HHsearch alignment for GI: 255764472 and conserved domain: TIGR03279
>TIGR03279 cyano_FeS_chp putative FeS-containing Cyanobacterial-specific oxidoreductase. Members of this protein family are predicted FeS-containing oxidoreductases of unknown function, apparently restricted to and universal across the Cyanobacteria. The high trusted cutoff score for this model, 700 bits, excludes homologs from other lineages. This exclusion seems justified because a significant number of sequence positions are simultaneously unique to and invariant across the Cyanobacteria, suggesting a specialized, conserved function, perhaps related to photosynthesis. A distantly related protein family, TIGR03278, in universal in and restricted to archaeal methanogens, and may be linked to methanogenesis.
Probab=96.70 E-value=0.015 Score=38.81 Aligned_cols=133 Identities=14% Similarity=0.186 Sum_probs=79.2
Q ss_pred CCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH-HHHHH
Q ss_conf 10003665202211122013321114578998730333441146789998740134432000001352201247-89886
Q gi|255764472|r 273 MSDCLIKAHGDLDVLMPYLHLPVQSGSDRILKSMNRRHTAYEYRQIIDRIRSVRPDIAISSDFIVGFPGETDDD-FRATM 351 (469)
Q Consensus 273 ~~~~li~~~~~~~~i~~~lhlpiQSgs~~vLk~M~R~~~~e~~~~~i~~~r~~~p~~~i~tdiIvGfPgETeed-f~~Tl 351 (469)
T Consensus 126 l~e~D~~RIi~~-rLSP-l~ISVHaT~pelR~~mL~n~~ag~il~~l~~L~~~--gI~~h~Q-IVLCPGiNDG~~L~rTi 200 (433)
T TIGR03279 126 LPPAEWQRIEQL-RLSP-LYVSVHATEPSLRARLLKNPRAGLILEQLKWFQER--RLQLHAQ-VVVCPGINDGKHLERTL 200 (433)
T ss_pred CCHHHHHHHHHH-CCCC-EEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHC--CCEEEEE-EEECCCCCCHHHHHHHH
T ss_conf 998999999982-5786-38998639989999987699578999999999976--9879847-99879967669999899
Q ss_pred HHHHHHH---HH--------HCCCHHEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 3322101---11--------002000011120123214368898999999999999999999999998579789999842
Q gi|255764472|r 352 DLVDKIG---YA--------QAFSFKYSPRLGTPGSNMLEQVDENVKAERLLCLQKKLREQQVSFNDACVGQIIEVLIEK 420 (469)
Q Consensus 352 ~~i~~~~---~~--------~~~vf~yS~r~gT~Aa~m~~qV~~~vk~~R~~~l~~~~~~~~~~~~~~~iG~~~~Vlve~ 420 (469)
T Consensus 201 ~DL~~~~~~~~P~v~SvavVPVGlTk~--R~~l~--~l~-~~~~----e~A~~vi~~ve~~Q~~~~~~-~G~~fv~~sDE 270 (433)
T TIGR03279 201 RDLAQFHDGDWPTVLSVAVVPVGLTRF--RPEED--ELT-PVTP----ECARRVIAQVEALQTQFQRQ-LGSRFAWLADE 270 (433)
T ss_pred HHHHHHHCCCCCCEEEEEEEECCCCCC--CCCCC--CCC-CCCH----HHHHHHHHHHHHHHHHHHHH-HCCCEEEECHH
T ss_conf 999986124688425777883242135--78999--872-1899----99999999999999999998-09945960417