HHsearch alignment for GI: 255764471 and conserved domain: cd04145
>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=99.67 E-value=1.8e-16 Score=129.88 Aligned_cols=155 Identities=19% Similarity=0.218 Sum_probs=98.3
Q ss_pred CEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCCC
Q ss_conf 30388640356425678876520121100024566542023114203406--9998171104444430001110001210
Q gi|255764471|r 203 PLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKSM 280 (470)
Q Consensus 203 ~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t~ 280 (470)
T Consensus 2 t~Kiv~lGd~~VGKTsli~r~~~~~-f-~~~y~~Ti~~~~~k~~~~~~~~~~l~iwDtaG----------~e~~~~~~-~ 68 (164)
T cd04145 2 TYKLVVVGGGGVGKSALTIQFIQSY-F-VTDYDPTIEDSYTKQCEIDGQWAILDILDTAG----------QEEFSAMR-E 68 (164)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCC-C-CCCCCCCEEEEEEEEEEECCEEEEEEEEECCC----------CCCCCHHH-H
T ss_conf 3799999999978899999998098-9-87567841358999999999999999998988----------60312567-9
Q ss_pred EEEECCEEEEEECCCCCCCHHHHH-HHHHHHH----CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 012012059984553212202122-3200000----03576655894422335415556665420133320048831112
Q gi|255764471|r 281 QSVRTCETTIVLLDATIPFEKQDL-RIVDSVF----NTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINT 355 (470)
Q Consensus 281 ~~i~~advvi~viDa~~~~~~qd~-~i~~~i~----~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 355 (470)
T Consensus 69 ~~~~~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilVgNK~DL~~~r~Vs~~e~~~~a-~~----~~~~~~E 143 (164)
T cd04145 69 QYMRTGEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFPMILVGNKADLEHQRKVSREEGQELA-RK----LKIPYIE 143 (164)
T ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHH-HH----CCCEEEE
T ss_conf 873467874689856735439999999999998618877752653034573540889999999999-98----1998999
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q ss_conf 34533348589999999999
Q gi|255764471|r 356 ISGRTGEGLDDLMVSVLEIN 375 (470)
Q Consensus 356 iSA~~g~gi~~l~~~i~~~~ 375 (470)
T Consensus 144 ~SAk~~~nV~e~F~~l~~~I 163 (164)
T cd04145 144 TSAKDRLNVDKAFHDLVRVI 163 (164)
T ss_pred ECCCCCCCHHHHHHHHHHHH
T ss_conf 85486827799999999975