HHsearch alignment for GI: 255764473 and conserved domain: PRK04284
>PRK04284 ornithine carbamoyltransferase; Provisional.
Probab=100.00 E-value=0 Score=658.79 Aligned_cols=301 Identities=36% Similarity=0.596 Sum_probs=281.8
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 87717844589999999999999999665236665443798799994288835789999898634754333321000012
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLG 84 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~ 84 (306)
T Consensus 6 ~rh~l~~~dls~~ei~~il~~A~~~k~~~~~~~~~~~L~gk~v~~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~s~~~ 85 (332)
T PRK04284 6 NRSFLTLLDFSRQEVEFLLTLSEDLKRAKYAGTEKPMLKGKNIALLFEKDSTRTRCAFEVAAHDQGAHVTYLGPTGSQMG 85 (332)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 88868711089999999999999997555458878678999899996379720699999999985996898488645278
Q ss_pred CCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCEEEECCC-
Q ss_conf 321079999975300101112101320067763012441240433320246787655766420013-367730461045-
Q gi|255764473|r 85 RAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGS-VKGKLFSWSGDG- 162 (306)
Q Consensus 85 kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~-l~~~~i~~vGd~- 162 (306)
T Consensus 86 kgEsi~DT~~vls~~~D~iv~R~~~~~~~~~~a~~s~vPViNg~~~~~HPtQ~L~D~~Ti~E~~~~~~~~lkva~vGD~~ 165 (332)
T PRK04284 86 KKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKPYADINFTYVGDGR 165 (332)
T ss_pred CCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
T ss_conf 87789999999996288899953461899999986799988689987772689988899999713665672899967988
Q ss_pred CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHH----HHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHH--H
Q ss_conf 55543101001233125765200001321000024----32013322213664663068733222100000022013--3
Q gi|255764473|r 163 NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNW----ARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKA--R 236 (306)
Q Consensus 163 ~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~----~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~--~ 236 (306)
T Consensus 166 nnVa~S~~~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~av~~aDviytd~w~s~~~~~~~~~~ 245 (332)
T PRK04284 166 NNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKE 245 (332)
T ss_pred CCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEEEECCCCHHHHHH
T ss_conf 65115799999975993799758555889999999999999719908995149888525889987644315770355788
Q ss_pred HHHCCCCCCCCHHHHHCCC-CCCEEECCCCCC-----------------CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3100111233688996289-872992599987-----------------4873576796799710686877559999999
Q gi|255764473|r 237 EEHVFQPFQVNLSLMSMAH-PDALFMHCLPAH-----------------RGEEVINEVLDGPQSVVFDEAENRLHTQKAI 298 (306)
Q Consensus 237 ~~~~~~~y~i~~~~l~~a~-~~~~vmHplP~~-----------------rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~Ai 298 (306)
T Consensus 246 r~~~~~~y~v~~elm~~~~~~~~ifmHcLPa~~~~~~~~g~~~~~~~~~Rg~EIt~eV~d~~~S~if~QAeNrl~~~~Al 325 (332)
T PRK04284 246 RIELLKPYQVTKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGLREMEVTDEVFESKASVVFQEAENRMHTIKAV 325 (332)
T ss_pred HHHHHHCCEECHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCEECHHHHCCCCCEEHHHHHCCHHHHHHH
T ss_conf 88664174773999974589894997888888754432230000034886868778895798740010854409999999
Q ss_pred HHHHHCC
Q ss_conf 9996255
Q gi|255764473|r 299 LLWCFGI 305 (306)
Q Consensus 299 L~~~lG~ 305 (306)
T Consensus 326 L~~~LG~ 332 (332)
T PRK04284 326 MVATLGE 332 (332)
T ss_pred HHHHHCC
T ss_conf 9997088