HHsearch alignment for GI: 255764470 and conserved domain: cd04802

>cd04802 CBS_pair_3 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.98  E-value=1e-08  Score=82.68  Aligned_cols=105  Identities=17%  Similarity=0.292  Sum_probs=90.4

Q ss_pred             CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCC----CCCHHHHHH-CCCEEECCCCCHH
Q ss_conf             02899608999899999998579978888767855278888888876202024----660168873-2743523899989
Q gi|255764470|r  314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEE----GSMNFKRSI-RKPLVVHENISVL  388 (523)
Q Consensus       314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~----~~~~~~~li-r~~~~Vpe~~~l~  388 (523)
T Consensus         1 r~vvti~~~~tl~~a~~~m~~~~i~~l~V~d~--~~~vGivt~~Di~~~~~~~~~~~~~~~v~~iM~~~~~tv~~~~~l~   78 (112)
T cd04802           1 KNVITVDPDTTVYEAANIMTENNIGRLIVVDN--EKPVGIITERDLVKKVVSRNLKPREVPVGEVMSTPLITIDPNASLN   78 (112)
T ss_pred             CCCEEECCCCCHHHHHHHHHHHCCCEEEEEEC--CEEEEEEEECHHHHHHHHCCCCCCCCCHHHHHCCCCEEECCCCHHH
T ss_conf             99789689198999999999749987999989--9999999821878888754798123899997234855994798699


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHH
Q ss_conf             999988503862777522867425652599999
Q gi|255764470|r  389 KLMERLRKSSQTFVMVLDEYGVLEGMITPANIL  421 (523)
Q Consensus       389 ~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIl  421 (523)
T Consensus        79 ~a~~~m~~~~~~~lpVvd~-~~lvGiIt~~Dil  110 (112)
T cd04802          79 EAAKLMAKHGIKRLPVVDD-DELVGIVTTTDIV  110 (112)
T ss_pred             HHHHHHHHHCCCEEEEEEC-CEEEEEEECHHHC
T ss_conf             9999878719858999989-9999999806710