>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.

Probab=100.00 E-value=8.1e-35 Score=253.58 Aligned_cols=164 Identities=24% Similarity=0.250 Sum_probs=63.2 Q ss_pred EEEEECCCCCHHHHHHHHHCCCC-CCCHHHHHHHHHCCCCEEEECCEEEEEEECHHCCC--CCCCCCHHHHHHCCCCCEE Q ss_conf 88640356425678876520121-10002456654202311420340699981711044--4443000111000121001 Q gi|255764471|r 206 IAVVGRPNVGKSTLINRLLGYNR-LLTGSQSGITRDSVSISWNWKNHPIEIFDTAGMRK--PSRITESLEQKTVKKSMQS 282 (470) Q Consensus 206 ~~~~G~pN~GKStl~N~l~~~~r-~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGirk--k~~~~~~~E~~s~~~t~~~ 282 (470) T Consensus 2 IaivG~pN~GKSTL~N~L~~~~~~~~vs~~~gtTr~i~--~~~~-~~~~~~vDtPG~g~~~~~~~~~~~~~~~~~~~l~~ 78 (170) T cd01876 2 IAFAGRSNVGKSSLINALTNRKKLARTSKTPGKTQLIN--FFNV-NDKFRLVDLPGYGYAKVSKEVKEKWGKLIEEYLEN 78 (170) T ss_pred EEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEE--EEEE-CCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 89998999999999999968996278607897785205--8853-87799996578401016877999999999999984 Q ss_pred EECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 20120599845532122021223200000035766558944223354155566654201333200488311123453334 Q gi|255764471|r 283 VRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTISGRTGE 362 (470) Q Consensus 283 i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~iSA~~g~ 362 (470) T Consensus 79 ~~~~~~vi~viD~~~~~~~~d~~i~~~l~~~~kp~iiVlNKiDlv~~~~~-~~~~~~~~~~l~~~~~~~~ii~iSA~~g~ 157 (170) T cd01876 79 RENLKGVVLLIDSRHGPTEIDLEMLDWLEELGIPFLVVLTKADKLKKSEL-AKALKEIKKELKLFEIDPPIILFSSLKGQ 157 (170) T ss_pred HHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHH-HHHHHHHHHHHHCCCCCCEEEEEECCCCC T ss_conf 06334999999632237486899999998769987999986753787789-99999999987421799839999889997 Q ss_pred CHHHHHHHHHH Q ss_conf 85899999999 Q gi|255764471|r 363 GLDDLMVSVLE 373 (470) Q Consensus 363 gi~~l~~~i~~ 373 (470) T Consensus 158 gi~~L~~~I~~ 168 (170) T cd01876 158 GIDELRALIEK 168 (170) T ss_pred CHHHHHHHHHH T ss_conf 79999999998

HHsearch alignment for GI: 255764471 and conserved domain: cd01876