HHsearch alignment for GI: 255764471 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=100.00 E-value=5.6e-45 Score=322.11 Aligned_cols=174 Identities=33% Similarity=0.664 Sum_probs=165.0
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 43038864035642567887652012110002456654202311420340699981711044444300011100012100
Q gi|255764471|r 202 KPLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVKKSMQ 281 (470)
Q Consensus 202 ~~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~~t~~ 281 (470)
T Consensus 1 ~~~~V~ivG~pN~GKSTL~N~l~g~~~~~vs~~pgtTr~~~~~~~~~~~~~~~~vDtpGi~~~~~~~~~~e~~~~~~~~~ 80 (174)
T cd01895 1 DPIRIAIIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDSIDVPFEYDGKKYTLIDTAGIRRKGKVEEGIEKYSVLRTLK 80 (174)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCEEECCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99899999899998999999983898444349999157332899999998899985788421344210688999999999
Q ss_pred EEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12012059984553212202122320000003576655894422335415556665420133320048831112345333
Q gi|255764471|r 282 SVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTISGRTG 361 (470)
Q Consensus 282 ~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~iSA~~g 361 (470)
T Consensus 81 ~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~ii~iSA~~g 160 (174)
T cd01895 81 AIERADVVLLVIDATEGITEQDLRIAGLILEEGKALVIVVNKWDLVEKDSKTMKEFKKEIRRKLPFLDYAPIVFISALTG 160 (174)
T ss_pred HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
T ss_conf 99842865899758989988999999999985998699985675267647789999999998734168992899974479
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 48589999999999
Q gi|255764471|r 362 EGLDDLMVSVLEIN 375 (470)
Q Consensus 362 ~gi~~l~~~i~~~~ 375 (470)
T Consensus 161 ~Gi~~L~~~I~ei~ 174 (174)
T cd01895 161 QGVDKLFDAIDEVY 174 (174)
T ss_pred CCHHHHHHHHHHHC
T ss_conf 89999999999869