HHsearch results for GI: 255764473 and protein with PDBid: 1js1_X
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=100.00 E-value=0 Score=598.68 Aligned_cols=288 Identities=25% Similarity=0.340 Sum_probs=260.9
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--
Q ss_conf 877178445899999999999999996652366654437987999942888357899998986347543333210000--
Q gi|255764473|r 5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQ-- 82 (306)
Q Consensus 5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss-- 82 (306)
|||||+++||+ +|..|+++|.++|+.+.+. ...|+||+++++|+|||||||+|||+|+++|||++++++.++|+
T Consensus 1 Mk~~i~i~Dls--di~~ll~~a~~~k~~~~~~--~~~l~gK~va~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~~ 76 (324)
T 1js1_X 1 MKKFTCVQDIG--DLKSALAESFEIKKDRFKY--VELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWK 76 (324)
T ss_dssp CCCBSSGGGGC--CHHHHHHHHHHHHHSTTTT--TTTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEECCGGGCC
T ss_pred CCCCCCHHHHH--HHHHHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 98747523389--9999999999998374435--6557998899996789712699999999984996997378876321
Q ss_pred ----------CCCCCCHHHHHHHHHHCCCEEEEEECCC----------CHHHHHHCCCCCCEECCCCCCCHHHHHHHHHH
Q ss_conf ----------1232107999997530010111210132----------00677630124412404333202467876557
Q gi|255764473|r 83 ----------LGRAETIGDTAKVLSRYVDAIVMRTTNH----------SRLLELTEYATVPVINALTDNTHPCQIIADIM 142 (306)
Q Consensus 83 ----------~~kgEsl~Dt~~~ls~~~D~iviR~~~~----------~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~ 142 (306)
.+||||++||++++|+|+|+||+|++++ ..+.++++++++|||||+++.+||||+|+|+|
T Consensus 77 ~~~~~~~~~~~~k~Es~~DT~~vls~~~D~iv~R~~~~~~~~~~~~~~~~~~~~a~~s~vPViNg~~~~~HPtQaL~Dl~ 156 (324)
T 1js1_X 77 LETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLI 156 (324)
T ss_dssp EECCSSCCCCSSCCEEHHHHHHHHHHTCSEEEEECCCCSSCHHHHHHTHHHHHHHHHSSSCEEESSCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHH
T ss_conf 23454300037777649999999986164258873221343431000579999998527853478887667689999999
Q ss_pred HHHHHCCCCCCCCEEEECC-----CCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCC
Q ss_conf 6642001336773046104-----55554310100123312576520000132100002432013322213664663068
Q gi|255764473|r 143 TFEEHRGSVKGKLFSWSGD-----GNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKG 217 (306)
Q Consensus 143 Ti~e~~g~l~~~~i~~vGd-----~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~ 217 (306)
||+|++|.+++++++++|+ ++||++|++.++.++|+++.+++|+++.+++.... .+.+++|+.+++++
T Consensus 157 Ti~e~~g~~~~~~~~~~~~~~~~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~-------~~~~~~d~~~a~~~ 229 (324)
T 1js1_X 157 TIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVG-------NARVEYDQMKAFEG 229 (324)
T ss_dssp HHHHHCSSSSCEEEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHT-------TCEEESCHHHHHTT
T ss_pred HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHCC-------CCEECCCHHHHHCC
T ss_conf 99996376556538999843885401047899999985597645314764465301113-------51221117766337
Q ss_pred CCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 73322210000002201333100111233688996289872992599987487357679679971068687755999999
Q gi|255764473|r 218 AHCVFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKA 297 (306)
Q Consensus 218 aD~V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~A 297 (306)
||+||+++|++|+.+.......++.+||+|.++|+ ++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||
T Consensus 230 aDvV~t~~~~~~~~~~~~~~~~~~~~y~v~~~ll~-~~~dai~MHpLP~~Rg~EIs~eV~d~p~S~if~QaeNgl~~rmA 308 (324)
T 1js1_X 230 ADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMA-VTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATV 308 (324)
T ss_dssp CSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHT-TSSSCEEECCSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCHHHHHHHHHCCCEECHHHHC-CCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHCCHHHHHH
T ss_conf 76689988886367307779987418725499874-79999997999998886637767568987299998620999999
Q ss_pred HHHHHHC
Q ss_conf 9999625
Q gi|255764473|r 298 ILLWCFG 304 (306)
Q Consensus 298 iL~~~lG 304 (306)
||+|+|.
T Consensus 309 lL~~lL~ 315 (324)
T 1js1_X 309 VLKRLLE 315 (324)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999984