HHsearch alignment for GI: 255764471 and conserved domain: smart00178
>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases. Yeast SAR1 is an essential gene required for transport of secretory proteins from the endoplasmic reticulum to the Golgi apparatus.
Probab=99.60 E-value=2.3e-14 Score=115.73 Aligned_cols=154 Identities=18% Similarity=0.115 Sum_probs=90.2
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCCCCC
Q ss_conf 44303886403564256788765201211000245665420231142034069998171104444430001110001210
Q gi|255764471|r 201 SKPLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVKKSM 280 (470)
Q Consensus 201 ~~~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~~t~ 280 (470)
T Consensus 15 ~ke~~ililGLd~aGKTTil~~lk~~~~~~~~PT~g~~~----e~~~~~~~~~~~wDlgG~~~~R~lW--~~Y------- 81 (184)
T smart00178 15 NKHAKILFLGLDNAGKTTLLHMLKNDRLAQHQPTQHPTS----EELAIGNIKFTTFDLGGHQQARRLW--KDY------- 81 (184)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCE----EEEEECCEEEEEEECCCCHHHHHHH--HHH-------
T ss_conf 661479999658898899999980699753057878864----8999999999999889877788999--988-------
Q ss_pred EEEECCEEEEEECCCCCC--CHHHHHH---HHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC-C------CCCC
Q ss_conf 012012059984553212--2021223---20000003576655894422335415556665420133-3------2004
Q gi|255764471|r 281 QSVRTCETTIVLLDATIP--FEKQDLR---IVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIK-N------LPQI 348 (470)
Q Consensus 281 ~~i~~advvi~viDa~~~--~~~qd~~---i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~-~------~~~~ 348 (470)
T Consensus 82 --y~~~~~iIfVVDssD~~r~~eak~~L~~ll~~~~l~~~PlLilaNKqDl~~a~~--~~ei~~~L~L~~~~~~~~~~~~ 157 (184)
T smart00178 82 --FPEVNGIVYLVDAYDKERFAESKRELDALLSDEELATVPFLILGNKIDAPYAAS--EDELRYALGLTNTTGSKGKVGV 157 (184)
T ss_pred --HCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC--HHHHHHHHCCHHHHCCCCCCCC
T ss_conf --216758999972686889999999999986467655970999997567778999--9999988195123265576677
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 88311123453334858999999
Q gi|255764471|r 349 GDIYINTISGRTGEGLDDLMVSV 371 (470)
Q Consensus 349 ~~~~i~~iSA~~g~gi~~l~~~i 371 (470)
T Consensus 158 r~~~i~~~SA~tG~Gl~egl~WL 180 (184)
T smart00178 158 RPLEVFMCSVVRRMGYGEGFKWL 180 (184)
T ss_pred CCEEEEEEECCCCCCHHHHHHHH
T ss_conf 63199973560797869999999