HHsearch alignment for GI: 255764470 and conserved domain: cd04620
>cd04620 CBS_pair_7 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=97.65 E-value=0.00032 Score=49.90 Aligned_cols=52 Identities=23% Similarity=0.343 Sum_probs=43.4
Q ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHCCC
Q ss_conf 2743523899989999988503862777522867425652599999987066
Q gi|255764470|r 376 RKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEAIAGD 427 (523)
Q Consensus 376 r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~IvGe 427 (523)
T Consensus 1 r~pitv~pd~tv~ea~~~M~~~~~~~~~vV~~~~~lvGIvT~~Di~r~~~~~ 52 (115)
T cd04620 1 RHPLTVTPDTPVADAIALMSQQGDSSCVLVVEKGRLLGIFTERDIVRLTAIG 52 (115)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHHCC
T ss_conf 9699969919999999999983994699993799299999869999999859