HHsearch alignment for GI: 255764471 and conserved domain: cd04129
>cd04129 Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that plays a role in cell morphogenesis, control of cell wall integrity, control of growth polarity, and maintenance of growth direction. Rho2 activates the protein kinase C homolog Pck2, and Pck2 controls Mok1, the major (1-3) alpha-D-glucan synthase. Together with Rho1 (RhoA), Rho2 regulates the construction of the cell wall. Unlike Rho1, Rho2 is not an essential protein, but its overexpression is lethal. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for proper intracellular localization via membrane attachment. As with other Rho family GTPases, the GDP/GTP cycling is regulated by GEFs (guanine nucleotide exchange factors), GAPs (GTPase-activating proteins) and GDIs (guanine nucleotide dissociation inhibitors).
Probab=99.58 E-value=1.1e-14 Score=117.98 Aligned_cols=161 Identities=19% Similarity=0.241 Sum_probs=97.8
Q ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 0388640356425678876520121100024566542023114203406--99981711044444300011100012100
Q gi|255764471|r 204 LRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKSMQ 281 (470)
Q Consensus 204 i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t~~ 281 (470)
T Consensus 2 ~KivllGd~~VGKTsLi~r~~~~~f--~~~y~pTi~~~~~~~i~v~~~~v~l~iwDTaG----------~e~~~~~~~~- 68 (187)
T cd04129 2 RKLVIVGDGACGKTSLLSVFTLGEF--PEEYHPTVFENYVTDCRVDGKPVQLALWDTAG----------QEEYERLRPL- 68 (187)
T ss_pred EEEEEECCCCCCHHHHHHHHHHCCC--CCCCCCCEEEEEEEEEEECCEEEEEEEEECCC----------CCCCCCCCCC-
T ss_conf 1999999899768999999982989--99878866789899999999999999997888----------7034546041-
Q ss_pred EEECCEEEEEECCCCCCCHHHHH--HHHHHHHC--CCCCCCEEEECCCCCCCHHHH-----HHHHHHHCCCCCCC-CCCC
Q ss_conf 12012059984553212202122--32000000--357665589442233541555-----66654201333200-4883
Q gi|255764471|r 282 SVRTCETTIVLLDATIPFEKQDL--RIVDSVFN--TGHAVVLALNKWDMVSDKLNL-----LQDLRTKAIKNLPQ-IGDI 351 (470)
Q Consensus 282 ~i~~advvi~viDa~~~~~~qd~--~i~~~i~~--~~k~~iiv~NK~Dli~~~~~~-----~~~~~~~~~~~~~~-~~~~ 351 (470)
T Consensus 69 ~~~~a~~~ilvydi~~~~Sf~~~~~~w~~~~~~~~~~~piilVGnK~DL~~~~~~~~~~~~~r~V~~~~g~~~a~~~~~~ 148 (187)
T cd04129 69 SYSKAHVILIGFAVDTPDSLENVRTKWIEEVRRYCPNVPVILVGLKKDLRQDAVAKEEYRTQRFVPIQQGKRVAKEIGAK 148 (187)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCC
T ss_conf 23388589997026986679999999999999858799889998860011341121112231557899999999984997
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 11123453334858999999999998
Q gi|255764471|r 352 YINTISGRTGEGLDDLMVSVLEINKL 377 (470)
Q Consensus 352 ~i~~iSA~~g~gi~~l~~~i~~~~~~ 377 (470)
T Consensus 149 ~y~EtSAk~~~nV~e~F~~~~r~~l~ 174 (187)
T cd04129 149 KYMECSALTGEGVDDVFEAATRAALL 174 (187)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 89996889997989999999999975