HHsearch alignment for GI: 255764470 and conserved domain: cd04632

>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.28  E-value=1.2e-10  Score=96.76  Aligned_cols=109  Identities=19%  Similarity=0.302  Sum_probs=92.2

Q ss_pred             CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC----------------CCHHHHH-HC
Q ss_conf             028996089998999999985799788887678552788888888762020246----------------6016887-32
Q gi|255764470|r  314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG----------------SMNFKRS-IR  376 (523)
Q Consensus       314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~----------------~~~~~~l-ir  376 (523)
T Consensus         1 kdvvTv~~~~~l~~a~~lm~~~~i~~lPVvd~~-g~lvGiiT~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~iM~~   79 (128)
T cd04632           1 EDVITVREDDSVGKAINVLREHGISRLPVVDDN-GKLTGIVTRHDIVDFVVRDRDKARTGDRSGEKERMLDLPVYDAMSS   79 (128)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEEHHHHHHHHHCCCHHCCHHHHCCHHHHHHCCCHHHHCCC
T ss_conf             998698995929999999998399779999689-9789999889999988532101011221001223406799996679


Q ss_pred             CCEEECCCCCHHHHHHHHHHCCCEEEEEE--CCCCCEEEEEEHHHHHHH
Q ss_conf             74352389998999998850386277752--286742565259999998
Q gi|255764470|r  377 KPLVVHENISVLKLMERLRKSSQTFVMVL--DEYGVLEGMITPANILEA  423 (523)
Q Consensus       377 ~~~~Vpe~~~l~~lL~~fr~~~~~lAiVv--DE~G~~~GIVTleDIlE~  423 (523)
T Consensus        80 ~vitv~~~~~i~~a~~~M~~~~i~~lpVv~~dd~~~lvGIiT~~DilrA  128 (128)
T cd04632          80 PVITASPNDSVRDAVDRMLENDDSSVVVVTPDDDTKVVGILTKKDVLRA  128 (128)
T ss_pred             CCEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHCC
T ss_conf             9879999293999999999779978966847899989999996996469