HHsearch alignment for GI: 255764470 and conserved domain: cd04623

>cd04623 CBS_pair_10 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.21  E-value=3.9e-10  Score=93.06  Aligned_cols=108  Identities=18%  Similarity=0.296  Sum_probs=93.7

Q ss_pred             CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC----CCHHHHHH-CCCEEECCCCCHH
Q ss_conf             028996089998999999985799788887678552788888888762020246----60168873-2743523899989
Q gi|255764470|r  314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG----SMNFKRSI-RKPLVVHENISVL  388 (523)
Q Consensus       314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~----~~~~~~li-r~~~~Vpe~~~l~  388 (523)
T Consensus         1 r~vvti~~~~tl~ea~~~m~~~~~~~l~Vvd~~-~~l~Giit~~Di~~~~~~~~~~~~~~~V~~iM~~~~~~v~~~~~l~   79 (113)
T cd04623           1 RDVITVRPDATVAEAAKLMAEKNIGAVVVVDDG-GRLVGIFSERDIVRKVALRGASALDTPVSEIMTRNVITVTPDDTVD   79 (113)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEEHHHHHHHHHHCCCCHHHCHHHHHCCCEEEEEECCCCHH
T ss_conf             997696893979999999997399889999089-8299999768999999864998466401231211028991699199


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf             99998850386277752286742565259999998
Q gi|255764470|r  389 KLMERLRKSSQTFVMVLDEYGVLEGMITPANILEA  423 (523)
Q Consensus       389 ~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~  423 (523)
T Consensus        80 ~a~~~m~~~~i~~lpV~d~-~~lvGiit~~Dllra  113 (113)
T cd04623          80 EAMALMTERRFRHLPVVDG-GKLVGIVSIGDVVKA  113 (113)
T ss_pred             HHHHHHHHCCCEEEEEEEC-CEEEEEEEHHHHHCC
T ss_conf             9999999769259999999-999999997996469