HHsearch alignment for GI: 255764470 and conserved domain: cd04631
>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.44 E-value=0.0012 Score=45.69 Aligned_cols=52 Identities=23% Similarity=0.397 Sum_probs=32.2
Q ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEEEECC-CCCEEEEEEHHHHHHHHCCC
Q ss_conf 27435238999899999885038627775228-67425652599999987066
Q gi|255764470|r 376 RKPLVVHENISVLKLMERLRKSSQTFVMVLDE-YGVLEGMITPANILEAIAGD 427 (523)
Q Consensus 376 r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE-~G~~~GIVTleDIlE~IvGe 427 (523)
T Consensus 1 r~vvtv~~~~tl~ea~~~m~~~~v~~~PVvd~~~~~lvGiit~~Di~~~~~~~ 53 (125)
T cd04631 1 KDVVTVPPTTPIMEAAKIMVRNGFRRLPVVDEGTGKLVGIITATDILKYLGGG 53 (125)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCC
T ss_conf 99779799094999999999839988999979999599999999999987335