HHsearch alignment for GI: 255764470 and conserved domain: cd04632
>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.28 E-value=1.2e-10 Score=96.76 Aligned_cols=109 Identities=19% Similarity=0.302 Sum_probs=92.2
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC----------------CCHHHHH-HC
Q ss_conf 028996089998999999985799788887678552788888888762020246----------------6016887-32
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG----------------SMNFKRS-IR 376 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~----------------~~~~~~l-ir 376 (523)
T Consensus 1 kdvvTv~~~~~l~~a~~lm~~~~i~~lPVvd~~-g~lvGiiT~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~iM~~ 79 (128)
T cd04632 1 EDVITVREDDSVGKAINVLREHGISRLPVVDDN-GKLTGIVTRHDIVDFVVRDRDKARTGDRSGEKERMLDLPVYDAMSS 79 (128)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEEHHHHHHHHHCCCHHCCHHHHCCHHHHHHCCCHHHHCCC
T ss_conf 998698995929999999998399779999689-9789999889999988532101011221001223406799996679
Q ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEEEE--CCCCCEEEEEEHHHHHHH
Q ss_conf 74352389998999998850386277752--286742565259999998
Q gi|255764470|r 377 KPLVVHENISVLKLMERLRKSSQTFVMVL--DEYGVLEGMITPANILEA 423 (523)
Q Consensus 377 ~~~~Vpe~~~l~~lL~~fr~~~~~lAiVv--DE~G~~~GIVTleDIlE~ 423 (523)
T Consensus 80 ~vitv~~~~~i~~a~~~M~~~~i~~lpVv~~dd~~~lvGIiT~~DilrA 128 (128)
T cd04632 80 PVITASPNDSVRDAVDRMLENDDSSVVVVTPDDDTKVVGILTKKDVLRA 128 (128)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHCC
T ss_conf 9879999293999999999779978966847899989999996996469