HHsearch alignment for GI: 255764471 and conserved domain: PRK04004

>PRK04004 translation initiation factor IF-2; Validated.
Probab=99.86  E-value=1.1e-21  Score=165.07  Aligned_cols=150  Identities=21%  Similarity=0.365  Sum_probs=111.0

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHCCCEEEECCCC-CCEEEEEEEEEEECCE------------------EEEEEECCCCCC
Q ss_conf             508999718988788899998588501025898-5302238999998998------------------999996588420
Q gi|255764471|r    2 IYTIAIVGAPNVGKSTLFNRLVKKKMAVVGNHP-GITRDRLYGQAIINGV------------------IFNIVDTAGIAD   62 (470)
Q Consensus         2 ~~~iaivG~pNvGKStL~N~l~~~~~aiv~~~~-g~Trd~~~~~~~~~~~------------------~~~liDT~G~~~   62 (470)
T Consensus         5 ~PIvtimGHVDhGKTsLLD~iR~t~V--~~~EaGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipgllfiDTPGH--   80 (592)
T PRK04004          5 QPIVVVLGHVDHGKTTLLDKIRGTAV--AAKEAGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPGLLFIDTPGH--   80 (592)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCC--CCCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCH--
T ss_conf             98899978737776368999862877--35557762323065984123101103443344332345677557659965--


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHH----------------
Q ss_conf             7636899999999999998779899997598877623445553321023322220565223012----------------
Q gi|255764471|r   63 GKNCSIAKQMNDQTELAINEAHLILFLIDSKAGITPYDHAITSFLRKKNIPIIIVSNKMDTRIA----------------  126 (470)
Q Consensus        63 ~~~~~~~~~i~~~~~~ai~~aD~il~vvD~~~g~~~~D~~i~~~lr~~~~~~ilv~NK~D~~~~----------------  126 (470)
T Consensus        81 ---eaFt~-mR~---RGa~vtDiaILVVa~~dGv~pQT~EaI~~~k~~~vP~IVAiNKiDr~~gw~~~~~~~~~~~~~~q  153 (592)
T PRK04004         81 ---EAFSN-LRK---RGGALADIAILVVDINEGFQPQTIESLNILKSRKTPFVVAANKIDRIPGWKSVEGAPFLESFKKQ  153 (592)
T ss_pred             ---HHHHH-HHH---HCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHC
T ss_conf             ---99999-997---36745788999997788867627999999997599889998622356667767674112322317


Q ss_pred             --------H----HHHHHHHHHCCC--------------CCEEEHHHCCCCCHHHHHHHHHH
Q ss_conf             --------1----001245531222--------------20100111022201479999998
Q gi|255764471|r  127 --------Q----RNFYEIYSLDFK--------------EIVEISAEHDLGTSELHSVIFKI  162 (470)
Q Consensus       127 --------~----~~~~e~~~lg~~--------------~~i~iSA~~g~Gi~~L~~~i~~~  162 (470)
T Consensus       154 ~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGeGi~dLL~~i~~L  215 (592)
T PRK04004        154 SERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGEGIPDLLMVLAGL  215 (592)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf             38899999888888889998728763221454345881489978205689989999999999