HHsearch alignment for GI: 255764470 and conserved domain: pfam01810
>pfam01810 LysE LysE type translocator. This family consists of various hypothetical proteins and an l-lysine exporter LysE from Corynebacterium glutamicum which is proposed to be the first of a novel family of translocators. LysE exports l-lysine from the cell into the surrounding medium and is predicted to span the membrane six times. The physiological function of the exporter is to excrete excess l-Lysine as a result of natural flux imbalances or peptide hydrolysis; and also after artificial deregulation of l-Lysine biosynthesis as used by the biotechnology. industry for the production of l-lysine.
Probab=90.68 E-value=1.3 Score=23.48 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97443999999985179989999999999999--9999999999999999974247999863453222489999999999
Q gi|255764470|r 24 VLGIDNLIFITLLVEKLPLAQRGKALVFGLTF--AMVTRIALLASLSYWIVMLQQPLFFLKGLSFSGRDIVLILGGFFLL 101 (523)
Q Consensus 24 vLs~DN~i~iai~~~~Lp~~~r~~a~~~Gl~~--A~v~R~~ll~~~~~wi~~l~~pl~~i~~~~~s~~~lill~GG~fLl 101 (523)
T Consensus 6 sPGP~~~~vi~~~~~~----G~~~~~~~~~G~~~g~~~~~~l~~~Gl~~l~~~~-~---------~~~~~l~~~G~~yL~ 71 (191)
T pfam01810 6 PPGPVNAFVLTQSIRR----GFKHGLLVGLGAALGDAVLILLGLFGLAVLLGAS-P---------ILFTVLKLGGGAYLL 71 (191)
T ss_pred CCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---------HHHHHHHHHHHHHHH
T ss_conf 5767899999999985----8799999999999999999999999999999865-9---------999999999999999
Q ss_pred HHHHHHHHHHCCCCC
Q ss_conf 998655553025764
Q gi|255764470|r 102 FKGTIELHERLEGDG 116 (523)
Q Consensus 102 ~k~~~el~~~~e~~~ 116 (523)
T Consensus 72 ylg~~~~~~~~~~~~ 86 (191)
T pfam01810 72 YLGILTLRAAWSPKS 86 (191)
T ss_pred HHHHHHHHHCCCCCC
T ss_conf 999999982456543