HHsearch alignment for GI: 255764472 and conserved domain: pfam00919
>pfam00919 UPF0004 Uncharacterized protein family UPF0004. This family is the N terminal half of the Prosite family. The C-terminal half has been shown to be related to MiaB proteins. This domain is a nearly always found in conjunction with pfam04055 and pfam01938 although its function is uncertain.
Probab=99.94 E-value=5.3e-27 Score=221.28 Aligned_cols=98 Identities=40% Similarity=0.715 Sum_probs=93.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 79999579856887899999999987986877601088999927832507999999999999987676642189818999
Q gi|255764472|r 26 RFFVKSYGCQMNVYDSLRMEDMFFSQGYERVNSMDDADLIVLNTCHIREKAAEKVYSFLGRIRNLKNSRIKEGGDLLVVV 105 (469)
Q Consensus 26 kv~i~TlGC~~N~~Dse~i~~~L~~~G~~~~~~~~~ADviiINTCsV~~~ae~k~~~~i~~~~~~~~~~~k~~p~~~IvV 105 (469)
T Consensus 1 kv~i~T~GC~~N~~Dse~i~~~l~~~G~~~~~~~~~AD~iiiNTC~V~~~A~~k~~~~i~~~~~~------~~p~~~iiv 74 (98)
T pfam00919 1 KVYIETLGCQMNQADSEIMAGLLKKAGYELVDDPEEADVVVVNTCAVREKAEQKSRQTIRRLKRL------KNPDAKIVV 74 (98)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCEECCCHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHH------CCCCCEEEE
T ss_conf 98999679987699999999999987898858710099899996131128999999999999984------299988999
Q ss_pred ECCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 647301087889874100110011
Q gi|255764472|r 106 AGCVAQAEGEEILRRSPIVNVVVG 129 (469)
Q Consensus 106 tGC~aq~~~e~l~~~~p~vd~vig 129 (469)
T Consensus 75 ~GC~aq~~~e~l~~~~p~VD~v~G 98 (98)
T pfam00919 75 TGCMAQRYPEELLKEIPEVDLVLG 98 (98)
T ss_pred EEECCCCCHHHHHHHCCCCCEEEC
T ss_conf 985031477999976899619969