HHsearch alignment for GI: 255764470 and conserved domain: cd04596
>cd04596 CBS_pair_DRTGG_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream. The function of the DRTGG domain, named after its conserved residues, is unknown. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.58 E-value=4.1e-14 Score=122.18 Aligned_cols=106 Identities=24% Similarity=0.386 Sum_probs=95.2
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH-CCCEEECCCCCHHHHHH
Q ss_conf 02899608999899999998579978888767855278888888876202024660168873-27435238999899999
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNFKRSI-RKPLVVHENISVLKLME 392 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~~~li-r~~~~Vpe~~~l~~lL~ 392 (523)
T Consensus 2 ~dv~~l~p~~tv~~a~~lm~~~~~~~~PVvd~~-~~lvGivt~~Di~~~~---~~~~v~~iM~~~~~~v~~~~~~~~~~~ 77 (108)
T cd04596 2 EDTGYLTTTDTVKDWHELNKETGHSRFPVVDEK-NKVVGIVTSKDVAGKD---PDTTIEKVMTKNPITVNPKTSVASVAH 77 (108)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEECCC-CEEEEEEEHHHHHHCC---CCCCHHHHEECCCCCCCCCCCHHHHHH
T ss_conf 988898999979999999998599889999689-9099999979975179---887267850047620599988999999
Q ss_pred HHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf 8850386277752286742565259999998
Q gi|255764470|r 393 RLRKSSQTFVMVLDEYGVLEGMITPANILEA 423 (523)
Q Consensus 393 ~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~ 423 (523)
T Consensus 78 ~m~~~~~~~lPVVde~~~lvGiIT~~Dil~A 108 (108)
T cd04596 78 MMIWEGIEMLPVVDDNKKLLGIISRQDVLKA 108 (108)
T ss_pred HHHHHCCCEEEEECCCCEEEEEEEHHHHHCC
T ss_conf 9998498778999169959999997996319