HHsearch alignment for GI: 255764471 and conserved domain: cd01879
>cd01879 FeoB Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=100.00 E-value=1.3e-33 Score=245.36 Aligned_cols=158 Identities=28% Similarity=0.345 Sum_probs=122.3
Q ss_pred EEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCCCCCEEEECCE
Q ss_conf 64035642567887652012110002456654202311420340699981711044444300011100012100120120
Q gi|255764471|r 208 VVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVKKSMQSVRTCE 287 (470)
Q Consensus 208 ~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~~t~~~i~~ad 287 (470)
T Consensus 1 ivG~pNvGKSTL~N~L~g~-~~~vs~~pgtTrd~~~~~~~~~~~~~~lvDtpGi~~~~~~-~~~e~i--~~~~~~~~~~d 76 (158)
T cd01879 1 LVGNPNVGKTTLFNALTGA-RQKVGNWPGVTVEKKEGRFKLGGKEIEIVDLPGTYSLSPY-SEDEKV--ARDFLLGEKPD 76 (158)
T ss_pred CCCCCCCCHHHHHHHHHCC-CCEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCC-CHHHHH--HHHHHHHCCCC
T ss_conf 9798988899999999599-8646178982763478899629937999979874125641-356789--99999851787
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 59984553212202122320000003576655894422335415556665420133320048831112345333485899
Q gi|255764471|r 288 TTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTISGRTGEGLDDL 367 (470)
Q Consensus 288 vvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~iSA~~g~gi~~l 367 (470)
T Consensus 77 ~vl~vvD~~~--~~~~l~~~~~l~~~~~p~ivV~NK~D~~~~~~~~~--~~~~l~~~~----~~~ii~iSA~~g~Gi~~L 148 (158)
T cd01879 77 LIVNVVDATN--LERNLYLTLQLLELGLPVVVALNMIDEAEKRGIKI--DLDKLSELL----GVPVVPTSARKGEGIDEL 148 (158)
T ss_pred CEEEEEECCH--HHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHH--HHHHHHHHC----CCCEEEEECCCCCCHHHH
T ss_conf 1799977740--67768999999865998899940277655225466--799999871----994899987789799999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q gi|255764471|r 368 MVSVLEINKL 377 (470)
Q Consensus 368 ~~~i~~~~~~ 377 (470)
T Consensus 149 ~~~i~el~~k 158 (158)
T cd01879 149 KDAIAELAEK 158 (158)
T ss_pred HHHHHHHHCC
T ss_conf 9999998675