HHsearch alignment for GI: 255764470 and conserved domain: cd04624
>cd04624 CBS_pair_11 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.26 E-value=6.4e-11 Score=98.83 Aligned_cols=109 Identities=20% Similarity=0.254 Sum_probs=95.4
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCC--CHHHHH-HCCCEEECCCCCHHHH
Q ss_conf 0289960899989999999857997888876785527888888887620202466--016887-3274352389998999
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGS--MNFKRS-IRKPLVVHENISVLKL 390 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~--~~~~~l-ir~~~~Vpe~~~l~~l 390 (523)
T Consensus 1 r~vvtv~~~~tl~ea~~~m~~~~~~~~~Vvd~~-~~lvGiiT~~Di~~~~~~~~~~~~~v~~~m~~~~~tv~~~~~l~~a 79 (112)
T cd04624 1 RPVVTVDPDTSIREAAKLMAEENVGSVVVVDPD-ERPIGIVTERDIVRAVAAGIDLDTPVSEIMTRDLVTVDPDEPVAEA 79 (112)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEECCHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCHHHH
T ss_conf 997897893959999999986299889999399-8299999820458898648743442045651671678799989999
Q ss_pred HHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf 998850386277752286742565259999998
Q gi|255764470|r 391 MERLRKSSQTFVMVLDEYGVLEGMITPANILEA 423 (523)
Q Consensus 391 L~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~ 423 (523)
T Consensus 80 ~~~m~~~~~~~l~Vvd~~g~lvGiit~~Dilke 112 (112)
T cd04624 80 AKLMRKNNIRHHLVVDKGGELVGVISIRDLVRE 112 (112)
T ss_pred HHHHHHCCCEEEEEECCCCEEEEEEEHHHHCCC
T ss_conf 999997498399899899999999980772569