HHsearch alignment for GI: 255764471 and conserved domain: cd00881
>cd00881 GTP_translation_factor GTP translation factor family. This family consists primarily of translation initiation, elongation, and release factors, which play specific roles in protein translation. In addition, the family includes Snu114p, a component of the U5 small nuclear riboprotein particle which is a component of the spliceosome and is involved in excision of introns, TetM, a tetracycline resistance gene that protects the ribosome from tetracycline binding, and the unusual subfamily CysN/ATPS, which has an unrelated function (ATP sulfurylase) acquired through lateral transfer of the EF1-alpha gene and development of a new function.
Probab=99.95 E-value=8.9e-27 Score=199.39 Aligned_cols=152 Identities=22% Similarity=0.282 Sum_probs=123.6
Q ss_pred EEEECCCCCCHHHHHHHHHCCCEEEECCC---------------CCCEEEEEEEEEEECCEEEEEEECCCCCCCCHHHHH
Q ss_conf 99971898878889999858850102589---------------853022389999989989999965884207636899
Q gi|255764471|r 5 IAIVGAPNVGKSTLFNRLVKKKMAVVGNH---------------PGITRDRLYGQAIINGVIFNIVDTAGIADGKNCSIA 69 (470)
Q Consensus 5 iaivG~pNvGKStL~N~l~~~~~aiv~~~---------------~g~Trd~~~~~~~~~~~~~~liDT~G~~~~~~~~~~ 69 (470)
T Consensus 2 v~iiGh~d~GKTTL~~~Ll~~~~~~~~~~~~~~~~~d~~~~E~~rgiTi~~~~~~~~~~~~~i~~iDTPGh-----~~f~ 76 (189)
T cd00881 2 VGIAGHVDHGKTTLTERLLYVTGDIERDGTVEETFLDVLKEERERGITIKSGVATFEWPDRRVNFIDTPGH-----EDFS 76 (189)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEEEEECCEEEEEEECCCC-----HHHH
T ss_conf 89991799899999999997647235686258885057778886384132227999989989999969981-----8899
Q ss_pred HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHH---HHHH----HHHHC-----
Q ss_conf 99999999999877989999759887762344555332102332222056522301210---0124----55312-----
Q gi|255764471|r 70 KQMNDQTELAINEAHLILFLIDSKAGITPYDHAITSFLRKKNIPIIIVSNKMDTRIAQR---NFYE----IYSLD----- 137 (470)
Q Consensus 70 ~~i~~~~~~ai~~aD~il~vvD~~~g~~~~D~~i~~~lr~~~~~~ilv~NK~D~~~~~~---~~~e----~~~lg----- 137 (470)
T Consensus 77 ~~----~~~~l~~aD~ailvVda~~G~~~qt~~~~~~~~~~~~p~iv~iNKiD~~~~~~~~~~~~ei~~~l~~~~~~~~~ 152 (189)
T cd00881 77 SE----VIRGLSVSDGAILVVDANEGVQPQTREHLRIAREGGLPIIVAINKIDRVGEEDLEEVLREIKELLGLIGFISTK 152 (189)
T ss_pred HH----HHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 99----99998646856999987989987899999999976998799998971877562999999999998753210232
Q ss_pred --------CCCCEEEHHHCCCCCHHHHHHHHHHHHH
Q ss_conf --------2220100111022201479999998610
Q gi|255764471|r 138 --------FKEIVEISAEHDLGTSELHSVIFKIFKQ 165 (470)
Q Consensus 138 --------~~~~i~iSA~~g~Gi~~L~~~i~~~~~~ 165 (470)
T Consensus 153 ~~~~~~~~~~piv~iSA~~G~gv~~Lld~i~~~lP~ 188 (189)
T cd00881 153 EEGTRNGLLVPIVPGSALTGIGVEELLEAIVEHLPP 188 (189)
T ss_pred HHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 110125887759998886786979999999976879