQLIKKDIITVEDIMTPLEDTSYLRETDTVEDWLDLVEKTGHSRFPVVNRS-MKVVGVVTMRDVLDKK---P 247 (432)
T ss_pred HHHHHHHHHHHHHHHEEEHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEECCC-CEEEEEEEEHHHHCCC---C
T ss_conf 99989987766644325587744644343232464509999999997198734133144-2699999834644479---9
Q ss_pred CCHHHHHH-CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHC
Q ss_conf 60168873-27435238999899999885038627775228674256525999999870
Q gi|255764470|r 368 SMNFKRSI-RKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEAIA 425 (523)
Q Consensus 368 ~~~~~~li-r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~Iv 425 (523)
T Consensus 248 ~t~ieKVMtknp~tv~~~tsVAsvaq~MiwE~iem~PVv~~n~~llGiitR~dvlk~lq 306 (432)
T COG4109 248 STTIEKVMTKNPITVRAKTSVASVAQMMIWEGIEMLPVVDSNNTLLGIITRQDVLKSLQ 306 (432)
T ss_pred CCCHHHHHCCCCEEECCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHHHHH
T ss_conf 86177774269755425226889988887645526568837861898988999999998