HHsearch alignment for GI: 255764471 and conserved domain: cd01881

>cd01881 Obg_like The Obg-like subfamily consists of five well-delimited, ancient subfamilies, namely Obg, DRG, YyaF/YchF, Ygr210, and NOG1. Four of these groups (Obg, DRG, YyaF/YchF, and Ygr210) are characterized by a distinct glycine-rich motif immediately following the Walker B motif (G3 box). Obg/CgtA is an essential gene that is involved in the initiation of sporulation and DNA replication in the bacteria Caulobacter and Bacillus, but its exact molecular role is unknown. Furthermore, several OBG family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. Nog1 is a nucleolar protein that might function in ribosome assembly. The DRG and Nog1 subfamilies are ubiquitous in archaea and eukaryotes, the Ygr210 subfamily is present in archaea and fungi, and the Obg and YyaF/YchF subfamilies are ubiquitous in bacteria and eukaryotes. The Obg/Nog1 and DRG subfamilies appear to
Probab=99.97  E-value=9.1e-31  Score=226.28  Aligned_cols=153  Identities=30%  Similarity=0.347  Sum_probs=98.4

Q ss_pred             EECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEC-CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCE
Q ss_conf             971898878889999858850102589853022389999989-9899999658842076368999999999999987798
Q gi|255764471|r    7 IVGAPNVGKSTLFNRLVKKKMAVVGNHPGITRDRLYGQAIIN-GVIFNIVDTAGIADGKNCSIAKQMNDQTELAINEAHL   85 (470)
Q Consensus         7 ivG~pNvGKStL~N~l~~~~~aiv~~~~g~Trd~~~~~~~~~-~~~~~liDT~G~~~~~~~~~~~~i~~~~~~ai~~aD~   85 (470)
T Consensus         1 ivG~PNvGKSTL~N~Lt~~~~-~v~~~pgTTr~~~~g~~~~~~~~~i~~~DtpGi~~~~~~--~~~~~~~~l~~~~~~d~   77 (176)
T cd01881           1 LVGLPNVGKSTLLNALTNAKP-KVANYPFTTLEPNLGVVEVPDGARIQVADIPGLIEGASE--GRGLGNQFLAHIRRADA   77 (176)
T ss_pred             CCCCCCCCHHHHHHHHHCCCC-EEECCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCHH--HHHHHHHHHHHHHCCCE
T ss_conf             969998889999999968996-030789967612467999479966999957875457337--87899999987410889


Q ss_pred             EEEEECCCCCCCHHHHHHH-------HHH----------HCCCCCCCCCHHHHCCCHHHHHHH----HHHHHCCCCCEEE
Q ss_conf             9999759887762344555-------332----------102332222056522301210012----4553122220100
Q gi|255764471|r   86 ILFLIDSKAGITPYDHAIT-------SFL----------RKKNIPIIIVSNKMDTRIAQRNFY----EIYSLDFKEIVEI  144 (470)
Q Consensus        86 il~vvD~~~g~~~~D~~i~-------~~l----------r~~~~~~ilv~NK~D~~~~~~~~~----e~~~lg~~~~i~i  144 (470)
T Consensus        78 il~vvD~~~~~~~~~~~~~~~~~~i~~el~~~~~~~~~~~~~~kp~i~v~NK~Dl~~~~~~~~~~~~~~~~~~~~~ii~i  157 (176)
T cd01881          78 ILHVVDASEDDDIGGVDPLEDYEILNAELKLYDLETILGLLTAKPVIYVLNKIDLDDAEELEEELVRELALEEGAEVVPI  157 (176)
T ss_pred             EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECEECCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             99999898765545445899999999999971156655543269719999686034700315999999974689958999


Q ss_pred             HHHCCCCCHHHHHHHHHH
Q ss_conf             111022201479999998
Q gi|255764471|r  145 SAEHDLGTSELHSVIFKI  162 (470)
Q Consensus       145 SA~~g~Gi~~L~~~i~~~  162 (470)
T Consensus       158 SA~~~~gi~~L~~~i~~~  175 (176)
T cd01881         158 SAKTEEGLDELIRAIYEL  175 (176)
T ss_pred             ECCCCCCHHHHHHHHHHH
T ss_conf             777887999999999965