HHsearch alignment for GI: 255764470 and conserved domain: cd04639
>cd04639 CBS_pair_26 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.50 E-value=6.1e-13 Score=113.58 Aligned_cols=108 Identities=24% Similarity=0.355 Sum_probs=96.0
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC-CCHHHHHH-CCCEEECCCCCHHHHH
Q ss_conf 028996089998999999985799788887678552788888888762020246-60168873-2743523899989999
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG-SMNFKRSI-RKPLVVHENISVLKLM 391 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~-~~~~~~li-r~~~~Vpe~~~l~~lL 391 (523)
T Consensus 1 T~~~Tv~p~~tl~~a~~~~~~~~~~~~PVvd~~-g~lvGivt~~di~~~l~~~~~~~~V~~vM~~~v~tv~~~~~l~~~~ 79 (111)
T cd04639 1 THFETLSPADTLDDAADALLATTQHEFPVVDGD-GHLVGLLTRDDLIRALAEGGPDAPVRGVMRRDFPTVSPSATLDAVL 79 (111)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEEECC-CCEEEEEEHHHHHHHHHCCCCCCCHHHHCCCCCEEECCCCCHHHHH
T ss_conf 988792998979999999997199789999389-9889999899999998726999705763546987998999499999
Q ss_pred HHHHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 9885038627775228674256525999999
Q gi|255764470|r 392 ERLRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 392 ~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 80 ~~m~~~~~~~lpVVd~~g~lvGivT~~Di~E 110 (111)
T cd04639 80 RLMQQGGAPAVPVVDGSGRLVGLVTLENVGE 110 (111)
T ss_pred HHHHHCCCCEEEEECCCCEEEEEEEHHHHHC
T ss_conf 9999589988989957992999999788544