HHsearch alignment for GI: 255764470 and conserved domain: cd04605
>cd04605 CBS_pair_MET2_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the MET2 domain. Met2 is a key enzyme in the biosynthesis of methionine. It encodes a homoserine transacetylase involved in converting homoserine to O-acetyl homoserine. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.26 E-value=5.7e-11 Score=99.22 Aligned_cols=107 Identities=14% Similarity=0.266 Sum_probs=95.7
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH-CCCEEECCCCCHHHHHH
Q ss_conf 02899608999899999998579978888767855278888888876202024660168873-27435238999899999
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNFKRSI-RKPLVVHENISVLKLME 392 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~~~li-r~~~~Vpe~~~l~~lL~ 392 (523)
T Consensus 2 r~vvtv~~~~tv~~a~~~m~~~~~~~lpVvd~~-~~~vGiit~~Di~~~~~~~~~-~v~~im~~~~~~~~~~~~~~~a~~ 79 (110)
T cd04605 2 RPVVTISEDASIKEAAKLMIEENINHLPVVDED-GRLVGIVTSWDISKAVARDKK-SVEDIMTRNVITATPDEPIDVAAR 79 (110)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECHHHHHHHHCCCC-CHHHCEEECHHHHHHHHHHHHHHH
T ss_conf 899898993999999999997299889999799-919999962278889870797-633604300120146558999999
Q ss_pred HHHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 885038627775228674256525999999
Q gi|255764470|r 393 RLRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 393 ~fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 80 ~m~~~~i~~lPVvD~~~~lvGiiT~~Di~k 109 (110)
T cd04605 80 KMERHNISALPVVDAENRVIGIITSEDISK 109 (110)
T ss_pred HHHHCCCEEEEEECCCCEEEEEEEHHHHCC
T ss_conf 999839619999918998999999377211