HHsearch alignment for GI: 255764470 and conserved domain: cd04623
>cd04623 CBS_pair_10 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.70 E-value=0.00033 Score=49.79 Aligned_cols=56 Identities=25% Similarity=0.427 Sum_probs=35.8
Q ss_pred CCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHH
Q ss_conf 786674653400028996089998999999985799788887678552788888888762
Q gi|255764470|r 302 ADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLR 361 (523)
Q Consensus 302 ~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~ 361 (523)
T Consensus 57 ~~~~V~~iM~~--~~~~v~~~~~l~~a~~~m~~~~i~~lpV~d~--~~lvGiit~~Dllr 112 (113)
T cd04623 57 LDTPVSEIMTR--NVITVTPDDTVDEAMALMTERRFRHLPVVDG--GKLVGIVSIGDVVK 112 (113)
T ss_pred HHCHHHHHCCC--EEEEEECCCCHHHHHHHHHHCCCEEEEEEEC--CEEEEEEEHHHHHC
T ss_conf 66401231211--0289916991999999999769259999999--99999999799646