HHsearch alignment for GI: 255764470 and conserved domain: cd04613

>cd04613 CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC. SpoIVFB is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A ), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB. EriC is involved in inorganic ion transport and metabolism. CBS is a small domain originally identified in cystathionine beta-synthase a
Probab=97.78  E-value=0.00021  Score=51.15  Aligned_cols=84  Identities=20%  Similarity=0.185  Sum_probs=53.3

Q ss_pred             CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCHH
Q ss_conf             27435238999899999885038627775228674256525999999870664457888631288349859987001199
Q gi|255764470|r  376 RKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEAIAGDFPDEDDQKLDITVGDDGSLTVDGWIDVR  455 (523)
Q Consensus       376 r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~IvGei~DE~d~~~~i~~~~d~~~~v~G~~~l~  455 (523)
T Consensus         1 rdvvtv~~~~tl~ea~~~m~~~~~~~~pVvd~~~~lvGiit~~Dl~~~l~~~~~~~~~~v~~i--m~~~~~~v~~~~~l~   78 (114)
T cd04613           1 RDVVTIPEDTPLNELLDVIAHSPENNFPVVDDDGRLVGIVSLDDIREILFDPSLYDLVVASDI--MTKPPVVVYPEDSLE   78 (114)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCEEEHH--CCCCCEEEECCCCHH
T ss_conf             997695890989999999986199789999289949999999999999970566557293120--362965991367889


Q ss_pred             HHHHHH
Q ss_conf             999982
Q gi|255764470|r  456 YASKLF  461 (523)
Q Consensus       456 el~~~l  461 (523)
T Consensus        79 ~a~~~m   84 (114)
T cd04613          79 DALKKF   84 (114)
T ss_pred             HHHHHH
T ss_conf             999999