HHsearch alignment for GI: 255764471 and conserved domain: TIGR01393
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=99.76 E-value=2e-18 Score=143.16 Aligned_cols=155 Identities=22% Similarity=0.362 Sum_probs=123.4
Q ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCH--------------HHHHHHHHCCCCEEEEC----C--EEEEEEECHHCCC
Q ss_conf 03886403564256788765201211000--------------24566542023114203----4--0699981711044
Q gi|255764471|r 204 LRIAVVGRPNVGKSTLINRLLGYNRLLTG--------------SQSGITRDSVSISWNWK----N--HPIEIFDTAGMRK 263 (470)
Q Consensus 204 i~~~~~G~pN~GKStl~N~l~~~~r~ivs--------------~~~GtTrD~i~~~~~~~----~--~~~~liDTaGirk 263 (470)
T Consensus 4 RNFsIIAHIDHGKSTLADRlle~T~~~s~R~m~~Q~LD~MDlERERGITIK~qaV~l~Yk~~~DGe~Y~LNLIDTPG--- 80 (598)
T TIGR01393 4 RNFSIIAHIDHGKSTLADRLLEKTGAVSEREMREQVLDSMDLERERGITIKAQAVRLKYKVAKDGETYVLNLIDTPG--- 80 (598)
T ss_pred CCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEEECCCCEEECCCEEEEEEEECCCCEEEEEEECCCC---
T ss_conf 52678846248932488999986174562025430577510000058201156347533753388788996452889---
Q ss_pred CCCCCCHHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 44430001110001210012012059984553212202122320000003576655894422335415556665420133
Q gi|255764471|r 264 PSRITESLEQKTVKKSMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIK 343 (470)
Q Consensus 264 k~~~~~~~E~~s~~~t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~ 343 (470)
T Consensus 81 --HVDFsYE---VSRSLAACEG---ALL~VDA~QGvEAQT~aN~YlAlE~dLeIIPViNKIDLP~Adp---e~v~~eIe~ 149 (598)
T TIGR01393 81 --HVDFSYE---VSRSLAACEG---ALLLVDAAQGVEAQTLANVYLALENDLEIIPVINKIDLPSADP---ERVKKEIEE 149 (598)
T ss_pred --CCCCCHH---HHHHHHHHCC---EEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH---HHHHHHHHH
T ss_conf --7212737---8888887164---0356141032358889999887561875847782536888885---899998765
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 320048831112345333485899999999
Q gi|255764471|r 344 NLPQIGDIYINTISGRTGEGLDDLMVSVLE 373 (470)
Q Consensus 344 ~~~~~~~~~i~~iSA~~g~gi~~l~~~i~~ 373 (470)
T Consensus 150 ~iG-ld~~~ai~~SAKtG~Gi~e~LEaIv~ 178 (598)
T TIGR01393 150 VIG-LDASEAILASAKTGIGIEEILEAIVK 178 (598)
T ss_pred HCC-CCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 418-89643038750367888999889710