HHsearch results for GI: 255764472 and protein with PDBid: 2qgq_A
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=100.00 E-value=0 Score=540.32 Aligned_cols=291 Identities=33% Similarity=0.536 Sum_probs=274.0
Q ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHH
Q ss_conf 72578741233244681110012213764100588999887631013310587314541134113444310002167886
Q gi|255764472|r 175 GVTAFLTIQEGCDKFCTFCVVPYTRGIEISRSLSQVVDEARKLIDNGVCEITLLGQNVNAWRGKGLDGEKCTFSDLLYSL 254 (469)
Q Consensus 175 ~~~a~ikI~~GC~~~CsfC~ip~~RG~~rSr~~~~Iv~ei~~l~~~G~kEi~L~g~d~~~Y~g~~~~~~~~~l~~Ll~~l 254 (469)
+++|||+||||||++||||++|++||++||||+++|++|++.+++.|++||+|+|+|++.| +.+.. ....+.+|+..+
T Consensus 3 ~~~A~i~isrGC~~~CsFC~ip~~rG~~rsr~~e~Ii~Ei~~l~~~G~kei~l~~~d~~~~-~~~~~-~~~~~~~L~~~~ 80 (304)
T 2qgq_A 3 RPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSY-GIDLY-RKQALPDLLRRL 80 (304)
T ss_dssp CSEEEEESBCCC-------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGT-THHHH-SSCCHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCEECEEEEEECCEEEECHHHHHHHHHHHHHCCCEEEEEEEECCCCC-CCCCC-CCHHHHHHHHHH
T ss_conf 8619989776989987755562014983771999999999999986990999985646655-54244-511489999987
Q ss_pred HCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 20444300135442100010003665202211122013321114578998730333441146789998740134432000
Q gi|255764472|r 255 SEIKGLVRLRYTTSHPRDMSDCLIKAHGDLDVLMPYLHLPVQSGSDRILKSMNRRHTAYEYRQIIDRIRSVRPDIAISSD 334 (469)
Q Consensus 255 ~~i~~~~riR~~s~~P~~~~~~li~~~~~~~~i~~~lhlpiQSgs~~vLk~M~R~~~~e~~~~~i~~~r~~~p~~~i~td 334 (469)
.+..+..|+|+++++|..+++++++++++.+++|+|+|+|+||||++||++|||+|+.+++.++++.+|+..|++.++||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~igieSgs~~vLk~m~r~~t~e~~~~~v~~ir~~~p~~~i~t~ 160 (304)
T 2qgq_A 81 NSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTS 160 (304)
T ss_dssp HTSSSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 23688358994035843677887776764484646774064327879998750476455544588767664899557635
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 00135220124789886332210111002000011120123214368898999999999999999999999998579789
Q gi|255764472|r 335 FIVGFPGETDDDFRATMDLVDKIGYAQAFSFKYSPRLGTPGSNMLEQVDENVKAERLLCLQKKLREQQVSFNDACVGQII 414 (469)
Q Consensus 335 iIvGfPgETeedf~~Tl~~i~~~~~~~~~vf~yS~r~gT~Aa~m~~qV~~~vk~~R~~~l~~~~~~~~~~~~~~~iG~~~ 414 (469)
|||||||||+|||++|++|+++++|+++|+|+|||||||||+.|++||++++|++|+++|++++.++..+++++++|+++
T Consensus 161 fIvGfPgET~edf~~T~~fl~~~~~d~~~i~~~sp~pGT~a~~~~~~v~~~~k~~r~~~l~~~~~~~~~~~~~~~~g~~~ 240 (304)
T 2qgq_A 161 IIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSRLDRFVGKKL 240 (304)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 75678987689999999999856978330024256699766663678997999999999999987654577898569299
Q ss_pred EEEEECCCCCCCEEEEECCCCCE----EEECCCCCCCCCEEEEEEEEEECCEEEEEEEC
Q ss_conf 99984256808689999878628----89738876768889999998308738999949
Q gi|255764472|r 415 EVLIEKHGKEKGKLVGRSPWLQS----VVLNSKNHNIGDIIKVRITDVKISTLYGELVV 469 (469)
Q Consensus 415 ~Vlve~~~~~~~~~~G~t~~~~~----V~~~~~~~~~G~~v~V~I~~~~~~~L~G~vi~ 469 (469)
+||+|+. +++.+.||+.+|.+ |++.++...+|++++|+|+++..++|+|++|.
T Consensus 241 ~vlve~~--~~~~~~Gr~~~~~p~~~~vv~~~~~~~~G~~v~v~I~~~~~~~L~G~~i~ 297 (304)
T 2qgq_A 241 KFLVEGK--EGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGSVIL 297 (304)
T ss_dssp EEEEEEE--ETTEEEEEETTCCTTTSCCEEEESCCCTTCEEEEEEEEEETTEEEEEEC-
T ss_pred EEEEEEC--CCCEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEE
T ss_conf 9999935--18999988888785563479608987899989999997625508999999