HHsearch alignment for GI: 255764470 and conserved domain: cd04632
>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.53 E-value=0.00015 Score=52.32 Aligned_cols=59 Identities=24% Similarity=0.316 Sum_probs=33.1
Q ss_pred CCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEEC-CCCCCEEEEEEHHHHHH
Q ss_conf 37866746534000289960899989999999857997888876-78552788888888762
Q gi|255764470|r 301 LADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQ-GSLDSFIGIVSARDLLR 361 (523)
Q Consensus 301 L~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~-~~~D~iiGiv~~kDLl~ 361 (523)
T Consensus 68 ~~~~~V~~iM~--~~vitv~~~~~i~~a~~~M~~~~i~~lpVv~~dd~~~lvGIiT~~Dilr 127 (128)
T cd04632 68 MLDLPVYDAMS--SPVITASPNDSVRDAVDRMLENDDSSVVVVTPDDDTKVVGILTKKDVLR 127 (128)
T ss_pred HHCCCHHHHCC--CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHC
T ss_conf 40679999667--9987999929399999999977997896684789998999999699646