HHsearch alignment for GI: 255764470 and conserved domain: cd04617
>cd04617 CBS_pair_4 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.84 E-value=6.8e-08 Score=76.71 Aligned_cols=104 Identities=19% Similarity=0.195 Sum_probs=89.7
Q ss_pred EEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC---CCHHHHHHC---CCEEECCCCCHHHH
Q ss_conf 996089998999999985799788887678552788888888762020246---601688732---74352389998999
Q gi|255764470|r 317 VWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG---SMNFKRSIR---KPLVVHENISVLKL 390 (523)
Q Consensus 317 ~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~---~~~~~~lir---~~~~Vpe~~~l~~l 390 (523)
T Consensus 4 vtv~~~~si~eA~~~M~~~~ig~l~VVD~~-~~LvGIiT~rDl~r~~~~~~~~~~~pV~~iMT~~P~vvt~~pd~~v~~A 82 (118)
T cd04617 4 VVVRENTSVYDAIVTLFLEDVGSLFVVDED-GDLVGVVSRKDLLKASIGGADLQKVPVGVIMTRMPNITTTTPEESVLEA 82 (118)
T ss_pred EEECCCCCHHHHHHHHHHHCCCEEEEECCC-CCEEEEEEHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEECCCCCHHHH
T ss_conf 798996999999999998399879998499-9599998789999999748984678299985779971997899939999
Q ss_pred HHHHHHCCCEEEEEECCCC---CEEEEEEHHHHH
Q ss_conf 9988503862777522867---425652599999
Q gi|255764470|r 391 MERLRKSSQTFVMVLDEYG---VLEGMITPANIL 421 (523)
Q Consensus 391 L~~fr~~~~~lAiVvDE~G---~~~GIVTleDIl 421 (523)
T Consensus 83 ~~~M~~~~i~~LPVVd~~~~~~~vvGiIT~~Di~ 116 (118)
T cd04617 83 AKKLIEHQVDSLPVVEKVDEGLEVIGRITKTNIT 116 (118)
T ss_pred HHHHHHCCCCEECEEECCCCCEEEEEEEECCCEE
T ss_conf 9999982999856794399740899999775150