HHsearch alignment for GI: 255764470 and conserved domain: cd04624

>cd04624 CBS_pair_11 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.26  E-value=6.4e-11  Score=98.83  Aligned_cols=109  Identities=20%  Similarity=0.254  Sum_probs=95.4

Q ss_pred             CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCC--CHHHHH-HCCCEEECCCCCHHHH
Q ss_conf             0289960899989999999857997888876785527888888887620202466--016887-3274352389998999
Q gi|255764470|r  314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGS--MNFKRS-IRKPLVVHENISVLKL  390 (523)
Q Consensus       314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~--~~~~~l-ir~~~~Vpe~~~l~~l  390 (523)
T Consensus         1 r~vvtv~~~~tl~ea~~~m~~~~~~~~~Vvd~~-~~lvGiiT~~Di~~~~~~~~~~~~~v~~~m~~~~~tv~~~~~l~~a   79 (112)
T cd04624           1 RPVVTVDPDTSIREAAKLMAEENVGSVVVVDPD-ERPIGIVTERDIVRAVAAGIDLDTPVSEIMTRDLVTVDPDEPVAEA   79 (112)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCHHHH
T ss_conf             997897893959999999986299889999399-8299999820458898648743442045651671678799989999


Q ss_pred             HHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf             998850386277752286742565259999998
Q gi|255764470|r  391 MERLRKSSQTFVMVLDEYGVLEGMITPANILEA  423 (523)
Q Consensus       391 L~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~  423 (523)
T Consensus        80 ~~~m~~~~~~~l~Vvd~~g~lvGiit~~Dilke  112 (112)
T cd04624          80 AKLMRKNNIRHHLVVDKGGELVGVISIRDLVRE  112 (112)
T ss_pred             HHHHHHCCCEEEEEECCCCEEEEEEEHHHHCCC
T ss_conf             999997498399899899999999980772569