HHsearch alignment for GI: 255764471 and conserved domain: cd04101

>cd04101 RabL4 RabL4 (Rab-like4) subfamily. RabL4s are novel proteins that have high sequence similarity with Rab family members, but display features that are distinct from Rabs, and have been termed Rab-like. As in other Rab-like proteins, RabL4 lacks a prenylation site at the C-terminus. The specific function of RabL4 remains unknown.
Probab=99.66  E-value=3.7e-16  Score=127.84  Aligned_cols=156  Identities=21%  Similarity=0.200  Sum_probs=96.6

Q ss_pred             EEEEEEECCCCCHHHHHHHHHCCCCCCCHHH-HHHHHHCCCCEEEE-CCE--EEEEEECHHCCCCCCCCCHHHHHHCCCC
Q ss_conf             0388640356425678876520121100024-56654202311420-340--6999817110444443000111000121
Q gi|255764471|r  204 LRIAVVGRPNVGKSTLINRLLGYNRLLTGSQ-SGITRDSVSISWNW-KNH--PIEIFDTAGMRKPSRITESLEQKTVKKS  279 (470)
Q Consensus       204 i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~-~GtTrD~i~~~~~~-~~~--~~~liDTaGirkk~~~~~~~E~~s~~~t  279 (470)
T Consensus         1 iKivllGd~gVGKTsli~r~~~~~~~f~~~y~~Tig~~~~~k~~~~~~~~~i~l~iwDtaG~----------e~~~~l-~   69 (164)
T cd04101           1 LRCAVVGDPAVGKTAFVQMFHSNGAVFPKNYLMTTGCDFVVKEVPVDTDNTVELFIFDSAGQ----------ELYSDM-V   69 (164)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCC----------CCHHHH-H
T ss_conf             99999995995889999999978886688888864578899999978997999999979998----------400678-9


Q ss_pred             CEEEECCEEEEEECCCCCCCHHHHH-HHHHHHHC--CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             0012012059984553212202122-32000000--35766558944223354155566654201333200488311123
Q gi|255764471|r  280 MQSVRTCETTIVLLDATIPFEKQDL-RIVDSVFN--TGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTI  356 (470)
Q Consensus       280 ~~~i~~advvi~viDa~~~~~~qd~-~i~~~i~~--~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~i  356 (470)
T Consensus        70 ~~~~~~a~~~ilvydit~~~Sf~~~~~w~~~i~~~~~~~p~ilVgNK~DL~~~r~V~~~e~~~-----~a~~~~~~~~E~  144 (164)
T cd04101          70 SNYWESPSVFILVYDVSNKASFENCSRWVNKVRTASKHMPGVLVGNKMDLADKAEVTDAQAQA-----FAQANQLKFFKT  144 (164)
T ss_pred             HHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHH-----HHHHCCCEEEEE
T ss_conf             999764268999970774668999999999999766898689998722445245569999999-----999889989998


Q ss_pred             CCCCCCCHHHHHHHHHHHH
Q ss_conf             4533348589999999999
Q gi|255764471|r  357 SGRTGEGLDDLMVSVLEIN  375 (470)
Q Consensus       357 SA~~g~gi~~l~~~i~~~~  375 (470)
T Consensus       145 SAk~g~nV~e~F~~lar~~  163 (164)
T cd04101         145 SALRGVGYEEPFESLARAF  163 (164)
T ss_pred             CCCCCCCHHHHHHHHHHHH
T ss_conf             6688909899999999986