HHsearch alignment for GI: 255764470 and conserved domain: cd04596
>cd04596 CBS_pair_DRTGG_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream. The function of the DRTGG domain, named after its conserved residues, is unknown. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=97.42 E-value=0.00027 Score=50.44 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=28.6
Q ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 27435238999899999885038627775228674256525999999
Q gi|255764470|r 376 RKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 376 r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 2 ~dv~~l~p~~tv~~a~~lm~~~~~~~~PVvd~~~~lvGivt~~Di~~ 48 (108)
T cd04596 2 EDTGYLTTTDTVKDWHELNKETGHSRFPVVDEKNKVVGIVTSKDVAG 48 (108)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHH
T ss_conf 98889899997999999999859988999968990999999799751