HHSEARCH alignment of GI: 255764472 and SCOP domain: d1yvca1

Alignment
>d1yvca1 b.40.4.12 (A:1-69) Hypothetical protein MMP0076 {Methanococcus maripaludis [TaxId: 39152]}
Probab=92.79  E-value=0.2  Score=26.93  Aligned_cols=55  Identities=35%  Similarity=0.449  Sum_probs=43.3

Q ss_pred             CCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEEEEEECCEEEEEEE
Q ss_conf             79789999842568086899998786288973887676888999999830873899994
Q gi|255764472|r  410 VGQIIEVLIEKHGKEKGKLVGRSPWLQSVVLNSKNHNIGDIIKVRITDVKISTLYGELV  468 (469)
Q Consensus       410 iG~~~~Vlve~~~~~~~~~~G~t~~~~~V~~~~~~~~~G~~v~V~I~~~~~~~L~G~vi  468 (469)
                      .|+++++-+|+.+ ..|.-+++.+  ..++|. ....+|+.+.++|+.....+..|++|
T Consensus        15 ~g~~~~v~I~~l~-~~G~Giar~~--g~vvfV-~~alPGe~V~v~I~k~kk~~~~a~~v   69 (69)
T d1yvca1          15 AGKEYEVTIEDMG-KGGDGIARID--GFVVFV-PNAEKGSVINVKVTAVKEKFAFAERV   69 (69)
T ss_dssp             TTCEEEEECCEEC-TTSCEEEEET--TEEEEE-TTCCTTCEEEEEEEEECSSCEEEEEC
T ss_pred             CCCEEEEEEEECC-CCCCEEEEEC--CEEEEE-CCCCCCCEEEEEEEEECCCCEEEEEC
T ss_conf             9999999999877-8986999989--999994-99889999999999952885999989


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: TRAM domain
domain: Hypothetical protein MMP0076
species: Methanococcus maripaludis [TaxId: 39152]