HHsearch alignment for GI: 255764471 and conserved domain: cd01896

>cd01896 DRG The developmentally regulated GTP-binding protein (DRG) subfamily is an uncharacterized member of the Obg family, an evolutionary branch of GTPase superfamily proteins. GTPases act as molecular switches regulating diverse cellular processes. DRG2 and DRG1 comprise the DRG subfamily in eukaryotes. In view of their widespread expression in various tissues and high conservation among distantly related species in eukaryotes and archaea, DRG proteins may regulate fundamental cellular processes. It is proposed that the DRG subfamily proteins play their physiological roles through RNA binding.
Probab=99.95  E-value=9.7e-28  Score=205.87  Aligned_cols=155  Identities=24%  Similarity=0.319  Sum_probs=115.9

Q ss_pred             EEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf             38864035642567887652012110002456654202311420340699981711044444300011100012100120
Q gi|255764471|r  205 RIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVKKSMQSVR  284 (470)
Q Consensus       205 ~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~~t~~~i~  284 (470)
T Consensus         2 ~V~LVG~PN~GKSTLln~LT~a~-~~v~~ypfTT~~pi~g~~~~~~~~iqlvDtPGli~~a~~g~g~g----~~~l~~~r   76 (233)
T cd01896           2 RVALVGFPSVGKSTLLSKLTNTK-SEVAAYEFTTLTCVPGVLEYKGAKIQLLDLPGIIEGAADGKGRG----RQVIAVAR   76 (233)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCC-CCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHH----HHHHHHHH
T ss_conf             59999999999999999997899-54369897875747779998998999996730024633332068----99999987


Q ss_pred             CCEEEEEECCCCCCCHHHHH------------------------------------------HHHHHHH-C---------
Q ss_conf             12059984553212202122------------------------------------------3200000-0---------
Q gi|255764471|r  285 TCETTIVLLDATIPFEKQDL------------------------------------------RIVDSVF-N---------  312 (470)
Q Consensus       285 ~advvi~viDa~~~~~~qd~------------------------------------------~i~~~i~-~---------  312 (470)
T Consensus        77 ~aD~il~VvD~~~~~~~~~~i~~eLe~~gi~l~~~~~~v~i~~~~~~gi~i~~~~~~~~~~~~~v~~il~e~~i~~a~v~  156 (233)
T cd01896          77 TADLILMVLDATKPEGHREILERELEGVGIRLNKRPPNITIKKKKKGGINITSTVPLTKLDEKTIKAILREYKIHNADVL  156 (233)
T ss_pred             HCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             58999999847982667899999998605110357876257771358678604566666888999999998276764378


Q ss_pred             ------------------CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             ------------------35766558944223354155566654201333200488311123453334858999999999
Q gi|255764471|r  313 ------------------TGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTISGRTGEGLDDLMVSVLEI  374 (470)
Q Consensus       313 ------------------~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~iSA~~g~gi~~l~~~i~~~  374 (470)
T Consensus       157 i~~~~t~dd~~d~i~~n~~y~P~i~V~NKiDl~~~ee--~~~~----~------~~~~~i~ISA~~g~gld~L~~~I~~~  224 (233)
T cd01896         157 IREDITVDDLIDVIEGNRVYIPCLYVYNKIDLISIEE--LDLL----A------RQPNSVVISAEKGLNLDELKERIWDK  224 (233)
T ss_pred             ECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHH--HHHH----H------CCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             6057888898998735767673799997403699899--9986----4------67985999888898989999999998


Q ss_pred             HH
Q ss_conf             99
Q gi|255764471|r  375 NK  376 (470)
Q Consensus       375 ~~  376 (470)
T Consensus       225 L~  226 (233)
T cd01896         225 LG  226 (233)
T ss_pred             HC
T ss_conf             39