HHsearch alignment for GI: 255764472 and conserved domain: TIGR01212
>TIGR01212 TIGR01212 radical SAM protein, TIGR01212 family; InterPro: IPR005911 This uncharacterised protein family shows significant similarity to IPR005910 from INTERPRO, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain..
Probab=99.63 E-value=2.1e-15 Score=134.74 Aligned_cols=185 Identities=22% Similarity=0.312 Sum_probs=142.3
Q ss_pred EEECCCCCCC--------CCCCCH---HHHHH---HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCC
Q ss_conf 7412332446--------811100---12213---764100588999887631013310587314541134113444310
Q gi|255764472|r 180 LTIQEGCDKF--------CTFCVV---PYTRG---IEISRSLSQVVDEARKLIDNGVCEITLLGQNVNAWRGKGLDGEKC 245 (469)
Q Consensus 180 ikI~~GC~~~--------CsfC~i---p~~RG---~~rSr~~~~Iv~ei~~l~~~G~kEi~L~g~d~~~Y~g~~~~~~~~ 245 (469)
T Consensus 22 ~~gGF~CPNRDGT~G~GGCtfC~~a~~~~f~~~~~~~~~~~~~~i~~~~~~~~k~G~kkf~-------aYFQ~yTn---- 90 (307)
T TIGR01212 22 LHGGFSCPNRDGTIGRGGCTFCNDASKPSFADEVTQARIPIKEQIKKRKKKYKKDGIKKFI-------AYFQAYTN---- 90 (307)
T ss_pred EECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE-------EEECCCCC----
T ss_conf 6457887788870025772521788888524510235446899999999765315731578-------99738876----
Q ss_pred CCC--HHHHHH----HCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC-CC-CCEEEEEECCCHHHHHHHCCCCCCCHHHH
Q ss_conf 002--167886----20444300135442100010003665202211-12-20133211145789987303334411467
Q gi|255764472|r 246 TFS--DLLYSL----SEIKGLVRLRYTTSHPRDMSDCLIKAHGDLDV-LM-PYLHLPVQSGSDRILKSMNRRHTAYEYRQ 317 (469)
Q Consensus 246 ~l~--~Ll~~l----~~i~~~~riR~~s~~P~~~~~~li~~~~~~~~-i~-~~lhlpiQSgs~~vLk~M~R~~~~e~~~~ 317 (469)
T Consensus 91 TYApve~Lk~~y~~aL~~~~vVGlsvg-TRPDC~P~~VLDlL~ey~~~GyevWvELGLQtah~~TL~~INRgHd~~~y~~ 169 (307)
T TIGR01212 91 TYAPVEVLKEMYEQALSEDDVVGLSVG-TRPDCVPDEVLDLLAEYKERGYEVWVELGLQTAHDRTLKKINRGHDFACYVD 169 (307)
T ss_pred CCHHHHHHHHHHHHHHHHCCEEEEEEC-CCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHH
T ss_conf 500268888999987632780577536-8898774789999999954975899960535655899998514378789999
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHC
Q ss_conf 8999874013443200000135220124789886332210111002000011120123214
Q gi|255764472|r 318 IIDRIRSVRPDIAISSDFIVGFPGETDDDFRATMDLVDKIGYAQAFSFKYSPRLGTPGSNM 378 (469)
Q Consensus 318 ~i~~~r~~~p~~~i~tdiIvGfPgETeedf~~Tl~~i~~~~~~~~~vf~yS~r~gT~Aa~m 378 (469)
T Consensus 170 a~~~~~kr--GikVC~H~I~GLPgE~~~~~~eTak~~~~l~vdGiKiH~LhvvkGt~m~k~ 228 (307)
T TIGR01212 170 AVKRARKR--GIKVCSHVILGLPGEDREEMLETAKIVASLDVDGIKIHPLHVVKGTKMAKQ 228 (307)
T ss_pred HHHHHHHC--CCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHH
T ss_conf 99999765--988999987428988888999999999837988488720178735757887