HHsearch alignment for GI: 255764470 and conserved domain: TIGR00393
>TIGR00393 kpsF sugar isomerase, KpsF/GutQ family; InterPro: IPR004800 This is a family of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. The group includes GutQ, a protein of the glucitol operon and KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of Escherichia coli.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process.
Probab=97.24 E-value=0.00037 Score=49.39 Aligned_cols=166 Identities=20% Similarity=0.194 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCC---HHHHH------HHHHHHHHCCCCCHHHHHHHHHHHCCCC---EEEEEEEEECCEE
Q ss_conf 7766765674415688876679---88899------9999677466789899999997511378---6674653400028
Q gi|255764470|r 249 RARTADAVLRLLGGKPIQPQGL---NVKAD------VLLPTQHEKHIISDQEKDMVQSVLTLAD---RPAKSIMTPRTEI 316 (523)
Q Consensus 249 ~eRtA~aVLRLlG~~~~~~~~~---~ee~~------~li~~~~~~g~l~~~E~~mi~~vL~L~e---~~V~~IMtPR~~i 316 (523)
T Consensus 88 La~~Ad~~L~i~v~kEaCP~~lAPTsSt~~TL~lGDaLa~al~~ArnF~~eDFA~~HPGG~LG~kLL~kV~dlm~t~d~l 167 (272)
T TIGR00393 88 LARAADYVLDIKVEKEACPLNLAPTSSTTVTLALGDALAVALMKARNFSEEDFAKFHPGGALGRKLLVKVKDLMQTDDEL 167 (272)
T ss_pred HHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 45306545766775302789897356899999988999999985258884244114870466678888767764066567
Q ss_pred EEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHH-HHCC-C--CCHHHHH-HCCCEEEC-CCCCHHHH
Q ss_conf 9960899989999999857997888876785527888888887620-2024-6--6016887-32743523-89998999
Q gi|255764470|r 317 VWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRD-LLEE-G--SMNFKRS-IRKPLVVH-ENISVLKL 390 (523)
Q Consensus 317 ~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~-~~~~-~--~~~~~~l-ir~~~~Vp-e~~~l~~l 390 (523)
T Consensus 168 P~v~~tas~~DAL~e~~~~~LG~~~v~~~~-~~~~Gv~tDGD~RR~l~~~g~~~l~~~v~~~mT~~p~~~~n~~~~l~~A 246 (272)
T TIGR00393 168 PLVAPTASFKDALLEMSRKRLGLAVVCDEN-EQLKGVFTDGDLRRVLALLGGGALKKEVKDFMTLGPKTLKNSDELLVEA 246 (272)
T ss_pred CCEECCCCCEEEEEEEECCCCCEEEEEECC-CCEEEEEECCHHHHHHHHHCCHHCCCCHHHHCCCCCEEEECHHHHHHHH
T ss_conf 822236772021023313786179997155-5246787146599999881660002312221068881340145689999
Q ss_pred HHHHHHCCCEEEEEECCCCCEEEEE
Q ss_conf 9988503862777522867425652
Q gi|255764470|r 391 MERLRKSSQTFVMVLDEYGVLEGMI 415 (523)
Q Consensus 391 L~~fr~~~~~lAiVvDE~G~~~GIV 415 (523)
T Consensus 247 ~~~l~~~kI~~~~vvdd~nkl~G~~ 271 (272)
T TIGR00393 247 LEFLKKRKITSLVVVDDENKLLGVL 271 (272)
T ss_pred HHHHHHCCCEEEEEECCCCEEEEEE
T ss_conf 9998727942899983897178753