HHsearch alignment for GI: 255764470 and conserved domain: cd04638

>cd04638 CBS_pair_25 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.20  E-value=3.6e-10  Score=93.35  Aligned_cols=105  Identities=27%  Similarity=0.392  Sum_probs=92.0

Q ss_pred             CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHH-HHCCCEEECCCCCHHHHHH
Q ss_conf             028996089998999999985799788887678552788888888762020246601688-7327435238999899999
Q gi|255764470|r  314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNFKR-SIRKPLVVHENISVLKLME  392 (523)
Q Consensus       314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~~~-lir~~~~Vpe~~~l~~lL~  392 (523)
T Consensus         1 kdvvtv~~~~tv~ea~~lm~~~~i~~lpVvd~~-~~lvGivT~~Dl~~~~~~---~~v~~iMt~~~~tv~~~~~~~~a~~   76 (106)
T cd04638           1 ENVVYVTLPGTRDDVLELLKEYKVSGVPVVKKS-GELVGIITRKDLLRNPEE---EQLALLMTRDPPTVSPDDDVKEAAK   76 (106)
T ss_pred             CCCEEECCCCCHHHHHHHHHHHCCCEEEEECCC-CEEEEEEEHHHHHHCCCC---CHHHHHHCCCCEECCCCCCHHHHHH
T ss_conf             998999994969999999997699989999389-999999897896448750---2446753589736799491999999


Q ss_pred             HHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf             8850386277752286742565259999998
Q gi|255764470|r  393 RLRKSSQTFVMVLDEYGVLEGMITPANILEA  423 (523)
Q Consensus       393 ~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~  423 (523)
T Consensus        77 ~m~~~~i~~lpVvd~-~~lvGiIt~~DilkA  106 (106)
T cd04638          77 LMVENNIRRVPVVDD-GKLVGIVTVADIVRA  106 (106)
T ss_pred             HHHHCCCCEEEEEEC-CEEEEEEEHHHHHCC
T ss_conf             998769759999999-999999997995359