HHsearch alignment for GI: 255764471 and conserved domain: pfam03308

>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=99.18  E-value=2.2e-10  Score=88.96  Aligned_cols=175  Identities=21%  Similarity=0.239  Sum_probs=97.9

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHCC------CCCCC-----HHHHH---------------------------------
Q ss_conf             44303886403564256788765201------21100-----02456---------------------------------
Q gi|255764471|r  201 SKPLRIAVVGRPNVGKSTLINRLLGY------NRLLT-----GSQSG---------------------------------  236 (470)
Q Consensus       201 ~~~i~~~~~G~pN~GKStl~N~l~~~------~r~iv-----s~~~G---------------------------------  236 (470)
T Consensus        27 g~a~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlAvDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~~srg~lGGl  106 (267)
T pfam03308        27 GRAHRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLAVDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSSPSRGALGGL  106 (267)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf             99559987689988799999999999996898689999789998888630010777765058998588645778888871


Q ss_pred             --HHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCCCCCEE-EECCEEEEEECCCCCCCHHHHHHHHHHHHCC
Q ss_conf             --6542023114203406999817110444443000111000121001-2012059984553212202122320000003
Q gi|255764471|r  237 --ITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVKKSMQS-VRTCETTIVLLDATIPFEKQDLRIVDSVFNT  313 (470)
Q Consensus       237 --tTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~~t~~~-i~~advvi~viDa~~~~~~qd~~i~~~i~~~  313 (470)
T Consensus       107 s~~t~~~i~-lleaaGfD~IivETVGV---------------GQsE~~v~~~aD~~llv~~Pg~GDeiQ~iK--aGImE-  167 (267)
T pfam03308       107 SRATREAIL-LLDAAGFDVIIIETVGV---------------GQSEVDIANMADTFVLVTIPGGGDDLQGIK--AGLME-  167 (267)
T ss_pred             CHHHHHHHH-HHHHCCCCEEEEECCCC---------------CCCCHHHHHHCCEEEEEECCCCCHHHHHHH--HHHHH-
T ss_conf             476999999-99977999999924777---------------753035554157689995588760888987--53765-


Q ss_pred             CCCCCEEEECCCCCCCHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-----CCHHH
Q ss_conf             5766558944223354155566654201333--2004883111234533348589999999999984146-----89789
Q gi|255764471|r  314 GHAVVLALNKWDMVSDKLNLLQDLRTKAIKN--LPQIGDIYINTISGRTGEGLDDLMVSVLEINKLWKTR-----ITTSY  386 (470)
Q Consensus       314 ~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~--~~~~~~~~i~~iSA~~g~gi~~l~~~i~~~~~~~~~r-----i~T~~  386 (470)
T Consensus       168 -iaDi~vVNKaD~~~-A~~~~~~l~~~l~l~~~~~~~W~p~Vl~tSA~~g~Gi~el~~~I~~~~~~l~~sG~l~~rR~~q  245 (267)
T pfam03308       168 -IADIYVVNKADLPG-AERTARELRSALHLLTPKEAGWRPPVLTTSAVTGEGIDELWDAIEEHREFLTATGLLAARRRAR  245 (267)
T ss_pred             -HCCEEEEECCCHHH-HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf             -35489996676476-9999999999985179877899999899874788999999999999999999788699999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             8999999998
Q gi|255764471|r  387 LNSWLQKTQL  396 (470)
Q Consensus       387 LN~~l~~~~~  396 (470)
T Consensus       246 ~~~w~~~~I~  255 (267)
T pfam03308       246 IEEWLKTLVE  255 (267)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999999