HHsearch results for GI: 255764473 and protein with PDBid: 1vlv_A

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, JCSG, protein structure initiative, PSI; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=100.00  E-value=0  Score=635.58  Aligned_cols=299  Identities=39%  Similarity=0.649  Sum_probs=280.4

Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             87717844589999999999999999665236665443798799994288835789999898634754333321000012
Q gi|255764473|r    5 PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQLG   84 (306)
Q Consensus         5 ~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~~   84 (306)
                      +||||+++||++++|..||++|.++|..+.+....+.|+||+++++|+|||||||+|||+|+++|||+++++++.+||++
T Consensus        19 gk~llsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~~~~~~ss~~   98 (325)
T 1vlv_A           19 GRSLLTLLDFSPEEIRYLLDISKQVKMENRSKLRTERFKGMTLAMIFEKRSTRTRLAFETAFAEEGGHPIFLSPNDIHLG   98 (325)
T ss_dssp             TCCBSCGGGSCHHHHHHHHHHHHHHHHHHHHTCCCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCCTT
T ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf             99808511089999999999999997642247776457998899985689753789999999983985897466433567


Q ss_pred             CCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC-C
Q ss_conf             321079999975300101112101320067763012441240433320246787655766420013367730461045-5
Q gi|255764473|r   85 RAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDG-N  163 (306)
Q Consensus        85 kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd~-~  163 (306)
                      ||||++||++++++|+|++|+||+.++.+.++++++++|||||+++++||||+|+|+|||+|++|.++|++|+|+||. +
T Consensus        99 kgEsl~Dt~~~ls~y~D~ivvR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLlDl~Ti~e~~g~l~gl~i~~vGd~~~  178 (325)
T 1vlv_A           99 AKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIEENFGRLKGVKVVFMGDTRN  178 (325)
T ss_dssp             TSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTS
T ss_pred             CCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCC
T ss_conf             88536899999985165157740442046666650676414178887778999999999999839745677257668755


Q ss_pred             CCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHH----HCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHH-HHH
Q ss_conf             55431010012331257652000013210000243----2013322213664663068733222100000022013-331
Q gi|255764473|r  164 NILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWA----RNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKA-REE  238 (306)
Q Consensus       164 ~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~----~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~-~~~  238 (306)
                      ++++|++.+++++|+++.+++|+++.|++......    ...+..+.+++++.++++++|+||+++|++++++... ...
T Consensus       179 ~~~~s~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aDvvyt~~~~~~~~~~~~~~~~  258 (325)
T 1vlv_A          179 NVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERM  258 (325)
T ss_dssp             HHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CH
T ss_pred             CEEEHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEECCHHHHHCCCCEEEEHHHHHHHHHHHHHHHH
T ss_conf             37531999999759849997384338888999987655442376420106999997069866401666754546668998


Q ss_pred             HCCCCCCCCHHHHHC-CCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             001112336889962-89872992599987487357679679971068687755999999999962
Q gi|255764473|r  239 HVFQPFQVNLSLMSM-AHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCF  303 (306)
Q Consensus       239 ~~~~~y~i~~~~l~~-a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~l  303 (306)
                      .++++||||.++|+. +|++++||||||+|||.||+++|+++|+|+||+||+||+|+|||||+++|
T Consensus       259 ~~~~~y~v~~~~l~~~ak~~~i~mHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vr~AlL~~lL  324 (325)
T 1vlv_A          259 ALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIEGKQSRVWDEAENRKHTIKAVMIATL  324 (325)
T ss_dssp             HHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCCCEECHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             760375056999972189998996998489984828878569987399998725999999999986