HHsearch alignment for GI: 255764472 and conserved domain: COG1032
>COG1032 Fe-S oxidoreductase [Energy production and conversion].
Probab=99.95 E-value=3.1e-26 Score=215.54 Aligned_cols=331 Identities=23% Similarity=0.333 Sum_probs=216.2
Q ss_pred HHHHHHHHHHCCCEE------CCCC------------CCCCEEEEECCCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999999999879868------7760------------1088999927832-50799999999999998767664218981
Q gi|255764472|r 41 SLRMEDMFFSQGYER------VNSM------------DDADLIVLNTCHI-REKAAEKVYSFLGRIRNLKNSRIKEGGDL 101 (469)
Q Consensus 41 se~i~~~L~~~G~~~------~~~~------------~~ADviiINTCsV-~~~ae~k~~~~i~~~~~~~~~~~k~~p~~ 101 (469)
T Consensus 34 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~ 103 (490)
T COG1032 34 LRKLAAVLERAGKPNLFFDVVAGEPDSLENLLDALKKIRADLIGVSDPLGGLRPDALKL---VAKAR-------GRRDKP 103 (490)
T ss_pred HHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH---HHHHH-------CCCCCC
T ss_conf 89987788764775212300015775455445430352223899641210003146888---99873-------046898
Q ss_pred EEEEECCCCCCCHHHHHHHHCCCCCC-CCCHHHCCHHHHHHHHCCCCEE--------CCCCCCCC-CCC-----CCCCCC
Q ss_conf 89996473010878898741001100-1100111316888753059700--------23554411-244-----433333
Q gi|255764472|r 102 LVVVAGCVAQAEGEEILRRSPIVNVV-VGPQTYYRLPELLERARFGKRV--------VDTDYSVE-DKF-----ERLSIV 166 (469)
Q Consensus 102 ~IvVtGC~aq~~~e~l~~~~p~vd~v-ig~~~~~~i~~~i~~~~~g~~~--------~~~~~~~~-~~~-----~~~~~~ 166 (469)
T Consensus 104 ~v~~GG~~~t~~~~~~~~~~~-~D~iv~GeGE~~-~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (490)
T COG1032 104 LVVVGGPEATENPEPLLDFGP-ADIIVIGEGEET-LPELLEALEEGEDDPRVPGLALPSFEEIVYDQDLDDVPIPAYDLV 181 (490)
T ss_pred EEEECCCCCCCCHHHHHHHCC-CCEEEECCCHHH-HHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 799758566668899997568-888998973899-999999986057644567424335210113555455765541233
Q ss_pred C-------CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECC
Q ss_conf 4-------575677772578741233244681110012213764100588999887631013310587314541134113
Q gi|255764472|r 167 D-------GGYNRKRGVTAFLTIQEGCDKFCTFCVVPYTRGIEISRSLSQVVDEARKLIDNGVCEITLLGQNVNAWRGKG 239 (469)
Q Consensus 167 ~-------~~~~~~~~~~a~ikI~~GC~~~CsfC~ip~~RG~~rSr~~~~Iv~ei~~l~~~G~kEi~L~g~d~~~Y~g~~ 239 (469)
T Consensus 182 ~~~~~~~~p~~~~~~~~~~~ve~~RGCp~~C~FC~~~~~~-~~r~~~~~~v~~ei~~~~~~~~~~~~~~~~~~f~~~~~~ 260 (490)
T COG1032 182 DDHKRDDLPPYGAGENRAFSVETSRGCPRGCRFCSITKHF-KYRRRRPERVVEEIKELIEEGGKRVVFFVDDIFLYGSPA 260 (490)
T ss_pred CCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCEECCCEEECCCCC
T ss_conf 5444344782120577269999978888899888886114-600578899999999999987321450235577447854
Q ss_pred CCCCCCCCCHHHHHHHCCC--CCCCC--CCCCCCCCCCC-CHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCH
Q ss_conf 4443100021678862044--43001--35442100010-0036652022111220133211145789987303334411
Q gi|255764472|r 240 LDGEKCTFSDLLYSLSEIK--GLVRL--RYTTSHPRDMS-DCLIKAHGDLDVLMPYLHLPVQSGSDRILKSMNRRHTAYE 314 (469)
Q Consensus 240 ~~~~~~~l~~Ll~~l~~i~--~~~ri--R~~s~~P~~~~-~~li~~~~~~~~i~~~lhlpiQSgs~~vLk~M~R~~~~e~ 314 (469)
T Consensus 261 ~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~d~~~~~~~~~~~~~~g--~~~~~iG~Esgs~~~l~~~~k~~~~~~ 337 (490)
T COG1032 261 LN-DEKRFELLSLELIERGLRKGCRVHISAPSLRADTVTDEELLKLLREAG--LRRVYIGIESGSEELLKKINKGITTEE 337 (490)
T ss_pred CC-HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC--CEEEEEECCCCCHHHHHHHHCCCCHHH
T ss_conf 34-167888879999986304676035752300334378799999987649--436999658999999998614788688
Q ss_pred HHH-HHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH---HHHHHHHHHH-HCCCHHEEECCCHHHHHCCCCCCHHHHHH
Q ss_conf 467-899987401344320000013522012478988---6332210111-00200001112012321436889899999
Q gi|255764472|r 315 YRQ-IIDRIRSVRPDIAISSDFIVGFPGETDDDFRAT---MDLVDKIGYA-QAFSFKYSPRLGTPGSNMLEQVDENVKAE 389 (469)
Q Consensus 315 ~~~-~i~~~r~~~p~~~i~tdiIvGfPgETeedf~~T---l~~i~~~~~~-~~~vf~yS~r~gT~Aa~m~~qV~~~vk~~ 389 (469)
T Consensus 338 ~~~~a~~~~~~~--~~~~~~~~i~G~pget~ed~~~t~~~~~~~~~~~~~~~~~~~~~~p~p~t~~~~~~-~~~~~~~~~ 414 (490)
T COG1032 338 VLEEAVKIAKEH--GLRVKLYFIVGLPGETEEDVKETIELAKFIKKLGPKLYVSPSPFVPLPGTPLQEMP-KLENELLKR 414 (490)
T ss_pred HHHHHHHHHHHC--CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCC-CCCCHHHHH
T ss_conf 899999999867--98617999982799997999999999999987186745887641646988413224-532012322
Q ss_pred H
Q ss_conf 9
Q gi|255764472|r 390 R 390 (469)
Q Consensus 390 R 390 (469)
T Consensus 415 ~ 415 (490)
T COG1032 415 R 415 (490)
T ss_pred H
T ss_conf 2