HHsearch alignment for GI: 255764471 and conserved domain: cd01876
>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=100.00 E-value=2.2e-33 Score=243.87 Aligned_cols=157 Identities=27% Similarity=0.335 Sum_probs=120.0
Q ss_pred EEEEECCCCCCHHHHHHHHHCCC-EEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCC-CHHHHHHHH---HHHHHH
Q ss_conf 89997189887888999985885-0102589853022389999989989999965884207-636899999---999999
Q gi|255764471|r 4 TIAIVGAPNVGKSTLFNRLVKKK-MAVVGNHPGITRDRLYGQAIINGVIFNIVDTAGIADG-KNCSIAKQM---NDQTEL 78 (470)
Q Consensus 4 ~iaivG~pNvGKStL~N~l~~~~-~aiv~~~~g~Trd~~~~~~~~~~~~~~liDT~G~~~~-~~~~~~~~i---~~~~~~ 78 (470)
T Consensus 1 eIaivG~pN~GKSTL~N~L~~~~~~~~vs~~~gtTr~i~~~~--~-~~~~~~vDtPG~g~~~~~~~~~~~~~~~~~~~l~ 77 (170)
T cd01876 1 EIAFAGRSNVGKSSLINALTNRKKLARTSKTPGKTQLINFFN--V-NDKFRLVDLPGYGYAKVSKEVKEKWGKLIEEYLE 77 (170)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEE--E-CCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 989998999999999999968996278607897785205885--3-8779999657840101687799999999999998
Q ss_pred HHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHH---HHHH-HH----CCCCCEEEHHHCCC
Q ss_conf 9987798999975988776234455533210233222205652230121001---2455-31----22220100111022
Q gi|255764471|r 79 AINEAHLILFLIDSKAGITPYDHAITSFLRKKNIPIIIVSNKMDTRIAQRNF---YEIY-SL----DFKEIVEISAEHDL 150 (470)
Q Consensus 79 ai~~aD~il~vvD~~~g~~~~D~~i~~~lr~~~~~~ilv~NK~D~~~~~~~~---~e~~-~l----g~~~~i~iSA~~g~ 150 (470)
T Consensus 78 ~~~~~~~vi~viD~~~~~~~~d~~i~~~l~~~~kp~iiVlNKiDlv~~~~~~~~~~~~~~~l~~~~~~~~ii~iSA~~g~ 157 (170)
T cd01876 78 NRENLKGVVLLIDSRHGPTEIDLEMLDWLEELGIPFLVVLTKADKLKKSELAKALKEIKKELKLFEIDPPIILFSSLKGQ 157 (170)
T ss_pred HHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 40633499999963223748689999999876998799998675378778999999999987421799839999889997
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 2014799999986
Q gi|255764471|r 151 GTSELHSVIFKIF 163 (470)
Q Consensus 151 Gi~~L~~~i~~~~ 163 (470)
T Consensus 158 gi~~L~~~I~~~L 170 (170)
T cd01876 158 GIDELRALIEKWL 170 (170)
T ss_pred CHHHHHHHHHHHC
T ss_conf 7999999999859