HHsearch alignment for GI: 255764472 and conserved domain: COG1180
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones].
Probab=97.28 E-value=0.018 Score=38.12 Aligned_cols=178 Identities=15% Similarity=0.219 Sum_probs=89.2
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHH
Q ss_conf 8741233244681110012213764100588----999887631013310587314541134113444310002167886
Q gi|255764472|r 179 FLTIQEGCDKFCTFCVVPYTRGIEISRSLSQ----VVDEARKLIDNGVCEITLLGQNVNAWRGKGLDGEKCTFSDLLYSL 254 (469)
Q Consensus 179 ~ikI~~GC~~~CsfC~ip~~RG~~rSr~~~~----Iv~ei~~l~~~G~kEi~L~g~d~~~Y~g~~~~~~~~~l~~Ll~~l 254 (469)
T Consensus 38 ~~vf~~GCnlrC~~C~N~~~~~~~~~~~~~~~~~e~l~~~~~~~-~~~~gvt~SG-------GEP~-~q~e~~~~~~~~a 108 (260)
T COG1180 38 LSVFLQGCNLRCPYCQNPEISQRGREVSGEEVSPEVLVDKAFYS-ESGGGVTFSG-------GEPT-LQAEFALDLLRAA 108 (260)
T ss_pred EEEEECCCCCCCCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHHC-CCCCEEEEEC-------CHHH-HHHHHHHHHHHHH
T ss_conf 99987898998998979467606565656457898999987431-6998899989-------6044-4399999999999
Q ss_pred HCCCCCCCC--CCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 204443001--354421000100036652022111220133211145789987303334411467899987401344320
Q gi|255764472|r 255 SEIKGLVRL--RYTTSHPRDMSDCLIKAHGDLDVLMPYLHLPVQSGSDRILKSMNRRHTAYEYRQIIDRIRSVRPDIAIS 332 (469)
Q Consensus 255 ~~i~~~~ri--R~~s~~P~~~~~~li~~~~~~~~i~~~lhlpiQSgs~~vLk~M~R~~~~e~~~~~i~~~r~~~p~~~i~ 332 (469)
T Consensus 109 ke~-Gl~~~l~TnG~~~~~~~-~~l~~~-------~D~v~~DlK~~~~~~yr~~t-g~~~~~vl~~~~~l~~~g~~ve~r 178 (260)
T COG1180 109 KER-GLHVALDTNGFLPPEAL-EELLPL-------LDAVLLDLKAFDDELYRKLT-GADNEPVLENLELLADLGVHVEIR 178 (260)
T ss_pred HHC-CCEEEEECCCCCCHHHH-HHHHHH-------CCCEEEECCCCCHHHHHHHH-CCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 987-99089976899882689-999974-------23148840668878889875-687168899999986179839998
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHCCC
Q ss_conf 000013522012478988633221011100200001112012321436
Q gi|255764472|r 333 SDFIVGFPGETDDDFRATMDLVDKIGYAQAFSFKYSPRLGTPGSNMLE 380 (469)
Q Consensus 333 tdiIvGfPgETeedf~~Tl~~i~~~~~~~~~vf~yS~r~gT~Aa~m~~ 380 (469)
T Consensus 179 ~lviPg~-~d~~e~i~~i~~~i~~~~----~~~p~~~l~fhp~~~~~~ 221 (260)
T COG1180 179 TLVIPGY-NDDEEEIRELAEFIADLG----PEIPIHLLRFHPDYKLKD 221 (260)
T ss_pred EEECCCC-CCCHHHHHHHHHHHHHCC----CCCCEEEECCCCCHHCCC
T ss_conf 8733898-899999999999997308----666558756687401135