RPSBLAST alignment for GI: 255764471 and conserved domain: TIGR02768
>gnl|CDD|163008 TIGR02768, TraA_Ti, Ti-type conjugative transfer relaxase TraA. This protein contains domains distinctive of a single strand exonuclease (N-terminus, MobA/MobL, pfam03389) as well as a helicase domain (central region, homologous to the corresponding region of the F-type relaxase TraI, TIGR02760). This protein likely fills the same role as TraI(F), nicking (at the oriT site) and unwinding the coiled plasmid prior to conjugative transfer. Length = 744
Score = 38.6 bits (90), Expect = 0.003
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 28/121 (23%)
Query: 185 PKENITSEGKSSVKNISKPLRIA-VVGRPNVGKSTLIN------RLLGYNRL---LTG-- 232
++ E +V++++ IA VVGR GKST++ GY + L+G
Sbjct: 349 QHYRLSEEQYEAVRHVTGSGDIAVVVGRAGTGKSTMLKAAREAWEAAGYRVIGAALSGKA 408
Query: 233 -----SQSGIT-RDSVSISWNWKN-------HPIEIFDTAGM---RKPSRITESLEQKTV 276
++SGI R S+ + W N + + D AGM R+ +R+ + E+
Sbjct: 409 AEGLQAESGIESRTLASLEYAWANGRDLLSDKDVLVIDEAGMVGSRQMARVLKEAEEAGA 468
Query: 277 K 277
K
Sbjct: 469 K 469