HHsearch alignment for GI: 255764470 and conserved domain: cd04608
>cd04608 CBS_pair_PALP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream. The vitamin B6 complex comprises pyridoxine, pyridoxal, and pyridoxamine, as well as the 5'-phosphate esters of pyridoxal (PALP) and pyridoxamine, the last two being the biologically active coenzyme derivatives. The members of the PALP family are principally involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and other amine-containing compounds. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a poten
Probab=97.41 E-value=0.0007 Score=47.38 Aligned_cols=84 Identities=19% Similarity=0.236 Sum_probs=60.8
Q ss_pred HCCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCH
Q ss_conf 32743523899989999988503862777522867425652599999987066445788863128834985998700119
Q gi|255764470|r 375 IRKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEAIAGDFPDEDDQKLDITVGDDGSLTVDGWIDV 454 (523)
Q Consensus 375 ir~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~IvGei~DE~d~~~~i~~~~d~~~~v~G~~~l 454 (523)
T Consensus 1 l~~~vtv~p~~tv~~a~~~m~~~~i~~lPVvd~~g~~~G~vt~~~ll~~~~~~~~~~~~~V~~v--m~~~~~~v~~~~~l 78 (124)
T cd04608 1 LKAPVTVLPTVTCAEAIEILKEKGFDQLPVVDESGKILGMVTLGNLLSSLSSGKVQPSDPVSKA--LYKQFKRVNKNDTL 78 (124)
T ss_pred CCCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCHHHH--HCCCCCCCCCCCCH
T ss_conf 9999798998909999999998499856898799968888879999999973899999828997--44656514799855
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|255764470|r 455 RYASKL 460 (523)
Q Consensus 455 ~el~~~ 460 (523)
T Consensus 79 ~~ls~~ 84 (124)
T cd04608 79 GKLSRI 84 (124)
T ss_pred HHHHCC
T ss_conf 673103