HHsearch alignment for GI: 255764471 and conserved domain: cd01892

>cd01892 Miro2 Miro2 subfamily. Miro (mitochondrial Rho) proteins have tandem GTP-binding domains separated by a linker region containing putative calcium-binding EF hand motifs. Genes encoding Miro-like proteins were found in several eukaryotic organisms. This CD represents the putative GTPase domain in the C terminus of Miro proteins. These atypical Rho GTPases have roles in mitochondrial homeostasis and apoptosis. Most Rho proteins contain a lipid modification site at the C-terminus; however, Miro is one of few Rho subfamilies that lack this feature.
Probab=99.59  E-value=4.3e-14  Score=113.91  Aligned_cols=151  Identities=15%  Similarity=0.219  Sum_probs=102.2

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEE--EEEEECCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             50899971898878889999858850102589853022389999989989--9999658842076368999999999999
Q gi|255764471|r    2 IYTIAIVGAPNVGKSTLFNRLVKKKMAVVGNHPGITRDRLYGQAIINGVI--FNIVDTAGIADGKNCSIAKQMNDQTELA   79 (470)
Q Consensus         2 ~~~iaivG~pNvGKStL~N~l~~~~~aiv~~~~g~Trd~~~~~~~~~~~~--~~liDT~G~~~~~~~~~~~~i~~~~~~a   79 (470)
T Consensus         4 vfk~~VlG~~~VGKTsLi~rf~~~~f~~~~y~~Ti~~~~~~k~v~v~g~~~~L~i~Dt~g~e~~------~~l---~~~~   74 (169)
T cd01892           4 VFLCFVLGAKGSGKSALLRAFLGRSFSLNAYSPTIKPRYAVNTVEVYGQEKYLILREVGEDEVA------ILL---NDAE   74 (169)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEECCCCHHH------HHH---HHHH
T ss_conf             8999999999988999999996499986665675466189999998999999999855653235------566---5887


Q ss_pred             HHHCCEEEEEECCCCCCCHHHHHHHHHHHC----CCCCCCCCHHHHCCCHHHHH----HHHHH-HHCCCCCEEEHHHCCC
Q ss_conf             987798999975988776234455533210----23322220565223012100----12455-3122220100111022
Q gi|255764471|r   80 INEAHLILFLIDSKAGITPYDHAITSFLRK----KNIPIIIVSNKMDTRIAQRN----FYEIY-SLDFKEIVEISAEHDL  150 (470)
Q Consensus        80 i~~aD~il~vvD~~~g~~~~D~~i~~~lr~----~~~~~ilv~NK~D~~~~~~~----~~e~~-~lg~~~~i~iSA~~g~  150 (470)
T Consensus        75 ~~~ad~~ilVyDit~~~-SF-~~i~~~~~~~~~~~~iP~vlVgNK~DL~~~rqV~~~e~~~~a~~~~~~~~~e~SAktg~  152 (169)
T cd01892          75 LAACDVACLVYDSSDPK-SF-SYCAEVYKKYFMLGEIPCLFVAAKADLDEQQQRYEVQPDEFCRKLGLPPPLHFSSKLGD  152 (169)
T ss_pred             HCCCCEEEEEEECCCHH-HH-HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf             54698899999799878-99-99999999700568981899988655420375467769999998399966699832798


Q ss_pred             CCHHHHHHHHHHH
Q ss_conf             2014799999986
Q gi|255764471|r  151 GTSELHSVIFKIF  163 (470)
Q Consensus       151 Gi~~L~~~i~~~~  163 (470)
T Consensus       153 nv~~~F~~la~~a  165 (169)
T cd01892         153 SSNELFTKLATAA  165 (169)
T ss_pred             CHHHHHHHHHHHH
T ss_conf             9899999999997