HHsearch alignment for GI: 255764470 and conserved domain: cd04606

>cd04606 CBS_pair_Mg_transporter This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE. MgtE and its homologs are found in eubacteria, archaebacteria, and eukaryota. Members of this family transport Mg2+ or other divalent cations into the cell via two highly conserved aspartates. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.06  E-value=3.2e-09  Score=86.40  Aligned_cols=102  Identities=19%  Similarity=0.205  Sum_probs=88.7

Q ss_pred             EECCCCHHHHHHHHHHCC-----CCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHC-CCEEECCCCCHHHHHH
Q ss_conf             608999899999998579-----9788887678552788888888762020246601688732-7435238999899999
Q gi|255764470|r  319 LDVNCVDEDLQWKILELG-----HSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNFKRSIR-KPLVVHENISVLKLME  392 (523)
Q Consensus       319 ld~~~s~~e~~~~i~~~~-----~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~~~lir-~~~~Vpe~~~l~~lL~  392 (523)
T Consensus         2 ~~~~~TV~eai~~lr~~~~~~~~~~~i~Vvd~~-~~l~G~vt~~dll~~---~~~~~v~~iM~~~~~~v~~~~~~~~a~~   77 (109)
T cd04606           2 VREDWTVGEALEYLRRNADDPETIYYIYVVDEE-GRLLGVVSLRDLLLA---DPDTPVSDIMDTDVISVSADDDQEEVAR   77 (109)
T ss_pred             CCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCC-CEEEEEEEHHHHHHC---CCCCCHHHHHCCCEEECCCCCCHHHHHH
T ss_conf             699889999999998518885617799999799-979999986772241---8887166630021363379998999999


Q ss_pred             HHHHCCCEEEEEECCCCCEEEEEEHHHHHHHH
Q ss_conf             88503862777522867425652599999987
Q gi|255764470|r  393 RLRKSSQTFVMVLDEYGVLEGMITPANILEAI  424 (523)
Q Consensus       393 ~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~I  424 (523)
T Consensus        78 ~m~~~~~~~lPVVd~~~~lvGiIt~~Di~~~~  109 (109)
T cd04606          78 LFEKYDLLALPVVDEEGRLVGIITVDDVIDVI  109 (109)
T ss_pred             HHHHHCCCEEEEECCCCEEEEEEEHHHHHHHC
T ss_conf             99985276046898899799999968968449