HHsearch alignment for GI: 255764471 and conserved domain: cd04135
>cd04135 Tc10 TC10 subfamily. TC10 is a Rho family protein that has been shown to induce microspike formation and neurite outgrowth in vitro. Its expression changes dramatically after peripheral nerve injury, suggesting an important role in promoting axonal outgrowth and regeneration. TC10 regulates translocation of insulin-stimulated GLUT4 in adipocytes and has also been shown to bind directly to Golgi COPI coat proteins. GTP-bound TC10 in vitro can bind numerous potential effectors. Depending on its subcellular localization and distinct functional domains, TC10 can differentially regulate two types of filamentous actin in adipocytes. TC10 mRNAs are highly expressed in three types of mouse muscle tissues: leg skeletal muscle, cardiac muscle, and uterus; they were also present in brain, with higher levels in adults than in newborns. TC10 has also been shown to play a role in regulating the expression of cystic fibrosis transmembrane conductance regulator (CFTR) through interacti
Probab=99.60 E-value=2.7e-15 Score=122.06 Aligned_cols=158 Identities=19% Similarity=0.212 Sum_probs=97.0
Q ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 0388640356425678876520121100024566542023114203406--99981711044444300011100012100
Q gi|255764471|r 204 LRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKSMQ 281 (470)
Q Consensus 204 i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t~~ 281 (470)
T Consensus 1 ~Kiv~vGd~~VGKTsli~rf~~~~-f~-~~y~pTi~~~~~~~i~v~~~~~~l~i~DTaG----------~e~~~~~~~-~ 67 (174)
T cd04135 1 LKCVVVGDGAVGKTCLLMSYANDA-FP-EEYVPTVFDHYAVSVTVGGKQYLLGLYDTAG----------QEDYDRLRP-L 67 (174)
T ss_pred CEEEEECCCCCCHHHHHHHHHHCC-CC-CCCCCEEEEEEEEEEEECCEEEEEEEEECCC----------CCCCHHHHH-H
T ss_conf 989999989985999999996298-99-8868857520227999999999999997976----------403155659-9
Q ss_pred EEECCEEEEEECCCCCCCHHHHH--HHHHHHHC--CCCCCCEEEECCCCCCCHHHH-------HHHHHHHCCCCCC-CCC
Q ss_conf 12012059984553212202122--32000000--357665589442233541555-------6665420133320-048
Q gi|255764471|r 282 SVRTCETTIVLLDATIPFEKQDL--RIVDSVFN--TGHAVVLALNKWDMVSDKLNL-------LQDLRTKAIKNLP-QIG 349 (470)
Q Consensus 282 ~i~~advvi~viDa~~~~~~qd~--~i~~~i~~--~~k~~iiv~NK~Dli~~~~~~-------~~~~~~~~~~~~~-~~~ 349 (470)
T Consensus 68 ~~~~a~~~ilvydi~~~~Sf~~~~~~w~~~~~~~~~~~piilvgnK~DL~~~~~~~~~~~~~~~r~Vs~eeg~~~A~~~g 147 (174)
T cd04135 68 SYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPYLLVGTQIDLRDDPKTLARLNDMKEKPVTVEQGQKLAKEIG 147 (174)
T ss_pred HHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf 85578767898437977889999999999999868499889996852300443455453004576639999999999779
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8311123453334858999999999
Q gi|255764471|r 350 DIYINTISGRTGEGLDDLMVSVLEI 374 (470)
Q Consensus 350 ~~~i~~iSA~~g~gi~~l~~~i~~~ 374 (470)
T Consensus 148 ~~~f~E~SAkt~~nV~e~F~~~i~~ 172 (174)
T cd04135 148 AHCYVECSALTQKGLKTVFDEAILA 172 (174)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 9899990548794989999999999