HHsearch alignment for GI: 255764471 and conserved domain: PRK05306
>PRK05306 infB translation initiation factor IF-2; Validated.
Probab=99.88 E-value=2.8e-22 Score=169.08 Aligned_cols=167 Identities=20% Similarity=0.340 Sum_probs=106.4
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEE-CCEEEEEEECHHCCCCCCCCCHHHHHHCCC
Q ss_conf 4443038864035642567887652012110002456654202311420-340699981711044444300011100012
Q gi|255764471|r 200 ISKPLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNW-KNHPIEIFDTAGMRKPSRITESLEQKTVKK 278 (470)
Q Consensus 200 ~~~~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~-~~~~~~liDTaGirkk~~~~~~~E~~s~~~ 278 (470)
T Consensus 338 ~~r~pvvt~mghvdhgkt~lld~~r~~~-v~~~e~ggitq~iga~~v~~~~~~~itf~dtpg----------h~af~~mr 406 (839)
T PRK05306 338 VPRPPVVTIMGHVDHGKTSLLDAIRKTK-VAAGEAGGITQHIGAYQVETENGKKITFLDTPG----------HEAFTAMR 406 (839)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCC-CCCCCCCCCCCEEEEEEEEECCCCEEEEECCCC----------HHHHHHHH
T ss_conf 6689889885774677314899986287-535567875522234999956998799855885----------58899998
Q ss_pred CCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 1001201205998455321220212232000000357665589442233541-555666542013332004883111234
Q gi|255764471|r 279 SMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDK-LNLLQDLRTKAIKNLPQIGDIYINTIS 357 (470)
Q Consensus 279 t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~-~~~~~~~~~~~~~~~~~~~~~~i~~iS 357 (470)
T Consensus 407 ~rga-~~tdi~ilvvaaddgv~pqt~eai~~~~~a~vp~ivaink~d~~~a~~~~v~~~l~~~~~~~e~~gg~~~~v~~s 485 (839)
T PRK05306 407 ARGA-QVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPGANPDRVKQELTEYGLVPEEWGGDTIFVPVS 485 (839)
T ss_pred HCCC-CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEEE
T ss_conf 6357-654369999977777567789999999974998899974046788988999999998498645428944899815
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 533348589999999999984
Q gi|255764471|r 358 GRTGEGLDDLMVSVLEINKLW 378 (470)
Q Consensus 358 A~~g~gi~~l~~~i~~~~~~~ 378 (470)
T Consensus 486 a~~~~~~~~l~e~i~l~ae~~ 506 (839)
T PRK05306 486 AKTGEGIDELLEAILLQAEVL 506 (839)
T ss_pred ECCCCCHHHHHHHHHHHHHHH
T ss_conf 157887899999999876652