HHsearch alignment for GI: 255764470 and conserved domain: cd04629

>cd04629 CBS_pair_16 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.14  E-value=1.1e-09  Score=89.74  Aligned_cols=107  Identities=25%  Similarity=0.347  Sum_probs=92.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCC-----CCCHHHHHH-CCCEEECCCCCHH
Q ss_conf             2899608999899999998579978888767855278888888876202024-----660168873-2743523899989
Q gi|255764470|r  315 EIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEE-----GSMNFKRSI-RKPLVVHENISVL  388 (523)
Q Consensus       315 ~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~-----~~~~~~~li-r~~~~Vpe~~~l~  388 (523)
T Consensus         2 ~pvtv~~~~tl~~a~~~m~~~~~~~~pVvd~~-~~lvGiit~~Dll~~~~~~~~~~~~~~~v~~iM~~~~~tv~~~~~~~   80 (114)
T cd04629           2 NPVTFTPDMSVTEAVEKLLKSKISGGPVVDDN-GNLVGFLSEQDCLKQLLESSYHCDGVATVRDIMTTEVLTVSPDDSIV   80 (114)
T ss_pred             CCEEECCCCCHHHHHHHHHHHCCCEEEEECCC-CEEEEEEEHHHHHHHHHHHHCCCCCCCEEHHHCCCCCEEEECCCCHH
T ss_conf             89997992999999999997199789999489-92999996789999997754058876591885146887995799999


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf             99998850386277752286742565259999998
Q gi|255764470|r  389 KLMERLRKSSQTFVMVLDEYGVLEGMITPANILEA  423 (523)
Q Consensus       389 ~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~  423 (523)
T Consensus        81 ~a~~~m~~~~~~~lpVvd~-g~lvGiIt~~DilrA  114 (114)
T cd04629          81 DLAQLMLKAKPKRYPVVDD-GKLVGQISRRDVLRA  114 (114)
T ss_pred             HHHHHHHHCCCCEEEEEEC-CEEEEEEEHHHHHCC
T ss_conf             9999988669839999989-999999997996339